ID:

dsi_202

 Coordinate:

2l:17243-17328 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.4 -11.2 -11.1

Flybase annnotation

exon [2l_16693_17996_-]; three_prime_UTR [2l_16693_17828_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################
CAAGAGCGCATTTAGGTATTAGGCTAATTTAATTTTTTGTTTACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTTCCCTTTCACCACTTAAACTGCGTACTTTTAATTAAAATATTGTCAAAGCCAAATTGGTATTGGGTTTGGGTGCATTAAGATTAACCAG
***********************************((((........((((.(((((.(((.((....((((.((......((...(((....)))....))......)).))))..)))))))))).)))).........)))).....************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 M025
embryo
 GSM343915
embryo
 O001
Testis
 O002
Head
 SRR553488
RT_0-2 hours eggs
..................................................TAAAGAGATACAGCTGAATTTATG................................................................................................................ 24 0 1 525.00 525 427 32 24 41 1 0 0
..................................................TAAAGAGATACAGCTGAATTTATGTA.............................................................................................................. 26 0 1 103.00 103 48 33 21 1 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGTAT............................................................................................................. 27 0 1 101.00 101 74 25 1 1 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTAAAA................................................... 25 0 1 99.00 99 97 2 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGT............................................................................................................... 25 0 1 77.00 77 63 11 2 1 0 0 0
..........................................................................................................................................TGTCAAAGCCAAATTGGTATTGGGT....................... 25 0 1 65.00 65 65 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGGTTTGGG.................. 26 0 1 43.00 43 43 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTAAAATA................................................. 27 0 1 38.00 38 38 0 0 0 0 0 0
.........................................................................................................................................TTGTCAAAGCCAAATTGGTATTGGGT....................... 26 0 1 28.00 28 28 0 0 0 0 0 0
..........................................................................................................................................TGTCAAAGCCAAATTGGTATTGGGTT...................... 26 0 1 23.00 23 23 0 0 0 0 0 0
.............................................................................TATTAGATTGGCACAAGCCTTCCCTT................................................................................... 26 0 1 20.00 20 15 4 0 0 1 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCCTTT.................................................................................. 25 0 1 19.00 19 16 3 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGTATTGGG........................ 27 0 1 19.00 19 16 3 0 0 0 0 0
..................................................TAAAGAGATACAGCTGA....................................................................................................................... 17 0 1 16.00 16 16 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGTATTGGGT....................... 28 0 1 15.00 15 14 0 1 0 0 0 0
.............................................................................TATTAGATTGGCACAAGCCTTCCCT.................................................................................... 25 0 1 14.00 14 11 2 0 0 1 0 0
.............................................................................TATTAGATTGGCACAAGCCTTCCCTTT.................................................................................. 27 0 1 13.00 13 12 1 0 0 0 0 0
................................................................................................................................................AGCCAAATTGGTATTGGGTTTGGG.................. 24 0 1 13.00 13 12 1 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTT........................................................................................ 19 0 1 13.00 13 13 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTAAAATAT................................................ 28 0 1 12.00 12 12 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATT.................................................................................................................... 20 0 1 12.00 12 12 0 0 0 0 0 0
..........................................................................TATTATTAGATTGGCACAAGCCTT........................................................................................ 24 0 1 11.00 11 9 0 0 2 0 0 0
..................................................TAAAGAGATACAGCTGAATTTAT................................................................................................................. 23 0 1 11.00 11 9 2 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGTATT............................................................................................................ 28 0 1 11.00 11 9 1 1 0 0 0 0
.............................................................................TATTAGATTGGCACAAGCCTT........................................................................................ 21 0 1 11.00 11 11 0 0 0 0 0 0
..................................................TAAAGAGATACAGCT......................................................................................................................... 15 0 2 10.50 21 21 0 0 0 0 0 0
.........................................................................................................................................TTGTCAAAGCCAAATTGGTATTGGGTT...................... 27 0 1 10.00 10 10 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGTATTGG......................... 26 0 1 10.00 10 10 0 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCCTTTC................................................................................. 26 0 1 10.00 10 2 7 0 1 0 0 0
...............................................................................TTAGATTGGCACAAGCCT......................................................................................... 18 0 1 9.00 9 9 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTAAAAT.................................................. 26 0 1 9.00 9 9 0 0 0 0 0 0
...............................................................................................................TAAACTGCGTACTTTTAATTAAAA................................................... 24 0 1 8.00 8 5 3 0 0 0 0 0
CAAGAGCGCATTTAGGTATTAGGC.................................................................................................................................................................. 24 0 1 7.00 7 7 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAAT..................................................................................................................... 19 0 1 7.00 7 5 0 0 0 1 1 0
.............................................................................TATTAGATTGGCACAAGCCTTCCC..................................................................................... 24 0 1 7.00 7 3 4 0 0 0 0 0
...............................................................................................................................................AAGCCAAATTGGTATTGGGTTTGGG.................. 25 0 1 6.00 6 6 0 0 0 0 0 0
..................................................................................................................................................CCAAATTGGTATTGGG........................ 16 0 1 6.00 6 6 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTA.......................................................... 18 0 1 6.00 6 6 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAA...................................................................................................................... 18 0 1 6.00 6 6 0 0 0 0 0 0
............................................................................TTATTAGATTGGCACAAGCCTTCCCTT................................................................................... 27 0 1 6.00 6 2 4 0 0 0 0 0
.AAGAGCGCATTTAGGTA........................................................................................................................................................................ 17 0 1 6.00 6 6 0 0 0 0 0 0
.................................................................................................................................................GCCAAATTGGTATTGGGT....................... 18 0 1 6.00 6 6 0 0 0 0 0 0
................................................................................................................................................AGCCAAATTGGTATTGGGTTTGGGT................. 25 0 1 5.00 5 5 0 0 0 0 0 0
.................................................................................................................................................GCCAAATTGGTATTGGG........................ 17 0 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................................................................TTGTCAAAGCCAAATTGGTATTGGG........................ 25 0 1 5.00 5 5 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGGT....................... 21 0 1 5.00 5 5 0 0 0 0 0 0
...........................................................ACAGCTGAATTTATGTA.............................................................................................................. 17 0 1 5.00 5 5 0 0 0 0 0 0
..........................................................................................................................................TGTCAAAGCCAAATTGGTATTGGG........................ 24 0 1 5.00 5 5 0 0 0 0 0 0
.............................................................................................................................................................TTGGGTTTGGGTGCATTAAGATTAACC.. 27 0 1 5.00 5 5 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTA.................................................................................................................. 22 0 1 5.00 5 1 0 3 0 1 0 0
............TAGGTATTAGGCTAATT............................................................................................................................................................. 17 0 1 5.00 5 5 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTG........................................................................................................................ 16 0 2 4.50 9 9 0 0 0 0 0 0
..........................................................................................................................................................GTATTGGGTTTTGATGCATT............ 20 2 2 4.50 9 1 7 1 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTC....................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAAT........................................................ 20 0 1 4.00 4 4 0 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCCT.................................................................................... 23 0 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................................................................................GGTATTGGGTTTTGATGCATT............ 21 2 2 4.00 8 0 8 0 0 0 0 0
.....................................TGTTTACATGTGATAAAGAGATACAGC.......................................................................................................................... 27 0 1 4.00 4 1 2 0 1 0 0 0
..........................................................................TATTATTAGATTGGCACAAGCCTTC....................................................................................... 25 0 1 4.00 4 3 1 0 0 0 0 0
................................................................................TAGATTGGCACAAGCCTTCCCTTTC................................................................................. 25 0 1 4.00 4 0 4 0 0 0 0 0
....................................................................................TTGGCACAAGCCTTCCCTTTCACCACT........................................................................... 27 0 1 4.00 4 0 4 0 0 0 0 0
.............................................TGTGATAAAGAGATACAGCTGAATT.................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0 0 0
...........................................................ACAGCTGAATTTATGTAT............................................................................................................. 18 0 1 4.00 4 4 0 0 0 0 0 0
................................................................................................................................................AGCCAAATTGGTATTGGGT....................... 19 0 1 4.00 4 4 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGG........................ 20 0 1 3.00 3 3 0 0 0 0 0 0
..................................................................................................................................TAAAATATTGTCAAAGCCAAATTGGTA............................. 27 0 1 3.00 3 1 2 0 0 0 0 0
........................................................GATACAGCTGAATTTATGT............................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTT............................................................. 15 0 2 3.00 6 6 0 0 0 0 0 0
.................................................................................................................................TTAAAATATTGTCAAAGCCAAATTGG............................... 26 0 1 3.00 3 2 1 0 0 0 0 0
...............................................TGATAAAGAGATACAGCTGAATTTA.................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0 0
................................................................................TAGATTGGCACAAGC........................................................................................... 15 0 1 3.00 3 3 0 0 0 0 0 0
..............................................................................ATTAGATTGGCACAAGCCTTCCCT.................................................................................... 24 0 1 3.00 3 2 1 0 0 0 0 0
...............................................................................................................................................AAGCCAAATTGGTATTGGGT....................... 20 0 1 3.00 3 3 0 0 0 0 0 0
.............................................................................TATTAGATTGGCACAAGC........................................................................................... 18 0 1 3.00 3 3 0 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCC..................................................................................... 22 0 1 3.00 3 2 1 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCCTT................................................................................... 24 0 1 3.00 3 1 2 0 0 0 0 0
...............................................................................................................................................AAGCCAAATTGGTATTGGGTT...................... 21 0 1 3.00 3 3 0 0 0 0 0 0
...................................................AAAGAGATACAGCTGAATTTATG................................................................................................................ 23 0 1 3.00 3 0 3 0 0 0 0 0
....................................................................................................................................................AAATTGGTATTGGGTT...................... 16 0 1 3.00 3 3 0 0 0 0 0 0
....................................................................................................................................................AAATTGGTATTGGGT....................... 15 0 1 3.00 3 3 0 0 0 0 0 0
........................................................................TGTATTATTAGATTGGCACAAGCCTT........................................................................................ 26 0 1 3.00 3 2 0 0 1 0 0 0
.......................................................................................................................................................TTGGTATTGGGTTTGGGTGCA.............. 21 0 1 3.00 3 3 0 0 0 0 0 0
............................................................................TTATTAGATTGGCACAAGCCTTCCC..................................................................................... 25 0 1 3.00 3 1 2 0 0 0 0 0
..............................................................................ATTAGATTGGCACAAGCCTTCCCTTT.................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0 0
...........................................................................................................................................................TATTGGGTTTGGGTGCATTAAGAT....... 24 0 1 3.00 3 3 0 0 0 0 0 0
............................................................................TTATTAGATTGGCACAAGCCTTCCCT.................................................................................... 26 0 1 3.00 3 1 2 0 0 0 0 0
....................................TTGTTTACATGTGATAAAGAGATACAGC.......................................................................................................................... 28 0 1 3.00 3 2 0 1 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTT........................................................... 17 0 1 3.00 3 3 0 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGC........................................................................................... 16 0 1 3.00 3 3 0 0 0 0 0 0
................................................................................TAGATTGGCACAAGCCT......................................................................................... 17 0 1 3.00 3 3 0 0 0 0 0 0
..................................................................................................................................TAAAATATTGTCAAAGCCAAATTGG............................... 25 0 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................................................................TTGGTATTGGGTTTGGGTGCATTAAGA........ 27 0 1 3.00 3 2 0 1 0 0 0 0
..............................................................................ATTAGATTGGCACAAGCCT......................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0
...........................................................ACAGCTGAATTTATGT............................................................................................................... 16 0 3 2.33 7 7 0 0 0 0 0 0
.......................................................................................................TCACCACTTAAACTGCGTACTTTTAA......................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGG............................... 20 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................................................................................TTGGGTGCATTAAGATTAACCAG 23 0 1 2.00 2 2 0 0 0 0 0 0
...................................................TAAGAGATACAGCTGAATTTATG................................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................................................................................TTGGGTTTGGGTGCATTAAGATTAAC... 26 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGTATT........................... 24 0 1 2.00 2 1 0 1 0 0 0 0
.........................................................ATACAGCTGAATTTATGT............................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTAAATTTATG................................................................................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0
CAAGAGCGCATTTAGGTATTAGGCTAA............................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTAAA.................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
.............................................TGTGATAAAGAGATACAGCTGAATTT................................................................................................................... 26 0 1 2.00 2 1 0 0 0 0 0 1
...................................................................................................................................................CAAATTGGTATTGGGT....................... 16 0 1 2.00 2 2 0 0 0 0 0 0
.........................................TACATGTGATAAAGAGATACAGCTGAA...................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0
................................................GATAAAGAGATACAGCTGAATT.................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0
........................................................................................................................................ATTGTCAAAGCCAAATTGGTATTGGGT....................... 27 0 1 2.00 2 1 1 0 0 0 0 0
..........................................................................................................................CTTTTAATTAAAATATTGTC............................................ 20 0 1 2.00 2 2 0 0 0 0 0 0
.AAGAGCGCATTTAGGTATTAGGC.................................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TTAAGAGATACAGCTGAATTTATG................................................................................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................GCGTACTTTTAATTAAAATATTGTC............................................ 25 0 1 2.00 2 0 1 0 0 1 0 0
..................................................TAAAGAGATACAGCTGAATTT................................................................................................................... 21 0 1 2.00 2 1 0 0 1 0 0 0
.AAGAGCGCATTTAGG.......................................................................................................................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0
.............................................TGTGATAAAGAGATACAGCTGAAT..................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................................................................CAAAGCCAAATTGGTATTGGGTTTG.................... 25 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................TATTAGATTGGCACAAG............................................................................................ 17 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................GCGTACTTTTAATTAAAA................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGC............................................................................................................... 25 1 1 2.00 2 0 0 2 0 0 0 0
.AAGAGCGCATTTAGGT......................................................................................................................................................................... 16 0 1 2.00 2 2 0 0 0 0 0 0
............................................................................................................................................TCAAAGCCAAATTGGTATTGGGTTTGGG.................. 28 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................................................................TTGGTATTGGGTTTGGGTGCATTAAG......... 26 0 1 2.00 2 1 1 0 0 0 0 0
...................................................AAAGAGATACAGCTGAATTTATGT............................................................................................................... 24 0 1 2.00 2 1 1 0 0 0 0 0
................................................................................................................................................AGCCAAATTGGTATTGGGTTTGGGTG................ 26 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................................................TTGTCAAAGCCAAATTGGTATTGG......................... 24 0 1 2.00 2 2 0 0 0 0 0 0
...................TAGGCTAATTTAATTTTTTGTTTACATG........................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0
................................................................................................TTCCCTTTCACCACTTAAACTGCGTAC............................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0
.............................................................................TATTAGATTGGCACAAGCCTTCC...................................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0
................................................................................................TTCCCTTTCACCACTTAAACTGCGTACT.............................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATT................................................................................................................ 24 1 1 2.00 2 1 1 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAA................................... 16 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................TAAACTGCGTACTTTTAATTAAAATA................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0
........................................................................................................CACCACTTAAACTGCGTACTTTTAAT........................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0
............................................................................TTATTAGATTGGCACAAGCCTTCCCTTT.................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATTTA.............................................................................................................. 26 1 1 2.00 2 1 0 1 0 0 0 0
..AGAGCGCATTTAGGTATTAGGCTAA............................................................................................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0 0
...........................................................................................................................................GTCAAAGCCAAATTGGTATTGGGT....................... 24 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGGTTTG.................... 24 0 1 2.00 2 2 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATA................................................................................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................TATTAGATTGGCACAAGCCT......................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGGTT...................... 22 0 1 2.00 2 2 0 0 0 0 0 0
............................................................................................................................................................ATTGGGTTTGGGTGCA.............. 16 0 1 2.00 2 2 0 0 0 0 0 0
.............................................TGTGATAAAGAGATACAGCCGAATT.................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
.............................................................................TATTAGATTGGCACAAGCC.......................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................................TGCGTACTTTTAATTAAAA................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................GCTGAATTTATGTAT............................................................................................................. 15 0 2 1.50 3 3 0 0 0 0 0 0
..........................................................................................................................................................GTATTGGGTTTTGGTGCA.............. 18 1 2 1.50 3 2 1 0 0 0 0 0
.........................................................................................................................................................GGTATTGGGTTTTGGTGCA.............. 19 1 2 1.50 3 3 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTT............................................................ 16 0 2 1.50 3 3 0 0 0 0 0 0
.............................................................................................................................................CAAAGCCAAATTGGTATTGGGTT...................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................TATTATTAGATTGGCACAAGCCTTCCC..................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
........................................TTACATGTGATAAAGAGATACAGC.......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAACGAGATACAGCTGAATTTATG................................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0
.............................................TGTGATAAAGAGATACAG........................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0
......................................................................................................................................................ATTGGTATTGGGTTTGGGTGC............... 21 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................................................AATTGGTATTGGGTTTGGGT................. 20 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATGCAGCTGAATTTATGTT.............................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGT.............................. 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................GATAAAGAGATACAGCTGAAT..................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................GATTGGCACAAGCCTTCCCTTTCA................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCCTTTCAC............................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
.................................................TTAAAGAGATACAGCTGAATTTATG................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0
............................................ATGTGATAAAGAGATACAGCTG........................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................ATTAGATTGGCACAAGCCTTCCC..................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.........................................TACATGTGATAAAGAGATACAGCTGAAT..................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................TTGTCAAAGCCAAATTGG............................... 18 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTAGG................................................................................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................................................................................................................TTTGGGTGCATTAAGA........ 16 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGTTT............................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0
..................................................TAAAAAGATACAGCTGAATTTATG................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGTA............................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................................TGTGATAAAGAGATACAGCTGAATTTA.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
..........................................ACATGTGATAAAGAGATACAGC.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................TGTCAAAGCCAAATTGGTATTG.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0
...................................................AAAGAGATACAGCTGAATTTAT................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0
..................................................TCAAGAGATACAGCTGAATTTATGT............................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................TGCATTAAGATTAACC.. 16 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTGTTGGGTTTGGG.................. 26 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTAA..................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................TATTATTAGATTGGCACAAGCCC......................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TTAAGCTGCGTACTTTTAATTAAAA................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAGGAGATACAGCTGAATTTATG................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGATGAATTTATGTAT............................................................................................................. 27 1 1 1.00 1 0 0 0 1 0 0 0
............................................................................................................................TTTAATTAAAATATTGT............................................. 17 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGA............................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................TACAGCTGAATTTATGTATAAAGAGA...................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................GCGTACTTTTAATTAAAATAA................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................TATCAAAGCCAAATTGGTATTGGG........................ 24 1 1 1.00 1 1 0 0 0 0 0 0
............................................ATGTGATAAAGAGATACAGCTGAA...................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..AGAGCGCATTTAGGTATT...................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGG............................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0
.AAGAGCGCATTTAGGTAT....................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................TGTATTATTAGATTGGCACAAGCCTTC....................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGTATTTATGTAT............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................TACAGCTGAATTTATGTA.............................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTCAAG................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTAACT................................................................................................................ 24 3 1 1.00 1 0 0 1 0 0 0 0
............................................................................TTATTAGATTGTCACAAGCCTTCCCT.................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0
CAAGAGCGCATTTAGGTATTAGG................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..AGAGCGCATTTAGGTATTAGG................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................CAGCTGAATTTATGTAT............................................................................................................. 17 0 2 1.00 2 2 0 0 0 0 0 0
.................................................................................AGATTGGCACAAGCCTTCCCTTTC................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................TAAACTGCGTACTTTTAATTAAA.................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCC...................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................TATGTATTATTAGATTGGCACAAG............................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
...................................................AAAGAGATACAGCTGAATTTATGTA.............................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................TAGATTGGCACAAGCCTTCCCTTT.................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
...................................................AAAGAGATACAGCTGAATTTATGTAT............................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................AAACTGCGTACTTTTAATTAAAAT.................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................TGCGTACTTTTAATTAAAATATTGTCAA.......................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................TTGGGTGCATTAAGA........ 15 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................TATTGGGTTTGGGTGCA.............. 17 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................TGCGTACTTTTAATTAAAAT.................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................TCACCACTTAAACTGCGTACTTTT........................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................AGAGATACAGCTGAATTTATGTA.............................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................GCCAAATTGGTATTGGGTTTGGG.................. 23 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................TGGTATTGGGTTTGGGTTCAT............. 21 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................TATTGGGTTTGGGTGCATTAAGATT...... 25 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................AAGCCTTCCCTTTCACCACT........................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................TCAAAGCCAAATTGGTATTGGGTT...................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................AATTGGTATTGGGTTTGGGTG................ 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................TGGGTTTGGGTGCATTAAGA........ 20 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................CTAAACTGCGTACTTTTAATTAAAA................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
...............................................TGATAAAGAGATACAGCTGAA...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................GCGTAATTTTAATTAAAATATTGTC............................................ 25 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGGTTTGTC.................. 26 2 1 1.00 1 1 0 0 0 0 0 0
..AGAGCGCATTTAGGTATTAGGC.................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................TATTAGCTTGGCACAAGCCTTCCC..................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................TAAACTGCGTACTTTTAAT........................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAATTA...................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................AGCCAAATTGGTATAGGGTTTAGG.................. 24 2 1 1.00 1 1 0 0 0 0 0 0
................................................GATAAAGAGATACAGCTGAATTTA.................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTACTTTTAACTT...................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
...........................................................ACAGCTGAATTTATGTATT............................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TTAGATTGGCACAAGCCTTCCCTTTA................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................TGGTATTGGGTTTGGGTGCAA............. 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................CACCACTTAAACTGCG.................................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................TCGGGTTTGGGTGCATTAAGATTAAC... 26 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................AAAGCCAAATTGGTATTGGGTTTGG................... 25 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTATGTATA............................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................ATTGGCACAAGCCTT........................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTAAGTAT............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0
...................TAGGCTAATTTAATTTTTTGT.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................TACAGCTGAATTTATGTATTATT......................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................TTGTCAAAGCCAAATTGGTATTTGGGC...................... 27 3 1 1.00 1 1 0 0 0 0 0 0
................................................................................TAGATTGGCACAAGCCTTCCCT.................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TGAAGAGATACAGCTGAATTTATGT............................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
..........TTTAGGTATTAGGCTA................................................................................................................................................................ 16 0 2 1.00 2 2 0 0 0 0 0 0
...............................................................................ATAGATTGGCACAAGCCTTCCCTTT.................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................ATTGTCAAAGCCAAATTGGTATTGGG........................ 26 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................GCGTACTTTTAATTAAAATATT............................................... 22 0 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................TTAAACTGCGTACCTTTA.......................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................TATTGTCAAAGCCAAATTGGTATTGGAC....................... 28 2 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATA.................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGGTACGGCTGAATTTATG................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGGATTTATG................................................................................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0
.............................................TGTGATAAAGAGATACA............................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TTAGATTGGCACAAG............................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TTAAACTGCGTGCTTTTAATTAAAATAT................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................CAAAGCCAAATTGGTATTGGGTTTGGG.................. 27 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................CTTTTAATTAAAATATTGTCAAAGCC...................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................................TTAGATTGGCACAGGCCTTCCCTT................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
...................................................AAAGAGATACAGCTGA....................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................ACCACTTAAACTGCGTA................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0
.........................................TACATGTGATAAAGAGATACA............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................TGTTTACATGTGATAAAGAGATACAG........................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................TGGTATTGGGTTTGGGTGCAAAAA.......... 24 2 1 1.00 1 1 0 0 0 0 0 0
...................TAGGCTAATTTAATTTTTTGTTTAC.............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................TTGGGTTTGGGTGCATT............ 17 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................GTCAAAGCCAAATTGGTATTGGG........................ 23 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TTCACCACTTAAACTGCGTACT.............................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.....................................TGTTTACATGTGACAAAGAGATACAGC.......................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................AGCCAAATTGGTATTGGGTTTTAA.................. 24 3 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTAG................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................CTGCGTACTTTTAATTAAA.................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................TTGGTATTGGGTTTGGGTGCATTA........... 24 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................TTCCCTTTCACCACTTAAACTGCG.................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
CAAGAGCGCATTTAGGTATTAG.................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................ATACAGCTGAATTTATGTAT............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TAAAGAGATACAGCTGAATTTACG................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TCAGATTGGCACAAGCCTTCCCTTT.................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................TGCGTACTTTTAATTAAAAAA................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................AAATTGGTATTGGGTTTG.................... 18 0 1 1.00 1 1 0 0 0 0 0 0
...................................................TAAGAGATACAGCTGAATTTATGTA.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
..................................................TAACGAGATACAGCTGAATTTATGTA.............................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0
..................................................TGAAGAGATACAGCTGAATTTATG................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
......................................GTTTACATGTGATAAAGAGATACAGC.......................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................ACCACTTAAACTGCGTACTTTTAAT........................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TTCACCACTTAAACTGCGTACTTTTA.......................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
............TAGGTATTAGGCTAATTTA........................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................TGCATTAAGATTAACCAG 18 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................TTGGTATTGGGTTTGGGTGTTTTA........... 24 2 1 1.00 1 1 0 0 0 0 0 0
........................................................GATACAGCTGAATTTAT................................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................AAATTGGTATTGGGTTTGGG.................. 20 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................GCACAAGCCTTCCCTTT.................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................TATTGGGTTTGGGTGCATTAAGATTAACC.. 29 0 1 1.00 1 0 1 0 0 0 0 0
..................TTAGGCTAATTTAATTTTTTGT.................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TTAAGAGATACAGCTGAATTTATGT............................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
....................................................AAGAGATACAGCTGAAT..................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................ATTATTAGATTGGCACAAGCCTTCCC..................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0

Anti-sense strand reads

GTTCTCGCGTAAATCCATAATCCGATTAAATTAAAAAACAAATGTACACTATTTCTCTATGTCGACTTAAATACATAATAATCTAACCGTGTTCGGAAGGGAAAGTGGTGAATTTGACGCATGAAAATTAATTTTATAACAGTTTCGGTTTAACCATAACCCAAACCCACGTAATTCTAATTGGTC
************************************((((........((((.(((((.(((.((....((((.((......((...(((....)))....))......)).))))..)))))))))).)))).........)))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 M025
embryo
 O001
Testis
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
................................................................................................AAGGGAAAGTGGTGAATTTGACGC.................................................................. 24 0 1 121.00 121 121 0 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATTTGACGC.................................................................. 23 0 1 49.00 49 49 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTAAATT.......................................................................................................................................................... 27 0 1 18.00 18 14 4 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAAGTGGT............................................................................. 27 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTAAAT........................................................................................................................................................... 26 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0
...................................................................................................GGAAAGTGGTGAATTTGACGC.................................................................. 21 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTG...................................................................... 20 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAAGT................................................................................ 24 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0
..........................................................................................GTTCGGAAGGGAAAGTGGTGAATT........................................................................ 24 0 1 9.00 9 4 5 0 0 0 0 0 0 0 0
...............................................................................................GAAGGGAAAGTGGTGAATTTGACGC.................................................................. 25 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0
..................................................................................................GGGAAAGTGGTGAATTTGACGC.................................................................. 22 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTAATTTTATAACAGTTTCGGTT.................................... 23 0 1 7.00 7 0 1 6 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAA................................................................................... 21 0 1 6.00 6 5 0 0 0 1 0 0 0 0 0
......................................................................................................AAGTGGTGAATTTGACGCATGAAAAT.......................................................... 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTGACGCAT................................................................ 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
..................................AAAACAAATGTACACTATTTCTCTAT.............................................................................................................................. 26 0 1 5.00 5 0 2 0 2 0 0 0 1 0 0
.................................................................................................AGGGAAAGTGGTGAATTTG...................................................................... 19 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................CGTGTTCGGAAGGGAAAGTGGTGAAT......................................................................... 26 0 1 4.00 4 1 1 0 0 2 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTAAATTA......................................................................................................................................................... 28 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATTTGACGCAT................................................................ 25 0 1 4.00 4 2 1 0 0 0 0 1 0 0 0
...CTCGCGTAAATCCATAATCCGATTAAA............................................................................................................................................................ 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...CTCGCGTAAATCCATAATCCGATTAAAT........................................................................................................................................................... 28 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
..........................................................................................................GGTGAATTTGACGCATGAAAA........................................................... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGA................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................CGTGTTCGGAAGGGAAAGTGG.............................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................................................................GTGTTCGGAAGGGAAAGTGGTGAAT......................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTGGTGAATTTGACGCATGAAAA........................................................... 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATT........................................................................ 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................AAGTGGTGAATTTGACGCATGAAA............................................................ 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAAGTGG.............................................................................. 26 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0
...................................AAACAAATGTACACTATTTCTCTAT.............................................................................................................................. 25 0 1 3.00 3 0 1 0 2 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAA.................................................................................. 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTGA..................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................................TAATTTTATAACAGTTTCGGTT.................................... 22 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0
....................................AACAAATGTACACTATTTCTCTAT.............................................................................................................................. 24 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0
....................................................................................................GAAAGTGGTGAATTTGACGC.................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................GGGAAAGTGGTGAATTTG...................................................................... 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................GTTCGGAAGGGAAAGTGG.............................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................AACCGTGTTCGGAAGGGAAAGTGG.............................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................TGAAGGGAAAGTGGTGAATTTGACGC.................................................................. 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...CTCGCGTAAATCCATAATCCGATTAAATT.......................................................................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................GAAAATTAATTTTATAACAGTTTCGGTT.................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
......................................CAAATGTACACTATTTCTCTAT.............................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................GGAAGGGAAAGTGGTGAAT......................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAAGTGGTGA........................................................................... 29 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.....CGCGTAAATCCATAATC.................................................................................................................................................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................AAAGTGGTGAATTTGACGCATGAAAAT.......................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................AACCGTGTTCGGAAGGGAAAGTGGTGA........................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................AGTGGTGAATTTGACGCATGAAAATT......................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGA........................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......GCGTAAATCCATAATCCGATTAAATT.......................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................TAAAAAACAAATGTACACTATTTCTCT................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................AAAAACAAATGTACACTATTTCTCTAT.............................................................................................................................. 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........................................................................................................GTGAATTTGACGCATGAAAA........................................................... 20 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0
.....CGCGTAAATCCATAATCCGATTAAA............................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTGACTC.................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................GGTGAATTTGACGCATGAAAATTAA....................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................GAAGGGAAAGTGGTGAATTTG...................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................AAAGGGAAAGTGGTGAATTTGACGC.................................................................. 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................TAATTTTATAACAGTTTCGGTTT................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTGACG................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATTT....................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ATAACAGTTTCGGTTTAA................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................GGGAAAGTGGTGAATTTGACGCACC............................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................ACACTATTTCTCTATGTCGACTTAAAT.................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................GGAAAGTGGTGAATT........................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGTGAAAGTGGT............................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................ATGGTGAATTTGACGCATGAAAA........................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................AAAGTGGTGAATTTGACGCATGAAAA........................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATTTGACG................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CCCAAACCCACGTAATTCTAATTG... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAAGGAAAGTGGTGAATTTGACGC.................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTTAACCATAACCCAAACCCACGTAATT.......... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................TGGTGAATTTGACGCATGAAAA........................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................AAATTAATTTTATAACAGTTTCGGTT.................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATTTGA..................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAAG................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATT............................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGATGAATTTGACGC.................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................GGGAAAGTGGTGAATTTGACGCAT................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTT....................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.TTCTCGCGTAAATCCATAATCCGATT............................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATT........................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTAATTTTATAACAGTTTCGGTTT................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................GGTGAATTTGACGCATGAAAATTAAT...................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................ATTAATTTTATAACAGTTTCGGTTT................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTATAACAGTTTCGGTTTAACCAT............................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TAACCATAACCCAAACCCACGTAA............ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................TGTTCGGAAGGGAAAGTGGTGAATTT....................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTATAACAGTTTCGGTTTAACCAT............................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................ATAACCCAAACCCACGTAATTCTAATT.... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...CTCGCGTAAATCCATAATC.................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................GAATTTGACGCATGAAAA........................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................GGGGAAAGTGGTGAATTTGACGC.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CGGTTTAACCATAACCCAAACCCACGTAA............ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................GTGTTCGGAAGGGAAAGTGGTGAATT........................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................GTTCGGAAGGGAAAGTGGTGA........................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................TTCGGAAGGGAAAGT................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTAATT........................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAA.......................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................CCGTGTTCGGAAGGGAAAGTG............................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................ACAAATGTACACTATTTCTCTATGTCGA......................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................CGGAAGGGAAAGTGGTGAATTTGACGC.................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTGACGT.................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTA.............................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................AAGTGGTGAATTTGACGCATGAAAA........................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....TCGCGTAAATCCATAATCCGATTAAAT........................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................TGAAGGGAAAGTGGTGAATTTGAC.................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ACAGTTTCGGTTTAACCAT............................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTGAATTTGACGC.................................................................. 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................ACCGTGTTCGGAAGGGAAAGT................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................AAGTGGTGAATTTGACGCATGAAAATT......................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................CGGAAGGGAAAGTGGTGAATT........................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................AAACAAATGTACACTATTTCACTAT.............................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTTTATAACAGTTTCGGTTTAACCATA............................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TACCCAAACCCACGTAATTCT........ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................ATAACAGTTTCGGTT.................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................ATAACCCAAACCCACGTAATTCTAATTG... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
GTTCTCGCGTAAATCCAT........................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AACAGAGAGTGGTGAATTTGACG................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................CAAGGGAAAGTGGTGAATTTGACGC.................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................GAAGGCAAAGTGGTGAATTTGACGC.................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................TTCGGAAGGGAAAGTGG.............................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................GGAAGGGAAAGTGGTGAATTTGACGC.................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATATGACGC.................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................TAGGGAAAGTGGTGAATTTGACG................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...CTCGCGTAAATCCATAATCCGATTAA............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................TGAAGCGAAAGTGGTGAATTTGACGC.................................................................. 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAATTTGACGCA................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
GTTCTCGCGTAAATCCATAAT..................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............TCCATAATCCGATTAAAT........................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...CTCGCGTAAATCCATAATCCGATTCAAT........................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................GGTGAATTTGACGCAT................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................CTAACCGTGTTCGGAAGGGAAAGTTAT............................................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................AAGTGGTGAATTTGACGCATGAAAATTAATT..................................................... 31 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..GCTCGCGTAAATCCATAATCCGATT............................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTAATTTTATAACAGTTTCGGT..................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................ATGAAAATTAATTTTATAACAGTTT......................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................TTTTAATTTTATAACAGTTTCGGTTT................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................CGCATGAAAATTAATTTTATAACAGTTT......................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGAT................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................CTTAAATACATAATAATCTAACCGTGT.............................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................TCTAACCGTGTTCGGAAGGGAA................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCG.................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TGTTCGGAAGGGAAAGTGGTGAAT......................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................AGTGGTGAATTTGACGCAT................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................CCGTGTTCGGCAGGGAAAGTG............................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTAACCATAACCCAAACCCACGTAA............ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................ACCCAAACCCACGTAATTCTA....... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......GCGTAAATCCATAATCCGATTAAAT........................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................GTCGACTTAAATACATAATAAT........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................CGCATGAAAATTAATTTT................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................GGGAAAGTGGTGAATTTGACG................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AACCGTGTTCGGAAGGGAAAGTGGT............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CGTGTTCGCAAGGGAAAGTGGTGCAT......................................................................... 26 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTAA............................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAATCCGATTAAATTAA........................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..TCTCGCGTAAATCCATAATCCGATTAAA............................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....CGCGTAAATCCATAA...................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................CCGTGTTCGGAAGGGAAAGTGG.............................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................TCTAACCGTGTTCGGAAGGGAAAGT................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................GTTCGGAAGGGAAAGTGGTGAATTT....................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................GAAGGGAAAGTGGTGAATTTGACGT.................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGCTAAAGTGGTGAATTTGACGC.................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AACAGTTTCGGTTTAACCAT............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................AACCGTGTTCGGAAGGGAAAGTGGTG............................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................AGGGAAAGTGGTGAATTTGACAC.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................CGACTTAAATACATAATAATCTAACCGT................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................ATGTACACTATTTCTCTAT.............................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................TGCCAAACAAATGTACACTATTTC................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................GGAAGGGAAAGTGGTGAATT........................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................AAAGGGAAAGTGGTGAATT........................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGCGAATTTGACGC.................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................GAAGGTAAAGTGGTGAATTTGACGC.................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTGAA.......................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................ACGGAAAGTGGTGAATTTG...................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
................................................................................................AAGGGAAAGTGGTAAATT........................................................................ 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTTTCGGTTTAACCAT............................. 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................TGAAGGGAAAGTGGTG............................................................................ 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................GGAAGGGAAAGTTGT............................................................................. 15 1 20 0.15 3 0 0 0 0 0 1 0 0 0 2
.........................................AGGTACACTATTTCT.................................................................................................................................. 15 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................TTAAATTTATAACAGTTTGTGT..................................... 22 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1
................................................................................................................TTTGACGCATGTGAATTA........................................................ 18 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0
................................AAAAAACAAATGCACGCT........................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:17193-17378 - dsi_202 CA-AGAGCGCATT-----TAGGTATTAGGCTAATTTA--ATTTTTTGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------TACTTTT---------AA---------------TTAAAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------TAACCAG-----------------------------
droSec2 scaffold_14:30964-31149 - CA-AGAGCGCATT-----TAGGTATTAGGCTAATTTA--ATTTTTTGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------TACTTTT---------AA---------------TTAAAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAAAT--------TAACCAG-----------------------------
dm3 chr2L:25902-26086 - CA-AGAACGCATT-----TAGGTATTAGGCTAATATA--ATTTTTTGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCTCAAGCCT----------------------------------------------CCTTTTTCCCACTTAAACTGCG---------TATTTTT---------AA---------------TGAAAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------TAACCAG-----------------------------
droEre2 scaffold_4929:52002-52187 - CA-ATAACGCATT-----TAAGTATTAGGCTAATATA--ACGTTTCGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTT---------------------------------------------CCTTTTTCCCATTTAAACTGCG---------TAGTTTT---------AA---------------TTACAATAC------TGTCAACGTTAAATTGG--T-----ATTGGGTTTGGGTGCGT-----------TAAGAT--------AAACAAT-----------------------------
droYak3 2L:20326-20509 - CA-AGAGCGCATT-----TAGATATTAGGCTAATATA--ACGTTTCGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACGAGCCTT---------------------------------------------CCTTTTTTCCATTTAAACTGCC---------TAGTTTT---------AA---------------TTACAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTCTAGGTGCAT-----------TAGGAT--------AAAC--G-----------------------------
droEug1 scf7180000409154:22542-22756 - CC-AGGCCGCATT-----TAGATATAAGGCTAATATA--TTTTTTCGTTTAACGTGTGATAAAGAGTTATAGCTGAATTTATGTATTATTAGATATGCGCAAGCCTTTG--GTCAA--------GT--CTTTCCTT--------------TTCCGTTTTTCCTTTTAAATGCCG---------AAGTTTTTGCTACAAAAG---------------TTAAAGTTA------CGTCGAACCCAAGATTA--T-----ATTGGAATTAGGTGCAT-----------CGGAAT--------AGAAAAG-----------------------------
droBia1 scf7180000301455:30525-30742 - GG-AAACCGCATT-----TAAAAATTAAGCTTGTACA--CTGTTTCGTTAAACGTGTGATAAAGAGTTACAGCTGAGTTTACGTATTATTATATGTGCACAAGTGTATA--TTCAC--------CGCTA-----------------------CCCTTTTTCCATTAAACTTGCG---------TCGCTTTTCTTTC---AA---------------TTAAAAAGT------TGTCGAACGCAAGTTGG--T-----ATTGGAATTGGGTGCAT-----------TGAAGT--------AGATAAGTTCTGATAACT-AT---------------
droTak1 scf7180000413017:544018-544227 + CACGGAACGCATT-----TAAAAATTAGGCTAGTATA--CTTTTTCGTTTAACTTGTGATAAAGAGTTACAGCTGAATTTATGTATTAATAGATGTGCAGAAGCCTTTA--ATCAC--------GT--GTT---------------------CCCTTTTTT------------------------ATTTT---------AATTA------------ATAAAGTGT------TTTTGAACGCAAGTC-------------GGAATTGGGTGCAT-----------TGAAA---------AGATAAGTTCTTATAACTTATTTTCGCACTCATTTG
droEle1 scf7180000490216:13622-13846 + GA-GGAACGCATT-----TAGTGATTAAGCTAATATA--TTTTTTCGTT-AACTTGTGATACAGAGTTACAATTGAATTTATCTAATATTAAACTTCCACAAGCCTTTTTAAAAAT--------GT--CCC---------------------CC-CTTTTCCTCAAGACTCGAAATTAATAT-GAGTTTT---------AT---------------TTAATGTGT------CGTCAGAGACC-TTTAA--T-----TTTCGTTTTTAATGCTCATAAATACATTTAAGATTTTTAAAAAAGGGAA-----------------------------
droRho1 scf7180000779252:104761-104954 + GC-GGAACGCATT-----TAGAGATTAGGCTAATATA--TTTTTTCGTTTAAGTTGTGATAAAGAGTTACAACTAAATTTATATATTATCAGATTTGCACAAGCCTTTTTGAAAAC--------AT--ACT---------------------CCCATTTTCCAATAAAATCGAA-------------------------AA---------------GAAAAGTTT------CGTCCAATCCAAAACGT--T-----GTTGGAATTGGGTGCTT-----------TGAAAC--------AAATAAG-----------------------------
droFic1 scf7180000453904:1458075-1458251 - CACGGAAAGCATT-----TAGAGATTAGCCTAATGTA--CTTTTTTGTTTCACTTGTGATAAAGAGTTACAGATGAATTTATATACTTTTAGATGTACACACAACTTTTCGAAAAC--------AT--CAT---------------------CCCTTATTCCATGTATATCGAAATCTTTCT-GAGTTTT---------TT-------------------------------------------------------------TTAAGATGAAA-----------AAAAAA--------CACTCAC-----------------------------
droKik1 scf7180000302401:515950-516157 + ---GGAACGCATT-----TAGAG-CTAGGCTAATAAT--A-TTCGTGTTTAACTTGTGATAAAGAGTTACAGCTGAATTTATGTATTATTAAATGTGCACAACCG------------------------GCGCCTTTTCGAGACAACATTTTCCCGTTTTCCACACACAC---G---------TACTATC---------TA---------------------TATTGTAAAGTTCAAGCCCAAGTTGGATTATTCCCCTGGAACTGGGTGCCT-----------TCAAAT--------AGACAAG-----------------------------
droAna3 scaffold_12916:2009916-2010013 - AC-G-GGCGCATT------AGAG-ATAGGCTAACATATATATTTTCGTTTAATTTGTGATAAAGTGTTGCAGCAGAATTTACGTACTATTAGACGTGCACAGGCCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396728:664013-664113 - GA-CGGGCGCATT------AGAG-ATAGGCTAACATATATATTTTCGATTAATTTGTGATAAAGAGTTGCAGCAGAATTTACGTACTATTAGACGTGCACAGGTCATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group2:120608-120839 + CC-AGAAAGCATGACAAGTAGTGGTTAGGCTAATGTA----TTTTCATTTAACTTGTGATAAATATTTACATCTGAATTTATGTATTATTATATGTGCAAAAGTCTCTTCAAAATCATATCCTTATCTAGCTCCTT-----------------------TTCACGAATATCGCAATATATTTTT-A----TCTTTC---TATTAAGAGTGTTTTTGTCAAACTAT------TGTCAAG-TTA--TTTGATTAT--CCCTGGAATTGGGTGCAT-----------TCAAAT--------------------------------------------
droPer2 scaffold_8:3773944-3774175 - CC-AGAAAGCATGACAAGTAGTGGTTAGGCTAATGTA----TTTTCATTTAACTTGTGATAAATATTTACATCTGAATTTATGTATTATTATATGTGCAAAAGTCTCTTCAAAATCATATCCTTATCTAGCTCCTT-----------------------TTCACGAATATCGCAATATATTTTT-A----TCTTTC---TATTAAGAGTGTTTTTGTCAAACTAT------TGTCAAG-TTA--TTTGATTAT--CCCTGGAATTGGGTGCAT-----------TCAAAT--------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CA-AGAGCGCATT-----TAGGTATTAGGCTAATTTA--ATTTTTTGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------TACTTTT---------AA---------------TTAAAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------TAACCAG-----------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................TAAAGAGATACAGCTGAATTTATG...........................................................................................................................................................................................................................................................241525.005250024321000004274100000
...........................................................TAAAGAGATACAGCTGAATTTATGTA.........................................................................................................................................................................................................................................................261103.0010300213300000048100000
...........................................................TAAAGAGATACAGCTGAATTTATGTAT........................................................................................................................................................................................................................................................271101.001010012500000074100000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTAAAA................................................................................................................25199.0099000200000097000000
...........................................................TAAAGAGATACAGCTGAATTTATGT..........................................................................................................................................................................................................................................................25177.00770021100000063100000
.......................................................................................................................................................................................................................................TGTCAAAGCCAAATTGG--T-----ATTGGGT.......................................................................25165.0065000000000065000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGGTTTGGG..................................................................26143.0043000000000043000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTAAAATA..............................................................................................................27138.0038000000000038000000
................................................................................................................................................................................................................................T------TGTCAAAGCCAAATTGG--T-----ATTGGGT.......................................................................26128.0028000000000028000000
.......................................................................................................................................................................................................................................TGTCAAAGCCAAATTGG--T-----ATTGGGTT......................................................................26123.0023000000000023000000
......................................................................................TATTAGATTGGCACAAGCCTT---------------------------------------------CCCTT.................................................................................................................................................................................26120.0020000410000015000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCCTTT................................................................................................................................................................................25119.0019000300000016000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----ATTGGG........................................................................27119.0019000300000016000000
...........................................................TAAAGAGATACAGCTGA..................................................................................................................................................................................................................................................................17116.0016000000000016000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----ATTGGGT.......................................................................28115.0015001000000014000000
......................................................................................TATTAGATTGGCACAAGCCTT---------------------------------------------CCCT..................................................................................................................................................................................25114.0014000210000011000000
......................................................................................TATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTT................................................................................................................................................................................27113.0013000100000012000000
.............................................................................................................................................................................................................................................AGCCAAATTGG--T-----ATTGGGTTTGGG..................................................................24113.0013000100000012000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------......................................................................................................................................................................................19113.0013000000000013000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTAAAATAT------.......................................................................................................28112.0012000000000012000000
...........................................................TAAAGAGATACAGCTGAATT...............................................................................................................................................................................................................................................................20112.0012000000000012000000
...................................................................................TATTATTAGATTGGCACAAGCCTT---------------------------------------------......................................................................................................................................................................................24111.001100000000009200000
...........................................................TAAAGAGATACAGCTGAATTTAT............................................................................................................................................................................................................................................................23111.001100020000009000000
...........................................................TAAAGAGATACAGCTGAATTTATGTATT.......................................................................................................................................................................................................................................................28111.001100110000009000000
......................................................................................TATTAGATTGGCACAAGCCTT---------------------------------------------......................................................................................................................................................................................21111.0011000000000011000000
...........................................................TAAAGAGATACAGCT....................................................................................................................................................................................................................................................................15210.5021000000000021000000
................................................................................................................................................................................................................................T------TGTCAAAGCCAAATTGG--T-----ATTGGGTT......................................................................27110.0010000000000010000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----ATTGG.........................................................................26110.0010000000000010000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTC...............................................................................................................................................................................26110.001000070000002100000
........................................................................................TTAGATTGGCACAAGCCT....................................................................................................................................................................................................................................1819.00900000000009000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTAAAAT...............................................................................................................2619.00900000000009000000
.....................................................................................................................................................................TAAACTGCG---------TACTTTT---------AA---------------TTAAAA................................................................................................................2418.00800030000005000000
CA-AGAGCGCATT-----TAGGTATTAGGC................................................................................................................................................................................................................................................................................................................2417.00700000000007000000
...........................................................TAAAGAGATACAGCTGAAT................................................................................................................................................................................................................................................................1917.00700001100005000000
......................................................................................TATTAGATTGGCACAAGCCTT---------------------------------------------CCC...................................................................................................................................................................................2417.00700040000003000000
............................................................................................................................................................................................................................................AAGCCAAATTGG--T-----ATTGGGTTTGGG..................................................................2516.00600000000006000000
...............................................................................................................................................................................................................................................CCAAATTGG--T-----ATTGGG........................................................................1616.00600000000006000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------A......................................................................................................................................1816.00600000000006000000
...........................................................TAAAGAGATACAGCTGAA.................................................................................................................................................................................................................................................................1816.00600000000006000000
.....................................................................................TTATTAGATTGGCACAAGCCTT---------------------------------------------CCCTT.................................................................................................................................................................................2716.00600040000002000000
.A-AGAGCGCATT-----TAGGTA......................................................................................................................................................................................................................................................................................................................1716.00600000000006000000
..............................................................................................................................................................................................................................................GCCAAATTGG--T-----ATTGGGT.......................................................................1816.00600000000006000000
.............................................................................................................................................................................................................................................AGCCAAATTGG--T-----ATTGGGTTTGGGT.................................................................2515.00500000000005000000
..............................................................................................................................................................................................................................................GCCAAATTGG--T-----ATTGGG........................................................................1715.00500000000005000000
................................................................................................................................................................................................................................T------TGTCAAAGCCAAATTGG--T-----ATTGGG........................................................................2515.00500000000005000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGGT.......................................................................2115.00500000000005000000
....................................................................ACAGCTGAATTTATGTA.........................................................................................................................................................................................................................................................1715.00500000000005000000
.......................................................................................................................................................................................................................................TGTCAAAGCCAAATTGG--T-----ATTGGG........................................................................2415.00500000000005000000
.................................................................................................................................................................................................................................................................TTGGGTTTGGGTGCAT-----------TAAGAT--------TAACC...............................2715.00500000000005000000
...........................................................TAAAGAGATACAGCTGAATTTA.............................................................................................................................................................................................................................................................2215.00500301000001000000
..................TAGGTATTAGGCTAATT...........................................................................................................................................................................................................................................................................................................1715.00500000000005000000
...........................................................TAAAGAGATACAGCTG...................................................................................................................................................................................................................................................................1624.50900000000009000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------C.....................................................................................................................................................................................2014.00400000000004000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------T.....................................................................................................................2014.00400000000004000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCCT..................................................................................................................................................................................2314.00400000000004000000
.............................................TGTTT-ACATGTGATAAAGAGATACAGC.....................................................................................................................................................................................................................................................................2714.00400020000001100000
...................................................................................TATTATTAGATTGGCACAAGCCTT---------------------------------------------C.....................................................................................................................................................................................2514.00400010000003000000
.........................................................................................TAGATTGGCACAAGCCTT---------------------------------------------CCCTTTC...............................................................................................................................................................................2514.00400040000000000000
.............................................................................................TTGGCACAAGCCTT---------------------------------------------CCCTTTCACCACT.........................................................................................................................................................................2714.00400040000000000000
......................................................TGTGATAAAGAGATACAGCTGAATT...............................................................................................................................................................................................................................................................2514.00400000000004000000
....................................................................ACAGCTGAATTTATGTAT........................................................................................................................................................................................................................................................1814.00400000000004000000
.............................................................................................................................................................................................................................................AGCCAAATTGG--T-----ATTGGGT.......................................................................1914.00400000000004000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGG........................................................................2013.00300000000003000000
.........................................................................................................................................................................................................................TAAAATAT------TGTCAAAGCCAAATTGG--T-----A.............................................................................2713.00300020000001000000
.................................................................GATACAGCTGAATTTATGT..........................................................................................................................................................................................................................................................1913.00300000000003000000
....................................................................................................................................................................TTAAACTGCG---------TACTT..................................................................................................................................................1523.00600000000006000000
........................................................................................................................................................................................................................TTAAAATAT------TGTCAAAGCCAAATTGG--....................................................................................2613.00300010000002000000
........................................................TGATAAAGAGATACAGCTGAATTTA.............................................................................................................................................................................................................................................................2513.00300000000003000000
.........................................................................................TAGATTGGCACAAGC......................................................................................................................................................................................................................................1513.00300000000003000000
.......................................................................................ATTAGATTGGCACAAGCCTT---------------------------------------------CCCT..................................................................................................................................................................................2413.00300010000002000000
............................................................................................................................................................................................................................................AAGCCAAATTGG--T-----ATTGGGT.......................................................................2013.00300000000003000000
......................................................................................TATTAGATTGGCACAAGC......................................................................................................................................................................................................................................1813.00300000000003000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCC...................................................................................................................................................................................2213.00300010000002000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCCTT.................................................................................................................................................................................2413.00300020000001000000
............................................................................................................................................................................................................................................AAGCCAAATTGG--T-----ATTGGGTT......................................................................2113.00300000000003000000
............................................................AAAGAGATACAGCTGAATTTATG...........................................................................................................................................................................................................................................................2313.00300030000000000000
.................................................................................................................................................................................................................................................AAATTGG--T-----ATTGGGTT......................................................................1613.00300000000003000000
.................................................................................................................................................................................................................................................AAATTGG--T-----ATTGGGT.......................................................................1513.00300000000003000000
.................................................................................TGTATTATTAGATTGGCACAAGCCTT---------------------------------------------......................................................................................................................................................................................2613.00300000000002100000
....................................................................................................................................................................................................................................................TTGG--T-----ATTGGGTTTGGGTGCA..............................................................2113.00300000000003000000
.....................................................................................TTATTAGATTGGCACAAGCCTT---------------------------------------------CCC...................................................................................................................................................................................2513.00300020000001000000
.......................................................................................ATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTT................................................................................................................................................................................2613.00300000000003000000
..........................................................................................................................................................................................................................................................T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------....................................2413.00300000000003000000
.....................................................................................TTATTAGATTGGCACAAGCCTT---------------------------------------------CCCT..................................................................................................................................................................................2613.00300020000001000000
............................................TTGTTT-ACATGTGATAAAGAGATACAGC.....................................................................................................................................................................................................................................................................2813.00300100000002000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------.......................................................................................................................................1713.00300000000003000000
........................................................................................TTAGATTGGCACAAGC......................................................................................................................................................................................................................................1613.00300000000003000000
.........................................................................................TAGATTGGCACAAGCCT....................................................................................................................................................................................................................................1713.00300000000003000000
.........................................................................................................................................................................................................................TAAAATAT------TGTCAAAGCCAAATTGG--....................................................................................2513.00300000000003000000
....................................................................................................................................................................................................................................................TTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAGA.............................................2713.00300100000002000000
.......................................................................................ATTAGATTGGCACAAGCCT....................................................................................................................................................................................................................................1913.00300000000003000000
....................................................................ACAGCTGAATTTATGT..........................................................................................................................................................................................................................................................1632.33700000000007000000
.............................................................................................................................................................TCACCACTTAAACTGCG---------TACTTTT---------AA---------------......................................................................................................................2612.00200000000002000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--....................................................................................2012.00200000000002000000
.......................................................................................................................................................................................................................................................................TTGGGTGCAT-----------TAAGAT--------TAACCAG-----------------------------2312.00200000000002000000
.................................................................................................................................................................................................................................................................TTGGGTTTGGGTGCAT-----------TAAGAT--------TAAC................................2612.00200000000002000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----ATT...........................................................................2412.00200100000001000000
..................................................................ATACAGCTGAATTTATGT..........................................................................................................................................................................................................................................................1812.00200000000002000000
CA-AGAGCGCATT-----TAGGTATTAGGCTAA.............................................................................................................................................................................................................................................................................................................2712.00200000000002000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTAAA.................................................................................................................2412.00200000000002000000
......................................................TGTGATAAAGAGATACAGCTGAATTT..............................................................................................................................................................................................................................................................2612.00200000000011000000
................................................................................................................................................................................................................................................CAAATTGG--T-----ATTGGGT.......................................................................1612.00200000000002000000
.................................................T-ACATGTGATAAAGAGATACAGCTGAA.................................................................................................................................................................................................................................................................2712.00200000000002000000
.........................................................GATAAAGAGATACAGCTGAATT...............................................................................................................................................................................................................................................................2212.00200000000002000000
...............................................................................................................................................................................................................................AT------TGTCAAAGCCAAATTGG--T-----ATTGGGT.......................................................................2712.00200010000001000000
.........................................................................................................................................................................................CTTTT---------AA---------------TTAAAATAT------TGTC...................................................................................................2012.00200000000002000000
.A-AGAGCGCATT-----TAGGTATTAGGC................................................................................................................................................................................................................................................................................................................2312.00200000000002000000
...........................................................................................................................................................................GCG---------TACTTTT---------AA---------------TTAAAATAT------TGTC...................................................................................................2512.00200011000000000000
...........................................................TAAAGAGATACAGCTGAATTT..............................................................................................................................................................................................................................................................2112.00200000000001100000
.A-AGAGCGCATT-----TAGG........................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
......................................................TGTGATAAAGAGATACAGCTGAAT................................................................................................................................................................................................................................................................2412.00200000000002000000
..........................................................................................................................................................................................................................................CAAAGCCAAATTGG--T-----ATTGGGTTTG....................................................................2512.00200000000002000000
......................................................................................TATTAGATTGGCACAAG.......................................................................................................................................................................................................................................1712.00200000000002000000
...........................................................................................................................................................................GCG---------TACTTTT---------AA---------------TTAAAA................................................................................................................1812.00200000000002000000
...........................................................TAAAGAGATACAGCTGAATTTATGC..........................................................................................................................................................................................................................................................2512.00200200000000000000
.A-AGAGCGCATT-----TAGGT.......................................................................................................................................................................................................................................................................................................................1612.00200000000002000000
.........................................................................................................................................................................................................................................TCAAAGCCAAATTGG--T-----ATTGGGTTTGGG..................................................................2812.00200000000002000000
....................................................................................................................................................................................................................................................TTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAG..............................................2612.00200010000001000000
............................................................AAAGAGATACAGCTGAATTTATGT..........................................................................................................................................................................................................................................................2412.00200010000001000000
.............................................................................................................................................................................................................................................AGCCAAATTGG--T-----ATTGGGTTTGGGTG................................................................2612.00200000000002000000
................................................................................................................................................................................................................................T------TGTCAAAGCCAAATTGG--T-----ATTGG.........................................................................2412.00200000000002000000
.........................TAGGCTAATTTA--ATTTTTTGTTT-ACATG......................................................................................................................................................................................................................................................................................2812.00200020000000000000
.........................................................................................................TT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------TAC....................................................................................................................................................2712.00200010000001000000
......................................................................................TATTAGATTGGCACAAGCCTT---------------------------------------------CC....................................................................................................................................................................................2312.00200010000001000000
.........................................................................................................TT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------TACT...................................................................................................................................................2812.00200000000002000000
...........................................................TAAAGAGATACAGCTGAATTTATT...........................................................................................................................................................................................................................................................2412.00200010000001000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAA..........................................................................................1612.00200000000002000000
.....................................................................................................................................................................TAAACTGCG---------TACTTTT---------AA---------------TTAAAATA..............................................................................................................2612.00200000000002000000
..............................................................................................................................................................CACCACTTAAACTGCG---------TACTTTT---------AA---------------T.....................................................................................................................2612.00200000000002000000
.....................................................................................TTATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTT................................................................................................................................................................................2812.00200000000002000000
...AGAGCGCATT-----TAGGTATTAGGCTAA.............................................................................................................................................................................................................................................................................................................2512.00200100000001000000
........................................................................................................................................................................................................................................GTCAAAGCCAAATTGG--T-----ATTGGGT.......................................................................2412.00200000000002000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGGTTTG....................................................................2412.00200000000002000000
...........................................................TAAAGAGATACAGCTGAATTTATA...........................................................................................................................................................................................................................................................2412.00200000000002000000
......................................................................................TATTAGATTGGCACAAGCCT....................................................................................................................................................................................................................................2012.00200000000002000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGGTT......................................................................2212.00200000000002000000
................................................................................................................................................................................................................................................................ATTGGGTTTGGGTGCA..............................................................1612.00200000000002000000
......................................................................................TATTAGATTGGCACAAGCC.....................................................................................................................................................................................................................................1912.00200000000002000000
..........................................................................................................................................................................TGCG---------TACTTTT---------AA---------------TTAAAA................................................................................................................1912.00200000000002000000
.......................................................................GCTGAATTTATGTAT........................................................................................................................................................................................................................................................1521.50300000000003000000
....................................................................................................................................................................TTAAACTGCG---------TACTTT.................................................................................................................................................1621.50300000000003000000
..........................................................................................................................................................................................................................................CAAAGCCAAATTGG--T-----ATTGGGTT......................................................................2311.00100000000001000000
...................................................................................TATTATTAGATTGGCACAAGCCTT---------------------------------------------CCC...................................................................................................................................................................................2711.00100010000000000000
................................................TT-ACATGTGATAAAGAGATACAGC.....................................................................................................................................................................................................................................................................2411.00100000000001000000
......................................................TGTGATAAAGAGATACAG......................................................................................................................................................................................................................................................................1811.00100001000000000000
...................................................................................................................................................................................................................................................ATTGG--T-----ATTGGGTTTGGGTGC...............................................................2111.00100010000000000000
..................................................................................................................................................................................................................................................AATTGG--T-----ATTGGGTTTGGGT.................................................................2011.00100000000001000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----..............................................................................2111.00100000000001000000
.........................................................GATAAAGAGATACAGCTGAAT................................................................................................................................................................................................................................................................2111.00100000000001000000
...........................................................................................GATTGGCACAAGCCTT---------------------------------------------CCCTTTCA..............................................................................................................................................................................2411.00100010000000000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTCAC.............................................................................................................................................................................2811.00100010000000000000
.....................................................ATGTGATAAAGAGATACAGCTG...................................................................................................................................................................................................................................................................2211.00100000000001000000
.......................................................................................ATTAGATTGGCACAAGCCTT---------------------------------------------CCC...................................................................................................................................................................................2311.00100000000001000000
.................................................T-ACATGTGATAAAGAGATACAGCTGAAT................................................................................................................................................................................................................................................................2811.00100000000001000000
................................................................................................................................................................................................................................T------TGTCAAAGCCAAATTGG--....................................................................................1811.00100000000001000000
......................................................................................................................................................................................................................................................................TTTGGGTGCAT-----------TAAGA.............................................1611.00100000000001000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----A.............................................................................2211.00100000000001000000
......................................................TGTGATAAAGAGATACAGCTGAATTTA.............................................................................................................................................................................................................................................................2711.00100000000001000000
...................................................ACATGTGATAAAGAGATACAGC.....................................................................................................................................................................................................................................................................2211.00100000000001000000
.......................................................................................................................................................................................................................................TGTCAAAGCCAAATTGG--T-----ATTG..........................................................................2211.00100000000001000000
............................................................AAAGAGATACAGCTGAATTTAT............................................................................................................................................................................................................................................................2211.00100001000000000000
............................................................................................................................................................................................................................................................................TGCAT-----------TAAGAT--------TAACC...............................1611.00100000000001000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTAA..................................................................................................................2311.00100000000001000000
...................................................................................TATTATTAGATTGGCACAAGCCC....................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................................................................................................TTT---------AA---------------TTAAAATAT------TGT....................................................................................................1711.00100000000001000000
...........................................................TAAAGAGATACAGCTGAATTTATGA..........................................................................................................................................................................................................................................................2511.00100000000001000000
...........................................................................................................................................................................GCG---------TACTTTT---------AA---------------TTAAAATAA------.......................................................................................................2111.00100000000001000000
.....................................................ATGTGATAAAGAGATACAGCTGAA.................................................................................................................................................................................................................................................................2411.00100000000001000000
...AGAGCGCATT-----TAGGTATT....................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...........................................................TAAAGAGATACAGCTGAATTTATGG..........................................................................................................................................................................................................................................................2511.00100100000000000000
.A-AGAGCGCATT-----TAGGTAT.....................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.................................................................................TGTATTATTAGATTGGCACAAGCCTT---------------------------------------------C.....................................................................................................................................................................................2711.00100000000001000000
...................................................................TACAGCTGAATTTATGTA.........................................................................................................................................................................................................................................................1811.00100000000001000000
CA-AGAGCGCATT-----TAGGTATTAGG.................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
...AGAGCGCATT-----TAGGTATTAGG.................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.....................................................................CAGCTGAATTTATGTAT........................................................................................................................................................................................................................................................1721.00200000000002000000
..........................................................................................AGATTGGCACAAGCCTT---------------------------------------------CCCTTTC...............................................................................................................................................................................2411.00100010000000000000
.....................................................................................................................................................................TAAACTGCG---------TACTTTT---------AA---------------TTAAA.................................................................................................................2311.00100010000000000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CC....................................................................................................................................................................................2111.00100000000001000000
...............................................................................TATGTATTATTAGATTGGCACAAG.......................................................................................................................................................................................................................................2411.00100000000001000000
............................................................AAAGAGATACAGCTGAATTTATGTA.........................................................................................................................................................................................................................................................2511.00100010000000000000
.........................................................................................TAGATTGGCACAAGCCTT---------------------------------------------CCCTTT................................................................................................................................................................................2411.00100000000001000000
............................................................AAAGAGATACAGCTGAATTTATGTAT........................................................................................................................................................................................................................................................2611.00100010000000000000
......................................................................................................................................................................AAACTGCG---------TACTTTT---------AA---------------TTAAAAT...............................................................................................................2411.00100000000001000000
..........................................................................................................................................................................TGCG---------TACTTTT---------AA---------------TTAAAATAT------TGTCAA.................................................................................................2811.00100000000001000000
.......................................................................................................................................................................................................................................................................TTGGGTGCAT-----------TAAGA.............................................1511.00100000000001000000
..........................................................................................................................................................................................................................................................T-----ATTGGGTTTGGGTGCA..............................................................1711.00100000000001000000
..........................................................................................................................................................................TGCG---------TACTTTT---------AA---------------TTAAAAT...............................................................................................................2011.00100000000001000000
.............................................................................................................................................................TCACCACTTAAACTGCG---------TACTTTT---------.......................................................................................................................................2411.00100010000000000000
..............................................................AGAGATACAGCTGAATTTATGTA.........................................................................................................................................................................................................................................................2311.00100100000000000000
..............................................................................................................................................................................................................................................GCCAAATTGG--T-----ATTGGGTTTGGG..................................................................2311.00100000000001000000
..........................................................................................................................................................................................................................................................T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------T...................................2511.00100000000001000000
....................................................................................................AAGCCTT---------------------------------------------CCCTTTCACCACT.........................................................................................................................................................................2011.00100000000001000000
.........................................................................................................................................................................................................................................TCAAAGCCAAATTGG--T-----ATTGGGTT......................................................................2411.00100000000001000000
..................................................................................................................................................................................................................................................AATTGG--T-----ATTGGGTTTGGGTG................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................TGGGTTTGGGTGCAT-----------TAAGA.............................................2011.00100000000001000000
........................................................TGATAAAGAGATACAGCTGAA.................................................................................................................................................................................................................................................................2111.00100000000001000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGGTTTGTC..................................................................2611.00100000000001000000
...AGAGCGCATT-----TAGGTATTAGGC................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................................................................................................................................TAAACTGCG---------TACTTTT---------AA---------------T.....................................................................................................................1911.00100000000001000000
....................................................................................................................................................................TTAAACTGCG---------TACTTTT---------AA---------------TTA...................................................................................................................2211.00100000000001000000
.........................................................GATAAAGAGATACAGCTGAATTTA.............................................................................................................................................................................................................................................................2411.00100000000001000000
....................................................................ACAGCTGAATTTATGTATT.......................................................................................................................................................................................................................................................1911.00100000000001000000
........................................................................................TTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTA...............................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................TGG--T-----ATTGGGTTTGGGTGCAA-----------..................................................2111.00100000000001000000
..............................................................................................................................................................CACCACTTAAACTGCG---------.......................................................................................................................................................1611.00100000000001000000
...........................................................................................................................................................................................................................................AAAGCCAAATTGG--T-----ATTGGGTTTGG...................................................................2511.00100000000001000000
...........................................................TAAAGAGATACAGCTGAATTTATGTATA.......................................................................................................................................................................................................................................................2811.00100000000001000000
............................................................................................ATTGGCACAAGCCTT---------------------------------------------......................................................................................................................................................................................1511.00100000000001000000
.........................TAGGCTAATTTA--ATTTTTTGT..............................................................................................................................................................................................................................................................................................2111.00100000000001000000
...................................................................TACAGCTGAATTTATGTATTATT....................................................................................................................................................................................................................................................2311.00100000000001000000
.........................................................................................TAGATTGGCACAAGCCTT---------------------------------------------CCCT..................................................................................................................................................................................2211.00100000000001000000
...........TT-----TAGGTATTAGGCTA..............................................................................................................................................................................................................................................................................................................1621.00200000000002000000
...............................................................................................................................................................................................................................AT------TGTCAAAGCCAAATTGG--T-----ATTGGG........................................................................2611.00100000000001000000
...........................................................................................................................................................................GCG---------TACTTTT---------AA---------------TTAAAATAT------T......................................................................................................2211.00100001000000000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----ATTGGAC.......................................................................2811.00100000000001000000
...........................................................TAAAGAGATACAGCTGAATA...............................................................................................................................................................................................................................................................2011.00100000000001000000
......................................................TGTGATAAAGAGATACA.......................................................................................................................................................................................................................................................................1711.00100000000001000000
........................................................................................TTAGATTGGCACAAG.......................................................................................................................................................................................................................................1511.00100000000001000000
..........................................................................................................................................................................................................................................CAAAGCCAAATTGG--T-----ATTGGGTTTGGG..................................................................2711.00100000000001000000
.........................................................................................................................................................................................CTTTT---------AA---------------TTAAAATAT------TGTCAAAGCC.............................................................................................2611.00100100000000000000
............................................................AAAGAGATACAGCTGA..................................................................................................................................................................................................................................................................1611.00100000000001000000
...............................................................................................................................................................ACCACTTAAACTGCG---------TA.....................................................................................................................................................1711.00100000000001000000
.................................................T-ACATGTGATAAAGAGATACA.......................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................TGTTT-ACATGTGATAAAGAGATACAG......................................................................................................................................................................................................................................................................2611.00100000000001000000
.........................TAGGCTAATTTA--ATTTTTTGTTT-AC.........................................................................................................................................................................................................................................................................................2511.00100000000001000000
.................................................................................................................................................................................................................................................................TTGGGTTTGGGTGCAT-----------T.................................................1711.00100000000001000000
........................................................................................................................................................................................................................................GTCAAAGCCAAATTGG--T-----ATTGGG........................................................................2311.00100000000001000000
............................................................................................................................................................TTCACCACTTAAACTGCG---------TACT...................................................................................................................................................2211.00100000000001000000
.............................................................................................................................................................................................................................................AGCCAAATTGG--T-----ATTGGGTTTTAA..................................................................2411.00100000000001000000
...........................................................TAAAGAGATACAGCTGAATTTAG............................................................................................................................................................................................................................................................2311.00100000000001000000
.........................................................................................................................................................................CTGCG---------TACTTTT---------AA---------------TTAAA.................................................................................................................1911.00100000000001000000
....................................................................................................................................................................................................................................................TTGG--T-----ATTGGGTTTGGGTGCAT-----------TA................................................2411.00100000000001000000
.........................................................................................................TT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------.......................................................................................................................................................2411.00100000000001000000
CA-AGAGCGCATT-----TAGGTATTAG..................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
..................................................................ATACAGCTGAATTTATGTAT........................................................................................................................................................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................................................................AAATTGG--T-----ATTGGGTTTG....................................................................1811.00100000000001000000
..............................................GTTT-ACATGTGATAAAGAGATACAGC.....................................................................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................ACCACTTAAACTGCG---------TACTTTT---------AA---------------T.....................................................................................................................2511.00100000000001000000
............................................................................................................................................................TTCACCACTTAAACTGCG---------TACTTTT---------A......................................................................................................................................2611.00100000000001000000
..................TAGGTATTAGGCTAATTTA--.......................................................................................................................................................................................................................................................................................................1911.00100000000001000000
............................................................................................................................................................................................................................................................................TGCAT-----------TAAGAT--------TAACCAG-----------------------------1811.00100000000001000000
.................................................................GATACAGCTGAATTTAT............................................................................................................................................................................................................................................................1711.00100000000001000000
.................................................................................................................................................................................................................................................AAATTGG--T-----ATTGGGTTTGGG..................................................................2011.00100000000001000000
................................................................................................GCACAAGCCTT---------------------------------------------CCCTTT................................................................................................................................................................................1711.00100000000001000000
..........................................................................................................................................................................................................................................................T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------TAACC...............................2911.00100010000000000000
........................TTAGGCTAATTTA--ATTTTTTGT..............................................................................................................................................................................................................................................................................................2211.00100000000001000000
.............................................................AAGAGATACAGCTGAAT................................................................................................................................................................................................................................................................1711.00100000000001000000
....................................................................................ATTATTAGATTGGCACAAGCCTT---------------------------------------------CCC...................................................................................................................................................................................2611.00100000000001000000
droSec2
CA-AGAGCGCATT-----TAGGTATTAGGCTAATTTA--ATTTTTTGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTT---------------------------------------------CCCTTTCACCACTTAAACTGCG---------TACTTTT---------AA---------------TTAAAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAAAT--------TAACCAG-----------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................CAAATTGG--T-----ATTGGGTTTGGGTC................................................................2311.0010100
dm3
CA-AGAACGCATT-----TAGGTATTAGGCTAATATA--ATTTTTTGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCTCAAGCCT----------------------------------------------CCTTTTTCCCACTTAAACTGCG---------TATTTTT---------AA---------------TGAAAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------TAACCAG-----------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................TGG--T-----ATTGGGTTTGGGTGT...............................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TAT------TGTCAAAGCCAAATTGG--T-----ATTGGG........................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGCATT-----TAGGTATTAGGCTAA.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................TTCCCACTTAAACTGCG---------TATTTTT---------.......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TTAAACTGCG---------TATTTTT---------AA---------------TG....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TTTGTTT-ACATGTGATAAAGAGAT..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................TTTTGTTT-ACATGTGATAAAGAGATACA.......................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................AAATAT------TGTCAAAGCCAAA..........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TGTATTATTAGATTGGCTCAAGCCT----------------------------------------------CCTTT.................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TGAAAATAT------TGTCAAAGCCAAATTGG--....................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CAGCTGAATTTATGTATTATTAGA.................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCCCACTTAAACTGCG---------TATTTTT---------.......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGATAAAGAGATACAGCT....................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GG--T-----ATTGGGTTTGGGTGCA..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ACATGTGATAAAGAGATACAGCTGA..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................TAAAGAGATACAGCTGAATTTATGTAT........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................TAAACTGCG---------TATTTTT---------AA---------------TGA...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CTTTTTCCCACTTAAACTGCG---------.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TTGGGTTTGGGTGCAT-----------TAAGAT--------TAACC...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................ATGTATTATTAGATTGGCTCAAGCCT----------------------------------------------T.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGTGATAAAGAGATACAGCTGAATT...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................T-----ATTGGGTTTGGGTGCAT-----------TAAGAT--------TAAC................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................GG--T-----ATTGGGTTTGGGTGC...............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................CCCACTTAAACTGCG---------TATTTT.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CA-ATAACGCATT-----TAAGTATTAGGCTAATATA--ACGTTTCGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACAAGCCTT---------------------------------------------CCTTTTTCCCATTTAAACTGCG---------TAGTTTT---------AA---------------TTACAATAC------TGTCAACGTTAAATTGG--T-----ATTGGGTTTGGGTGCGT-----------TAAGAT--------AAACAAT-----------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................ATTATTAGATTGGCACAAGC......................................................................................................................................................................................................................................2011.0010000010
droYak3
CA-AGAGCGCATT-----TAGATATTAGGCTAATATA--ACGTTTCGTTT-ACATGTGATAAAGAGATACAGCTGAATTTATGTATTATTAGATTGGCACGAGCCTT---------------------------------------------CCTTTTTTCCATTTAAACTGCC---------TAGTTTT---------AA---------------TTACAATAT------TGTCAAAGCCAAATTGG--T-----ATTGGGTCTAGGTGCAT-----------TAGGAT--------AAAC--G-----------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................GGTGCAT-----------TAGGAT--------AAAC--..............................1713.00300000000003
droEug1
CC-AGGCCGCATT-----TAGATATAAGGCTAATATA--TTTTTTCGTTTAACGTGTGATAAAGAGTTATAGCTGAATTTATGTATTATTAGATATGCGCAAGCCTTTG--GTCAA--------GT--CTTTCCTT--------------TTCCGTTTTTCCTTTTAAATGCCG---------AAGTTTTTGCTACAAAAG---------------TTAAAGTTA------CGTCGAACCCAAGATTA--T-----ATTGGAATTAGGTGCAT-----------CGGAAT--------AGAAAAG-----------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GG-AAACCGCATT-----TAAAAATTAAGCTTGTACA--CTGTTTCGTTAAACGTGTGATAAAGAGTTACAGCTGAGTTTACGTATTATTATATGTGCACAAGTGTATA--TTCAC--------CGCTA-----------------------CCCTTTTTCCATTAAACTTGCG---------TCGCTTTTCTTTC---AA---------------TTAAAAAGT------TGTCGAACGCAAGTTGG--T-----ATTGGAATTGGGTGCAT-----------TGAAGT--------AGATAAGTTCTGATAACT-AT---------------SizeHit CountTotal NormTotal
No Reads
droTak1
CACGGAACGCATT-----TAAAAATTAGGCTAGTATA--CTTTTTCGTTTAACTTGTGATAAAGAGTTACAGCTGAATTTATGTATTAATAGATGTGCAGAAGCCTTTA--ATCAC--------GT--GTT---------------------CCCTTTTTT------------------------ATTTT---------AATTA------------ATAAAGTGT------TTTTGAACGCAAGTC-------------GGAATTGGGTGCAT-----------TGAAA---------AGATAAGTTCTTATAACTTATTTTCGCACTCATTTGSizeHit CountTotal NormTotal
No Reads
droEle1
GA-GGAACGCATT-----TAGTGATTAAGCTAATATA--TTTTTTCGTT-AACTTGTGATACAGAGTTACAATTGAATTTATCTAATATTAAACTTCCACAAGCCTTTTTAAAAAT--------GT--CCC---------------------CC-CTTTTCCTCAAGACTCGAAATTAATAT-GAGTTTT---------AT---------------TTAATGTGT------CGTCAGAGACC-TTTAA--T-----TTTCGTTTTTAATGCTCATAAATACATTTAAGATTTTTAAAAAAGGGAA-----------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GC-GGAACGCATT-----TAGAGATTAGGCTAATATA--TTTTTTCGTTTAAGTTGTGATAAAGAGTTACAACTAAATTTATATATTATCAGATTTGCACAAGCCTTTTTGAAAAC--------AT--ACT---------------------CCCATTTTCCAATAAAATCGAA-------------------------AA---------------GAAAAGTTT------CGTCCAATCCAAAACGT--T-----GTTGGAATTGGGTGCTT-----------TGAAAC--------AAATAAG-----------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CACGGAAAGCATT-----TAGAGATTAGCCTAATGTA--CTTTTTTGTTTCACTTGTGATAAAGAGTTACAGATGAATTTATATACTTTTAGATGTACACACAACTTTTCGAAAAC--------AT--CAT---------------------CCCTTATTCCATGTATATCGAAATCTTTCT-GAGTTTT---------TT-------------------------------------------------------------TTAAGATGAAA-----------AAAAAA--------CACTCAC-----------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
---GGAACGCATT-----TAGAG-CTAGGCTAATAAT--A-TTCGTGTTTAACTTGTGATAAAGAGTTACAGCTGAATTTATGTATTATTAAATGTGCACAACCG------------------------GCGCCTTTTCGAGACAACATTTTCCCGTTTTCCACACACAC---G---------TACTATC---------TA---------------------TATTGTAAAGTTCAAGCCCAAGTTGGATTATTCCCCTGGAACTGGGTGCCT-----------TCAAAT--------AGACAAG-----------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AC-G-GGCGCATT------AGAG-ATAGGCTAACATATATATTTTCGTTTAATTTGTGATAAAGTGTTGCAGCAGAATTTACGTACTATTAGACGTGCACAGGCCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GA-CGGGCGCATT------AGAG-ATAGGCTAACATATATATTTTCGATTAATTTGTGATAAAGAGTTGCAGCAGAATTTACGTACTATTAGACGTGCACAGGTCATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CC-AGAAAGCATGACAAGTAGTGGTTAGGCTAATGTA----TTTTCATTTAACTTGTGATAAATATTTACATCTGAATTTATGTATTATTATATGTGCAAAAGTCTCTTCAAAATCATATCCTTATCTAGCTCCTT-----------------------TTCACGAATATCGCAATATATTTTT-A----TCTTTC---TATTAAGAGTGTTTTTGTCAAACTAT------TGTCAAG-TTA--TTTGATTAT--CCCTGGAATTGGGTGCAT-----------TCAAAT--------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CC-AGAAAGCATGACAAGTAGTGGTTAGGCTAATGTA----TTTTCATTTAACTTGTGATAAATATTTACATCTGAATTTATGTATTATTATATGTGCAAAAGTCTCTTCAAAATCATATCCTTATCTAGCTCCTT-----------------------TTCACGAATATCGCAATATATTTTT-A----TCTTTC---TATTAAGAGTGTTTTTGTCAAACTAT------TGTCAAG-TTA--TTTGATTAT--CCCTGGAATTGGGTGCAT-----------TCAAAT--------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/15/2015 at 03:14 PM