ID:

dsi_20120

 Coordinate:

x:13338152-13338303 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.0 -10.6 -10.6

Flybase annnotation

exon [x_13338304_13338442_-]; CDS [x_13338304_13338424_-]; exon [x_13337993_13338151_-]; CDS [x_13337993_13338151_-]; intron [x_13338152_13338303_-]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATTGATTGCACCACTACCATCTGATCACCCGCATCCATGCACATGCACCAGCACACACATAAACACCCACCCACCTACACACACACAACATCCACACCATCCAATCCTGTCCAGGCACTTGGCTTATGCACCTAATTCTACCGCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
**************************************************((((.(((.((.....................))))).))))...(((....))).....................................................((((...(((....((.(((......))).))....))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
.......................................................................TCTGATCACCCGCATCCATGCACATGC.......................................................................................................................................................... 27 0 1 16.00 16 15 0 0 1 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAAGGTCGT..................................................................................................................................................................................................... 22 3 1 16.00 16 0 16 0 0 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCACA............................................................................................................................................................. 24 0 1 9.00 9 7 2 0 0 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCACATGCA......................................................................................................................................................... 28 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCAC.............................................................................................................................................................. 23 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCACATGCAC........................................................................................................................................................ 29 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAAGGTCG...................................................................................................................................................................................................... 21 3 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAA........................................................................................................................................................................................................... 16 1 3 2.00 6 0 6 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACCGCCCACAGTCAGAGTTGAACGT.................................... 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGAACGTTGGTGTAAACTGCGTGGC.................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAAGGTTCT..................................................................................................................................................................................................... 22 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATC..................................................................................................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTCTACCGCCCACAGTCAGAGTTGAACGT.................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCACATGG.......................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........ACCGATCGCCAGGAGGGCTTCCTGT......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................TGCGTGGCAATTTACTGTTCTACCA. 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
......CATCACCGATCGCCAGGAG................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCACAT............................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAAGGTC....................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTCAGAGTTGAACGTTGGTGT.............................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................CACAGTCAGAGTTGAACGTTGGTGTA............................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAAGGT........................................................................................................................................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAACGTTGGTGTAAACTGCGT..................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........ACACAGATCGCCAGGAGGGTTT.............................................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................GGTGTAAACTGCGTGCCAAT............... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................TCTGATCACCCGCATCCATGCATATGC.......................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CTGTCCGGGCACTTGG.............................................................................. 16 1 6 0.33 2 0 0 0 0 0 0 0 0 0 2
....................................GCGCTCCAGCGAAGGTCGTC.................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................CGCTCCAGCGAAGGTCGTCA................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................TCGCGCTCCAGCGAGGGT........................................................................................................................................................................................................ 18 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................TGCACCAGCGCGAACATAAACA....................................................................................................................................... 22 3 10 0.20 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................CTGTCCGGGCACTTG............................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 0 0 1
.....................................................................CATCTGATCAGTCGCAT...................................................................................................................................................................... 17 2 17 0.06 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCCTACCGTCAGGGTTGA........................................ 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..................................TGGCGCTCCAGCGAGGC......................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.................................GTCGCGCTCCAGCGAAAGA........................................................................................................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGAGTAGTAGTGGCTAGCGGTCCTCCCGAAGGACACCGCGAGGTCGCTTCCATAACTAACGTGGTGATGGTAGACTAGTGGGCGTAGGTACGTGTACGTGGTCGTGTGTGTATTTGTGGGTGGGTGGATGTGTGTGTGTTGTAGGTGTGGTAGGTTAGGACAGGTCCGTGAACCGAATACGTGGATTAAGATGGCGGGTGTCAGTCTCAACTTGCAACCACATTTGACGCACCGTTAAATGACAAGATGGAG
**************************************************((((.(((.((.....................))))).))))...(((....))).....................................................((((...(((....((.(((......))).))....))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 M023
head
.................................CAGCGCGAGGTCGCTTCCAGCA..................................................................................................................................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................ACAGCGCGAGGTCGCTTCCA........................................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................CGCGAGGTCGCTTCCAGCAGTA.................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................ACGTTGATTGAGATAGCGGG...................................................... 20 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................GGGGTACGTACGTGAACGTGG....................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................GGTGATGGTAGCCTGGTGGG.......................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................TACGTGGTGGTGGGTGTATT.......................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................GCAGCGCGAGGTCGCTTCCAG....................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................ATAGCGCGAGGTCGCTTCCA........................................................................................................................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................GCAGCGCGAGGTCGCTTC.......................................................................................................................................................................................................... 18 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..................................AGCGCGAGGTCGCTTCCAGCA..................................................................................................................................................................................................... 21 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..............................................................GGTGATGGTAGCCTGGTCGG.......................................................................................................................................................................... 20 3 6 0.67 4 0 0 0 2 0 0 1 1 0 0
.............................................................................................................................................TAGGTGCGGGACGTTAGGACA.......................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0
.............................................................TGGTGATGGTAGCCTGGTCGG.......................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................GTACGTGGTCGTGGGTGT............................................................................................................................................. 18 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................TGTGTGTATGTTGTACGTGTG....................................................................................................... 21 2 13 0.38 5 0 0 0 0 0 5 0 0 0 0
...................................GCGCGAGGTCGCTTCCAGCA..................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTTAGGTTAGGACAG......................................................................................... 16 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GTACGTGGTGGTGTGTGTT............................................................................................................................................ 19 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................TTTGAGGGTGGGTGGATGGCTG...................................................................................................................... 22 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......GTAGTGGCAAGTGGTCCT.................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................CGGCTGTCAGCCTCAGCTTG...................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................AAGTGGTCGCGTTTGTATTTG........................................................................................................................................ 21 3 14 0.14 2 0 0 0 0 0 0 2 0 0 0
..............................................................................................TACGTGGTGGTGGGTGTTTTTG........................................................................................................................................ 22 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................ATTTGTGGGTCGGTGGAGTT......................................................................................................................... 20 3 17 0.12 2 0 0 0 0 0 0 0 2 0 0
................................ACAGCGCGAGGTCGCTTTTA........................................................................................................................................................................................................ 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............................................................................................TGTACGTGGTGGTGGGTGT............................................................................................................................................. 19 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.................................CAGCGCGAGGTCGCGTCA......................................................................................................................................................................................................... 18 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.................................CAGCGCGAGGTCGCT............................................................................................................................................................................................................ 15 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................GGTCTTGCGTGTATTTG........................................................................................................................................ 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
............................................................................................GGTACGTGGTGGTGTGTG.............................................................................................................................................. 18 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................................................GGTGATGGTAGCCTGGTCG........................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GTACGTGCTCGTGTGAG.............................................................................................................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................................................GGTACGTGGTCGTGGGTGT............................................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................GCAGCGCGAGGTCGCTT........................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:13338102-13338353 - dsi_20120 GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCACCAGCACACAC------------AT-----------------------------------------------------------------------------------------------AAACAC--------------------------------------------------------------------CCACCCACCTACACACAC--A-----------------CAAC-------A-----TCCACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----CT------------AATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droSec2 scaffold_20:730844-731093 - GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCACCCGCACACAC------------A---------------------------------------------------------------------------------CAC------------AAACACCCACCCACAC------------------------------------------------------------------------ACAC--A-----------------CAAC-------A-----TCCACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----CT------------AATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
dm3 chrX:14127247-14127503 - GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCTAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACTC-GCATCCATGCACATGCATTAGCAAACAC------------ACACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACCACCCACCCACCC---------------------------------------------------------------------------------------AC-------------------------ACACAAC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----CT------------AATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGAAATTTACTGTTCTACCTC
droEre2 scaffold_4690:12803245-12803498 + GCTCATCATCACCGACCGCCAGGAGGGCTTCCTTTGGCGCTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---A----------------------------------------------------TGGTCACCT-GCGTCCATGCACATGCACCAGCACATGC------------AC-----------------------------------------------------------------------------------------------ACACAC--------------------------------------------------------------------CCACACACATCCA----C--A----------CC-ATCTCACC-------A-----TCCACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----TT------------CATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droYak3 X:8380430-8380691 - GCTCATCATCACCGACCGCCAGGAGGGCTTCCTGTGGCGTTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCACATGCACATGCACGAG-------------------------------------------------------------------------------------TACACAC------------ACACAC--------------------------------------------------------------------CCACACACATCCA----C--ACACCATCCAC---------------------------ACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CACC-A-CT------------CATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droEug1 scf7180000409008:538298-538541 - GCTTATTATAACCGACCGCCAGGAGGGCTTCCTGTGGCGTTCTAGCGAAGGTATGAATA---------------------------------GTT-----------------------GATTGTAC---------------------TCACCC--GCAT-----------------------------------TCACTC-GCATCCATGC--ATGCACTGGCACCTGC------------A------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAC-----------------AT------CCTAGAGCCACCTGC---------------------------ACACA------------------------AATGAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CACA-C-TT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droBia1 scf7180000302041:1180907-1181149 - GCTCATCATCACCGACCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATGCC--------------------------------------------------------------------CC--T---------------------------------------------------------------------C-C----CAGCCATCTGCACTGGCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCCCCACTCC----C-----------------------------------------ATCACA-CCACATCCCCCAGCCCGCACCCGCC------CTGCAATC-CC-----C-AC---CAGG-----------------------------------CACCTGGCTTATG--CAC----TCTCCATATCTGTATATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droTak1 scf7180000414562:39436-39513 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG--TACTTA-CC------------TATTCCACC------------------------------GCCCACAGTCCGAGTTGAGCGTTGGTGCAAACTGCGTGGCAATCTGCTGTTCTACCTC
droEle1 scf7180000491272:1637281-1637553 - GCTCATCATCATCGACCGGCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATGCCC------------------------------------T-----------------------GATTACCGA-CACCCATTAGCTAGGCTGCACAAC----CAT-----------------------------------TC----------CAG---------CTGGCACCTGC------------A------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAC-----------------AA----------------------------CCAC------AATCACAACCACTTCATCCTGTCCTGACCTGTC---CT-GTTCAGTC-CTGTTCAG-TC---CAGG------------CACA-------------------CACTTGGCTTATG--CACACACTT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droRho1 scf7180000770130:11398-11643 + GCTCATTATCATCGACCGCCAGGAGGGATTCCTGTGGCGCTCCAGCGAAGGTATCC-C------------------------------------C-----------------------AATTACACACCACCCAT---CTAGGC-ACTCACC----CAT-----------------------------------TCATTCAGCA-CCGTGCACCTGCACC--------------------------------------------------------------------CTTGCAC-------------------------------------------TC-------------------------------------------------------------AC-----------------------------A-----------------CCAC-------ATCACA-CCACACC------------------------A-CATGTC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----TT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droFic1 scf7180000454073:866793-867057 + GCTCATCATCATTGACCGGCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATCC-C------------------------------------T-----------------------GATTAGACCACT----------------------------------------------------------------------------CATGCACTTGCTCTGGCACTTGCCA--------------------------CCTGC------------ACT-----------CTTGCACCCC-------------------CACCTGCAC------------GAGCACCC----G---------------------------------------------------CAAAAA-T--CC----------A----C--A----------CCCACCCGACCCA------------CTAGAAG------------------------GTCCTGTC-CT-----G-TC---CAGG-----------------------------------CACTCTGCTTATG--CAC----TT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droKik1 scf7180000301542:283926-284189 + GCTCATCTTCAGCGACCGCCAAGAAGGCTTCCTGTGGCGCAGCAGCGAAGGTACGTACATAC------------GTACGAGATAAGCGGTTAGTCAAC-----------------------CGTCC---------------------TATCCCAAGCCATAAATATATCTATATATAAACATATGTGGCCTTGATTACAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCC--G-----------------CCAC-------A-----TACGCA-C------------------------ATACAATC-CT-----GCTT---TCTG-----------------------------------CTCTTGGCTTATG--CAC----TT------------CACTTTGCC------------------------------CCCCACAGTCCGCGTTGAGCGCTGGTGCAAGCTACGTGGCAATTTACTGTTCTACCTC
droAna3 scaffold_12903:459052-459200 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTCCCA-GCATCCAAACACCT-------------C------------AT-----------------------------------------------------------------------------------------------AACCAC--------------------------------------------------------------------CCACACAC----------------CACCAAC---------------------------ACA-----------------------------CAATCACC-----GCTC--ACAGA-----------------------------------TCCTTGGCTTATG--CAC----TC------------CATTCTAC---------------------------------CCACAGTCAGAGTTGAACGGTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
droBip1 scf7180000395328:15951-16118 + CACCTTGTCC--CCCG-----------------------------------CACTT-GACA---------------------------------T-----------------------GCTCATA--T---------------------------------------------------------------TGCTTCCCA-GCATCCAGACACCT-------------C------------AT-----------------------------------------------------------------------------------------------AAACAC--------------------------------------------------------------------CC----------A----C--A---------------------------------------------------------------------CAATCACC-----GCTC--ACAGA-----------------------------------TCCTTGGCTTATG--CAC----TC------------CATTCTAC---------------------------------CCACAGTCAGAGTTGAACGGTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTC
dp5 XL_group1e:8477132-8477464 - GCTCATCGTTACGGATCGCCAGGAGGGATTCCTGTGGCGC---AGTGAAGGTATGTGTACATGCCAGAGGTAGCGCAGCAGATAAGCGGTTAATCACCCAAAACG------------------------------------------TATCCCACG-----------------------TATTTTTAGCCCTGATCACAT-G---CCATGCACATGCACATGCAAATGCAAATGCTCATGC----------------------------------------------------------------------------CATACACACTGACACTGACACAGACACACACCCATGCACAC------------------------------------------------------------------------------------------------TGCTGG-A--------------------------CC---GATAAGTCCAAGTC-CT-----G-TC---CAAG-----------------------------------CACTCTGCTTATATGCACA-ATTC------------CATTCTCCC-----------------------------TTCCCACAGTCAGAGTCGAACGCTGGTGCAAGCTGCGCGGCAATCTGCTGTTTTGCCTA
droPer2 scaffold_13:96028-96360 + GCTCATCGTTACGGATCGCCAGGAGGGATTCCTGTGGCGC---AGTGAAGGTATGTGTACATGCCAGAGGTAGCGTAGCAGATAAGCGGTTAATCACCCAAAACG------------------------------------------TATCCCACG-----------------------TATTTTTAGCCCTGATCACAT-G---CCATGCACATGCACATGCAAATGCAAATGCTCATGC----------------------------------------------------------------------------CATACACACTGACACTGACACAGACACACACCCATGCACAC------------------------------------------------------------------------------------------------TGCTGG-A--------------------------CC---GATAAGTCCAAGTC-AT-----G-TT---CAAA-----------------------------------CACTCTGCTCATAGGAACA-ATTC------------CATTCTACC-----------------------------TTACCACAGTCCTAGTCGAACGCTGGTGCAATCTGCCCGGCAATCTGCTGTTTTGCCTA
droWil2 scf2_1100000004909:7131083-7131252 - GCTTATAATCACAGATCGTCAGGAGGGATTTCTCTGGCGT---AGCGAAGGTATGT-TAAA---------------------------------T-----------------------GTTTGAA--ATTTCAAC---C----------------------------------------------------AGAATATTT-GTAT----GTATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------ATATG--TAT----AT------------TAT---AAA---------------------------T-TTATTTCAGTTCGAGTGCAACGTTGGTGCAAATTGCGAGGCAATTTACTTTTCTATTTG
droVir3 scaffold_12970:2510481-2510883 - GCTGATTATAACTGAGCGCCAGGAGGGCATTTTCTGGCGCAC---CGATGGTGAGTG-------------------------------------C-----------------------AAGCGCGTCTTGATC-C---A----------------------------------------------------CAATTACCC-ACACACACACACACACACACGCATATACCA--------------------------CATGTTTATTTTTGGCTACACTTGCGGGTTCCTTGTCCATTTATTACTTTTGTTTTATGCTTATCACCCACACACACACACACACACACACTCACGCACACCCACATACACACT-----------------GGTACTT-----CCC-----------------------------A-----------------CC------------------------------------------------ATAGATC--AGTCGCT-ATTC-CACGCTCTTCACCCCACTCACCGCCACCTCCACCATCACCTTTTTGCTTATG--CAC----TTTTGCCATTTGTCTCTTGC--------------GCTCCTGCGCCT----CC-AAATACAGTTAAACTGGAATGCTGGTGCAAGCTGCGCGGGAATTTGCTGTTCTATCTG
droMoj3 scaffold_6473:12856128-12856242 + GCTGATTCTAACCGAGCGCCAGACAATCT---TCTGGCGCAC---CGATGGTGAGTA--------------------GTTG-------------------AAGCGCGTCTTAATTATTCATTG---------------------------------------------------------------------------------------------CCCCAGCACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACACACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACAGTCACA---------------------------------------------
droGri2 scaffold_15203:402669-403038 + GCTCATCATAACGGAGCGACAGGAGAGCATTTTCCGTCGC---AGCGATGGTGAGTG--------------------GATGACAAGCAACAGTTCATTCAAC-------------------TCTTC------------------------------------------------------------------AATCA---------CACGCACACACACACG--------------------------ATACATTTAGATGATGATTTTT-----TATTTGCGGGTTCT------ATCTAT-------AATTTCCGCTTATCACCCA--------------------CTCACGT--------------ACTAAACTCACACTCTTTATTGTACTTACATACAT-----------------AT------ACTATATACATACAT---------------------------ATACA------------------------TATAGATC-AAGTAGAT-AT---CACA------------CTCA-------------------CGATTTGCTTATG--CAC----TT------------TTTTTTGGTCATCTCTTGGTGCACATATGTCCGCAAAA-AAATACAGTTAAGCTAGAATGCTGGTGCAAGCTGCGTGGCAATTTACTCTTCTATCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCACCAGCACACAC------------AT-----------------------------------------------------------------------------------------------AAACAC--------------------------------------------------------------------CCACCCACCTACACACAC--A-----------------CAAC-------A-----TCCACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----CT------------AATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27116.0016001500000000100000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2419.00900700000002000000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2817.00700700000000000000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.00500500000000000000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2914.00400400000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC------------------------------GCCCACAGTCAGAGTTGAACGT....................................2612.00200000010001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTTGGTGTAAACTGCGTGGC..................2512.00200000000002000000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACC------------------------------GCCCACAGTCAGAGTTGAACGT....................................2911.00100000010000000000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
..........ACCGATCGCCAGGAGGGCTTCCTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGGCAATTTACTGTTCTACCA.2511.00100000000000010000
......CATCACCGATCGCCAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
......................................................................................................................................T---C----------------------------------------------------TGATCACCC-GCATCCATGCACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGTTGAACGTTGGTGT..............................2111.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCAGAGTTGAACGTTGGTGTA.............................2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTGGTGTAAACTGCGT.....................2111.00100000000001000000
droSec2
GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCACCCGCACACAC------------A---------------------------------------------------------------------------------CAC------------AAACACCCACCCACAC------------------------------------------------------------------------ACAC--A-----------------CAAC-------A-----TCCACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----CT------------AATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...CATCATCACCGATCGCCAGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTTGGTGTAAACTGCGTGGCA.................2611.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAACGTTGGTGTAAAC..........................1911.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTGGTGTAAACTGCGTGGC..................2411.0010010
............CGATCGCCAGGAGGGCTTCCTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
dm3
GCTCATCATCACCGATCGCCAGGAGGGCTTCCTGTGGCGCTCTAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACTC-GCATCCATGCACATGCATTAGCAAACAC------------ACACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACCACCCACCCACCC---------------------------------------------------------------------------------------AC-------------------------ACACAAC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----CT------------AATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGAAATTTACTGTTCTACCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................TGATCACTC-GCATCCATGCACATGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAACGTTGGTGTAAACTG........................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCTCATCATCACCGATCGCCAGGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGTGGCGCTCTAGCGAAGGTAT----------------------------------------T-----------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGGCGCTCTAGCGAAGGTAT----------------------------------------T-----------------------GAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTTGGTGTAAACTGC.......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TCTAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTTGGTGTAAACTGCG......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...........................CTTCCTGTGGCGCTCTAGCGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTGAACGTTGGTGT..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAGTTGAACGTTGGTGTAAAC..........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCAGAGTTGAACGTTGGTGT..............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAGGAGGGCTTCCTGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGTGGCGCTCTAGCGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ACCC---------------------------------------------------------------------------------------AC-------------------------ACACAAC------------------------ATCCAATC-CT-----G-.................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........................................................................................................................................................................................................................TAGCAAACAC------------ACACACAACCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........TCACCGATCGCCAGGAGGGCTTCCTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCAGAGTTGAACGTTGGTGTA.............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC------------------------------GCCCACAGTCAGAGTTGAACGTT...................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAACGTTGGTGTAAACTG........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGGAAATTTACTGTTCTACC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGAACGTTGGTGTAAACTGCGTGGA..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TACCAT---C----------------------------------------------------TGATCACTC-GCATCCATGCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGTAAACTGCGTGGAAA................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTGCGTGGAAATTTACTGT........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....ATCATCACCGATCGCCAGGAGGGCTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCATCATCACCGATCGCCAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TTAGCAAACAC------------ACACACAACCGA-----------------------------------------------------------------------------ACA.........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CA...................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAGGGCTTCCTGTGGCGCTCTAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CAC------------ACACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACC................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ACAC------------ACACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACC................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GGGCTTCCTGTGGCGCTCTAGCGAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCGAAGGTAT----------------------------------------T-----------------------GATTGCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTGGTGTAAACTGCG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......ATCACCGATCGCCAGGAGGGCTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCATCACCGATCGCCAGGAGGGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCAGAGTTGAACGTTGGTG...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----C..............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTCATCATCACCGATCGCCAGGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................C------------ACACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACCACC.............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACCGATCGCCAGGAGGGCTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCGTGGAAATTTACTGTTCT.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................AGGGCTTCCTGTGGCGCTCTAGCGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAACTGCGTGGAAATTTAC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TCCATGCACATGCATTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGAGGGCTTCCTGTGGCGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................C----------------------------------------------------TGATCACTC-GCATCCATGCACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CAC..................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAACGTTGGTGTAAACTGCGTG....................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................ACTACCAT---C----------------------------------------------------TGATCACTC-GCATCCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGGCGCTCTAGCGAAGGTAT----------------------------------------T-----------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTGTGGCGCTCTAGCGAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGTAAACTGCGTG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGGAAATTTACTGTT.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGTTGAACGTTGG.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------AATTCTACC------------------------------GCCCACAGTCAGAGT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCATCACCGATCGCCAGGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGAGTTGAACGTTGGTGTAAACT.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGTTGGTGTAAACTGCGTGG...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCAGGAGGGCTTCCTGTGGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTGAACGTTGGTGTAAAC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ACAACCGA-----------------------------------------------------------------------------ACAAAACCAACCA...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTGCGTGGAAATTTACTGTTC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTGGTGTAAACTGCGTGGAAAT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AACAC------------ACACACAACCGA-----------------------------------------------------------------------------ACAAAACCAAC.................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACCACCCACC.........................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCTTCCTGTGGCGCTCTAGCGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTGGTGTAAACTGCGT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CACACAACCGA-----------------------------------------------------------------------------ACAAAACCAACCACC.............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................C----------------------------------------------------TGATCACTC-GCATCCATGCACATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TGATCACTC-GCATCCATGCACATGCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAGTTGAACGTTGGTGTA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAACGTTGGTGTAAACTGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................TCCTGTGGCGCTCTAGCGAAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGAACGTTGGTGTAAACTGCGTG....................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CACCGATCGCCAGGAGGGCTTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........ACCGATCGCCAGGAGGGCTTCCTGTGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC------------------------------GCCCACAGTCAGAGTTGAACGT....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTGAACGTTGGTGA..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CAACCGA-----------------------------------------------------------------------------ACAAAACCAACCACCCACC.........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAA----...............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTGGCGCTCTAGCGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTTATG--CAC----CT------------AATTCT...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TCTAGCGAAGGTAT----------------------------------------T-----------------------GATTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
....ATCATCACCGATCGCCAGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGAACGTTGGTGTAAACT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGGAGGGCTTCCTGTGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCTCATCATCACCGACCGCCAGGAGGGCTTCCTTTGGCGCTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---A----------------------------------------------------TGGTCACCT-GCGTCCATGCACATGCACCAGCACATGC------------AC-----------------------------------------------------------------------------------------------ACACAC--------------------------------------------------------------------CCACACACATCCA----C--A----------CC-ATCTCACC-------A-----TCCACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----TT------------CATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..TCATCATCACCGACCGCCAGGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.............GACCGCCAGGAGGGCTTCCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
GCTCATCATCACCGACCGCCAGGAGGGCTTCCTGTGGCGTTCCAGCGAAGGTAT----------------------------------------T-----------------------GATTGCACCACTACCAT---C----------------------------------------------------TGATCACCC-GCATCCATGCACATGCACATGCACATGCACGAG-------------------------------------------------------------------------------------TACACAC------------ACACAC--------------------------------------------------------------------CCACACACATCCA----C--ACACCATCCAC---------------------------ACACC------------------------ATCCAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CACC-A-CT------------CATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................AGGGCTTCCTGTGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1713.00300000000003
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGAGTTGAACGTTGGT................................1911.00100000010000
droEug1
GCTTATTATAACCGACCGCCAGGAGGGCTTCCTGTGGCGTTCTAGCGAAGGTATGAATA---------------------------------GTT-----------------------GATTGTAC---------------------TCACCC--GCAT-----------------------------------TCACTC-GCATCCATGC--ATGCACTGGCACCTGC------------A------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAC-----------------AT------CCTAGAGCCACCTGC---------------------------ACACA------------------------AATGAATC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CACA-C-TT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droBia1
GCTCATCATCACCGACCGCCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATGCC--------------------------------------------------------------------CC--T---------------------------------------------------------------------C-C----CAGCCATCTGCACTGGCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCCCCACTCC----C-----------------------------------------ATCACA-CCACATCCCCCAGCCCGCACCCGCC------CTGCAATC-CC-----C-AC---CAGG-----------------------------------CACCTGGCTTATG--CAC----TCTCCATATCTGTATATTCTACC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG--TACTTA-CC------------TATTCCACC------------------------------GCCCACAGTCCGAGTTGAGCGTTGGTGCAAACTGCGTGGCAATCTGCTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droEle1
GCTCATCATCATCGACCGGCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATGCCC------------------------------------T-----------------------GATTACCGA-CACCCATTAGCTAGGCTGCACAAC----CAT-----------------------------------TC----------CAG---------CTGGCACCTGC------------A------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAC-----------------AA----------------------------CCAC------AATCACAACCACTTCATCCTGTCCTGACCTGTC---CT-GTTCAGTC-CTGTTCAG-TC---CAGG------------CACA-------------------CACTTGGCTTATG--CACACACTT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droRho1
GCTCATTATCATCGACCGCCAGGAGGGATTCCTGTGGCGCTCCAGCGAAGGTATCC-C------------------------------------C-----------------------AATTACACACCACCCAT---CTAGGC-ACTCACC----CAT-----------------------------------TCATTCAGCA-CCGTGCACCTGCACC--------------------------------------------------------------------CTTGCAC-------------------------------------------TC-------------------------------------------------------------AC-----------------------------A-----------------CCAC-------ATCACA-CCACACC------------------------A-CATGTC-CT-----G-TC---CAGG-----------------------------------CACTTGGCTTATG--CAC----TT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droFic1
GCTCATCATCATTGACCGGCAGGAGGGCTTCCTGTGGCGCTCCAGCGAAGGTATCC-C------------------------------------T-----------------------GATTAGACCACT----------------------------------------------------------------------------CATGCACTTGCTCTGGCACTTGCCA--------------------------CCTGC------------ACT-----------CTTGCACCCC-------------------CACCTGCAC------------GAGCACCC----G---------------------------------------------------CAAAAA-T--CC----------A----C--A----------CCCACCCGACCCA------------CTAGAAG------------------------GTCCTGTC-CT-----G-TC---CAGG-----------------------------------CACTCTGCTTATG--CAC----TT------------CATTCTCCC------------------------------GCCCACAGTCAGAGTTGAACGTTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droKik1
GCTCATCTTCAGCGACCGCCAAGAAGGCTTCCTGTGGCGCAGCAGCGAAGGTACGTACATAC------------GTACGAGATAAGCGGTTAGTCAAC-----------------------CGTCC---------------------TATCCCAAGCCATAAATATATCTATATATAAACATATGTGGCCTTGATTACAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCC--G-----------------CCAC-------A-----TACGCA-C------------------------ATACAATC-CT-----GCTT---TCTG-----------------------------------CTCTTGGCTTATG--CAC----TT------------CACTTTGCC------------------------------CCCCACAGTCCGCGTTGAGCGCTGGTGCAAGCTACGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
droAna3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTCCCA-GCATCCAAACACCT-------------C------------AT-----------------------------------------------------------------------------------------------AACCAC--------------------------------------------------------------------CCACACAC----------------CACCAAC---------------------------ACA-----------------------------CAATCACC-----GCTC--ACAGA-----------------------------------TCCTTGGCTTATG--CAC----TC------------CATTCTAC---------------------------------CCACAGTCAGAGTTGAACGGTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------CAATCACC-----GCTC--ACAGA-----------------------------------TCCTTGGC.............................................................................................................................2611.001010000
droBip1
CACCTTGTCC--CCCG-----------------------------------CACTT-GACA---------------------------------T-----------------------GCTCATA--T---------------------------------------------------------------TGCTTCCCA-GCATCCAGACACCT-------------C------------AT-----------------------------------------------------------------------------------------------AAACAC--------------------------------------------------------------------CC----------A----C--A---------------------------------------------------------------------CAATCACC-----GCTC--ACAGA-----------------------------------TCCTTGGCTTATG--CAC----TC------------CATTCTAC---------------------------------CCACAGTCAGAGTTGAACGGTGGTGTAAACTGCGTGGCAATTTACTGTTCTACCTCSizeHit CountTotal NormTotal
No Reads
dp5
GCTCATCGTTACGGATCGCCAGGAGGGATTCCTGTGGCGC---AGTGAAGGTATGTGTACATGCCAGAGGTAGCGCAGCAGATAAGCGGTTAATCACCCAAAACG------------------------------------------TATCCCACG-----------------------TATTTTTAGCCCTGATCACAT-G---CCATGCACATGCACATGCAAATGCAAATGCTCATGC----------------------------------------------------------------------------CATACACACTGACACTGACACAGACACACACCCATGCACAC------------------------------------------------------------------------------------------------TGCTGG-A--------------------------CC---GATAAGTCCAAGTC-CT-----G-TC---CAAG-----------------------------------CACTCTGCTTATATGCACA-ATTC------------CATTCTCCC-----------------------------TTCCCACAGTCAGAGTCGAACGCTGGTGCAAGCTGCGCGGCAATCTGCTGTTTTGCCTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................ACCCATGCACAC------------------------------------------------------------------------------------------------TGCTGG-A--------------------------CC---GA.......................................................................................................................................................................................................2311.0010010000000
...........CGGATCGCCAGGAGGGATTCCTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTGGTGCAAGCTGCGCGGC..................2311.0010100000000
droPer2
GCTCATCGTTACGGATCGCCAGGAGGGATTCCTGTGGCGC---AGTGAAGGTATGTGTACATGCCAGAGGTAGCGTAGCAGATAAGCGGTTAATCACCCAAAACG------------------------------------------TATCCCACG-----------------------TATTTTTAGCCCTGATCACAT-G---CCATGCACATGCACATGCAAATGCAAATGCTCATGC----------------------------------------------------------------------------CATACACACTGACACTGACACAGACACACACCCATGCACAC------------------------------------------------------------------------------------------------TGCTGG-A--------------------------CC---GATAAGTCCAAGTC-AT-----G-TT---CAAA-----------------------------------CACTCTGCTCATAGGAACA-ATTC------------CATTCTACC-----------------------------TTACCACAGTCCTAGTCGAACGCTGGTGCAATCTGCCCGGCAATCTGCTGTTTTGCCTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................TTTTAGCCCTGATCACAT-G---CC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
.........TACGGATCGCCAGGAGGGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droWil2
GCTTATAATCACAGATCGTCAGGAGGGATTTCTCTGGCGT---AGCGAAGGTATGT-TAAA---------------------------------T-----------------------GTTTGAA--ATTTCAAC---C----------------------------------------------------AGAATATTT-GTAT----GTATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------ATATG--TAT----AT------------TAT---AAA---------------------------T-TTATTTCAGTTCGAGTGCAACGTTGGTGCAAATTGCGAGGCAATTTACTTTTCTATTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GCTGATTATAACTGAGCGCCAGGAGGGCATTTTCTGGCGCAC---CGATGGTGAGTG-------------------------------------C-----------------------AAGCGCGTCTTGATC-C---A----------------------------------------------------CAATTACCC-ACACACACACACACACACACGCATATACCA--------------------------CATGTTTATTTTTGGCTACACTTGCGGGTTCCTTGTCCATTTATTACTTTTGTTTTATGCTTATCACCCACACACACACACACACACACACTCACGCACACCCACATACACACT-----------------GGTACTT-----CCC-----------------------------A-----------------CC------------------------------------------------ATAGATC--AGTCGCT-ATTC-CACGCTCTTCACCCCACTCACCGCCACCTCCACCATCACCTTTTTGCTTATG--CAC----TTTTGCCATTTGTCTCTTGC--------------GCTCCTGCGCCT----CC-AAATACAGTTAAACTGGAATGCTGGTGCAAGCTGCGCGGGAATTTGCTGTTCTATCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......TATAACTGAGCGCCAGGAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................CAGGAGGGCATTTTCTGGCGCAC---CG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCTGCGCGGGAATTTGCTG.........2311.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CACACACACACACTCACGC....................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
GCTGATTCTAACCGAGCGCCAGACAATCT---TCTGGCGCAC---CGATGGTGAGTA--------------------GTTG-------------------AAGCGCGTCTTAATTATTCATTG---------------------------------------------------------------------------------------------CCCCAGCACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACACACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACAGTCACA---------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCTCATCATAACGGAGCGACAGGAGAGCATTTTCCGTCGC---AGCGATGGTGAGTG--------------------GATGACAAGCAACAGTTCATTCAAC-------------------TCTTC------------------------------------------------------------------AATCA---------CACGCACACACACACG--------------------------ATACATTTAGATGATGATTTTT-----TATTTGCGGGTTCT------ATCTAT-------AATTTCCGCTTATCACCCA--------------------CTCACGT--------------ACTAAACTCACACTCTTTATTGTACTTACATACAT-----------------AT------ACTATATACATACAT---------------------------ATACA------------------------TATAGATC-AAGTAGAT-AT---CACA------------CTCA-------------------CGATTTGCTTATG--CAC----TT------------TTTTTTGGTCATCTCTTGGTGCACATATGTCCGCAAAA-AAATACAGTTAAGCTAGAATGCTGGTGCAAGCTGCGTGGCAATTTACTCTTCTATCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........ACGGAGCGACAGGAGAGCATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCTGGTGCAAGCTGCGTGG...................2311.00110
..........ACGGAGCGACAGGAGAGCATTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/19/2015 at 05:08 PM