ID:

dsi_20104

 Coordinate:

3l:16588017-16588166 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GAACGGTAAAGAACCTGTGTCGCTTCCGCAGCCGATTCGCGAAAATAACACAAAAATAGCCATATATTGTTTTTGCTCAATCAAATAAATTCCACTGCAAGTGCGTATGTGTGTGTTTGTGTTCAGGAAGAGATCAGATAGATCAGAAGCAGTGCAAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTGCAGCATCCGCCATCTCGCTCTGGCAGGCGCGCGTGTAACGGTAGACGTCTCTC
***********************************************************************************************************************(((.(((...(((((((((....((....((..((((...........))))..))))....)))))))))..))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
..........GAACCTGTGTCGCTTCCG.............................................................................................................................................................................................................................. 18 0 1 5.00 5 4 0 1 0 0 0 0 0 0
..................GTCGCTTCCGCAGCCGATT..................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...CGGTAAAGAACCTGTGTCGCTTCC............................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................GTCGCTTCCGCAGCCGAT...................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...CGGTAAAGAACCTGTGTCGCTTCCG.............................................................................................................................................................................................................................. 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0
.........AGAACCTGTGTCGCTTCCG.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AAGCGAAAGTTTTGGTTTTGATTGTGCAG.................................................. 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..ACGGTAAAGAACCTGTGTCGCTTCCG.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTGGTTTTGATTGTGCAGCATC.............................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................TGTTCAGGAAGAGATCAGATAGATCAGA....................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.AACGGTAAAGAACCTGTGTCGCTTCCG.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTTTTGGTTTTGATTGTGCAGC................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................TGTGTTCAGGAAGAGATCAG................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...........AACCTGTGTCGCTTCCGC............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................TTGGTTTTGATTGTGCAGCATCCGC........................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................AAGTTTTGGTTTTGATTGTGCAGC................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............CTGTGTCGCTTCCGCAGCCGATTCGCGA................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....GTAAAGAACCTGTGTCGCT.................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...CGGTAAAGAACCTGTGTCGCTT................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.AACGGTAAAGAACCTGTGTC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......TAAAGAACCTGTGTCGCT.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
GAACGGTAAAGAACCTGTGTCGCTT................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................GCCATATATTGTTTTT................................................................................................................................................................................ 16 0 2 0.50 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................GGCTCGCTCTGGCAGGCGC....................... 19 2 4 0.25 1 0 0 0 0 0 1 0 0 0
.AACGGTAACGAACCT.......................................................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................CGCGCCGGCAGGCGCG...................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.AACGGTAACGAACCTC......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................AGTGCAAGAAAGAAAT.................................................................................... 16 1 20 0.05 1 0 0 0 0 0 1 0 0 0
.AACGGTAATGAACCTC......................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0
...........ACCCTGTGTCGCTTCG............................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
........AAGAACCTCTGTCGG................................................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CTTGCCATTTCTTGGACACAGCGAAGGCGTCGGCTAAGCGCTTTTATTGTGTTTTTATCGGTATATAACAAAAACGAGTTAGTTTATTTAAGGTGACGTTCACGCATACACACACAAACACAAGTCCTTCTCTAGTCTATCTAGTCTTCGTCACGTTCTTTCTTTTCACGTTTCGCTTTCAAAACCAAAACTAACACGTCGTAGGCGGTAGAGCGAGACCGTCCGCGCGCACATTGCCATCTGCAGAGAG
**************************************************(((.(((...(((((((((....((....((..((((...........))))..))))....)))))))))..))).))).*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
............................................................................................................................TCCTTCTCTAGTCTATCT............................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0
..............................................TTGTGTCTTCATCGGTCTATAA...................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0
...............................................TGTGTCTTCATCGGTCTATAA...................................................................................................................................................................................... 21 3 5 0.40 2 2 0 0 0 0 0 0
....................................................TTTTCTCGGGATATAACA.................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................TGCAGTCTGCAGAGAG 16 2 12 0.17 2 0 0 0 2 0 0 0
..................................................................AAAAAAAAGGAGCTAGTTTATT.................................................................................................................................................................. 22 3 9 0.11 1 0 0 0 0 1 0 0
...............................................................TTTAACAATAACGAGTTAG........................................................................................................................................................................ 19 2 11 0.09 1 0 0 0 1 0 0 0
........................................................................................................................CAAGCCCTTCCCTAGTCCA............................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 1 0
.............................................................................................................................CCTTCCCTAGTCCATCAAG.......................................................................................................... 19 3 14 0.07 1 0 0 1 0 0 0 0
......................................................................................................................CTCAAGCCCTTCCCTAGTC................................................................................................................. 19 3 14 0.07 1 0 0 1 0 0 0 0
...........................................................................................................................................................................TTCGATTTCGAACCCAAAAC........................................................... 20 3 15 0.07 1 0 0 0 0 0 0 1
....................................................................AAAAAAGGAGCTAGTTTATT.................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:16587967-16588216 - dsi_20104 GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACA-----CAAAAATAGCCAT-ATATTGTTTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------GTGTGTGTTTGTG-------------------TTCAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTCT---------------------------------------CTC--------
droSec2 scaffold_0:9065630-9065879 - GAACGGTA------AAGAACCTGTGTCAC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACT-----CAAAAATAGCCAT-ATATTGTTTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------GTGTGTGTTTGTC-------------------TTCAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGACA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTAT---------------------------------------CTC--------
dm3 chr3L:17004961-17005210 - GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACA-----CAAAAATAGCCAT-ATATTATTTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------GTGTGTGTTTGTG-------------------TACAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTCT---------------------------------------CTT--------
droEre2 scaffold_4784:16837880-16838127 + GAACGGTA------AAGAACCTGTGTCGT---------------------TTCCGCTGCC---GATTC--GCGAATATAACA-----CAAAAATAGCCAT-CTATTGTGTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TG--TA----------T---------GTGTGTGTTTGTG-------------------TACAGAAGGAAATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACATCT---------------------------------------CTC--------
droYak3 3L:17069064-17069309 + GAACGGTA------AAGAACCTGTGTCGT---------------------TTCCGCTGCC---GATTC--GCGAAAATAACA-----CAAAAATAGCCAT-ATATTGTTTTTGTTCAATCAAAT--AAATTCCACTGC--AA-----G--TG--------------T---------ATGTGTGTTTGTG-------------------TACAGAAAGAAATA---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGATTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTCT---------------------------------------CTC--------
droEug1 scf7180000409711:330593-330829 + GAACGGTA------AAGAACCTGTGTCGT---------------------TTCCGCCGC----GATTC--GCAGAAATAAAA-----CGAAAATAGCCAA-ATACATATTTTTCTCAATCAAATCTAATACCCACTGC--AA-----G--TG---------------------------TGTATATGTG-------------------TACAGGAAAAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAGGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGTCA-----------TCTCACTCTGGCA----GTCGCGCGTG-----------TAACGGTAAACGTCT---------------------------------------CTC--------
droBia1 scf7180000302428:3104575-3104836 + GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCCGC----GATTC--GCAAAAACAACA-----CAAAAATAGCCGTTATATATGTTTTGCTCAATCAAAT--AAAAGCCACTTCAAGT-----G--TGCGCCAGTGAGTGTTTGTGGTGCATG-----G--TGTG-----------------TGTACAGGAAGAGATC---GGGT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGATT----TCGTG-CAG-----CATCCGTCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAACAGCCC---------------------------------------CTC--------
droTak1 scf7180000415352:352700-352937 + GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCCGC----GATTC--GCGAAAATAACA-----CAAAAATAGCCATTATAT---TTTTGCTCAATCAAAT--AAAAGCCACTTC--AACGGTGG--TA--TA----------T---------GT--------GTG-----------------TGTACAGGAAGAGATC---GGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAAACGCCT---------------------------------------CTC--------
droEle1 scf7180000491255:3443593-3443838 - GATCGGTA------AAGAACCTGTGTCGT---------------------TTCCGCCGC----GATTC--GCAAAAAAAACA-----CATAAATAGCCAT-ATATATTTTTTGCTCAATCAAAT--AAG--CCACTGCG-GT-----GTGTG--TA----------T---------GTGTCTGTCTGTG-----------------TGAACAGGAAGAGATC---AAAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------TTCGTG-CAG-----CATCCGCCA-----------TCTCGCTCGGGCA----GGCGCGCGTG-----------TAACGGTAAACACCT---------------------------------------CTCAC------
droRho1 scf7180000779902:58190-58441 + GAACGGTAAAGGTAAAGAACCTGTGTCGT---------------------TTCCGCCGC----GATTC--GCAAAAACAACA-----CAAAAATAGCCAT-ATAT--TTTTTGCTCAATCAAAT--AAG--CCACTGC--GG-----G--TG-------------------------TGTGTGCCTGTG-----------------TGAACAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGCAGAGCA------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCCA-----------TCTCGCTTTGGTC----GGC--GCGTG-----------TAACGGTAAACGCCC---------------------------------------CTCTCTCTCTA
droFic1 scf7180000454113:3599003-3599237 + GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCCGC----GGTTC--GCGAAAATAACA-----CAAAAATAGCCTT-ATAT--TTTTTGCTCAATCAAAT--AAG--CCACTGC--GA-----T--TG-------------------------TGTGCGTCTGTG-----------------TATACAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCTA-----------TCTCGCTTTGGCA----GGCGCGCGTG-----------TAACGGTAAACGCCT---------------------------------------CTC--------
droKik1 scf7180000302486:851750-852050 - GAACGGTA------AAGAACCTGCGTCGA------GACGG---CAGCGATTTCCGCCGC----AATTC--GCAAGAATAACACA---CAAAAATAGCCAT-AT----TTTTTCCCCAATCAAAA------------GC---A-----G--TGAGTT----------TGT-------GTGCGTGTATGTG---------CAAA------TACAGGAAGAGATC---GGATCTGATCTAAAAGAAAAATCG----------------------------------------------AAAGA-----A---------------AATAC-------------------------GGTGTGC---A--AAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCT----GGCGCGCGTGTGTCGCCCGACTAACGGTA-ACGCCTCGCCT----------------CGTCTCGCCTTGCATTGCCTC--------
droAna3 scaffold_13337:13614437-13614756 + AAACGGTA------AAGAACCTGT--CGCTTGTCGGATAG---AAGCGATTTCCGCCGT------TCA--G----------------CAAAAATAGCTTT-ATTT--T------TCTATTAAAA-------------C--GA-----G--TGTGTG----------TGTCGTCTATGT--------GTG----TGTGGCTTTTTTATGCATCAGAAGAGATCATCAT--TTGC--CAAAAAGCAAGAAA----------------GCAAGCAAGCAAGAAGAAGAGAAAGAAGAAGAAGC-----AGTAGTAGCTGAA--AAAT--------------------------------AC---GTAAAAGAAAAGTGCAAAGCGAAAGTT-CG------TTTGTG-CAG-----CATCCGCCT-----------GCTCGCTC----------------GAG-----------TAACGGTA-ACGCCTCCCCCTTAAAGCCTCTGCAACCGGGTCGCCGT-----CGCTC--------
droBip1 scf7180000395832:559413-559671 + AAACGGTA------AAGAACCTGTGTCGCTTGTCGGATAGAAGCAGCGATTTCCGCCGT------TCA--G----------------CAAAAATAGCTTT-ATTT--T------TCTAACAAAA------GTGTGTGC--AT-------------CAG--------T---------GTGTGTGTTCGTG-----------------TGCATCAGAAGAGATC---AT--TTGC--CAAAAAGCAAGGAA----------------------------------------------GAAGA-----AGCATCTG-AGAAAAAAATACATAAAC----------------------GCAA---AAGAAAGAAAAGTGCAAAGCGAAAGTTGTG------ATTGTG-CAG-----CATCCGCCT-----------TCTCGGTC----------------GAG-----------TAACGGTA-ACGCCT---------------------------------------CCC--------
dp5 XR_group8:4838241-4838560 - GAACGGTA------AAGA-CCTGTAGAG---------------CAGCGATTTCCGCCGCTCAGGATGAGGGCAAAAGCAACGCAAAGCAAAAATAGCAAT-AT-------TCATTCAATCAAAT--AAATA--AC--C--AA----------------------------------GTGTGTGTCTGTGAATACTCGGCAAC------TACAGGAAGAGATC---AT--TTGG--CAAAAGAAAGAGAA----------------------------------------------GAAGC-----AGCAGCAGCAGCAAGACATACATACACACACACATACAGATGTAGATGTATGCAGATGCAAAGAAAAGTGCAAAGCGAAAGTT-TA------ATTGTGGCAGCCAAGCATC----ATTTTCTCTAGCTCTCTCTCTGTCTCTATCGCGCGCGTG-----------T--TGGAAAA-------------------------------------------------------
droPer2 scaffold_29:1068667-1068986 - GAACGGTA------AAGA-CCTGTAGAG---------------CAGCGATTTCCGCCGCTCAGGATGAGGGCAAAAGCAACGCAAAGCAAAAATAGCAAT-AT-------TCATTCAATCAAAT--AAATA--AC--C--AA----------------------------------GTGTGTGTCTGTGAATACTCGGCAAC------TACAGGAAGAGATC---AT--TTGG--CAAAAGAAAGAGAA----------------------------------------------GAAGC-----AGCAGCAGCAGCAAGACATACATACACACACACATACAGATGTAGATGTATGCAGATGCAAAGAAAAGTGCAAAGCGAAAGTT-TA------ATTGTGGCAGCCAAGCATC----ATTTTCTCTAGCTCTCTCTCTGTCTCTATCGCGCGCGTG-----------T--TGGAAAA-------------------------------------------------------
droWil2 scf2_1100000004515:3772942-3772998 - A-----------------------------------------------------------------------------------------------------TATTTTTTTTCTTCCCCCATAT--AGACACATACGT--AT-----G--TGCGTG----------T---------GTGTGTGTGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:10153174-10153253 + T---------------------------------------------------------------------------------------------------------------------------------------GC--AT-----G--TG-------------------------TGTGTGTGTGTG-----------------CATACAAGTAAATATA---A-------------------A-------------------------------------------------------------------------------------------------------------------TAAAAAGAAAAGTGCAAAGCGAAAGTT-CA------ATTGTG-TAA-----AATC-----------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:10642386-10642551 - CGACGATA------AT----------------------------------------------------------------CA-----CAGAAATAGCAAT-AT-----------TCAATCAAAA--GAAC--AACAGC--GC-----G--TG-------------------------TGTATTTTGG-----------CTGA------GACAGGAAGAGATC---AT--TCGC--CAAAAAGAGAAAAACAACATCTCTATGTGTGTGAACATATAA------------------GTAAA-----T------------------------------------------------GTGA--ATAAAAAGAAAAGTGCACAGCGAAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:9084252-9084326 - G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTATGCA-------------------TACGAGTAAATGT----------------------AAATAA----------------------------------------------A-----------------------------------------------------------------AAAGAAGAAAAGTGCAAAGCGAAAGTTCC-------ATTGTG-TAA-----AATC-----------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACA-----CAAAAATAGCCAT-ATATTGTTTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------GTGTGTGTTTGTG-------------------TTCAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTCT---------------------------------------CTC--------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................GAACCTGTGTCGC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.00541000000000000000
........................GTCGC---------------------TTCCGCAGCC---GATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
...CGGTA------AAGAACCTGTGTCGC---------------------TTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00220000000000000000
........................GTCGC---------------------TTCCGCAGCC---GAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
...CGGTA------AAGAACCTGTGTCGC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00211000000000000000
...............AGAACCTGTGTCGC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----...........................................................................................................................2911.00100010000000000000
..ACGGTA------AAGAACCTGTGTCGC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTTGATTGTG-CAG-----CATC.......................................................................................................................2211.00100100000000000000
...........................................................................................................................................................................................TG-------------------TTCAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GA..............................................................................................................................................................................................................................................2811.00100000001000000000
.AACGGTA------AAGAACCTGTGTCGC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGTTTTGATTGTG-CAG-----C..........................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................TGTG-------------------TTCAGGAAGAGATC---AG....................................................................................................................................................................................................................................................................................................................2011.00100000000010000000
.................AACCTGTGTCGC---------------------TTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTTGATTGTG-CAG-----CATCCGC....................................................................................................................2511.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................AAGTTTTGGTTTTGATTGTG-CAG-----C..........................................................................................................................2411.00100100000000000000
....................CTGTGTCGC---------------------TTCCGCAGCC---GATTC--GCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.....GTA------AAGAACCTGTGTCGC---------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...CGGTA------AAGAACCTGTGTCGC---------------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.AACGGTA------AAGAACCTGTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......TA------AAGAACCTGTGTCGC---------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
GAACGGTA------AAGAACCTGTGTCGC---------------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...............................................................................................GCCAT-ATATTGTTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000001000000000
.................................................................................................................................................................................................................................................................................................................A------------------------------------------------GTGC---AAGAAAGAAAT...................................................................................................................................................................16200.05100000000001000000
droSec2
GAACGGTA------AAGAACCTGTGTCAC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACT-----CAAAAATAGCCAT-ATATTGTTTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------GTGTGTGTTTGTC-------------------TTCAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGACA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTAT---------------------------------------CTC--------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......TA------AAGAACCTGTGTCAC---------------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.................................................................................................................................................................................................................................................................................................................A------------------------------------------------GTGC---AAGAAAGAAAAGTG................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTTGATTGTG-CAG-----CAT........................................................................................................................2111.0010010
........................GTCAC---------------------TTCCGCAGCC---GATTC--GCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
............................................................................................................................................................................................C-------------------TTCAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAA.............................................................................................................................................................................................................................................2811.0010010
...........................AC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACT-----................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
.AACGGTA------AAGAACCTGTGTCAC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
....................................................................................................................................................................................GTGTTTGTC-------------------TTCAGGAAGAGA...........................................................................................................................................................................................................................................................................................................................2111.0010010
.....................TGTGTCAC---------------------TTCCGCAGCC---GATTC--GCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
GAACGGTA------AAGAACCTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
..............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGTGCAAAGCGAAAGTTTT.................................................................................................................................................2411.0010100
...................................................................................................................................................................................................................................AT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAA........................................................................................................................................................................2411.0010010
.AACGGTA------AAGAACCTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
................GAACCTGTGTCAC---------------------TTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................................CGTA----------T---------GTGTGTGTTTGTC-------------------TTCAGGAAG..............................................................................................................................................................................................................................................................................................................................2711.0010100
dm3
GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCAGCC---GATTC--GCGAAAATAACA-----CAAAAATAGCCAT-ATATTATTTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------GTGTGTGTTTGTG-------------------TACAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTCT---------------------------------------CTT--------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...................CCTGTGTCGC---------------------TTCCGCAGCC---G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TGC--AA-----G--TGCGTA----------T---------GTGTGTG................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................AT--AAATTCCACTGC--AA-----G--TGCGTA----------T---------G......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GCGTA----------T---------GTGTGTGTTTGTG-------------------TACAGGAAG..............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACGGTA------AAGAACCTGTGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGC---------------------TTCCGCAGCC---GATTC--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TA------AAGAACCTGTGTCGC---------------------TTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTG-----------TAACGGTAGACGTCT---------------------------------------...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCTGTGTCGC---------------------TTCCGCAGCC---GATTC--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCA-----------TCTCGCTCTGGCA----......................................................................................1820.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................T---------GTGTGTGTTTGTG-------------------TAC....................................................................................................................................................................................................................................................................................................................................1740.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACGGTA------AAGAACCTGTGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GTA----------T---------GTGTGTGTTTGTG-------------------TA.....................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................TA----------T---------GTGTGTGTTTGTG-------------------TA.....................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................GTA----------T---------GTGTGTGTTTGTG-------------------T......................................................................................................................................................................................................................................................................................................................................18130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
droEre2
GAACGGTA------AAGAACCTGTGTCGT---------------------TTCCGCTGCC---GATTC--GCGAATATAACA-----CAAAAATAGCCAT-CTATTGTGTTTGCTCAATCAAAT--AAATTCCACTGC--AA-----G--TG--TA----------T---------GTGTGTGTTTGTG-------------------TACAGAAGGAAATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGTTTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACATCT---------------------------------------CTC--------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................TTGATTGTG-CAG-----CATCCGCC...................................................................................................................2011.0010100000
.......................................................................................................................................................................................................................................................CA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGA......................................................................................................................................................................2011.0010000100
..................................................................................................................................................................................................................CAGAAGGAAATC---AGAT--------------AGATC...............................................................................................................................................................................................................................................................................................2111.0010000010
......................................................................................................................................................TG--TA----------T---------GTGTGTGTTTGTG-------------------TACAGA.................................................................................................................................................................................................................................................................................................................................2411.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGATTGTG-CAG-----CATCCG.....................................................................................................................2111.0011000000
..........................................................................................................................................................................................................................AATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GT...................................................................................................................................................................................2211.0010000010
.....GTA------AAGAACCTGTGTCGT---------------------TTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCA-----------TCTCGCTCTGGCA----GGCGCGC...............................................................................2511.0011000000
....................................................................................................................................CACTGC--AA-----G--TG--TA----------T---------GTGTGTG................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
...............AGAACCTGTGTCGT---------------------TTCCGCTGCC---G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
............................................................................................ATAGCCAT-CTATTGTGTTTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
GAACGGTA------AAGAACCTGTGTCGT---------------------TTCCGCTGCC---GATTC--GCGAAAATAACA-----CAAAAATAGCCAT-ATATTGTTTTTGTTCAATCAAAT--AAATTCCACTGC--AA-----G--TG--------------T---------ATGTGTGTTTGTG-------------------TACAGAAAGAAATA---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGGATTTGATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAGACGTCT---------------------------------------CTC--------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................AACCTGTGTCGT---------------------TTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGT.............................................................................2911.00100100000000
................................................................................................................................................................................ATGTGTGTTTGTG-------------------TACAGAAAGA.............................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGGATTTGATTGTG-CAG-----CATC.......................................................................................................................2211.00100100000000
.......................TGTCGT---------------------TTCCGCTGCC---GAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
....................................................................................................................................................................................................................GAAAGAAATA---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------.....................................................................................................................................................................................2611.00100000010000
..................ACCTGTGTCGT---------------------TTCCGCTGCC---GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGATTTGATTGTG-CAG-----C..........................................................................................................................2111.00100010000000
.................................................................................................................................................................................................................................AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAG...........................................................................................................................................................................2311.00100001000000
.......................................................................................................................................................G--------------T---------ATGTGTGTTTGTG-------------------TACAGA.................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCA-----------TCTCGCTCTGGC...........................................................................................2011.00100100000000
.......................................................................................................................................................................................................................AGAAATA---AGAT--------------AGATCA----------------------------------------------GAAGC-----......................................................................................................................................................................................................................................2211.00100000010000
droEug1
GAACGGTA------AAGAACCTGTGTCGT---------------------TTCCGCCGC----GATTC--GCAGAAATAAAA-----CGAAAATAGCCAA-ATACATATTTTTCTCAATCAAATCTAATACCCACTGC--AA-----G--TG---------------------------TGTATATGTG-------------------TACAGGAAAAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAGGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGTCA-----------TCTCACTCTGGCA----GTCGCGCGTG-----------TAACGGTAAACGTCT---------------------------------------CTC--------SizeHit CountTotal NormTotal
No Reads
droBia1
GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCCGC----GATTC--GCAAAAACAACA-----CAAAAATAGCCGTTATATATGTTTTGCTCAATCAAAT--AAAAGCCACTTCAAGT-----G--TGCGCCAGTGAGTGTTTGTGGTGCATG-----G--TGTG-----------------TGTACAGGAAGAGATC---GGGT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTGATT----TCGTG-CAG-----CATCCGTCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAACAGCCC---------------------------------------CTC--------SizeHit CountTotal NormTotal
No Reads
droTak1
GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCCGC----GATTC--GCGAAAATAACA-----CAAAAATAGCCATTATAT---TTTTGCTCAATCAAAT--AAAAGCCACTTC--AACGGTGG--TA--TA----------T---------GT--------GTG-----------------TGTACAGGAAGAGATC---GGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCA----GGCGCGCGTG-----------TAACGGTAAACGCCT---------------------------------------CTC--------SizeHit CountTotal NormTotal
No Reads
droEle1
GATCGGTA------AAGAACCTGTGTCGT---------------------TTCCGCCGC----GATTC--GCAAAAAAAACA-----CATAAATAGCCAT-ATATATTTTTTGCTCAATCAAAT--AAG--CCACTGCG-GT-----GTGTG--TA----------T---------GTGTCTGTCTGTG-----------------TGAACAGGAAGAGATC---AAAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------TTCGTG-CAG-----CATCCGCCA-----------TCTCGCTCGGGCA----GGCGCGCGTG-----------TAACGGTAAACACCT---------------------------------------CTCAC------SizeHit CountTotal NormTotal
No Reads
droRho1
GAACGGTAAAGGTAAAGAACCTGTGTCGT---------------------TTCCGCCGC----GATTC--GCAAAAACAACA-----CAAAAATAGCCAT-ATAT--TTTTTGCTCAATCAAAT--AAG--CCACTGC--GG-----G--TG-------------------------TGTGTGCCTGTG-----------------TGAACAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGCAGAGCA------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCCA-----------TCTCGCTTTGGTC----GGC--GCGTG-----------TAACGGTAAACGCCC---------------------------------------CTCTCTCTCTASizeHit CountTotal NormTotal
No Reads
droFic1
GAACGGTA------AAGAACCTGTGTCGC---------------------TTCCGCCGC----GGTTC--GCGAAAATAACA-----CAAAAATAGCCTT-ATAT--TTTTTGCTCAATCAAAT--AAG--CCACTGC--GA-----T--TG-------------------------TGTGCGTCTGTG-----------------TATACAGGAAGAGATC---AGAT--------------AGATCA----------------------------------------------GAAGC-----A------------------------------------------------GTGC---AAGAAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCTA-----------TCTCGCTTTGGCA----GGCGCGCGTG-----------TAACGGTAAACGCCT---------------------------------------CTC--------SizeHit CountTotal NormTotal
No Reads
droKik1
GAACGGTA------AAGAACCTGCGTCGA------GACGG---CAGCGATTTCCGCCGC----AATTC--GCAAGAATAACACA---CAAAAATAGCCAT-AT----TTTTTCCCCAATCAAAA------------GC---A-----G--TGAGTT----------TGT-------GTGCGTGTATGTG---------CAAA------TACAGGAAGAGATC---GGATCTGATCTAAAAGAAAAATCG----------------------------------------------AAAGA-----A---------------AATAC-------------------------GGTGTGC---A--AAAGAAAAGTGCAAAGCGAAAGTTTTG------ATTGTG-CAG-----CATCCGCCA-----------TCTCGCTCTGGCT----GGCGCGCGTGTGTCGCCCGACTAACGGTA-ACGCCTCGCCT----------------CGTCTCGCCTTGCATTGCCTC--------SizeHit CountTotal NormTotal
No Reads
droAna3
AAACGGTA------AAGAACCTGT--CGCTTGTCGGATAG---AAGCGATTTCCGCCGT------TCA--G----------------CAAAAATAGCTTT-ATTT--T------TCTATTAAAA-------------C--GA-----G--TGTGTG----------TGTCGTCTATGT--------GTG----TGTGGCTTTTTTATGCATCAGAAGAGATCATCAT--TTGC--CAAAAAGCAAGAAA----------------GCAAGCAAGCAAGAAGAAGAGAAAGAAGAAGAAGC-----AGTAGTAGCTGAA--AAAT--------------------------------AC---GTAAAAGAAAAGTGCAAAGCGAAAGTT-CG------TTTGTG-CAG-----CATCCGCCT-----------GCTCGCTC----------------GAG-----------TAACGGTA-ACGCCTCCCCCTTAAAGCCTCTGCAACCGGGTCGCCGT-----CGCTC--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GT--CGCTTGTCGGATAG---AAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGGGTCGCCGT-----CGCTC--------2112.002200000
...........................................................................................................................................................................................................................................................................................................................................................................AAAAGAAAAGTGCAAAGC..........................................................................................................................................................1811.001010000
..................ACCTGT--CGCTTGTCGGATAG---AAGCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....................................................................................................................................................................................................................................................................................................................................................................................GTGCAAAGCGAAAGTT-CG------TTTGTG-C..................................................................................................................................2511.001000001
..............................................CGATTTCCGCCGT------TCA--G----------------CAAAAATTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
AAACGGTA------AAGAACCTGTGTCGCTTGTCGGATAGAAGCAGCGATTTCCGCCGT------TCA--G----------------CAAAAATAGCTTT-ATTT--T------TCTAACAAAA------GTGTGTGC--AT-------------CAG--------T---------GTGTGTGTTCGTG-----------------TGCATCAGAAGAGATC---AT--TTGC--CAAAAAGCAAGGAA----------------------------------------------GAAGA-----AGCATCTG-AGAAAAAAATACATAAAC----------------------GCAA---AAGAAAGAAAAGTGCAAAGCGAAAGTTGTG------ATTGTG-CAG-----CATCCGCCT-----------TCTCGGTC----------------GAG-----------TAACGGTA-ACGCCT---------------------------------------CCC--------SizeHit CountTotal NormTotal
No Reads
dp5
GAACGGTA------AAGA-CCTGTAGAG---------------CAGCGATTTCCGCCGCTCAGGATGAGGGCAAAAGCAACGCAAAGCAAAAATAGCAAT-AT-------TCATTCAATCAAAT--AAATA--AC--C--AA----------------------------------GTGTGTGTCTGTGAATACTCGGCAAC------TACAGGAAGAGATC---AT--TTGG--CAAAAGAAAGAGAA----------------------------------------------GAAGC-----AGCAGCAGCAGCAAGACATACATACACACACACATACAGATGTAGATGTATGCAGATGCAAAGAAAAGTGCAAAGCGAAAGTT-TA------ATTGTGGCAGCCAAGCATC----ATTTTCTCTAGCTCTCTCTCTGTCTCTATCGCGCGCGTG-----------T--TGGAAAA-------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................TCCGCCGCTCAGGATGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191119.00119094031156000
...................................................TCCGCCGCTCAGGATGAGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21144.004403221270000
...................................................TCCGCCGCTCAGGATGAGGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22142.0042028111110000
...................................................TCCGCCGCTCAGGATGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20132.003202501015000
...................................................TCCGCCGCTCAGGATGAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.0090500013000
...................................................TCCGCCGCTCAGGATGAGGGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2319.0090700020000
...................................................TCCGCCGCTCAGGATGAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070200023000
....................................................CCGCCGCTCAGGATGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060600000000
....................................................CCGCCGCTCAGGATGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050500000000
...................................................TCCGCCGCTCAGGATGAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050400001000
...................................................TCCGCCGCTCAGGATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040300001000
....................................................CCGCCGCTCAGGATGAGGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040400000000
....................................................CCGCCGCTCAGGATGAGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030300000000
...........................................................................................................................................................................................TGAATACTCGGCAAC------TACAGGA................................................................................................................................................................................................................................................................................................................................2212.0020000000002
................................................ATTTCCGCCGCTCAGGATGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...................................................TCCGCCGCTCAGGATGAGGGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...CGGTA------AAGA-CCTGTAGAG---------------CAGCGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
.............................................GCGATTTCCGCCGCTCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................TCCGCCGCTCAGGATGAGGGCAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
..............................................................................................................................AAATA--AC--C--AA----------------------------------GTGTGTGTCT.............................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................TCCGCCGCTCAGGATGAGGGCAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................GAAGC-----AGCAGCAGCAGCAAGAC.....................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................AATA--AC--C--AA----------------------------------GTGTGTGTCTGT...........................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................TCCGCCGCTCAGGATGAGGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
....................................................CCGCCGCTCAGGATGAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................TCCGCCGCTCAGGATGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................TCCGCCGCTCAGGATGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.AACGGTA------AAGA-CCTGTAGAG---------------CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................TTCCGCCGCTCAGGATGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................ATGTAGATGTATGCAGATGCA..........................................................................................................................................................................2111.0010100000000
...................................................TCCGCCGCTCAGGATGAGGGCAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................CAACGCAAAGCAAAAATAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................ATGTAGATGTATGCAGATGC...........................................................................................................................................................................2011.0010100000000
...........................................................TCAGGATGAGGGCAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................................................................................................................................................................................................................................T--TTGG--CAAAAGAAAGAGAA----------------------------------------------GAAGC-----AG....................................................................................................................................................................................................................................2611.0010010000000
...................................................TCCGCCGCTCAGGATGAGGGCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..ACGGTA------AAGA-CCTGTAGAG---------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................GAATACTCGGCAAC------TACAGGAAGA.............................................................................................................................................................................................................................................................................................................................2411.0010000100000
............................................................CAGGATGAGGGCAAAAGCAACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
.......................................................................................................................................................................................................................................................................................................................................................................GATGCAAAGAAAAGTGCAAAGCGA........................................................................................................................................................2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................................ATACAGATGTAGATGTATGCAGAT.............................................................................................................................................................................2411.0010000100000
...............................................GATTTCCGCCGCTCAGGATGAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.................................................................................................................................................................................................................ACAGGAAGAGATC---AT--TTGG--T...........................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................GG--CAAAAGAAAGAGAA----------------------------------------------GAAGA-----G.....................................................................................................................................................................................................................................2270.1410100000000
droPer2
GAACGGTA------AAGA-CCTGTAGAG---------------CAGCGATTTCCGCCGCTCAGGATGAGGGCAAAAGCAACGCAAAGCAAAAATAGCAAT-AT-------TCATTCAATCAAAT--AAATA--AC--C--AA----------------------------------GTGTGTGTCTGTGAATACTCGGCAAC------TACAGGAAGAGATC---AT--TTGG--CAAAAGAAAGAGAA----------------------------------------------GAAGC-----AGCAGCAGCAGCAAGACATACATACACACACACATACAGATGTAGATGTATGCAGATGCAAAGAAAAGTGCAAAGCGAAAGTT-TA------ATTGTGGCAGCCAAGCATC----ATTTTCTCTAGCTCTCTCTCTGTCTCTATCGCGCGCGTG-----------T--TGGAAAA-------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................TCCGCCGCTCAGGATGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19162.0062014012315
...................................................TCCGCCGCTCAGGATGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20122.00220800122
...................................................TCCGCCGCTCAGGATGAGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.00200104150
...................................................TCCGCCGCTCAGGATGAGGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22118.0018050391
...................................................TCCGCCGCTCAGGATGAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.008000350
...................................................TCCGCCGCTCAGGATGAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.007000340
..ACGGTA------AAGA-CCTGTAGAG---------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
...................................................TCCGCCGCTCAGGATGAGGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002010010
GAACGGTA------AAGA-CCTGTAGAG---------------CAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
...................................................TCCGCCGCTCAGGATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000020
..................................................................................................................................................................................................................................................................................................................................................................ATGCAGATGCAAAGAAAAGTGCA..............................................................................................................................................................2311.001001000
......................................................................................................................................................................................................................................................GAA----------------------------------------------GAAGC-----AGCAGCAGCAGCAAGAC.....................................................................................................................................................................................................................2511.001001000
...................................................TCCGCCGCTCAGGATGAGGGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...................................................TCCGCCGCTCAGGATGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................TCCGCCGCTCAGGATGAGGGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................ATGTAGATGTATGCAGATGCAAA........................................................................................................................................................................2311.001001000
...................................................TCCGCCGCTCAGGATGAGGGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...................................................TCCGCCGCTCAGGATGAGGGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..............AAGA-CCTGTAGAG---------------CAGCGATTTCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................................................TCCGCCGCTCAGGATGAGGGCAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
...................................................TCCGCCGCTCAGGATGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................TCCGCCGCTCAGGATGAGGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.......A------AAGA-CCTGTAGAG---------------CAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTAGCTCTCTCTCTG.............................................................................................1911.001010000
..........................................................................................................................................................................................................................GATC---AT--TTGG--CAAAAGAAAGAGAA----------------------------------------------GAAG............................................................................................................................................................................................................................................2811.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTAGCTCTCTCTCTGTCTCTATCGC...................................................................................2711.001010000
droWil2
A-----------------------------------------------------------------------------------------------------TATTTTTTTTCTTCCCCCATAT--AGACACATACGT--AT-----G--TGCGTG----------T---------GTGTGTGTGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................CACATACGT--AT-----G--TGCGTG----------T---------GT.....................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................................................................................................................................T--AT-----G--TGCGTG----------T---------GTGTGTGTGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------23200.05100100
droVir3
T---------------------------------------------------------------------------------------------------------------------------------------GC--AT-----G--TG-------------------------TGTGTGTGTGTG-----------------CATACAAGTAAATATA---A-------------------A-------------------------------------------------------------------------------------------------------------------TAAAAAGAAAAGTGCAAAGCGAAAGTT-CA------ATTGTG-TAA-----AATC-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................AGAAAAGTGCAAAGCGAAAG.....................................................................................................................................................2011.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AGTT-CA------ATTGTG-TAA-----AAT........................................................................................................................1820.501000000000000000000000000000000000100000000000000000000000000000
droMoj3
CGACGATA------AT----------------------------------------------------------------CA-----CAGAAATAGCAAT-AT-----------TCAATCAAAA--GAAC--AACAGC--GC-----G--TG-------------------------TGTATTTTGG-----------CTGA------GACAGGAAGAGATC---AT--TCGC--CAAAAAGAGAAAAACAACATCTCTATGTGTGTGAACATATAA------------------GTAAA-----T------------------------------------------------GTGA--ATAAAAAGAAAAGTGCACAGCGAAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................ATCAAAA--GAAC--AACAGC--GC-----G--TG-------------------------TG....................................................................................................................................................................................................................................................................................................................................................................2411.001000100
.......................................................................................................................CAAAA--GAAC--AACAGC--GC-----G--TG-------------------------......................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTATGCA-------------------TACGAGTAAATGT----------------------AAATAA----------------------------------------------A-----------------------------------------------------------------AAAGAAGAAAAGTGCAAAGCGAAAGTTCC-------ATTGTG-TAA-----AATC-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:26 PM