ID:dsi_20096 |
Coordinate:3l:11383113-11383184 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -11.5 | -11.2 | -11.2 |
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 |
 |
five_prime_UTR [3l_11383185_11383195_+]; CDS [3l_11383196_11384291_+]; five_prime_UTR [3l_11382921_11383112_+]; exon [3l_11382921_11383112_+]; exon [3l_11383185_11384291_+]; intron [3l_11383113_11383184_+]
No Repeatable elements found
| ##################################################------------------------------------------------------------------------################################################## TGAATAACCGCAAAGTGCTCTGCTTCCGGAGTTCCGGTTTCGAGAGACTGGTAAGTGGCGTGAGACCACCCGCAACAAAAGGAAAAATCAGTTTATATATGTAAATAATGCCGATCCTCTAGATAAACACATAATGTCGTCGACATCGACGGCTGCAGCGAACGCAGCGCCA **************************************************....((((.(((....)))))))......((((.......((((((....))))))........))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR902009 testis |
SRR618934 dsim w501 ovaries |
M024 male body |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................TGCTTCCGGAGTTCCGGTTTCGAGAGAC............................................................................................................................ | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................TTCCGGAGTTCCGGTTTCGAGAGACTG.......................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .....................................................................................................TAAATAATGCCGATCCTCTAG.................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...ATAACCGCAAAGTGCTCTGCTTCCGG............................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................TTCTCCTTCCGGGGTTCCGG....................................................................................................................................... | 20 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...................................................TAAGTGTCGTGAGACA......................................................................................................... | 16 | 2 | 20 | 0.15 | 3 | 0 | 0 | 0 | 3 | 0 | 0 |
| ......................................TTCGAGAGAATGGTA....................................................................................................................... | 15 | 1 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ....................TGGTTCCGGAGTTCC......................................................................................................................................... | 15 | 1 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................GCTAAGTGGCGTAAGA........................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..................................................................................................................................................CGTGGGCTGCAGCTAACGC....... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
|
ACTTATTGGCGTTTCACGAGACGAAGGCCTCAAGGCCAAAGCTCTCTGACCATTCACCGCACTCTGGTGGGCGTTGTTTTCCTTTTTAGTCAAATATATACATTTATTACGGCTAGGAGATCTATTTGTGTATTACAGCAGCTGTAGCTGCCGACGTCGCTTGCGTCGCGGT
**************************************************....((((.(((....)))))))......((((.......((((((....))))))........))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................ATTTGCGTAGTTCAGCAGCTGT........................... | 22 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| .........................................................................................................................................................ACGTCGCTGGCGGCGCGG. | 18 | 2 | 8 | 0.50 | 4 | 4 | 0 | 0 |
| ..................AGACGAAGGCCTGAA........................................................................................................................................... | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 03:12 AM