ID:dsi_20092 |
Coordinate:3r:10206314-10206463 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
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|
|
| -15.3 | -15.2 | -15.2 |
 |
 |
 |
exon [3r_10206464_10206549_-]; five_prime_UTR [3r_10206464_10206549_-]; intron [3r_10204501_10206463_-]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GTGGAGAATATTAACAATTAAGTACGCTAAAAATAAAACCTAGCTAACTGGTCAGCGATGCGAAGAGAAACCGTTAAATTTATTTGTTGTTGTTGCGTGTCTGACAAAAATAGAATTCGCGAAAAGAAATAGAAGGGAAACAGAAATCATTGCCAACCATTCGAAAACAAGACCATTACAACATACGTACATATCTGGGCATAAATGAATATTACTTCTGATTATACATGGGTATATATTTGTTTGTAGT **************************************************(((((..((((((.((.((...((.......))...)).)).))))))..)))))..........(((.......)))...(((((....(((......)))....)).))).......(((....(((.......)))....)))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................CTGACAAAAATAGAATTCGCGTA............................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...........................................................................................................................................................ACCATTCGAAAACAAGACC............................................................................ | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................TTGTCGTTACGTGTCTCACA................................................................................................................................................ | 20 | 3 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................................................................TACGTACATACCAGGGGATA............................................... | 20 | 3 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 |
|
CACCTCTTATAATTGTTAATTCATGCGATTTTTATTTTGGATCGATTGACCAGTCGCTACGCTTCTCTTTGGCAATTTAAATAAACAACAACAACGCACAGACTGTTTTTATCTTAAGCGCTTTTCTTTATCTTCCCTTTGTCTTTAGTAACGGTTGGTAAGCTTTTGTTCTGGTAATGTTGTATGCATGTATAGACCCGTATTTACTTATAATGAAGACTAATATGTACCCATATATAAACAAACATCA
**************************************************(((((..((((((.((.((...((.......))...)).)).))))))..)))))..........(((.......)))...(((((....(((......)))....)).))).......(((....(((.......)))....)))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................GGTGTGAAAGCTTTTGTTCTGG............................................................................ | 22 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ..................................................................................................................................................TGTAACGGTTGGTAAGCTTTT................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .......................................................................................................TTTTTTTATCTTAGGCGCT................................................................................................................................ | 19 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 |
| .............................................................CTTCGCTTTGGCAAT.............................................................................................................................................................................. | 15 | 1 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| ....................................................................................................................................................GAACGGTTGGTAAGC....................................................................................... | 15 | 1 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| .........................................................................................................................................................................TCTAGCAATGTTGTAAGCA.............................................................. | 19 | 3 | 17 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| ...........................AGTTTAATTCTGGATCGATT........................................................................................................................................................................................................... | 20 | 3 | 17 | 0.06 | 1 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:37 AM