ID:dsi_20019 |
Coordinate:3l:7944382-7944453 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7943503_7944381_+]; CDS [3l_7943503_7944381_+]; CDS [3l_7944454_7944588_+]; exon [3l_7944454_7944588_+]; intron [3l_7944382_7944453_+]
No Repeatable elements found
| ##################################################------------------------------------------------------------------------################################################## GCGGCACATTCGAGCTGGAGCCGCTAATGGAACTGCCAGCGGTTAAGATTGTGAGTGCCAAAATAATCTGGTCCCTAACAGAAAACTAGATATGACTATTCCAAATTGCTTTACTCTTCCAGAATCGCGCCAGGCAGCTGTACGCTGCAGGTTTTCAAACCATTGGGGATAT **************************************************..(((((.((((((((((((((............))))))).....)))).....)))...)))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
M023 head |
SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................CGGTTGAGATTCTGAGTGTCA................................................................................................................ | 21 | 3 | 1 | 2.00 | 2 | 0 | 0 | 2 | 0 | 0 |
| .........................................................................................................................GAAACGCGCGAGGCAGCTG................................ | 19 | 2 | 2 | 2.00 | 4 | 4 | 0 | 0 | 0 | 0 |
| .........................................................................................................................GAAACGCGCGAGGCAGCT................................. | 18 | 2 | 3 | 1.33 | 4 | 4 | 0 | 0 | 0 | 0 |
| ......................TTTAATGGAACTGCCAGCGGTTAAGAT........................................................................................................................... | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................TAATGGAACTGCCAGCGGTTAAGATA.......................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........TCGAGCTGGAGCCGCTAATGGAACTT......................................................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ....CACATTCGAGCTGGAGCCGCTTATGGAAC........................................................................................................................................... | 29 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................TGCTGCGGGTTTTCAAACCATTGGGGA... | 27 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ........................TAATGGAACTGCCAGCGGTTAAGAT........................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............TGGAGCCGCTAACGGAACTGCCAGCGGT................................................................................................................................. | 28 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........................TTATGGAACTGCCAGCGGTTAAGAT........................................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .................................................TGTGAGTGCCGAAATA........................................................................................................... | 16 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................CGCGGTTGAGATTCTGAGTG................................................................................................................... | 20 | 3 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................GAAACGCGCGAGGCAGC.................................. | 17 | 2 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................ATGGAGCTGCCAGCG................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................CTAATGGGACTGCCGG..................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................TTCCAGCGGTTAGGAT........................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
|
CGCCGTGTAAGCTCGACCTCGGCGATTACCTTGACGGTCGCCAATTCTAACACTCACGGTTTTATTAGACCAGGGATTGTCTTTTGATCTATACTGATAAGGTTTAACGAAATGAGAAGGTCTTAGCGCGGTCCGTCGACATGCGACGTCCAAAAGTTTGGTAACCCCTATA
**************************************************..(((((.((((((((((((((............))))))).....)))).....)))...)))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|
| ........................................................................................................................GCTTTGCGCGCTCCGTCGAC................................ | 20 | 3 | 11 | 0.09 | 1 | 0 | 1 |
| ............................................................................................................................AGCGCGGTCAGTCGA................................. | 15 | 1 | 11 | 0.09 | 1 | 1 | 0 |
Generated: 04/24/2015 at 10:33 AM