dsi_19971

exon [2r_14624186_14624512_-]; CDS [2r_14624186_14624512_-]; CDS [2r_14623621_14624004_-]; exon [2r_14623583_14624004_-]; intron [2r_14624005_14624185_-]

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GCAACAGCGACAACGACACCACCAACTTCTTCACATGCTACGCCAATGCGGTGAGTTGAAGCTAGAGGATCCTCCAAATGGTGTTTGTTAACATAGATTAGGGTTCAAGTAGTACTCATATGCCCCAACAAGTATAGGTATTTCGCATATGGTAAAAGTCTAGAGACTAGGTCAATTTTTTTTAGACCTAAGCTTTAAAAGTTACTAAAAGTAATCGTTTTAATACCTTAGGCCGAAAGTGATGTATCTGTGATCTACGGCATCGCCACCAATGCCGCCAG ************************************************((((((....((((..(((((((.......(((((....))))).....)))))))...))))))))))((((........))))(((((((..((...((((((.....(((((..((((((((......)).))))))..)))))....))))))...)).........)))))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M053 female body	SRR553487 NRT_0-2 hours eggs	M025 embryo	M024 male body	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	GSM343915 embryo	SRR902009 testis	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	M023 head
.....................................................ATTTGAAGCTAGAGG.....................................................................................................................................................................................................................	15	1	8	10.63	85	0	74	0	0	0	6	0	0	3	2	0
...........................................................................................................................................................................................................................................................GATCCCCGGCATCTCCACCA..........	20	3	12	3.50	42	15	0	0	0	15	0	5	5	0	0	2
.................................................................................................................................................................................................................................................ATGTATCTGTGATCTACGGCATC.................	23	0	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGCAT..................	23	0	1	3.00	3	1	0	0	1	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGC....................	21	0	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GTATCTGTGATCTACGGC....................	18	0	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CGAAAGTGATGTATCTGTGATCTACGGC....................	28	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCCACGGCATCTCCACCA..........	18	2	7	1.14	8	5	0	0	0	2	0	0	1	0	0	0
........................ACTTCTTCACATGCTACGCCAATGCGG......................................................................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGGTGATGTATTTGTGATCGAC.......................	23	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAAGTGATGTATCTGTGATC..........................	20	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................GAAAGTGATGTATCTGTGATCTACGGC....................	27	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..............GACACCACCAACTTCTTCA........................................................................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..AACAGCGACAACGACACCACCAACTT.............................................................................................................................................................................................................................................................	26	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..AACAGCGACAACGACACCACCAACTTCTT..........................................................................................................................................................................................................................................................	29	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................ATCTGTGATCTACGGCATC.................	19	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................TATGGTTCAAGTAGTACTCACCT................................................................................................................................................................	23	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGCATCGC...............	26	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CTGTGATCTACGGCATCGCCACCAATGC......	28	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
........GACAACGACACCACCAACT..............................................................................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................TATGGTTCAAGTAGTACTCAC..................................................................................................................................................................	21	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCCCCGGCATCTCCACCAA.........	19	3	20	0.95	19	0	2	0	0	17	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TGATCCCCGGCATCTCCACCA..........	21	3	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0
..................................ATGCTACGCCAATGCGGCC....................................................................................................................................................................................................................................	19	2	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................GGTATTTCGCGTATTGTA...............................................................................................................................	18	2	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCTCCGGCATCTCCACCA..........	18	2	20	0.45	9	0	0	0	0	5	1	0	2	0	0	1
....................................................................................................................................................................................GTTAGACCTAAGCTT......................................................................................	15	1	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
....................................................GATTTGAAGCTAGAGG.....................................................................................................................................................................................................................	16	1	4	0.25	1	0	0	0	0	0	0	0	0	1	0	0
.........................................................................................................................................GTATTTCGCGTATTGTAA..............................................................................................................................	18	2	4	0.25	1	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................TCAAGTAGTACTAATAGCCC.............................................................................................................................................................	20	3	6	0.17	1	0	0	0	0	0	0	0	0	0	1	0
........................................................CGAAGCTAGAGGAACCT................................................................................................................................................................................................................	17	2	6	0.17	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................CAATAAGCATAGGGATTTCG........................................................................................................................................	20	3	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
......................................................GGTGAAGCTAGAGGA....................................................................................................................................................................................................................	15	1	9	0.11	1	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................TCAAGTCGTACTCATAACC..............................................................................................................................................................	19	3	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ACGGCATCTCCACCA..........	15	1	19	0.11	2	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCCCCGGCATCTCCACCAAT........	20	3	11	0.09	1	0	0	0	0	0	0	0	1	0	0	0
......................................................GTTGAAGTTAGAGGTTC..................................................................................................................................................................................................................	17	2	12	0.08	1	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GTATCTTTGATCAACGGCC...................	19	3	13	0.08	1	0	0	0	1	0	0	0	0	0	0	0
...................................................GGATTTGAAGCTAGAGG.....................................................................................................................................................................................................................	17	2	14	0.07	1	0	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................................................CTAGAGACTCGGTGAAATT.......................................................................................................	19	3	15	0.07	1	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................GTATTTCGCGTATTGTA...............................................................................................................................	17	2	18	0.06	1	0	0	0	0	0	0	0	0	1	0	0

CGTTGTCGCTGTTGCTGTGGTGGTTGAAGAAGTGTACGATGCGGTTACGCCACTCAACTTCGATCTCCTAGGAGGTTTACCACAAACAATTGTATCTAATCCCAAGTTCATCATGAGTATACGGGGTTGTTCATATCCATAAAGCGTATACCATTTTCAGATCTCTGATCCAGTTAAAAAAAATCTGGATTCGAAATTTTCAATGATTTTCATTAGCAAAATTATGGAATCCGGCTTTCACTACATAGACACTAGATGCCGTAGCGGTGGTTACGGCGGTC ************************************************((((((....((((..(((((((.......(((((....))))).....)))))))...))))))))))((((........))))(((((((..((...((((((.....(((((..((((((((......)).))))))..)))))....))))))...)).........)))))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M053 female body	SRR618934 dsim w501 ovaries	GSM343915 embryo	SRR553487 NRT_0-2 hours eggs
.......................................................................................................................................................................................................................................CGGCTTTCACTACATAGACACTAGATG.......................	27	0	1	1.00	1	1	0	0	0
..................................................................CCTAGGAGGTTAACCA.......................................................................................................................................................................................................	16	1	4	0.25	1	0	1	0	0
..................GGTGGGTGAAGAAATGTACGGT.................................................................................................................................................................................................................................................	22	3	6	0.17	1	0	0	1	0
...................................................................................................................................................TCACCATTTTCAGATC......................................................................................................................	16	2	20	0.05	1	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:14623955-14624235 -	dsi_19971	GCAACAGC------GACAACGACACCACCAACTTCTTCACATGCTACGCCAATGCGGTGAGTTGAA-----------------GCTAGAG-------GATCCTCCAAA---------------TGGTGTTTGTTAACATAGATTAGG-GTTCAAGTAGTACTCATATGCCCCAAC-AAGTATAGGTATTT-------------------------------------------------------------------------------------------------------------------------------------------------CGCAT-----------------ATGGTAAAAGTCTAGAGACTAGGTCA----------------------------------------ATTTTTTTTAGACCTAAGCTT--------------------TAAAA---------GTTACT-------------AAAAGTAAT-CGT---TTTAATACCTTAGGC---------CGAAAGTGATGTATCTGTGATCTACGGCATCGCCACCAATGCCGCCAG---------------------------------------------------------------------------------------------------------------
droSec2	scaffold_1:11427351-11427621 -		GCAACAGT------GACAACGACACCACCAACTTCTTCACATGCTACGCCAATGCGGTGAGTTGAA-----------------GCTAGAG-------GATCCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAA---------GTAACT-------------AAATGTAAT-CGT---TTTATTACCTTAGGC---------CGAAAGTGATGTATCTGTGATCTACGGCATCGCCACCAATGCCGCCAGTTCGGCCAGCTCCCTGAGCATGGGCATTCAGGCCATCCAGGACACCGAGTACCAGTGCACCAACACCACGGAGAGCGACTACGTCCGGGATACCGCTGCCACTTACGATCT
dm3	chr2R:13934275-13934555 -		GCAACAGC------GACAACGATACCACCAACTTCTTCAAGTGCTACGCCAATGCGGTGAGTTGAA-----------------GCTAAAG-------GATCTTCCGAA---------------TGATAGTTGTTAACATAGACTAGG-GTTCAAGTAGTACTCATATGCCCCAAC-AAGTATAGGTAATT-------------------------------------------------------------------------------------------------------------------------------------------------CGCAT-----------------ATGGTGAAAGGCCGGAGACTAGGTCA----------------------------------------ATTTT-TTTAGACCTAATCTT--------------------AATGT---------GTTACA------AA-----AAATGT-AT-CGT---TTTATTTCCTTAGGC---------CGAGAGTGATGTATCTGTGATCTATGGCATCGCCACCAATGCCGCCAG---------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4845:8162340-8162589 -		GCAACAGC------GACAACGACACCACTACCTTCTTCAACTGCTACGCCAGTGCGGTGAGTTAAA-----------------GCTAGAT-------GATCCTCCCAC-----------------------------------------------------TCATAGAGCCAAACTAAACGAACGAATTT-------------------------------------------------------------------------------------------------------------------------------------------------CGAATAGTACACCGAATATTTTATGCTGGAAGGTCAAAGACTAGATCA----------------------------------------ATTTA-----------------------------------------TATTTTATA-------------TAAATTTATACTAAT-CGT---ATTATTTCCTAAGGC---------CGAGAGCGATGTCTCTGTGATCTACGACATCGCCACCAATGCCGCCAC---------------------------------------------------------------------------------------------------------------
droYak3	2R:15243494-15243580 +		TTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCT-------------AGAACTAAT-CGT---ATTACTTCCCAAGGC---------TGAGAGTGACGTCTCTGTGATCTACGACATCGCCACCAATGCCGCCAC---------------------------------------------------------------------------------------------------------------
droEug1	scf7180000409672:1157747-1157825 +		TTACTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-CATTATATTAA-CCCACAGGC---------CGAGAATGATATCTCCGTGATATACAACCTTTCCAGCAATGCTGCCAG---------------------------------------------------------------------------------------------------------------
droBia1	scf7180000301754:2604254-2604331 +		ACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATACC-TTT---TTTCTTAACCAAGGC---------TGAAAGTGATGTGTCCGTGATCTACGACATTGCCACCAATGCCGCCAG---------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415795:289167-289239 -		GCAACAGC------GACAACGACACCACCACCTTCTTCAACTGCTACGCCAGTGCGGTAAGTTAGG-----------------AT---------------TCTTCACT---------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------
droEle1	scf7180000491214:272428-272765 +		GCGACAGC------GACAACGACACCACCACCTTCTTCAACTGCTACGCCAGTGCGGTGAGTTGAA-----------------GCTTA---------------CT---------------------------------------ATGAGTT--AATAAT--TTATTGATCAAAGAGAAAATAACTGACTTAACTGAATTTTAGTTTGAGAATGTTATGTCATG------------------------------------------------------------------TTCTAGTTGTTTTATTTTTAAAATTTTTTTTATTTTTTGTTTTTTACTAGTAATATAT----------------------CTAAGATAAGAGTACCTATTTATGAATTGACTTAACAATAAATATTTTATTGGATTAAC-----------------------------------------TATTATAAA-------------TTTATAT---------------GTTTTTCTCACAGGC---------CAACAGTGATGTTTCTGTGTTCTACGACATTGCCACCAACGCCGCCAG---------------------------------------------------------------------------------------------------------------
droRho1	scf7180000779949:169164-169227 +		GCAACAGC------GACAACGACACCACCACCTTCTTCAACTGCTACGCCAGTGCTGTAAGTTGAA-----------------GCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1	scf7180000453948:1499830-1500226 +		GCAACAGC------GACAACGACACCGCCACCTTCTTCAACTGCTACGCCACTGCGGTAAGTTTGTGATAACTGGAGGTGCCAGAAAAGA-------TACTTCCTTAAGAGCAAGAAGTGAGATGGGTTTCA------------TGG-GTTTAAATAACTTACATTTGAAAAAGA-AAATATAA--------CA-AAAGTCAG-TTGAGCATCATAACCCATGAAAATAATCACTATAAAAAAGAACCCATATAATTAGGCTTAAAATATAATATTAATATACAGAAAACTC-------------------------------------------------------------------------------------AGGTTA----------------------------------------TTTCATTTTAATAC---ACTTTGAAAGATCATTTATAAAGCTTTAA---------GTATCCAGATAA-ATAATTCGACCCTTT-ACT---TTTATTATCCCAGGC---------TGAGAGCGACGTTTCCGTGATCTACGACATTGCCACCAACGCCGCCAG---------------------------------------------------------------------------------------------------------------
droKik1	scf7180000302385:736268-736382 -		GG-------------------------------------------------------TGAGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGAGATCTTG------------------------AATA---TCTAAGAGGAACT-------------TTTCATAAACCCT---TTTTTACCTCCAGGC---------TAATGGCGATGTCTCGGTGATCTATGACATTGCCACCAATGCTGCCAG---------------------------------------------------------------------------------------------------------------
droAna3	scaffold_13266:10247935-10248111 +		CCA------------------------TCGATTTCTTCTCATGCTACTCCGAAGCTGTAAGTTAAA-----------------GCTAGAACACGAAATGTCTTCTTAA---------------TAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTATACTATAATAT-------------A----------------------------------------TATTC-----------------------------------------TATACTATA-------------ATAATATATCCTTCT-T------------GTTTAGGGTTCCGAAAATGCAAAAA---------ATATGTACACGATCTCGGCCAATGCTTCC-G---------------------------------------------------------------------------------------------------------------
droBip1	scf7180000396428:673442-673532 +		CTTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG---------ATTTTA-------------AATAATAAT-TGTCAAATTAA-TACCTAGGC---------TGAGGGTGATGTATCTACCATCTATGATATCGCAACCAACGCCGCTAG---------------------------------------------------------------------------------------------------------------
dp5	3:6398470-6398525 -		GCGACAGC------GACAACGACACGAGCACCTTCTTCACCTGCTACGCCAACGCAGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_2:6614339-6614394 -		GCGACAGC------GACAACGACACGAGCACCTTCTTCACCTGCTACGCCAACGCGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2	scf2_1100000004558:2486691-2486751 -		ATGCCTCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGTATCTGTGATCTATGACATTGCCACAAATGCAGCCAG---------------------------------------------------------------------------------------------------------------
droVir3	scaffold_12875:15174339-15174407 +		GCGACAACACCACCGGCAATGACACCGCCAGCTTCTTCAACTGCTACGCGACTGCGGTAAGTGGAA-----------------ACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6496:8656428-8656594 -		GCAACAACAGCACCAGAAATGACAGCACAGCCTTCTTCAGCTGCTACGCAAACGCCGTAAGTGAAA-----------------GTCAAGA-------AACTCGCTCAAGAAA-----------------------------------------------------------------AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAACCCTG-ACT---AATCTCGCTTTAGGC---------TCAAGCCGATGTCTCCATCATCTATGACATTGCCACCAATGCAGCCAG---------------------------------------------------------------------------------------------------------------
droGri2	scaffold_15245:8155492-8155543 -		--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC---------CCAGGGCGATGTCTCTGTGATCTATGACATTGCCACCAATGCGGCGAG---------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GCAACAGC------GACAACGACACCACCAACTTCTTCACATGCTACGCCAATGCGGTGAGTTGAA-----------------GCTAGAG-------GATCCTCCAAA---------------TGGTGTTTGTTAACATAGATTAGG-GTTCAAGTAGTACTCATATGCCCCAAC-AAGTATAGGTATTT-------------------------------------------------------------------------------------------------------------------------------------------------CGCAT-----------------ATGGTAAAAGTCTAGAGACTAGGTCA----------------------------------------ATTTTTTTTAGACCTAAGCTT--------------------TAAAA---------GTTACT-------------AAAAGTAAT-CGT---TTTAATACCTTAGGC---------CGAAAGTGATGTATCTGTGATCTACGGCATCGCCACCAATGCCGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATCTGTGATCTACGGCATC................................................................................................................................	23	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGCAT.................................................................................................................................	23	1	3.00	3	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGC...................................................................................................................................	21	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGC...................................................................................................................................	18	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGTGATGTATCTGTGATCTACGGC...................................................................................................................................	28	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................ACTTCTTCACATGCTACGCCAATGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGATGTATCTGTGATC.........................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGATGTATCTGTGATCTACGGC...................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GACACCACCAACTTCTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..AACAGC------GACAACGACACCACCAACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..AACAGC------GACAACGACACCACCAACTTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGATCTACGGCATC................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGCATCGC..............................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTACGGCATCGCCACCAATGC.....................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............GACAACGACACCACCAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................ATGCTACGCCAATGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GCAACAGT------GACAACGACACCACCAACTTCTTCACATGCTACGCCAATGCGGTGAGTTGAA-----------------GCTAGAG-------GATCCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAA---------GTAACT-------------AAATGTAAT-CGT---TTTATTACCTTAGGC---------CGAAAGTGATGTATCTGTGATCTACGGCATCGCCACCAATGCCGCCAGTTCGGCCAGCTCCCTGAGCATGGGCATTCAGGCCATCCAGGACACCGAGTACCAGTGCACCAACACCACGGAGAGCGACTACGTCCGGGATACCGCTGCCACTTACGATCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGCAT.................................................................................................................................	23	1	25.00	25	0	0	25	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAACACCACGGAGAGC...................................	20	1	12.00	12	0	0	12	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGC...................................................................................................................................	18	1	7.00	7	0	0	7	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATCTGTGATCTACGGC...................................................................................................................................	20	1	6.00	6	0	1	5	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGC...................................................................................................................................	21	1	5.00	5	0	0	5	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTGCACCAACACCACGGAGAGC...................................	26	1	4.00	4	0	0	4	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGCATCGC..............................................................................................................................	23	1	3.00	3	0	1	2	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTACGTCCGGGATACCGC...............	22	1	3.00	3	1	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTCCGGGATACCGC...............	20	1	3.00	3	0	0	3	0
.....................................CACATGCTACGCCAATGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	3	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGCATC................................................................................................................................	21	1	3.00	3	0	0	3	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGGAGAGCGACTACGTCC.........................	21	1	2.00	2	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATTCAGGCCATCCAGG......................................................................	22	1	2.00	2	0	0	2	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAACACCACGGAGA.....................................	18	1	2.00	2	0	0	2	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGCCAGCTCCCTGAGC............................................................................................	20	1	2.00	2	0	0	2	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGCTGCCACTTACG....	18	1	2.00	2	0	0	1	1
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGATGTATCTGTGATCTACGGC...................................................................................................................................	27	1	2.00	2	0	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTCCGGGATACCGCTGCCACT........	27	1	2.00	2	0	0	2	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAGTGCACCAACACCACGGAGAGC...................................	28	1	2.00	2	0	0	2	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTTCGGCCAGCTCCCTGAGC............................................................................................	25	1	2.00	2	0	0	2	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAGGACACCGAGTACCA.........................................................	21	1	2.00	2	0	0	2	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGCAT.................................................................................................................................	20	1	2.00	2	0	0	2	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTATCTGTGATCTACGGC...................................................................................................................................	22	1	1.00	1	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAGTGCACCAACACCACGGAGAG....................................	27	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACGTCCGGGATACCGCT..............	22	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCACGGAGAGCGACTACGTCCGGG......................	26	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCACCAATGCCGCCAGTTC............................................................................................................	23	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACACCACGGAGAGCGACTACGTCC.........................	26	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAGCGACTACGTCC.........................	19	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATCTGTGATCTACGG....................................................................................................................................	19	1	1.00	1	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTACGTCCGGGATACCGCT..............	23	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAACACCACGGAGAGCG..................................	21	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGGCATC................................................................................................................................	24	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTTCGGCCAGCTCCCTGAGCAT..........................................................................................	27	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCACCAACACCACGGAGA.....................................	22	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGGCCATCCAGGACACCGA...............................................................	23	1	1.00	1	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGAGCATGGGCATTCAGGCCATCCA........................................................................	29	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACACCGAGTACCAGT.......................................................	18	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGTGATGTATCTGTGATCTACGG....................................................................................................................................	27	1	1.00	1	0	0	1	0
..............GACAACGACACCACCAACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTTCGGCCAGCTCCCTGAGC............................................................................................	24	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGGGATACCGCTGC............	18	1	1.00	1	0	0	1	0
....................................TCACATGCTACGCCAATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCAGGCCATCCAGGACACCGA...............................................................	24	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCACCAATGCCGCCAGTTCG...........................................................................................................	24	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCCACCAATGCCGCCAGTTCG...........................................................................................................	25	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATCTGTGATCTACGG....................................................................................................................................	20	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGACTACGTCCGGGAT....................	19	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACGGAGAGCGACTACGTCCGG.......................	24	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACGTCCGGGATACCGC...............	21	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------CGAAAGTGATGTATCTGT.............................................................................................................................................	20	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGGACACCGAGTACCAGT.......................................................	22	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCCAGGACACCGAGTACCAGT.......................................................	24	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCCGGGATACCGCTGC............	19	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACCAATGCCGCCAGTTCGGCC........................................................................................................	25	1	1.00	1	0	0	1	0
..................................CTTCACATGCTACGCCAATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGACTACGTCCGGG......................	18	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGCATCGCCAC...........................................................................................................................	26	1	1.00	1	0	0	1	0
.....................................CACATGCTACGCCAATGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTCCGGGATACCGCT..............	18	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTGCACCAACACCACGGAGA.....................................	24	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTACGGCA..................................................................................................................................	19	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCCGGGATACCGCTGCCA..........	21	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGTGATGTATCTGTGAT..........................................................................................................................................	21	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCACGGAGAGCGACTACGTCCGGG......................	27	1	1.00	1	0	0	1	0
....................................TCACATGCTACGCCAATGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGGACACCGAGTACCA.........................................................	20	1	1.00	1	0	0	1	0
..................................CTTCACATGCTACGCCAATGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAGTACCAGTGCACCAACACC............................................	25	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTACGGCATCGCCACC..........................................................................................................................	23	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCAGTTCGGCCAGCTCCCTGAGCAT..........................................................................................	28	1	1.00	1	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCACCAATGCCGCCA................................................................................................................	19	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTTCGGCCAGCTCCCTGAGCATGGGC......................................................................................	31	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATCTGTGATCTACGG....................................................................................................................................	18	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACGTCCGGGATACCGCTGC............	24	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATCTGTGATCTACGGCAT.................................................................................................................................	21	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACGGCATCGCCACCAATGCCGC..................................................................................................................	27	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGGGCATTCAGGCCATCCAG.......................................................................	26	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAACACCACGGAGAGCGACTACGTC..........................	28	1	1.00	1	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTCCGGGATACCGCTGCCACTT.......	28	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGATCTACGGCATCGC..............................................................................................................................	21	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGATCTACGGCATC................................................................................................................................	19	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTACGTCCGGGATACCGCTGCC...........	26	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGGCCAGCTCCCTGAGC............................................................................................	22	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAATGCCGCCAGTTCG...........................................................................................................	19	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAACACCACGGAGAG....................................	19	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGTATCTGTGATCTACGGCAT.................................................................................................................................	25	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTCCCTGAGCATGGGCATTCAGGCC.............................................................................	29	1	1.00	1	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCAGGCCATCCAGGACACCGAGT.............................................................	26	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGATGTATCTGTGAT..........................................................................................................................................	20	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGGCCAGCTCCCTGA..............................................................................................	20	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGGCCAGCTCCCT................................................................................................	18	1	1.00	1	0	0	1	0
...............ACAACGACACCACCAACTTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGACTACGTCCGGGATACCGCT..............	26	1	1.00	1	0	0	1	0
................CAACGACACCACCAACTTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGC---------CGAAAGTGATGTATCTGT.............................................................................................................................................	21	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTCCGGGATACCGCTGCCACTTAC.....	28	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGGCCAGCTCCCTGAGCATGGG.......................................................................................	27	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAGTACCAGTGCAC...................................................	18	2	0.50	1	0	0	1	0

dm3

GCAACAGC------GACAACGATACCACCAACTTCTTCAAGTGCTACGCCAATGCGGTGAGTTGAA-----------------GCTAAAG-------GATCTTCCGAA---------------TGATAGTTGTTAACATAGACTAGG-GTTCAAGTAGTACTCATATGCCCCAAC-AAGTATAGGTAATT-------------------------------------------------------------------------------------------------------------------------------------------------CGCAT-----------------ATGGTGAAAGGCCGGAGACTAGGTCA----------------------------------------ATTTT-TTTAGACCTAATCTT--------------------AATGT---------GTTACA------AA-----AAATGT-AT-CGT---TTTATTTCCTTAGGC---------CGAGAGTGATGTATCTGTGATCTATGGCATCGCCACCAATGCCGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTATGGCATC................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGATGTATCTGTG............................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ACCACCAACTTCTTCAAGTGCTACGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----AAATGT-AT-CGT---TTTATTGG...............................................................................................................................................................................	20	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GCAACAGC------GACAACGACACCACTACCTTCTTCAACTGCTACGCCAGTGCGGTGAGTTAAA-----------------GCTAGAT-------GATCCTCCCAC-----------------------------------------------------TCATAGAGCCAAACTAAACGAACGAATTT-------------------------------------------------------------------------------------------------------------------------------------------------CGAATAGTACACCGAATATTTTATGCTGGAAGGTCAAAGACTAGATCA----------------------------------------ATTTA-----------------------------------------TATTTTATA-------------TAAATTTATACTAAT-CGT---ATTATTTCCTAAGGC---------CGAGAGCGATGTCTCTGTGATCTACGACATCGCCACCAATGCCGCCAC---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACAT.................................................................................................................................	20	1	12.00	12	11	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCG...............................................................................................................................	20	1	12.00	12	4	0	0	1	4	3	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCTCTGTGATCTACGAC...................................................................................................................................	21	1	9.00	9	7	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATC................................................................................................................................	21	1	9.00	9	2	1	0	1	5	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCTCTGTGATCTACGACAT.................................................................................................................................	23	1	5.00	5	3	0	0	0	0	2	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATCG...............................................................................................................................	22	1	4.00	4	1	0	0	0	3	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACAT.................................................................................................................................	18	1	4.00	4	1	0	0	0	1	2	0
..................................CTTCAACTGCTACGCCAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	2	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATC................................................................................................................................	19	1	3.00	3	1	0	0	1	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATCGCCACC..........................................................................................................................	27	1	3.00	3	2	0	0	1	0	0	0
..............GACAACGACACCACTACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	3	0	0	0	0	0	0
..............GACAACGACACCACTACCTTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0
..AACAGC------GACAACGACACCACTACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	1	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTGATCTACGACATCGC..............................................................................................................................	22	1	2.00	2	1	0	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACGACATCGCCACCAATGC.....................................................................................................................	23	1	2.00	2	1	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGCCACCA.........................................................................................................................	26	1	2.00	2	1	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACATCGCCACCAATGC.....................................................................................................................	21	1	2.00	2	2	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGC..............................................................................................................................	21	1	2.00	2	1	0	0	0	1	0	0
....................GACACCACTACCTTCTTCAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0
......................CACCACTACCTTCTTCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGC---------CGAGAGCGATGTCTCTGTG............................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATCTACGACATCGCCACCAATGCCGC..................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTCTGTGATCTACGACATCGC..............................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
....................GACACCACTACCTTCTTCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..AACAGC------GACAACGACACCACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACGACATCGCCACCAATGC.....................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.....AGC------GACAACGACACCACTACCTTCTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
.....AGC------GACAACGACACCACTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0
................CAACGACACCACTACCTTCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACATCGCCACCAATGCCGC..................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCGATGTCTCTGTGATC.........................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTGATCTACGACATCGCCACC..........................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..................................CTTCAACTGCTACGCCAGTGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
......................CACCACTACCTTCTTCAACTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCTCTGTGATCTACGA....................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...........................CTACCTTCTTCAACTGCTACGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
GCAACAGC------GACAACGACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTCTGTGATCTACGAC...................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAGCGATGTCTCTGTGATCTACGA....................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
..............GACAACGACACCACTACCTTCTTCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
...ACAGC------GACAACGACACCACTACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...............ACAACGACACCACTACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTCTCTGTGATCTACGA....................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
..................................CTTCAACTGCTACGCCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTACGACATCG...............................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGCC.............................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.......C------GACAACGACACCACTACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTCTGTGATCTACGACATCG...............................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
GCAACAGC------GACAACGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.....................................CAACTGCTACGCCAGTGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
....................................TCAACTGCTACGCCAGTGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
.................................TCTTCAACTGCTACGCCAGTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.....AGC------GACAACGACACCACTACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGC---------CGAGAGCGATGTCTCTGT.............................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
......GC------GACAACGACACCACTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
.....AGC------GACAACGACACCACTACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACGACATCGCCACCAATGCCGC..................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.............................ACCTTCTTCAACTGCTACGCCAGTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
...............................CTTCTTCAACTGCTACGCCAGTGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATCGCC.............................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCCACCAATGCCGCC.................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
.....AGC------GACAACGACACCACTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0

droYak3

TTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCT-------------AGAACTAAT-CGT---ATTACTTCCCAAGGC---------TGAGAGTGACGTCTCTGTGATCTACGACATCGCCACCAATGCCGCCAC---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATCGCC.............................................................................................................................	24	1	6.00	6	0	3	0	0	0	0	3	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATCGC..............................................................................................................................	23	1	4.00	4	0	3	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACATCGCCACCAATGCCGC..................................................................................................................	24	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACATCGCCACCAATGC.....................................................................................................................	21	1	3.00	3	0	2	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGCC.............................................................................................................................	22	1	3.00	3	2	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTCTGTGATCTACGACAT.................................................................................................................................	23	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGTGACGTCTCTGTG............................................................................................................................................	19	1	2.00	2	0	1	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACGACATCGCCACCAAT.......................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGC..............................................................................................................................	21	1	2.00	2	0	1	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGTGATCTACGACATC................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGC---------TGAGAGTGACGTCTC................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTACGACATCGCCACCAATGC.....................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATCTACGACATCGCC.............................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGATCTACGACATCGC..............................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACGACATCGCCACCAATGCC....................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGCCACCAAT.......................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACGTCTCTGTGATCTAC......................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTCTGTGATCTACGACATCGC..............................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGTGACGTCTCTGTGATCTACGAC...................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTACGACATCGC..............................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTCTGTGATCTACGACATC................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACGACATCGCCACCAAT.......................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCTCTGTGATCTACGA....................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGACGTCTCTGTGATCTACG.....................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACGACATCGCCACC..........................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGACGTCTCTGTG............................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATC................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGCCACC..........................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTCTGTGATCTACGAC...................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTCTGTGATCTACGAC...................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCG...............................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGTGACGTCTCTGTGATCTACGA....................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGCCACCAATGCCGCCA................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACGTCTCTGTGATCTAC......................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACGACATCGCCACCAATGC.....................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACATCGCCACCAATGCCG...................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCTCTGTGATCTACGACAT.................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATC................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTCTGTGATCTAC......................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGTGATCTACGACATCGCCA............................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGCCACCAATGCCGC..................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACATCGCCACCAATGCCGC..................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTCTGTGATCTACGACATCGCC.............................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTACGACATCGCC.............................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTGATCTACGACATCGCCACCA.........................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGACGTCTCTGTGATCTACGAC...................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCTCTGTGATCTACGAC...................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

TTACTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATT-CATTATATTAA-CCCACAGGC---------CGAGAATGATATCTCCGTGATATACAACCTTTCCAGCAATGCTGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATACC-TTT---TTTCTTAACCAAGGC---------TGAAAGTGATGTGTCCGTGATCTACGACATTGCCACCAATGCCGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GCAACAGC------GACAACGACACCACCACCTTCTTCAACTGCTACGCCAGTGCGGTAAGTTAGG-----------------AT---------------TCTTCACT---------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GCGACAGC------GACAACGACACCACCACCTTCTTCAACTGCTACGCCAGTGCGGTGAGTTGAA-----------------GCTTA---------------CT---------------------------------------ATGAGTT--AATAAT--TTATTGATCAAAGAGAAAATAACTGACTTAACTGAATTTTAGTTTGAGAATGTTATGTCATG------------------------------------------------------------------TTCTAGTTGTTTTATTTTTAAAATTTTTTTTATTTTTTGTTTTTTACTAGTAATATAT----------------------CTAAGATAAGAGTACCTATTTATGAATTGACTTAACAATAAATATTTTATTGGATTAAC-----------------------------------------TATTATAAA-------------TTTATAT---------------GTTTTTCTCACAGGC---------CAACAGTGATGTTTCTGTGTTCTACGACATTGCCACCAACGCCGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GCAACAGC------GACAACGACACCACCACCTTCTTCAACTGCTACGCCAGTGCTGTAAGTTGAA-----------------GCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GCAACAGC------GACAACGACACCGCCACCTTCTTCAACTGCTACGCCACTGCGGTAAGTTTGTGATAACTGGAGGTGCCAGAAAAGA-------TACTTCCTTAAGAGCAAGAAGTGAGATGGGTTTCA------------TGG-GTTTAAATAACTTACATTTGAAAAAGA-AAATATAA--------CA-AAAGTCAG-TTGAGCATCATAACCCATGAAAATAATCACTATAAAAAAGAACCCATATAATTAGGCTTAAAATATAATATTAATATACAGAAAACTC-------------------------------------------------------------------------------------AGGTTA----------------------------------------TTTCATTTTAATAC---ACTTTGAAAGATCATTTATAAAGCTTTAA---------GTATCCAGATAA-ATAATTCGACCCTTT-ACT---TTTATTATCCCAGGC---------TGAGAGCGACGTTTCCGTGATCTACGACATTGCCACCAACGCCGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GG-------------------------------------------------------TGAGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGAGATCTTG------------------------AATA---TCTAAGAGGAACT-------------TTTCATAAACCCT---TTTTTACCTCCAGGC---------TAATGGCGATGTCTCGGTGATCTATGACATTGCCACCAATGCTGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CCA------------------------TCGATTTCTTCTCATGCTACTCCGAAGCTGTAAGTTAAA-----------------GCTAGAACACGAAATGTCTTCTTAA---------------TAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTATACTATAATAT-------------A----------------------------------------TATTC-----------------------------------------TATACTATA-------------ATAATATATCCTTCT-T------------GTTTAGGGTTCCGAAAATGCAAAAA---------ATATGTACACGATCTCGGCCAATGCTTCC-G---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGATCTCGGCCAATG......................................................................................................................	20	1	18.00	18	1	1	1	0	14	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGATCTCGGCCAATGCT....................................................................................................................	22	1	8.00	8	1	0	0	0	7	0
.....................................CTCATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	7.00	7	1	1	0	0	5	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACACGATCTCGGC...........................................................................................................................	19	1	6.00	6	4	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACACGATCTCGGCCAATG......................................................................................................................	24	1	5.00	5	3	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGATCTCGGCCAATGC.....................................................................................................................	21	1	5.00	5	1	1	0	0	3	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAA---------ATATGTACACGATCTCGGC...........................................................................................................................	26	1	5.00	5	0	0	0	0	4	1
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACACGATCTCGGCCAATG......................................................................................................................	22	1	5.00	5	4	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGATCTCGGCCAATGCTTCC-................................................................................................................	23	1	4.00	4	0	0	0	0	4	0
.......................................CATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	4.00	4	1	0	0	0	2	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGGCCAATGCTTCC-................................................................................................................	19	1	4.00	4	2	2	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ATATGTACACGATCTCGGC...........................................................................................................................	20	1	4.00	4	2	0	0	0	1	1
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACACGATCTCGGCCAATGCTTCC-G---------------------------------------------------------------------------------------------------------------	27	1	3.00	3	1	0	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGATCTCGGCCAAT.......................................................................................................................	19	1	3.00	3	0	0	0	0	2	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGATCTCGGCCAATGCTTCC-G---------------------------------------------------------------------------------------------------------------	26	1	3.00	3	3	0	0	0	0	0
.............................GATTTCTTCTCATGCTACTCCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	2	1	0	0	0	0
............................CGATTTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	3	0	0	0	0	0
.............................GATTTCTTCTCATGCTACTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	2	1	0	0	0	0
..............................ATTTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	1	0	0	0	1	1
.....................................CTCATGCTACTCCGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	1	0	0	0	2	0
....................................TCTCATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	2	0	0	0	1	0
..................................CTTCTCATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	1	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA---------ATATGTACACGATCTCGGC...........................................................................................................................	24	1	3.00	3	1	0	0	0	0	2
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACACGATCTCGGCCAATGC.....................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGATCTCGGCCAATGC.....................................................................................................................	19	1	2.00	2	1	0	0	0	1	0
..................................CTTCTCATGCTACTCCGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	1	0	0	0	1	0
................................TTCTTCTCATGCTACTCCGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACACGATCTCGGCCAATGC.....................................................................................................................	25	1	2.00	2	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGATCTCGGCCAATGCTT...................................................................................................................	23	1	2.00	2	1	0	0	0	1	0
...............................TTTCTTCTCATGCTACTCCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
............................CGATTTCTTCTCATGCTACTCCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	1	0	1	0	0	0
................................TTCTTCTCATGCTACTCCGAAGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTACACGATCTCGGC...........................................................................................................................	18	1	2.00	2	1	1	0	0	0	0
.............................GATTTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
..............................ATTTCTTCTCATGCTACTCCGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------ATATGTACACGATCTCGGCCAATG......................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
...............................TTTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ATATGTACACGATCTCGGCCAATG......................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
.................................TCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACACGATCTCGGCCAATGCT....................................................................................................................	23	1	2.00	2	0	0	0	0	2	0
.CA------------------------TCGATTTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACACGATCTCGGCCAATG......................................................................................................................	21	1	2.00	2	1	0	0	0	1	0
...............................TTTCTTCTCATGCTACTCCGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGGCCAATGCTTCC-G---------------------------------------------------------------------------------------------------------------	19	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACACGATCTCGGCCAA........................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.....................................CTCATGCTACTCCGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCCGAAAATGCAAAAA---------AT............................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGGCCAATGCTTCC-G---------------------------------------------------------------------------------------------------------------	20	1	1.00	1	1	0	0	0	0	0
..............................ATTTCTTCTCATGCTACTCCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............................GATTTCTTCTCATGCTACTCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................ATTTCTTCTCATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAAAA---------ATATGTACACGATCTCGGCC..........................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.CA------------------------TCGATTTCTTCTCATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGCAAAAA---------ATATGTACACGATCTC..............................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGCAAAAA---------ATATGTACACGATCT...............................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---------ATATGTACACGATCTCGG............................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
................................TTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---------ATATGTACACGATCTCGGCC..........................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACACGATCTCGGCC..........................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.......................................CATGCTACTCCGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACACGATCTCGGCCAAT.......................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACGATCTCGGCCAATGC.....................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---------ATATGTACACGATCTCGGCCAA........................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA---------ATATGTACACGATCTCGGCC..........................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTACACGATCTCGGCCAATGCT....................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTACACGATCTCGGCCAATG......................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
..................................CTTCTCATGCTACTCCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....................................TCTCATGCTACTCCGAAGCTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..................................CTTCTCATGCTACTCCGAAGCTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.....................................CTCATGCTACTCCGAAGCTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
........................................ATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------ATATGTACACGATCTCGGCCAATGC.....................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACACGATCTCGGCCAATGCTTCC-................................................................................................................	26	1	1.00	1	0	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAA---------ATATGTACACGATCTC..............................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.......................................CATGCTACTCCGAAGCTGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
.............................GATTTCTTCTCATGCTACTCCGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACACGATCTCGGCC..........................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.................................TCTTCTCATGCTACTCCGAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.......................................CATGCTACTCCGAAGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
CCA------------------------TCGATTTCTTCTCATGCTACTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGAAAATGCAAAAA---------ATATGT........................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAAAAA---------ATATGTACACGATCTC..............................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ATATGTACACGATCTCGGCCAATGC.....................................................................................................................	26	1	1.00	1	0	0	0	0	1	0
..A------------------------TCGATTTCTTCTCATGCTACTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---------ATATGTACACGATCTCGGCCAAT.......................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
..................................CTTCTCATGCTACTCCGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ATATGTACACGATCTCGGCCAAT.......................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
.............................GATTTCTTCTCATGCTACTCCGAAGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
...............................TTTCTTCTCATGCTACTCCGAAGCTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0
............................CGATTTCTTCTCATGCTACTCCGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.....................................CTCATGCTACTCCGAAGCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
CCA------------------------TCGATTTCTTCTCATGCTACTCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0

droBip1

CTTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG---------ATTTTA-------------AATAATAAT-TGTCAAATTAA-TACCTAGGC---------TGAGGGTGATGTATCTACCATCTATGATATCGCAACCAACGCCGCTAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

GCGACAGC------GACAACGACACGAGCACCTTCTTCACCTGCTACGCCAACGCAGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................CTTCACCTGCTACGCCAACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..............GACAACGACACGAGCACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0

droPer2

GCGACAGC------GACAACGACACGAGCACCTTCTTCACCTGCTACGCCAACGCGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

ATGCCTCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGTATCTGTGATCTATGACATTGCCACAAATGCAGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.......G------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGTATCTGT.............................................................................................................................................	24	1	4.00	4	0	3	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------CGAGGGGGATGTATCTGT.............................................................................................................................................	21	1	2.00	2	0	1	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTATGACATTGCC.............................................................................................................................	20	1	2.00	2	2	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------CGAGGGGGATGTATCTG..............................................................................................................................................	20	1	2.00	2	0	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------CGAGGGGGATGTATCTGTGAT..........................................................................................................................................	24	1	2.00	2	0	1	1	0	0
ATGCCTCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGTATC................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGGGGATGTATCTGT.............................................................................................................................................	18	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCCACAAATGCAGC..................................................................................................................	18	1	1.00	1	0	1	0	0	0
....CTCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGA......................................................................................................................................................	18	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------CGAGGGGGATGTATCTGTGATCT........................................................................................................................................	25	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTATGACATTGCCA............................................................................................................................	21	1	1.00	1	0	1	0	0	0
....CTCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGTATCTGTG............................................................................................................................................	28	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------CGAGGGGGATGTATCTGTGAT..........................................................................................................................................	23	1	1.00	1	0	1	0	0	0
ATGCCTCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGT...................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTATGACATTGCCACAAATG......................................................................................................................	23	1	1.00	1	0	1	0	0	0
.....TCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGTA..................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
.....TCG------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGC---------CGAGGGGGATGT...................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGACATTGCCACAAAT.......................................................................................................................	19	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTGATCTATGACATTGCCA............................................................................................................................	25	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGATCTATGACATTGCC.............................................................................................................................	22	1	1.00	1	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGATGTATCTGTG............................................................................................................................................	18	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGATCTATGACATTGC..............................................................................................................................	19	1	1.00	1	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATGACATTGCCACAAATGCAGCCA................................................................................................................	28	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGATCTATGACATT................................................................................................................................	19	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------CGAGGGGGATGTATCTGTGATCT........................................................................................................................................	26	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATCTATGACATTGC..............................................................................................................................	18	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGGGATGTATCTGTGAT..........................................................................................................................................	20	1	1.00	1	0	0	1	0	0

droVir3

GCGACAACACCACCGGCAATGACACCGCCAGCTTCTTCAACTGCTACGCGACTGCGGTAAGTGGAA-----------------ACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................................CAACTGCTACGCGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CACCGGCAATGACACCGCCAGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......CACCACCGGCAATGACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....AACACCACCGGCAATGACACCGCCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.....................................CAACTGCTACGCGACTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................TCTTCAACTGCTACGCGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TGACACCGCCAGCTTCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................CTTCAACTGCTACGCGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CAGCTTCTTCAACTGCTACGCGACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CACCGGCAATGACACCGCCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
....................................TCAACTGCTACGCGACTGCGGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......CACCACCGGCAATGACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TGACACCGCCAGCTTCTTCAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AACTGCTACGCGACTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..................ATGACACCGCCAGCTTCTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ACCGCCAGCTTCTTCAACTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GCAACAACAGCACCAGAAATGACAGCACAGCCTTCTTCAGCTGCTACGCAAACGCCGTAAGTGAAA-----------------GTCAAGA-------AACTCGCTCAAGAAA-----------------------------------------------------------------AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAACCCTG-ACT---AATCTCGCTTTAGGC---------TCAAGCCGATGTCTCCATCATCTATGACATTGCCACCAATGCAGCCAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.....................ACAGCACAGCCTTCTTCAGCTGCTACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	2	0
.......................AGCACAGCCTTCTTCAGCTGCTACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0
.......................AGCACAGCCTTCTTCAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0

droGri2

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC---------CCAGGGCGATGTCTCTGTGATCTATGACATTGCCACCAATGCGGCGAG---------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_19971

2r:14624005-14624185 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads