ID:dsi_19863 |
Coordinate:3r:10201346-10201495 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10201166_10201345_-]; CDS [3r_10201166_10201345_-]; intron [3r_10201346_10202154_-]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## ATTTTTTTATTTTTAGTTTATATTTTTGGTTTATTCAGAAGAAAAAGCGGTGATATCCGAGTTTTCTGGTTCAAAAGTATTTACATGTATTTTTAATTTGCTGTCTTATCCCTTTGTTTGCGCACATTTTTCATCGAATCTTTTTTGTCTGCCTGTTGGTTCCCACACTGATCCTTAAAAATCGTCATCTTCCTTTACAGCTGGATCGTGATGTGAACGCGGCGCTGGTAAATGACGCCGAGAGCGGTCG **************************************************.(((...(((.((((..((.((((((((((......))))))).(((.(((....................))).)))......((((.....))))...(((....)))........))).))..)))).)))..)))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902008 ovaries |
SRR553486 Makindu_3 day-old ovaries |
M025 embryo |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................TGAGCTGTATCGTGATGTGAACGCGGC........................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................................................................................ATCGTGATGTGAACGCGGC........................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................................................................................................TGTGAACGCGGCGCTGGTAAATGACGC............ | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................TGAGCTGGATCGTGATGTGAACGCGG............................ | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................CCACACTTGTCCTTAAAA...................................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................................................................................ATCCTTAAAAGTCGTC................................................................ | 16 | 1 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 1 |
| ....................................................................................................................................................CGGCCTGTGGGTTCCC...................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................................................TCTTTTTTGTCTGCCAGA.............................................................................................. | 18 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
|
TAAAAAAATAAAAATCAAATATAAAAACCAAATAAGTCTTCTTTTTCGCCACTATAGGCTCAAAAGACCAAGTTTTCATAAATGTACATAAAAATTAAACGACAGAATAGGGAAACAAACGCGTGTAAAAAGTAGCTTAGAAAAAACAGACGGACAACCAAGGGTGTGACTAGGAATTTTTAGCAGTAGAAGGAAATGTCGACCTAGCACTACACTTGCGCCGCGACCATTTACTGCGGCTCTCGCCAGC
**************************************************.(((...(((.((((..((.((((((((((......))))))).(((.(((....................))).)))......((((.....))))...(((....)))........))).))..)))).)))..)))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................CACTTGCGTCGCGACCA..................... | 17 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................................................................................ACCAAGGGTATGACTAG............................................................................. | 17 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................CCAAGGGTATGACTA.............................................................................. | 15 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................................................AGGGGCTGACTAGCAATTTT...................................................................... | 20 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| ............................................................................................................................................................ACCAAGGGTATGACTTG............................................................................. | 17 | 2 | 9 | 0.22 | 2 | 2 | 0 | 0 | 0 |
| ............................................................................................................................................AAAAAACAGCCTGACAACTAA......................................................................................... | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 |
| ............................................................................................................................................................ACCAAGTTTGTGATTAGGAA.......................................................................... | 20 | 3 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 |
| .............................................................................................................................................................CCAAGGGTGTGGCTATG............................................................................ | 17 | 2 | 10 | 0.10 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................................CCAAAGCTGTTACTAGGAA.......................................................................... | 19 | 3 | 17 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| ........................................................................................................................TCGTGTAAGAAGTAGCT................................................................................................................. | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:37 AM