ID:dsi_19766 |
Coordinate:3l:7942939-7943088 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7942336_7942938_+]; CDS [3l_7942336_7942938_+]; intron [3l_7942939_7943502_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- TGGATAAGGCTTTAAGTTCCTTGGATCAAAATGAGGCAGTTGGACTGCAAGTAAGTTTTTAACAAGCGAAATTAAGGTGAAAAGCATGATTAGGCATTTTTTGACGCGACCTTGATGAAAAAGAAAATATTAATTTTGTTAAAACACAGTTTTTTCATTTTATCGTCCGTTTAAACGTATAAATTTCGCGATATTCTCTTGTTTTATTTACTATTCTTTTTTACTTACTTATATCGATGGATCTTTTCTT **************************************************...............((((((((...((.(((((.(((......)))))))).))((((....((((((((((......(((((...))))).......))))))))))...)))).(((....)))....))))))))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR902008 ovaries |
O001 Testis |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................................................TTTTACTTACTTATACCGATGGATCT...... | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........TTAAGTTCCTTGGATCAAAATGAGGC..................................................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TTGGATCAAAATGAGGCAGTTGGAC............................................................................................................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................AATGAGGCAGTTGGAC............................................................................................................................................................................................................. | 16 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................TTCGCGATATTCTCTTGT................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................TTGGATCAAAATGAAGCAGTTGGAC............................................................................................................................................................................................................. | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................TTGGATCAAGATGAGGCAGTA................................................................................................................................................................................................................. | 21 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| TGGATAAGGCTTTAAA.......................................................................................................................................................................................................................................... | 16 | 1 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................TTTTATCGGCCGCTTAAA........................................................................... | 18 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................TGAGAGAGTTGGAGTGCAAGT...................................................................................................................................................................................................... | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| TGGATAAGGCTTTAAAA......................................................................................................................................................................................................................................... | 17 | 2 | 20 | 0.10 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
| ............................................................................................................................AAATACTATTTTTGTTAAACCA........................................................................................................ | 22 | 3 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ......................................................GTTTTTAACAAGAGA..................................................................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
|
ACCTATTCCGAAATTCAAGGAACCTAGTTTTACTCCGTCAACCTGACGTTCATTCAAAAATTGTTCGCTTTAATTCCACTTTTCGTACTAATCCGTAAAAAACTGCGCTGGAACTACTTTTTCTTTTATAATTAAAACAATTTTGTGTCAAAAAAGTAAAATAGCAGGCAAATTTGCATATTTAAAGCGCTATAAGAGAACAAAATAAATGATAAGAAAAAATGAATGAATATAGCTACCTAGAAAAGAA
**************************************************...............((((((((...((.(((((.(((......)))))))).))((((....((((((((((......(((((...))))).......))))))))))...)))).(((....)))....))))))))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
M053 female body |
|---|---|---|---|---|---|---|---|---|
| ..............TCAAGGAACCTGGTTT............................................................................................................................................................................................................................ | 16 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...................................................................................................................................................................................................................ATAAGAAAAAAGGAATG...................... | 17 | 1 | 4 | 0.25 | 1 | 0 | 1 | 0 |
| ...............CAAGGAACCTGGTTT............................................................................................................................................................................................................................ | 15 | 1 | 12 | 0.17 | 2 | 2 | 0 | 0 |
| ..................................................................................................AAAATTGCGCTGGATCT....................................................................................................................................... | 17 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| .....................................................................................................................................AAAACACTATTGTGCCAAAAA................................................................................................ | 21 | 3 | 11 | 0.09 | 1 | 0 | 0 | 1 |
| ................................................................................................AAAAAAATGCGCTTGAAC........................................................................................................................................ | 18 | 2 | 15 | 0.07 | 1 | 0 | 1 | 0 |
| .............ATCAAGGAACCTGGTTT............................................................................................................................................................................................................................ | 17 | 2 | 18 | 0.06 | 1 | 1 | 0 | 0 |
Generated: 04/24/2015 at 10:34 AM