ID:

dsi_19763

 Coordinate:

2l:16310379-16310561 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.5

Flybase annnotation

five_prime_UTR [2l_16310211_16310337_+]; CDS [2l_16310338_16310378_+]; CDS [2l_16310562_16310869_+]; exon [2l_16310562_16310869_+]; exon [2l_16310211_16310378_+]; intron [2l_16310379_16310561_+]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCGCAAAACAAAGAAATATTTTTTCACTGCATGTGCCGCTCGCTGTATCTGCACATACACACACATTTATATAATGGTATTGGGTTGGGGGTAGATACACACACACGAATACGCATTCTGGCTACAACGCCGCATCCTCGTGAATTTTCCTTAACTCTTAACGCCAAAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGA
*******************************************************************************************************************************************((((((((((((...........(((((....((.....(((......)))))....)))))...........))))))))).))).....***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 O001
Testis
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 GSM343915
embryo
..........TGGGACGCAAGAAGAAGAAGGCCTC........................................................................................................................................................................................................................................................ 25 0 1 3.00 3 0 1 1 0 0 1 0 0 0 0 0 0
..TAGGATCATGGGACGCAAGAAGAAGAA.............................................................................................................................................................................................................................................................. 27 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................ACTCTTAACGCCAAAAAC..................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.TTAGGATCATGGGACGCATTTA.................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTCCTTAACTCTTAACGCC........................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GTGAGTTCGATGACGAAAAGATC................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TGGGTTGGGGGTAGATACAC............................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCGATGACGAAA..................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.TTAGGATCATGGGACGCAAGA..................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGTACTGCAACCGTGAGTTCGATGAA......................... 27 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........ATGGGACGCAAGAAGAAGAAG............................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................AGCAACCGTGAGTTCGATGACGAAAAGA.................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................TATATTATGGTATTGGGTT.......................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................TATTATGGTATTGGGTT.......................................................................................................................................... 17 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................................................CGCTGACGTAAAGATCCTGG............ 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TAACTGGAAATACACACACATT............................................................................................................................................................. 22 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TTATATTGTGGTATTGGGT........................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................TAATATTATGGTATTGGGT........................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................ATCATGGTATTGGGTT.......................................................................................................................................... 16 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................GTATGCCGTTGGGGGTAGA................................................................................................................................. 19 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATCCGCATCCTCGTGAAT............................................................................... 18 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GTGAGTTCGATGTCGGA...................... 17 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CGCTGACGTAAAGATCCTG............. 19 3 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................GGTATTGGGTTGAGG...................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................ACTGGTATTGGGTTGGCG...................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................GGCTTCGACGCCGCATCGT...................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................TGAGTACGACGACGAAAAAA.................. 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GTTCGAAGACGAAAA.................... 15 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................AAAGATTCTTGTGCA........ 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAACACGAAGACGCATT........................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

GAATCCTAGTACCCTGCGTTCTTCTTCTTCCGGAGGTTTGGGACCACGACCATAGGAAAAGCGTTTTGTTTCTTTATAAAAAAGTGACGTACACGGCGAGCGACATAGACGTGTATGTGTGTGTAAATATATTACCATAACCCAACCCCCATCTATGTGTGTGTGCTTATGCGTAAGACCGATGTTGCGGCGTAGGAGCACTTAAAAGGAATTGAGAATTGCGGTTTTTGATCCATGACGTTGGCACTCAAGCTACTGCTTTTCTAGGAACACGTCGTGGTCT
*****************************************************((((((((((((...........(((((....((.....(((......)))))....)))))...........))))))))).))).....******************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 O001
Testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
............................................................................................ACGGCGAGCGACATAGACGT........................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................TTGCGGCGTAGGAGCACT................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................TATGTGTGTGTAAATATA........................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0
.....................................TTGGGACCACGACCATAGGAAAA............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................GTTGGCACTCAAGCTACTGCT....................... 21 0 1 1.00 1 1 0 0 0 0 0
..............................CGTAGTTTTGGGACCACG........................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 1 0 0 0 0
..................................................................................AGTGACGTACACAGCGA........................................................................................................................................................................................ 17 1 3 0.33 1 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................ACGCGACTGCATTTCTAGGA.............. 20 3 4 0.25 1 0 0 0 0 1 0
..........................................................................................................................................................................................................TAAAAGGAATTGAGA.................................................................. 15 0 4 0.25 1 0 1 0 0 0 0
.................................................................................................................................................................................ACCGAGGTTGCGGCGTATGG...................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................................CGACTGCATTTCTAGG............... 16 2 20 0.15 3 0 0 0 0 3 0
..................................................................................................................................................................................................................................................GGCAGTCAAGCTACT.......................... 15 1 9 0.11 1 0 0 0 0 0 1
...............................................................................................................................................................................AGACCGAAGCTGCGGCGAAG........................................................................................ 20 3 11 0.09 1 0 1 0 0 0 0
..................................................................................................................................................................................CCGATGCTGCGGCGAAG........................................................................................ 17 2 12 0.08 1 0 1 0 0 0 0
..................................................................................................................................................................................CCGAAGTTGCGGCGAAG........................................................................................ 17 2 13 0.08 1 0 1 0 0 0 0
...........................................................AGCGTTTTGGTCCTTTAT.............................................................................................................................................................................................................. 18 2 17 0.06 1 0 0 0 0 1 0
........GTACCCTGCCTTCTAGTTC................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:16310329-16310611 + dsi_19763 CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAG-----A---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCGCTC-----GCT----------------------GTATCTGCACATA----CACACA---------------CATTTATATAATGGTATTGGGTT-------------GGGGG-TAGATACACACACACG----------------AATACGCATT------------------------------------------------------------------------------------------------CTGGCTACAACGCCG---------------CATC--CTC--GTG----------AATTTTCCTTAACTCTTAACGCC----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGA
droSec2 scaffold_7:390442-390724 + CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAG-----A---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCGCTT-----GCT----------------------GTATCTGCACATA----CACTCG---------------CATTTATATAATGGTATTGGGTT-------------GGGGG-TAGATACACACACACG----------------TATATGCATT------------------------------------------------------------------------------------------------CTGGCTACAACGCCG---------------CATC--CTC--GTG----------AATTTTCCTTAACTCTTAACGCC----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGA
dm3 chr2L:16743521-16743809 + CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAG-----A---TA------TAAA------TA-T---------------------TTT----TTCACTGCATGTG--CCGCTC-----GCT----------------------GTATCTGCACATA----CACACA---------------CATTTATATAATGGTATTGGGTT-------------GGGGG-TAGATACACACACACA--------------TGTATATGCATA------------------------------------------------------------------------------------------------CTGGCTACAACGCCG---------------CATC--CCC--GTG----------AATTTTCCTTAACTCTTAACGCA----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGA
droEre2 scaffold_4845:19815198-19815472 + der_1194 CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----C---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCGCCC-----GCT----------------------GTATCTGCACATA----CACTCA---------------CATTTATATAATGGTATTGGGTT-------------GGGGGGGAGATACATACACACA------------------------TA------------------------------------------------------------------------------------------------TTGGCTACAACGCCG---------------CATC--CTC--GGG----------AATTTTCCTTAACTCTTAACGCT-------AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATTCTTGTGCAACACCAGA
droYak3 2R:4358871-4359145 - CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----A---A----------A------TA-T---------------------TTT----TTCACTGCGTGTG--CCGCTC-----GCT----------------------GTATCTGCACATA----CACTCA---------------CATTTATATAATGGTATTGTATT-------------GGGGG-GAGATACATACACACA------------------------TA------------------------------------------------------------------------------------------------CTGGGTACAACGCCG---------------CTTC--CTC--GGG----------AATTTTCCTTAACTCTTAACGCC----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAACACCAGA
droEug1 scf7180000408961:316549-316804 + TATTAGACCATGGGACGCAAGAAGAAGAAGGCCTCAAAACCATGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----A---AC-------A-A-----CTA-T---------------------TTT----TCAACGGCATGTG--TCGTTG-----GCT----------------------GTATCTCCACATA----CACACA---------------AATTTATATAATGGTATTGGGCC-------------GGGGG------------------------------------------------------------------------------------------------------------------------------G---------------GCCACATATCCA---------------CATC--CTC-CATA----------AATTTTCCTTAACTCTTAGC--T-------AAAACTAGGTACTGCAACCGTGAATTCGACGACGAGAAGATCCTGGTCCAGCACCAGA
droBia1 scf7180000301468:910289-910586 + CTTCAAGCCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----A---AC-------A-AA----CT-TT---------------------TTT--CCTCCACGGCATGTG--CCGCTG-----GCT----------------------GTATCTCCACATACATACACACA---------------AATTTATATAATGGTGTTGGGGT-------------G-------------------------------------------------------------------------CTCCAAAAGGATAGTGAGAGGGAG------GGAGGGGA-------AGGGGGA-TAGAG-----------------------GCCA---------------CATCTCCTC-GAGA----------AATTTTCCTTGACTCTTAAC--T----GA-AAATCTAGGTACTGCAACCGAGAGTTCGACGACGAGAAGATCCTGGTGCAGCACCAGA
droTak1 scf7180000415914:480774-481065 + CTTTGAATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----C---AC-------A-AA----GT-TT---------------------TTT----TCCACGACATGTG--CCGCTG-----GCT----------------------GTATCTCCACATACATACACACA---------------AATTTATGTAATGGTATTG--TT-------------GGAGG-AA-----------------------------------------------------------------------------------------G------GG-TGGGAGGTTTACAGGGG-A-AAGTGGACACA-----------------TACA---------------TATATTCC--GGAA----------AATATTCCTTAACTCCTAAC--TAAAAAAAAAAACTAGGTACTGCAACCGAGAGTTCGACGATGAGAAGATCCTGGTGCAGCACCAGA
droEle1 scf7180000490579:600002-600266 - CTTCGAATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTTG--CAAAACAAAC-----G---AC-------A-AA----CT-TT---------------------TTT-T--CCCACGGCATGTG--CCGCTG-----GCT-------------------------TCTCCACATA----CACACA---------------AATTTATATAATGGTATTGGGCA-----------GTG--------------------------------------------------------------------------------------------------------A-TGGGA-------AGGGGAAAAAGGG-----------------------GCCA---------------CATC--TCCAGGGG----------AATTTTCCTTAACTCTTAAC--T----A--AAAACTAGGTACTGCAACCGCGAATTCGACGACGAGAAGATCCTGGTGCAGCACCAGA
droRho1 scf7180000768553:62196-62452 + CATCAAACCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTTG--CAAAACAAAC-----G---AC-------A-AA-----TATT---------------------TTT----TTCACGGCATGTG--CCGCTT-----GCT----------------------GTGTCTCCACATA----CACACA---------------AATTTATATAATGGTATTGGGCA-----------GTGGGGG-GGGAT------------------------------------------------------------------------------------------------------------------------------------------------GCCA---------------CATC--TCCGGGGG----------AATTTTCCTTAACTCTTAAC--T----G--AAAACTAGGTACTGCAACCGCGAATTCGACGACGAGAAGATCCTGGTACAGCACCAGA
droFic1 scf7180000454078:669451-669715 + CTTCGCATAATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--AAAAACTATC-----A---AC-------A-AA----GT-TC-A-------------------TTT----TCCACGGCATGTG--CCGCTG-----GCT----------------------GTATCTCCACATA----CACACA---------------AATTTATATAATTGTGTTGGTTTGGTTGTGTATAGTAGGGG------------------------------------------------------------------------------------------------------------------------------G-----------------------TCCA---------------CATC--TTC--A-A---AAT----TTTTTTCCTTAACTCTTAAC--T----A--AAAACTAGGTACTGCAACCGAGAGTTCGATGATGAGAAAATTCTGGTACAGCACCAGA
droKik1 scf7180000302472:7040-7329 + CTTGGAGCCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCA--AAAAACAAAC-----T---GC-------A-AA----AC-TGCG-------------------TTG----TCCACGGCATGTGCGCCGCTG-----GCTGGGAGGGCGAGTGAAAAAATTTGTATCTACACATA----CACGCT---------------CATTTATATAATGGTATTGT--G-------------GG------------------------------------------------------------------CAGGGGCTC--------------------TGGGGC----------------------AGAGGGG-----------------------TCCA---------------CA----------------GATTGGCATTTTCCTTAACTCCCAGC--G----AA-AAATCTAGGTACTGCAACCGCGAGTTCGACGACGAGAAGATCCTGGTGCAGCACCAGA
droAna3 scaffold_12916:7300805-7301078 + CTTGAAGCTATGGGACGCAAGAAGAAGAAGGCCTCAAAGCCCTGGTGCTGGTATCCTTTTCA---AAAACAATG-----A---GC-------A-AA----GT-TT---------------------TTTTTCCCTCACGGCATGTG--CCGCTG-----CCTGGGAGGC-AAACGAGAAAATTTGTATCTACACATA----CACCCA---------------AATTTATATAATGGGAAT----C-------------GGGGG-G----------------------------------------------------------------------------------------------GC----------------------AAAATA-----TATACATTT--------------------------------------------GTGTCTTGGCATTTTCCTTAACTCCCTA---------------CTAGGTACTGCAACCGTGAGTTCGACGATGAGAAGATCCTTGTGCAGCACCAGA
droBip1 scf7180000396566:471470-471743 + CTTGAAGCTATGGGACGCAAGAAGAAGAAGGCCTCAAAACCCTGGTGCTGGTATCCTTTTCA---AAAACAAAT-----C---GC-------A-AA----GT-TT---------------------TTT-TCCCTCACGGCATGTG--CCGCTG-----CCTGGGAGGC-AAACGAGAAAATTTGTATCTACACATA----CACATA---------------TATTTATATAATGGGAA----AC-------------GGGGG------------------------------------------------------------------------------------------------GT----------------------AAAAGG-----TACATATTT------------------------------------C--G----GTGTCTTGGCATTTTCCTTAACTCCTTA---------------CTAGGTACTGCAACCGTGAGTTTGACGATGAGAAGATCCTTGTGCAGCACCAGA
dp5 4_group3:3039715-3039993 - TTTCAAATCATGGGTCGCAAAAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTT---TAAAACAAAC-----A---AC-------A-A------TA-T---------------------TT-----TTCCCAGCATGTG--CCGCTA-----GCTGGTAGG----GCAAAAAAATTTGTATGTACACATA----CAAAC-CACTCACACAGGAGAAATTTATATAATGGTGTTGGCAA-------------GGGGG-------------------------------------------------------------------------------------------------C----AGG-----------------------------------------------------AAGAA---CG-----------G----ATATTTTGGCATTTTCCTTAACTCATT----T-------AAAAC-AGGTACTGCAACCGTGAGTTCGACGATGAAAAAATCCTGGTGCAACATCAAA
droPer2 scaffold_1:4526719-4526997 - TTTCAAATCATGGGTCGCAAAAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTT---TAAAACAAAC-----A---AC-------A-A------TA-T---------------------TT-----TTCCCAGCATGTG--CCGCTA-----GCTGGTAGG----GCAAAAAAATTTGTATGTACACATA----CAAAC-CACTCACACAGGAGAAATTTATATAATGGTGTTGGCAA-------------GGGGG-------------------------------------------------------------------------------------------------C----AGG-----------------------------------------------------AAGAA---CG-----------G----ATATTTTGGCATTTTCCTTAACTCATT----T-------AAAAC-AGGTACTGCAACCGTGAGTTCGACGATGAAAAAATCCTGGTGCAACATCAAA
droWil2 scf2_1100000004577:1086287-1086415 + TCTA--AATATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCA---AAAACAAAACAAAAAGCGACACGCAATTAA------TA-T---------------------AAA----ATTTCAGCATGTG--CCGCCGCAGCCGCT----------------------GCTTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:10085160-10085474 + dvi_11190 GTTCATATAATGGGTCGTAAAAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCAAATAAATCAAAT-----G---A----------AA----AT-TTTACAGTGC------TCGT---TTC-GCCTTTA---CGTGTGCGCTGCGA-----GC-------CTCGCTAAAAAAATTTGTATCTACTCACACACACACACA---------------TA----------------------------------------------------------------------TGCAT-------TTATATAATGACTAGTGTTGTTGT----------------------------GGGAGT-CGG-----------------------------------------CAACGCCGAAA-------------AAC--CTC--A-AAATATCT-TGTTCTTTCCTTAACCCATATAACTAACTAACTAACTTAGGTACTGCAATCGCGAGTTTGACGATGAGAAAATTCTCGTGCAGCACCAGA
droMoj3 scaffold_6500:2763870-2764230 + GTTGAAATAATGGGTCGTAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCAAACAAACCAAAT-----G---A----------AA---ATT-TTTGCAGTTC------TCGA---CTT-GCCTTTA---CGTGTG--C-GT---------TGGGAGCC-TCGCTACAAAATTTGTATCTACTCACGTA--CACACA---------------CATGCATACAAACATATTC--------------------------ATACATACTCATACATACCCACACTTATGCAT-------TTATATAATGGCAAATGCTGTTGTTGATT--------------------TGCGGAAGT-CGGC--------------A-AAGCA---------------------AACACA---------------AATT--CTT--GAA---AATTTTGTTCTTTCCTTAACCCATAAC--T----AACTAATTTAGGTATTGTAATCGCGAATTTGATGATGAGAAAATTCTGGTGCAGCATCAAA
droGri2 scaffold_15252:13219679-13220021 + TTCA-TAAAATGGGTCGCAAAAAGAAGAAGGCCTCAAAGCCCTGGTGCTGGTATCCTTTT-G--AAAAACAAAC-----C---AT-----ACA-AAAAAAAT-TCTGCAGCCATTGTCGCCGACTTT----ATTTTA---CGTGTG--CTA---------------------------AAATTTGTATCTGCTAACGCA--CACACA---------------CACACGCACAGAGG--------------------------------CACCCACACACA-----AAAGGCT-----GTGTGCATTTTACATAATGTCGAGTGTTGTTGTTTAAT--------------------T------GT-CGGC-----------------------------------------ATGGTTAAAAAAAAAAAAACAAGTTC--CTC--A------ACTTTGATCTTTCCTTAACCCCTAAC--T-------AACTTTAGGTACTGTAATCGTGAGTTCGATGATGAGAAAATTCTGGTGCAGCACCAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAG-----A---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCGCTC-----GCT----------------------GTATCTGCACATA----CACACA---------------CATTTATATAATGGTATTGGGTT-------------GGGGG-TAGATACACACACACG----------------AATACGCATT------------------------------------------------------------------------------------------------CTGGCTACAACGCCG---------------CATC--CTC--GTG----------AATTTTCCTTAACTCTTAACGCC----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........TGGGACGCAAGAAGAAGAAGGCCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000001110000000
..TAGGATCATGGGACGCAAGAAGAAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000010000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTAACGCC----A--AAAAC.....................................................1811.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTAACTCTTAACGCC----.............................................................2111.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTTCGATGACGAAAAGATC................2311.00100100000000000000
...............................................................................................................................................................................................................................................TGGGTT-------------GGGGG-TAGATACAC...............................................................................................................................................................................................................................................................................2011.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCGATGACGAAA.....................2811.00100000000100000000
.TTAGGATCATGGGACGCAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.........ATGGGACGCAAGAAGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
droSec2
CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAG-----A---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCGCTT-----GCT----------------------GTATCTGCACATA----CACTCG---------------CATTTATATAATGGTATTGGGTT-------------GGGGG-TAGATACACACACACG----------------TATATGCATT------------------------------------------------------------------------------------------------CTGGCTACAACGCCG---------------CATC--CTC--GTG----------AATTTTCCTTAACTCTTAACGCC----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAG-----A---TA------TAAA------TA-T---------------------TTT----TTCACTGCATGTG--CCGCTC-----GCT----------------------GTATCTGCACATA----CACACA---------------CATTTATATAATGGTATTGGGTT-------------GGGGG-TAGATACACACACACA--------------TGTATATGCATA------------------------------------------------------------------------------------------------CTGGCTACAACGCCG---------------CATC--CCC--GTG----------AATTTTCCTTAACTCTTAACGCA----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAGCACCAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCGTGAGTTCGATGACGA.......................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGTGAGTTCGATGACGA.......................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTAACTCTTAACGCA----A--..........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAAAAGATCCTTGTGCAGCA.....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCGATGACGA.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTGTGCAGCACCAGA1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATGACGAAAAGATCCTTGTGCAGC......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATGACGAAAAGATCCTTGTGC.........2512.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGATCCTTGTGCAGCA.....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAAGATCCTTGTGCA........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGATGACGAAAAGATCCTTG............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTAACTCTTAACGCA----.............................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000
.TTAGGATCATGGGACGCAAGAAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................AAGAAGAAGGCCTCCAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATGTG--CCGCTC-----GCT----------------------GTATCTGT................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCGATGA..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGTGAGTTCGATGACG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--CCC--GTG----------AATTTTCCTTAACTCT........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAAGAAGGCCTCCAAACCCTGGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTGAGTTCGATGACGAAAAGATCC...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGGACGCAAGAAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GATCATGGGACGCAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAAAGATCCTTGT...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...............................CCTCCAAACCCTGGTGCTGGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACGCAAGAAGAAGAAGGCCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCCTTAACTCTTAACGC..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TATAATGGTATTGGGTT-------------GGGG..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTTCGATGACGAAAAGAT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAAAGATCCTTGTGCAG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GTT-------------GGGGG-TAGATACACACACACA--------------TG........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............GGACGCAAGAAGAAGAAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGTGAGTTCGATGAC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGGACGCAAGAAGAAGAAGGCCTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGTACTGCAACCGTGAGTTCGA.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................GTATTGGGTT-------------GGGGG-TAG.....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...............................CCTCCAAACCCTGGTGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCTTGTGCAGCACCA..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTAGGATCATGGGACGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAAGAAGGCCTCCAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAAAGATCCTTGTGCAGCACCA..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAGGCCTCCAAACCCTGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCGTGAGTTCGATGACGAAAAGA..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCCTTGTGCAGCACCAGA2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAAGGCCTCCAAACCCTGGTGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGTGAGTTCGATGACGA.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGAAGAAGAAGGCCTCCAAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...AGGATCATGGGACGCAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCGATGAC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................GGTATTGGGTT-------------GGGGG-TAGATACA................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--GTG----------AATTTTCCTTAACTCTTAAC....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATGACGAAAAGATCCTTGTGCA........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TA-T---------------------TTT----TTCACTGCATGTG--CCGCTC-----GC...............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......ATCATGGGACGCAAGAAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGATCCTTGTGCAGCACCA..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTGAGTTCGATGACGAAAA....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................AAGAAGAAGGCCTCCAAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGTACTGCAACCGTGAGT.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTAGGATCATGGGACGCAAGAAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGGACGCAAGAAGAAGAAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACTGCAACCGTGAGTTCGATGAC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGAAAAGATCCTTGTGCA........2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCATGGGACGCAAGAAGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................TCCAAACCCTGGTGCTGGTACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAGTTCGATGACGAAAAGATCCT..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGATGACGAAAAGATCCTTGTGC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATGGTATTGGGTT-------------GGGGG-........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
CTTAGGATCATGGGACGCAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAAGAAGAAGGCCTCCAAACCCTGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGGTATTGGGTT-------------GGGGG-TA......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TACAACGCCG---------------CATC--CCC--GT...................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................TTATATAATGGTATTGGGTT-------------GGGGG-TA......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................GAAGAAGGCCTCCAAACCCTGGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........ATGGGACGCAAGAAGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTTAACTCTTAACGCA----A--AAAAC.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................GTG--CCGCTC-----GCT----------------------GTATCTGC................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAAGAAGAAGGCCTCCAAACCCTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCCTTGTGCAGCACCAGA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCGTGAGTTCGATGAC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCTCCAAACCCTGGTGCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAACCGTGAGTTCGATGACGAA......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTTCGATGACGAAAAGA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AATGGTATTGGGTT-------------GGGGG-TAGAT...................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGATGACGAAAAGAT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAAAGATCCTTGTGCAG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTACTGCAACCGTGA...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGTGAGTTCGATGACGAA......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CACTGCATGTG--CCGCTC-----GGG----------------------C.......................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----C---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCGCCC-----GCT----------------------GTATCTGCACATA----CACTCA---------------CATTTATATAATGGTATTGGGTT-------------GGGGGGGAGATACATACACACA------------------------TA------------------------------------------------------------------------------------------------TTGGCTACAACGCCG---------------CATC--CTC--GGG----------AATTTTCCTTAACTCTTAACGCT-------AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATTCTTGTGCAACACCAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGATGACGAAAAGATTCTTGTGC.........2611.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAAAGATTCTTGT...........2011.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAACCGTGAGTTCGA.............................1911.0010010000
........................................................................AC-----C---A----------A------TA-T---------------------TTT----TTCACTGCATGTG--CCG.........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..............................................................................................................................................................................................................................................TTGGGTT-------------GGGGGGGAGTA...................................................................................................................................................................................................................................................................................1880.1311000000
droYak3
CTTAGGATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----A---A----------A------TA-T---------------------TTT----TTCACTGCGTGTG--CCGCTC-----GCT----------------------GTATCTGCACATA----CACTCA---------------CATTTATATAATGGTATTGTATT-------------GGGGG-GAGATACATACACACA------------------------TA------------------------------------------------------------------------------------------------CTGGGTACAACGCCG---------------CTTC--CTC--GGG----------AATTTTCCTTAACTCTTAACGCC----A--AAAACTAGGTACTGCAACCGTGAGTTCGATGACGAAAAGATCCTTGTGCAACACCAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........ATGGGACGCAAGAAGAAGAAGGCCTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400000000004
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGATGACGAAAAGATCCTTGT...........2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTAACTCTTAACGCC----A--AA........................................................2311.00110000000000
......ATCATGGGACGCAAGAAGAAGAAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................................................................................................................................................................................................................AATGGTATTGTATT-------------GGGGG-GAGA....................................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................................................................................................ATT-------------GGGGG-GAGATACATACACACA------------------------TA------------------------------------------------------------------------------------------------CTG...........................................................................................................................................2911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAACCGTGAGTTCGATGACGAAAAG...................2911.00100000010000
droEug1
TATTAGACCATGGGACGCAAGAAGAAGAAGGCCTCAAAACCATGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----A---AC-------A-A-----CTA-T---------------------TTT----TCAACGGCATGTG--TCGTTG-----GCT----------------------GTATCTCCACATA----CACACA---------------AATTTATATAATGGTATTGGGCC-------------GGGGG------------------------------------------------------------------------------------------------------------------------------G---------------GCCACATATCCA---------------CATC--CTC-CATA----------AATTTTCCTTAACTCTTAGC--T-------AAAACTAGGTACTGCAACCGTGAATTCGACGACGAGAAGATCCTGGTCCAGCACCAGASizeHit CountTotal NormTotal
No Reads
droBia1
CTTCAAGCCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----A---AC-------A-AA----CT-TT---------------------TTT--CCTCCACGGCATGTG--CCGCTG-----GCT----------------------GTATCTCCACATACATACACACA---------------AATTTATATAATGGTGTTGGGGT-------------G-------------------------------------------------------------------------CTCCAAAAGGATAGTGAGAGGGAG------GGAGGGGA-------AGGGGGA-TAGAG-----------------------GCCA---------------CATCTCCTC-GAGA----------AATTTTCCTTGACTCTTAAC--T----GA-AAATCTAGGTACTGCAACCGAGAGTTCGACGACGAGAAGATCCTGGTGCAGCACCAGASizeHit CountTotal NormTotal
No Reads
droTak1
CTTTGAATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--CAAAACAAAC-----C---AC-------A-AA----GT-TT---------------------TTT----TCCACGACATGTG--CCGCTG-----GCT----------------------GTATCTCCACATACATACACACA---------------AATTTATGTAATGGTATTG--TT-------------GGAGG-AA-----------------------------------------------------------------------------------------G------GG-TGGGAGGTTTACAGGGG-A-AAGTGGACACA-----------------TACA---------------TATATTCC--GGAA----------AATATTCCTTAACTCCTAAC--TAAAAAAAAAAACTAGGTACTGCAACCGAGAGTTCGACGATGAGAAGATCCTGGTGCAGCACCAGASizeHit CountTotal NormTotal
No Reads
droEle1
CTTCGAATCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTTG--CAAAACAAAC-----G---AC-------A-AA----CT-TT---------------------TTT-T--CCCACGGCATGTG--CCGCTG-----GCT-------------------------TCTCCACATA----CACACA---------------AATTTATATAATGGTATTGGGCA-----------GTG--------------------------------------------------------------------------------------------------------A-TGGGA-------AGGGGAAAAAGGG-----------------------GCCA---------------CATC--TCCAGGGG----------AATTTTCCTTAACTCTTAAC--T----A--AAAACTAGGTACTGCAACCGCGAATTCGACGACGAGAAGATCCTGGTGCAGCACCAGASizeHit CountTotal NormTotal
No Reads
droRho1
CATCAAACCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTTG--CAAAACAAAC-----G---AC-------A-AA-----TATT---------------------TTT----TTCACGGCATGTG--CCGCTT-----GCT----------------------GTGTCTCCACATA----CACACA---------------AATTTATATAATGGTATTGGGCA-----------GTGGGGG-GGGAT------------------------------------------------------------------------------------------------------------------------------------------------GCCA---------------CATC--TCCGGGGG----------AATTTTCCTTAACTCTTAAC--T----G--AAAACTAGGTACTGCAACCGCGAATTCGACGACGAGAAGATCCTGGTACAGCACCAGASizeHit CountTotal NormTotal
No Reads
droFic1
CTTCGCATAATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCG--AAAAACTATC-----A---AC-------A-AA----GT-TC-A-------------------TTT----TCCACGGCATGTG--CCGCTG-----GCT----------------------GTATCTCCACATA----CACACA---------------AATTTATATAATTGTGTTGGTTTGGTTGTGTATAGTAGGGG------------------------------------------------------------------------------------------------------------------------------G-----------------------TCCA---------------CATC--TTC--A-A---AAT----TTTTTTCCTTAACTCTTAAC--T----A--AAAACTAGGTACTGCAACCGAGAGTTCGATGATGAGAAAATTCTGGTACAGCACCAGASizeHit CountTotal NormTotal
No Reads
droKik1
CTTGGAGCCATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCA--AAAAACAAAC-----T---GC-------A-AA----AC-TGCG-------------------TTG----TCCACGGCATGTGCGCCGCTG-----GCTGGGAGGGCGAGTGAAAAAATTTGTATCTACACATA----CACGCT---------------CATTTATATAATGGTATTGT--G-------------GG------------------------------------------------------------------CAGGGGCTC--------------------TGGGGC----------------------AGAGGGG-----------------------TCCA---------------CA----------------GATTGGCATTTTCCTTAACTCCCAGC--G----AA-AAATCTAGGTACTGCAACCGCGAGTTCGACGACGAGAAGATCCTGGTGCAGCACCAGASizeHit CountTotal NormTotal
No Reads
droAna3
CTTGAAGCTATGGGACGCAAGAAGAAGAAGGCCTCAAAGCCCTGGTGCTGGTATCCTTTTCA---AAAACAATG-----A---GC-------A-AA----GT-TT---------------------TTTTTCCCTCACGGCATGTG--CCGCTG-----CCTGGGAGGC-AAACGAGAAAATTTGTATCTACACATA----CACCCA---------------AATTTATATAATGGGAAT----C-------------GGGGG-G----------------------------------------------------------------------------------------------GC----------------------AAAATA-----TATACATTT--------------------------------------------GTGTCTTGGCATTTTCCTTAACTCCCTA---------------CTAGGTACTGCAACCGTGAGTTCGACGATGAGAAGATCCTTGTGCAGCACCAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................GGCCTCAAAGCCCTGGTGCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTAACTCCCTA---------------CTAG..................................................2011.001010000
............................AGGCCTCAAAGCCCTGGTGCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGAAGATCCTTGTGCAGCACCAGA2811.001001000
droBip1
CTTGAAGCTATGGGACGCAAGAAGAAGAAGGCCTCAAAACCCTGGTGCTGGTATCCTTTTCA---AAAACAAAT-----C---GC-------A-AA----GT-TT---------------------TTT-TCCCTCACGGCATGTG--CCGCTG-----CCTGGGAGGC-AAACGAGAAAATTTGTATCTACACATA----CACATA---------------TATTTATATAATGGGAA----AC-------------GGGGG------------------------------------------------------------------------------------------------GT----------------------AAAAGG-----TACATATTT------------------------------------C--G----GTGTCTTGGCATTTTCCTTAACTCCTTA---------------CTAGGTACTGCAACCGTGAGTTTGACGATGAGAAGATCCTTGTGCAGCACCAGASizeHit CountTotal NormTotal
No Reads
dp5
TTTCAAATCATGGGTCGCAAAAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTT---TAAAACAAAC-----A---AC-------A-A------TA-T---------------------TT-----TTCCCAGCATGTG--CCGCTA-----GCTGGTAGG----GCAAAAAAATTTGTATGTACACATA----CAAAC-CACTCACACAGGAGAAATTTATATAATGGTGTTGGCAA-------------GGGGG-------------------------------------------------------------------------------------------------C----AGG-----------------------------------------------------AAGAA---CG-----------G----ATATTTTGGCATTTTCCTTAACTCATT----T-------AAAAC-AGGTACTGCAACCGTGAGTTCGACGATGAAAAAATCCTGGTGCAACATCAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCGTGAGTTCGACGATGAAAAA...................2712.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGTGAGTTCGACGATGA.......................2211.0010100000000
TTTCAAATCATGGGTCGCAAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTAACTCATT----T-------AAAAC-AG..................................................2411.0010010000000
.TTCAAATCATGGGTCGCAAAAAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
droPer2
TTTCAAATCATGGGTCGCAAAAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTT---TAAAACAAAC-----A---AC-------A-A------TA-T---------------------TT-----TTCCCAGCATGTG--CCGCTA-----GCTGGTAGG----GCAAAAAAATTTGTATGTACACATA----CAAAC-CACTCACACAGGAGAAATTTATATAATGGTGTTGGCAA-------------GGGGG-------------------------------------------------------------------------------------------------C----AGG-----------------------------------------------------AAGAA---CG-----------G----ATATTTTGGCATTTTCCTTAACTCATT----T-------AAAAC-AGGTACTGCAACCGTGAGTTCGACGATGAAAAAATCCTGGTGCAACATCAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGACGATGAAAAAATCCT..............2111.001100000
droWil2
TCTA--AATATGGGACGCAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCA---AAAACAAAACAAAAAGCGACACGCAATTAA------TA-T---------------------AAA----ATTTCAGCATGTG--CCGCCGCAGCCGCT----------------------GCTTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......AATATGGGACGCAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
..........................GAAGGCCTCCAAACCCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..............................GCCTCCAAACCCTGGTGCTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.........ATGGGACGCAAGAAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
GTTCATATAATGGGTCGTAAAAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCAAATAAATCAAAT-----G---A----------AA----AT-TTTACAGTGC------TCGT---TTC-GCCTTTA---CGTGTGCGCTGCGA-----GC-------CTCGCTAAAAAAATTTGTATCTACTCACACACACACACA---------------TA----------------------------------------------------------------------TGCAT-------TTATATAATGACTAGTGTTGTTGT----------------------------GGGAGT-CGG-----------------------------------------CAACGCCGAAA-------------AAC--CTC--A-AAATATCT-TGTTCTTTCCTTAACCCATATAACTAACTAACTAACTTAGGTACTGCAATCGCGAGTTTGACGATGAGAAAATTCTCGTGCAGCACCAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGACGATGAGAAAATTCT..............2112.002000000000000020000000000000000000000000000000000000000000000000
..................................CCAAACCCTGGTGCTGGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................TTTACAGTGC------TCGT---TTC-GCCTTTA---CG..................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000001000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACTGCAATCGCGAGTTTGACG...........................2411.001000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................A---CGTGTGCGCTGCGA-----GC-------CTCG....................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
.......TAATGGGTCGTAAAAAGAAGAAGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GACTAGTGTTGTTGT----------------------------GGGAGT-...................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAATCGCGAGTTTGACGATGAGAAA...................2711.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................A---CGTGTGCGCTGCGA-----GC-------CT......................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTGACGATGAGAAA...................1811.001000000001000000000000000000000000000000000000000000000000000000
droMoj3
GTTGAAATAATGGGTCGTAAGAAGAAGAAGGCCTCCAAACCCTGGTGCTGGTATCCTTTTCAAACAAACCAAAT-----G---A----------AA---ATT-TTTGCAGTTC------TCGA---CTT-GCCTTTA---CGTGTG--C-GT---------TGGGAGCC-TCGCTACAAAATTTGTATCTACTCACGTA--CACACA---------------CATGCATACAAACATATTC--------------------------ATACATACTCATACATACCCACACTTATGCAT-------TTATATAATGGCAAATGCTGTTGTTGATT--------------------TGCGGAAGT-CGGC--------------A-AAGCA---------------------AACACA---------------AATT--CTT--GAA---AATTTTGTTCTTTCCTTAACCCATAAC--T----AACTAATTTAGGTATTGTAATCGCGAATTTGATGATGAGAAAATTCTGGTGCAGCATCAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTAACCCATAAC--T----AACTAATTTAC..................................................2911.001000010
.......................GAAGAAGGCCTCCAAACCCTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................GCAGTTC------TCGA---CTT-GCCTTTA---C...................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTTAACCCATAAC--T----AACTAATTTAG..................................................2811.001000010
................................................................................................................................................................................................................................................C--------------------------ATACATACTCATACATACCCA................................................................................................................................................................................................................................................................2211.001100000
.................................TCCAAACCCTGGTGCTGGTATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAATCGCGAATTTGATGATGAGA.....................2611.001000001
droGri2
TTCA-TAAAATGGGTCGCAAAAAGAAGAAGGCCTCAAAGCCCTGGTGCTGGTATCCTTTT-G--AAAAACAAAC-----C---AT-----ACA-AAAAAAAT-TCTGCAGCCATTGTCGCCGACTTT----ATTTTA---CGTGTG--CTA---------------------------AAATTTGTATCTGCTAACGCA--CACACA---------------CACACGCACAGAGG--------------------------------CACCCACACACA-----AAAGGCT-----GTGTGCATTTTACATAATGTCGAGTGTTGTTGTTTAAT--------------------T------GT-CGGC-----------------------------------------ATGGTTAAAAAAAAAAAAACAAGTTC--CTC--A------ACTTTGATCTTTCCTTAACCCCTAAC--T-------AACTTTAGGTACTGTAATCGTGAGTTCGATGATGAGAAAATTCTGGTGCAGCACCAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................CAAAGCCCTGGTGCTGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTTCGATGATGAGAA....................1911.00101
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTTCGATGATGAGAAAATTCTG.............2611.00110

Generated: 05/19/2015 at 11:30 AM