ID:

dsi_19755

 Coordinate:

3r:12887832-12887981 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.9 -24.7 -24.7

Flybase annnotation

exon [3r_12887982_12888501_+]; CDS [3r_12887982_12888501_+]; intron [3r_12887201_12887981_+]; Antisense to intron [3r_12884089_12895937_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTACATGTATATGATTTATTTATAGACCAATACTATAAATTTATAGTTTTTTGAAAAAGGAATCGAGATGGGTTAACTGAAAATTCGTTAGCCATCCATAAACACTAATTTCTGTTATCATTTTCTAAGCTTGTTGATTTATCAGTGTGTGACTCACAGAAAGCTTATCGGTTATTAACATTACTTATTTTTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTTTTATGGTCCGCGACC
**************************************************.(((((((((((..(((...(((((((.((....)))))))))...................(((((........(((((((..(((.((((......)))).)))....)))))))........)))))...)))..))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR902008
ovaries
 GSM343915
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
.......................................................................................................................................................................................................AATTTTTTGGTATCTTCGAGC.............................. 21 1 1 4.00 4 2 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................AATTTTTTGGTATCTTCGAGCAGC........................... 24 1 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGCGACAAC..................... 26 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................TTTGGTATCTTCGAGCAGCGACAACCAC.................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGGTATCTTCGAGCAGCGACAACCAC.................. 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGC........................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGC.............................. 20 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTGGTATCTTCGAGCAGC........................... 18 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................................................................AATTTTTTGGTATCTTCGAGCAGCGAC........................ 27 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAATTTTTTGGTATCTTCGAGCAGC........................... 25 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
...........................................TAGTTTTGTGAAAAAGGAGTGG......................................................................................................................................................................................... 22 3 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0
.........................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGCGA......................... 24 0 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0
...................TTACAGACCAATACTAGAA.................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGCGAC........................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAAATTTTTTGGTATCTTCGAGCAGCG.......................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................AATCGAGATGGGTTAACTGAAA........................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................AAATTTTTTGGTATCTTCGAGC.............................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTTTGGAATCTTCGAGCAGC........................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTAGGTATCTTCGAGCAGCGACAACCAC.................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................TTTGAAAAAGGAATCGAGATGGGTT................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGCGACAAC..................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTGATCATTTTTTAAGCTTGT.................................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTGGTATCTTCGAGCAGCGAC........................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................TGTGATCATTTTGTATGCTTGTT................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGCGAC........................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAATTTTTTGGTATCTTCGAG............................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................TTTGGTATCTTCGAGCAGCGACAAC..................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................TGAGATCATTTTGTAAGCTTGTT................................................................................................................... 23 3 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGC........................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCGAGCAGCGACAACCAATCTTT............. 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTATCTTCGAGCAGCGACA....................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................TTGGTATCTTCGAGCAGCGACAACCAC.................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................TGAGATCATTTTGTAAGCTTGT.................................................................................................................... 22 3 6 0.67 4 0 0 0 4 0 0 0 0 0 0 0
..........................................................................................................................TACTAAGCTTCTTCATTTATCA.......................................................................................................... 22 3 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................TGTGATCATTTTCAAAGCTGGTT................................................................................................................... 23 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.........TATGATTTAGTTATTGACC.............................................................................................................................................................................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATTTAACACTGTGTGACT................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................TGAGATCATTTTCTAAGCT....................................................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................TGTGATCATTTTGTAAGCTGGT.................................................................................................................... 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................GCTTGTTGATTTGTTAGTGTT..................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0
.................................................................ATATCGGTTAACTGAAAA....................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................TAACATTAGTGTTTTTTTTTTTTA................................................... 24 3 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

CATGTACATATACTAAATAAATATCTGGTTATGATATTTAAATATCAAAAAACTTTTTCCTTAGCTCTACCCAATTGACTTTTAAGCAATCGGTAGGTATTTGTGATTAAAGACAATAGTAAAAGATTCGAACAACTAAATAGTCACACACTGAGTGTCTTTCGAATAGCCAATAATTGTAATGAATAAAAAAAAAAATCTAAAAAACCATAGAAGCTCGTCGCTGTTGGTGAAAAATACCAGGCGCTGG
**************************************************.(((((((((((..(((...(((((((.((....)))))))))...................(((((........(((((((..(((.((((......)))).)))....)))))))........)))))...)))..))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
.............................................................................................................................................................................................AAAAAAAAATCTAAAAAAC.......................................... 19 0 2 1.00 2 2 0 0 0 0
...............................................................................................................................................................................................................CCATAGAAGCTGGTC............................ 15 1 6 0.17 1 0 0 1 0 0
.............................................................................................................................................................................................AAAAAAAAATCTGGAAGACCAT....................................... 22 3 6 0.17 1 0 1 0 0 0
.............................................................................................................................................................................................................................CACTGTTGGTGAAAATGACC......... 20 3 11 0.09 1 0 0 0 1 0
...................................................................................AAGCGATGGGGAGGTATTT.................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:12887782-12888031 + dsi_19755 GTACATGTATAT-GAT--------------TTATTTATAGACCAATACT-----------------------AT---------AAATTTATAGTTTTTTGA-AAAAGGAATCGAGA-----TGGGTT-AACTGAAAATTCGT-------------------------------------TAGCCATCCATAAA-CACT-A------------------------AT-TTCTGTTATCATTTTCTAAGCTTGT---------------------------------------TGATTTATCAGT---------------------------------------GTGTGACTCACAG-AAA--------GCTTATCGGTTATTAACAT-----------TACT---TATT----TTTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTTTTATGGTCCGCGACC
droSec2 scaffold_5855:704-963 + GTACATTTATAC-A---------AGTATATTTTTTTATAGACCAATACGAGCAATAAG---------------T---------AAATTTATAGTTTTTTTA-AAAAGGAATCGAGA-----TAGGTT-AATTGAAAATTCGT-------------------------------------TAGCCATCCATAAA-CACT-A------------------------AT-TTCTGTTATCGTTTTCTAAACTTGT---------------------------------------TGATTTATCAGT---------------------------------------GTGTGACTCACAG-AAA--------GCTTATCGGTTATTAACAT-----------TACT---TA-------TTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTTTTATGGTGCGCGACC
dm3 chr3R:8230562-8230863 - GTACAT----AT-GAT--------------TTATTTATAGACCAATACGAGAAATCCGCTTT----------AT---------AAATTTATAGTTT--TCCAAAAAGAAATCGAGA-----TGGGTT-AATTGAAAATTCGTCGGATAGGTAATGAA---CAACG------------C-TAGCCATGCATAAA-CTCG-A------------------------AT-TTCTGTTATCGTTTTCTAAACTTGTTGAG--CGCA----CGATTAATAATTT------CTGATTTGATTTATCAGT---------------------------------------GTGTGACTCACAA-AAA--------GCTTATCGGTCATTAACAT-----------TAT---------T--ATTTTTTTTAGATTTTTTGGTATCTTTGAGCAGCGACAACCACTTTTAATGGTGCGCGACC
droEre2 scaffold_4770:13392663-13392973 + GTACAT----AT-AAT--------------TTTTTTATAGCCAAACTCGATAATCCCCCACT----------AT---------ACAATTATAGTTTGTTCATAAATTAAATAGAGA-----TGGGTT-AATTAAAAATTCGTCGGATAGGTAATGAA---CGAGG------------C-TAGCCATCCATAAAAAAAT-A------------------------AT-TCATGTTATCATTTTCTTATCTTGTGGAG--CGCT----CAAATAAA----ATTTTTTTTGATTTGATTTAATAGT---------------------------------------AAGTGACTCACAG-AGA--------GCTTATCGGTTATTAACAT-----------GACT---TTTA----TTTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTCTTATGGTGCGCGACC
droYak3 3R:12550034-12550326 - ATCTAATTAT-TAATT--------------TATTTC--ATATCAGTGCAAGCAA---------------------------------TTACAGTCTTTTCAAAAAAGAAATAGAGA-----TGGGTT-AATTAAAAATTCGTCGGATAGGTAATGAA---CAACG------------C-TAGCGATCCAAAAAACACT-T------------------------GT-TCATGTTATCATTTTCTAATCTTG---AG--CGCA----CGAATATA----AATT-TTGTGATTGGTTTTATCAGT---------------------------------------ATGTGACTTACGG-AAA--------GCTTATCGATTATTAACAT-----------TATT-------AT--TATTTTTCTAGATTTTTTGGTATCTTCGAGCAGCGCCAACCCCTTTTTATGGTGCGCGACC
droEug1 scf7180000409615:475716-475980 - TTGCAT----GG-CAA--------TTGT--TTATTTT-----------------------------------------------------GGCACT--GCCAAAAACAAACAAAGA--------------TTAACAATTAGTCGGATAGGTAATGAA---CACAT------------CTTACTCAGCCATAAATCACT-T------------------------AT-TTCACTTATCGTTTTCTAATCTTTTTATA--TGCA----CGAATAAT----T------CTATTTTGATTTATCAAT---------------------------------------AAATGACTCATAT-AAT--------GCTTATCGGACATTAACTG-----------TAAC---T---CT--TTTTTTTGTAGATATTTTGGTATCTTCGAGCAGCGGCAGCCACTACTTATGGTTCGCGACC
droBia1 scf7180000302155:78016-78197 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCGTCCATAAAACACC-A------------------------AA-ATATGTTATCTCTCTGTAATCTTTTTAAA-TCGC------AAATAAT----A-------CCTTTTCACCTATCTGC---------------------------------------AAATGAGTCACAA-AAG--------ACTTATCGGACATTAAACT-----------TGAT---TA------TTTTATTTTAGATTTTTCGGTATCTTCGAGCAGCGACAGCCATTGTTGATGGTACGCGACC
droTak1 scf7180000415366:311660-311961 + TTACAT----GA-AATTAATCACT------AATCTC---GACTAA-ACAAGT--------------------------------AATTTATGGTACCGTCA-AGTACAAACAGAGATTAGCTTGGTTAATTTAAAATAGGTAAGGATAGGTAATGAA---CAATA------------TATACCCATCCATAAAACACC-A------------------------AT-TTGTGTTATCGTTTTCTAATCTGTTTTTA-TTGCACCTAAGAATAAA----T---------ATTTAATTTATCAGC---------------------------------------AAATGAGTCACAA-AAG--------GCTTATCGTTCATTAACAT-----------TGAT---TA------TTTTATTTTAGATTTTTCGGTATCTTTGAGCAGCGACAACCTCTACTGATGGTACGCGATC
droEle1 scf7180000490731:39599-39726 + AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT---------------------------------------TTTGATGTATCAGT---------------------------------------AAATGAGTCACAA-AAT--------GCTTATCGGCCATTAACAT-----------TGATTTCTATTTT--CTGTTTTTTAGATTTTTCGGTATCTTTGAGCAGCGACAACCGCTATTGATGGTACGCGACC
droRho1 scf7180000779237:9666-9830 - TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-TTGTGTTATCTTTCTCTAATCTTTTTTAA--TGCA-------AAAAT----T------CTTTCTAGATTTATAATT---------------------------------------CACTGACTCACTA-AAT--------GCTTATCGGTCATTAACAT-----------ATAT---TTCA----TTTATTTTTAGATTTTTTGGTATCTTTGAGCAGCGACAACCACTATTGATGGTACGCGACC
droFic1 scf7180000453812:856269-856483 + ACCAAT----CA-ATTTTATCCCATC-------------------------------------------------------------------------------------------------------------------------ATATTAA-------------------------TACCCATCCATAAA-CTCATAAATAAA------------------AT------------TATTCAAATCTTTTTCAA--AGCA----CCAGGAAGCCTTT------C-----TGGTTTTTTAC----------------------------------------CCATGACTCACCAAAGT--------GCTTATCGGACATTAACAT-----------TAAGACTTGTTTTTTGTTTTGTTTAGATTTTTTGGTATCTTCGAGCAGCGGCAACCACTTTTTATGATTCGCGACC
droKik1 scf7180000302475:290447-290566 - CTTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCGTATCAT----------------------------------------TAGTGAGTCACAA-AAT--------GCTTATCGGACATTGATTT-----------TGTT---TTTT----TAATTTTTTAGATTTTTCGGTATCTTTGAACAGCGACAACCACTCATAATGGTACGCGATC
droAna3 scaffold_13340:7608485-7608733 - TATCCC----CC-AATTAGACA-A--------------------------------------AA--AAAAATATACGACAAAAGTTT-------TTGTA------------GTTTG-----AGAGCT-AAGAAAAAACCCATTGGCTAGGTTATGAT---TATTTTTCGGTGTCTTA-----------------------AAAGAA-ACTATACGAATATATTT------------------------TTTTTTGAAACGC------A--------------------------------ACGCAACTTTCTTAATTATTAAAA-----------------------------------------------TACAGTCATTACTAC-----------CAACAC-T---AT--TTTCGTTGTAGGATTTATGGTATCTTCGAGCAGCGGCAGCCACTTTTCATGATTAAAGACC
droBip1 scf7180000396708:1236373-1236622 + ATATATATAGGC-A---------A--------------------------------------AATAAAAAATATAAGATAAGAGCTA-------TTA-A------------GCTTG-----AGAGCT-AAGAAAGAAATTATTGGCTAGGTTATGGTGTTTATTTTTAGGTGTTTTT-----------------------AATGT---------------TTTT-------------TAAA-TCGACCTTTTTAAA--ACCT----TAAGTGTT----T------C-----------------------TAT--------------------------------AAAATCCATTA-ACT--------ATTCTATAGATACTATCAT-----------TAAA---TCCA-T--TTTTATTGTAGGGTTTTTGGAATCTTCGAGCAACGGCAACCCCTATTAATGGTTCGAGACC
dp5 2:5453039-5453324 - GTAAAAGAATAA-ATT--------------TTACCCATAGAACAAT------------------------------------------T-GGGTCTGAA------------CGTGG-----AGGTTA-AGCTAAAAAAGAATCGGATAGGTTAAGAC---CAGACTACGACCATATA-----------------------AAGGCATACAAGATAGAAATATTGATGGACGGTTATCAAATTCTAATCTTTTTAA------------------TTAATT------CTAATC-----TGCAACCCGAATCTGC--------------------AATTATCAGTA-----------A-AAT--------GATTAGCAGTCAATAACAT-----------TGTG---TACTTT--ATTTTACACAGAGTTTATGGTATCTTCGAGCAGCGCCAACCACTGATGATGATCCGCGACC
droPer2 scaffold_19:1169276-1169565 - GTATATATATAT-AAA--------------TT----------------------------------------------------------GGGTCTGAA------------CGTGG-----AGGCTA-AGCTAAAAAAGAATCGGATAGGTTAAGAC---CAGACTACGACCATATA-----------------------AAGGCATACAAGATAGAAATATTGATGGACGGTTATCAAATTCTAATCTTTTTAA------------------TTAATT------CTAATC-----TGCAACCCGACG-ACTCATTTGACAAATTAGAGTCAAATTATCAGTA-----------A-AAT--------GATTAGCAGTCAATAACAT-----------TGTG---TACTTT--ATTTTACACAGAGTTTATGGTATCTTCGAGCAGCGCCAACCACTGATGATGATCCGCGACC
droWil2 scf2_1100000004902:5368092-5368158 - TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT--TTTAATTTCAGGGTCTATGGTATCTTTGAGCAGCGACAGCCACTGTTAATGTTGCGCGATC
droVir3 scaffold_12822:3338554-3338736 + ATAAAT----GC-TAA-----------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TTAAGTTATTTTTTAGTATAACTGTTTAA--CGGT----CGA------------------------GATAAGT-TT---------------------------------------TGATGACTCACAA-ATGTTGGACACTCTTATCGGTCAATGTCACCCAAAATGGAATGAA---TACTTT--TTGTTTTATAGGGTATTTGGCATCTTTGAGCAGCGCAAGCCGCTGCTGATGATACGCGATC
droMoj3 scaffold_6540:16659291-16659358 + ATTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TCTATTTATAGGGTTTTTGGAATATTTGAGCAGCGCAAGCCGCTGTTGATGATACGCGACC
droGri2 scaffold_14906:980902-980984 + G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCGGTCAA---CAT-----------TTTG-------TT--TATACTTCTAGGGTTTTCGGCATTTTTGAGCAACGCAACCCATTGCTGATGATACGTGATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTACATGTATAT-GAT--------------TTATTTATAGACCAATACT-----------------------AT---------AAATTTATAGTTTTTTGA-AAAAGGAATCGAGA-----TGGGTT-AACTGAAAATTCGT-------------------------------------TAGCCATCCATAAA-CACT-A------------------------AT-TTCTGTTATCATTTTCTAAGCTTGT---------------------------------------TGATTTATCAGT---------------------------------------GTGTGACTCACAG-AAA--------GCTTATCGGTTATTAACAT-----------TACT---TATT----TTTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTTTTATGGTCCGCGACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGCGACAAC.....................2612.00201000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTCGAGCAGCGACAACCAC..................2812.00200000000000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATCTTCGAGCAGCGACAACCAC..................2612.00200000000000020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGC...........................2312.00202000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGC..............................2012.00201000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCTTCGAGCAGC...........................1812.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGCGA.........................2412.00200000011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGCGAC........................2411.00100100000000000000
............................................................................................................AATCGAGA-----TGGGTT-AACTGAAA.................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
................................................................................................TTTGA-AAAAGGAATCGAGA-----TGGGTT-.........................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGCGACAAC.....................2711.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGC...........................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCTTCGAGCAGCGAC........................2111.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGCGAC........................2511.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTCGAGCAGCGACAAC.....................2511.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGC...........................2011.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTTCGAGCAGCGACA.......................1911.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCTTCGAGCAGCGACAACCAC..................2711.00100000000000001000
droSec2
GTACATTTATAC-A---------AGTATATTTTTTTATAGACCAATACGAGCAATAAG---------------T---------AAATTTATAGTTTTTTTA-AAAAGGAATCGAGA-----TAGGTT-AATTGAAAATTCGT-------------------------------------TAGCCATCCATAAA-CACT-A------------------------AT-TTCTGTTATCGTTTTCTAAACTTGT---------------------------------------TGATTTATCAGT---------------------------------------GTGTGACTCACAG-AAA--------GCTTATCGGTTATTAACAT-----------TACT---TA-------TTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTTTTATGGTGCGCGACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGC...........................2335.33163940
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGC..............................2031.3341201
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTCGAGCAGC...........................1931.0030210
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGC...........................2131.0030120
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGCGACAAC.....................2930.6720200
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCA.............................2130.6720020
.......................................................................................................................................................................................................................................................CTTGT---------------------------------------TGATTTATCAGT---------------------------------------G..................................................................................................................................1820.5010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGC...........................2230.3310100
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGC..............................1930.3310010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCGAGCAGCGACAACCA...................2130.3310010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAG............................2230.3310100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGCGACAACCACTTTTT.............2230.3310100
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCTTCGAGCAGCGA.........................2030.3310100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTCGAGCAGCGACA.......................2330.3310100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGCGA.........................2530.3310100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCGAGCAGCGACAACC....................2030.3310100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGCGACAAC.....................2630.3310100
dm3
GTACAT----AT-GAT--------------TTATTTATAGACCAATACGAGAAATCCGCTTT----------AT---------AAATTTATAGTTT--TCCAAAAAGAAATCGAGA-----TGGGTT-AATTGAAAATTCGTCGGATAGGTAATGAA---CAACG------------C-TAGCCATGCATAAA-CTCG-A------------------------AT-TTCTGTTATCGTTTTCTAAACTTGTTGAG--CGCA----CGATTAATAATTT------CTGATTTGATTTATCAGT---------------------------------------GTGTGACTCACAA-AAA--------GCTTATCGGTCATTAACAT-----------TAT---------T--ATTTTTTTTAGATTTTTTGGTATCTTTGAGCAGCGACAACCACTTTTAATGGTGCGCGACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTTGAGCAGC...........................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000001000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTTGAGCAGC...........................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000002000000000000
.............................................................................................................................................................................................................................................GTTTTCTAAACTTGTTGAG--C......................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCTTTGAGCAGC...........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTCATTAACAT-----------TAT---------T--ATTTTTTTTA...................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTTGAGCAGCGACAA......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTTGAGCAGCGACA.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTGAGCAGCGACAAC.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTTGAGCAGC...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTTGAGCAGCGACAAC.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTTGAGCAGCGACAACC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTAATGGTGCGCGAC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TGAAAATTCGTCGGATAGGTAATGAA---C........................................................................................................................................................................................................................................................................................................................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTTGAGCAGCGACAACCAC..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATAATTT------CTGATTTGATTTATCAGT---------------------------------------GTGG...............................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAGCGACAACCACT.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATCTTTGAGCAGCGACA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAGCAGCGACAACCA...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GTCATTAACAT-----------TAT---------T--ATTTTTTTTAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTTGAGC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CTTGTTGAG--CGCA----CGATT..........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AA-CTCG-A------------------------AT-TTCTGTTATCG...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATCGTTTTCTAAACTTGTTGAG--CG.....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTTGAGCAGCGAC........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATTTGATTTATCAGT---------------------------------------GT.................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTTGAGCAGCGAC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTTGAGCAGCGACAACCACT.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TAGCCATGCATAAA-CTCG-A------------------------AT-TTCTGT................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTTGAGCAGCGACA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAGCAGCGACAACCACT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTTGAGCAGCGACAACC....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTGAGCAGCGACAACCAC..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTTGAGCAG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTTGAGCAGC...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTTGAGCAGC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTTGAGCAGCGACA.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAGCAGCGACAACCAC..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATCTTTGAGCAGCGACAA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTTGAGC..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTTTAATGGTGCGCGAC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................AAAATTCGTCGGATAGGTAATGAA---CAAC.....................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AAAAGAAATCGAGA-----TGGGTT-AATTG....................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................TT-AATTGAAAATTCGTCGGATAGGTAAT...............................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................ATAGGTAATGAA---CAACG------------C-......................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................AAATTCGTCGGATAGGTA.................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................................AAAAGAAATCGAGA-----TGGGTT-A........................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................................................ACAA-AAA--------GCTTATCGGTC...............................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................T---------------------------------------GTGTGACTCACAA-AAA--------GCTTATCGG.................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................AAGAAATCGAGA-----TGGGTT-AATTG....................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................AATCGAGA-----TGGGTT-AATTGAAAAT...............................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................TGGGTT-AATTGAAAATTCC............................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................TAGGTAATGAA---CAACG------------C-GGT...................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGATTTTTTGGTAT......................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTACAT----AT-AAT--------------TTTTTTATAGCCAAACTCGATAATCCCCCACT----------AT---------ACAATTATAGTTTGTTCATAAATTAAATAGAGA-----TGGGTT-AATTAAAAATTCGTCGGATAGGTAATGAA---CGAGG------------C-TAGCCATCCATAAAAAAAT-A------------------------AT-TCATGTTATCATTTTCTTATCTTGTGGAG--CGCT----CAAATAAA----ATTTTTTTTGATTTGATTTAATAGT---------------------------------------AAGTGACTCACAG-AGA--------GCTTATCGGTTATTAACAT-----------GACT---TTTA----TTTTTTTTTAGATTTTTTGGTATCTTCGAGCAGCGACAACCACTTCTTATGGTGCGCGACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCACTTCTTATGGTGCGC....2313.0031000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGC...........................2113.0031000110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCTTCGAGCAGC...........................1913.0030000210
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGC...........................2312.0020000110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCGAGCAGCGACAAC.....................1912.0020000200
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGCGACAACCACTTCTTATGGT........2711.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACAACCACTTCTTATGC.........2111.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACCACTTCTTATGGTGCGC....2411.0010000010
.......................................................................................................................................AATTCGTCGGATAGGTAATGAA---CGA......................................................................................................................................................................................................................................................................................................................2511.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGC..............................2011.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAG............................2111.0011000000
.................................................................................................................................................................................................................................................................................................TTTGATTTAATAGT---------------------------------------AAGTGA.............................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGC...........................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGC..............................1911.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTCGAGCAGCGACAACCACTT................2511.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGCGA.........................2311.0011000000
............................................................................................................AATAGAGA-----TGGGTT-AATTAAAA.................................................................................................................................................................................................................................................................................................................................................2211.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGCGACAAC.....................2811.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAGCGACAACCACTTCTTATGGT........2811.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGC...........................2211.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGCGACAACCACTTCTTATGGC........2711.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTCGAGCAGCGACAAC.....................2011.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAGCGACAACCACTTCT..............2211.0010000010
droYak3
ATCTAATTAT-TAATT--------------TATTTC--ATATCAGTGCAAGCAA---------------------------------TTACAGTCTTTTCAAAAAAGAAATAGAGA-----TGGGTT-AATTAAAAATTCGTCGGATAGGTAATGAA---CAACG------------C-TAGCGATCCAAAAAACACT-T------------------------GT-TCATGTTATCATTTTCTAATCTTG---AG--CGCA----CGAATATA----AATT-TTGTGATTGGTTTTATCAGT---------------------------------------ATGTGACTTACGG-AAA--------GCTTATCGATTATTAACAT-----------TATT-------AT--TATTTTTCTAGATTTTTTGGTATCTTCGAGCAGCGCCAACCCCTTTTTATGGTGCGCGACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGC..............................2012.00220000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGCGC.........................2412.00200100010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGGTATCTTCGAGCAGC...........................2211.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCGAGCAGCGCCAA......................1811.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAG............................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATCTTCGAGCAGC...........................2011.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAACCCCTTTTTATGGTGCGA....2411.00101000000000
..................................................................................................................................TTAAAAATTCGTCGGATAGGT..................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCTTCGAGCAGCGCCAACCC...................2411.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTTTTATGGTGCGCGACC2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGTATCTTCGAGCAGC...........................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAACCCCTTTTTATGGTGCGC....2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGCAGCGCCAACCCCTT................2111.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTATGGTGCGCGACC1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTGGTATCTTCGAGCAGC...........................2311.00100000010000
droEug1
TTGCAT----GG-CAA--------TTGT--TTATTTT-----------------------------------------------------GGCACT--GCCAAAAACAAACAAAGA--------------TTAACAATTAGTCGGATAGGTAATGAA---CACAT------------CTTACTCAGCCATAAATCACT-T------------------------AT-TTCACTTATCGTTTTCTAATCTTTTTATA--TGCA----CGAATAAT----T------CTATTTTGATTTATCAAT---------------------------------------AAATGACTCATAT-AAT--------GCTTATCGGACATTAACTG-----------TAAC---T---CT--TTTTTTTGTAGATATTTTGGTATCTTCGAGCAGCGGCAGCCACTACTTATGGTTCGCGACCSizeHit CountTotal NormTotal
No Reads
droBia1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCGTCCATAAAACACC-A------------------------AA-ATATGTTATCTCTCTGTAATCTTTTTAAA-TCGC------AAATAAT----A-------CCTTTTCACCTATCTGC---------------------------------------AAATGAGTCACAA-AAG--------ACTTATCGGACATTAAACT-----------TGAT---TA------TTTTATTTTAGATTTTTCGGTATCTTCGAGCAGCGACAGCCATTGTTGATGGTACGCGACCSizeHit CountTotal NormTotal
No Reads
droTak1
TTACAT----GA-AATTAATCACT------AATCTC---GACTAA-ACAAGT--------------------------------AATTTATGGTACCGTCA-AGTACAAACAGAGATTAGCTTGGTTAATTTAAAATAGGTAAGGATAGGTAATGAA---CAATA------------TATACCCATCCATAAAACACC-A------------------------AT-TTGTGTTATCGTTTTCTAATCTGTTTTTA-TTGCACCTAAGAATAAA----T---------ATTTAATTTATCAGC---------------------------------------AAATGAGTCACAA-AAG--------GCTTATCGTTCATTAACAT-----------TGAT---TA------TTTTATTTTAGATTTTTCGGTATCTTTGAGCAGCGACAACCTCTACTGATGGTACGCGATCSizeHit CountTotal NormTotal
No Reads
droEle1
AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT---------------------------------------TTTGATGTATCAGT---------------------------------------AAATGAGTCACAA-AAT--------GCTTATCGGCCATTAACAT-----------TGATTTCTATTTT--CTGTTTTTTAGATTTTTCGGTATCTTTGAGCAGCGACAACCGCTATTGATGGTACGCGACCSizeHit CountTotal NormTotal
No Reads
droRho1
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-TTGTGTTATCTTTCTCTAATCTTTTTTAA--TGCA-------AAAAT----T------CTTTCTAGATTTATAATT---------------------------------------CACTGACTCACTA-AAT--------GCTTATCGGTCATTAACAT-----------ATAT---TTCA----TTTATTTTTAGATTTTTTGGTATCTTTGAGCAGCGACAACCACTATTGATGGTACGCGACCSizeHit CountTotal NormTotal
No Reads
droFic1
ACCAAT----CA-ATTTTATCCCATC-------------------------------------------------------------------------------------------------------------------------ATATTAA-------------------------TACCCATCCATAAA-CTCATAAATAAA------------------AT------------TATTCAAATCTTTTTCAA--AGCA----CCAGGAAGCCTTT------C-----TGGTTTTTTAC----------------------------------------CCATGACTCACCAAAGT--------GCTTATCGGACATTAACAT-----------TAAGACTTGTTTTTTGTTTTGTTTAGATTTTTTGGTATCTTCGAGCAGCGGCAACCACTTTTTATGATTCGCGACCSizeHit CountTotal NormTotal
No Reads
droKik1
CTTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCGTATCAT----------------------------------------TAGTGAGTCACAA-AAT--------GCTTATCGGACATTGATTT-----------TGTT---TTTT----TAATTTTTTAGATTTTTCGGTATCTTTGAACAGCGACAACCACTCATAATGGTACGCGATCSizeHit CountTotal NormTotal
No Reads
droAna3
TATCCC----CC-AATTAGACA-A--------------------------------------AA--AAAAATATACGACAAAAGTTT-------TTGTA------------GTTTG-----AGAGCT-AAGAAAAAACCCATTGGCTAGGTTATGAT---TATTTTTCGGTGTCTTA-----------------------AAAGAA-ACTATACGAATATATTT------------------------TTTTTTGAAACGC------A--------------------------------ACGCAACTTTCTTAATTATTAAAA-----------------------------------------------TACAGTCATTACTAC-----------CAACAC-T---AT--TTTCGTTGTAGGATTTATGGTATCTTCGAGCAGCGGCAGCCACTTTTCATGATTAAAGACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTATGGTATCTTCGAGCAGC...........................2314.004000130
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATGGTATCTTCGAGCAGC...........................2212.002000020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCGAGCAGCGGCAGCCACTTTTCAT...........2911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTTTCATGATTAAAGA..2011.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTATCTTCGAGCAGC...........................1911.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAGCGGCAGCCACT.................1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGGTATCTTCGAGCAGC...........................2011.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGGTATCTTCGAGCAG............................2011.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTATCTTCGAGCAGCGGCA.......................2311.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCTTCGAGCAGCGGC........................1911.001000010
droBip1
ATATATATAGGC-A---------A--------------------------------------AATAAAAAATATAAGATAAGAGCTA-------TTA-A------------GCTTG-----AGAGCT-AAGAAAGAAATTATTGGCTAGGTTATGGTGTTTATTTTTAGGTGTTTTT-----------------------AATGT---------------TTTT-------------TAAA-TCGACCTTTTTAAA--ACCT----TAAGTGTT----T------C-----------------------TAT--------------------------------AAAATCCATTA-ACT--------ATTCTATAGATACTATCAT-----------TAAA---TCCA-T--TTTTATTGTAGGGTTTTTGGAATCTTCGAGCAACGGCAACCCCTATTAATGGTTCGAGACCSizeHit CountTotal NormTotal
No Reads
dp5
GTAAAAGAATAA-ATT--------------TTACCCATAGAACAAT------------------------------------------T-GGGTCTGAA------------CGTGG-----AGGTTA-AGCTAAAAAAGAATCGGATAGGTTAAGAC---CAGACTACGACCATATA-----------------------AAGGCATACAAGATAGAAATATTGATGGACGGTTATCAAATTCTAATCTTTTTAA------------------TTAATT------CTAATC-----TGCAACCCGAATCTGC--------------------AATTATCAGTA-----------A-AAT--------GATTAGCAGTCAATAACAT-----------TGTG---TACTTT--ATTTTACACAGAGTTTATGGTATCTTCGAGCAGCGCCAACCACTGATGATGATCCGCGACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGGTATCTTCGAGCAGCGC.........................2412.0020020000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAACCACTGATGATGATC.......2211.0010010000000
..AAAAGAATAA-ATT--------------TTACCCATAGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTATGGTATCTTCGAGC..............................2011.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGAGCAGCGCCAACCACT.................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAACCACTGATGATG..........1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCAACCACTGATGAT...........1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACCACTGATGATGATC.......1911.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGGTATCTTCGAGC..............................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAACCACTGATGATG..........1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCGAGCAGCGCCAACCACTGAT..............2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCGCCAACCACTGATGATG..........2411.0010000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTATCTTCGAGCAGCGCC........................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGCGCCAACCACTGATGATG..........2511.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCTTCGAGCAGCGCCAACC....................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCACTGATGATGATCCGC....2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTATGGTATCTTCGAG...............................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGGTATCTTCGAGCAGCC..........................2311.0010010000000
droPer2
GTATATATATAT-AAA--------------TT----------------------------------------------------------GGGTCTGAA------------CGTGG-----AGGCTA-AGCTAAAAAAGAATCGGATAGGTTAAGAC---CAGACTACGACCATATA-----------------------AAGGCATACAAGATAGAAATATTGATGGACGGTTATCAAATTCTAATCTTTTTAA------------------TTAATT------CTAATC-----TGCAACCCGACG-ACTCATTTGACAAATTAGAGTCAAATTATCAGTA-----------A-AAT--------GATTAGCAGTCAATAACAT-----------TGTG---TACTTT--ATTTTACACAGAGTTTATGGTATCTTCGAGCAGCGCCAACCACTGATGATGATCCGCGACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGGTATCTTCGAGC..............................1915.005300002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTATCTTCGAGCAGC...........................1912.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAACCACTGATGAT...........1811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTATGGTATCTTCGAGC..............................2011.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAACCACTGATGATGAT........2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCAACCACTGATGATGAT........2211.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGGTATCTTCGAGCAGCGC.........................2411.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTATGGTATCTTCGAGCAGC...........................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCAACCACTGATGAT...........1911.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAACCACTGATGATGATC.......2211.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGAGCAGCGCCAACCACT.................2111.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCAACCACTGATGATG..........1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTATCTTCGAGCAGCGC.........................2111.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATGGTATCTTCGAGCAGCGCC........................2511.001000001
droWil2
TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT--TTTAATTTCAGGGTCTATGGTATCTTTGAGCAGCGACAGCCACTGTTAATGTTGCGCGATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTATGGTATCTTTGAGCAGC...........................2215.00500500
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTATGGTATCTTTGAGC..............................1913.00300300
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTATCTTTGAGCAGCGACAGC.....................2512.00220000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGTATCTTTGAGCAGCGAC........................2312.00220000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTATGGTATCTTTGAGCAGC...........................2312.00201100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGGTATCTTTGAGC..............................1811.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTATGGTATCTTTGAGCAG............................2111.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTATGGTATCTTTGAGCA.............................2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTATGGTATCTTTGAGCAG............................2211.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGTATCTTTGAGCAGCGACAGCC....................2711.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGTATCTTTGAGCAGC...........................2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTATGGTATCTTTGAGC..............................2011.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTGAGCAGCGACAGC.....................1911.00101000
droVir3
ATAAAT----GC-TAA-----------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TTAAGTTATTTTTTAGTATAACTGTTTAA--CGGT----CGA------------------------GATAAGT-TT---------------------------------------TGATGACTCACAA-ATGTTGGACACTCTTATCGGTCAATGTCACCCAAAATGGAATGAA---TACTTT--TTGTTTTATAGGGTATTTGGCATCTTTGAGCAGCGCAAGCCGCTGCTGATGATACGCGATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAGCCGCTGCTGATG..........2016.006006000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGCCGCTGCTGATG..........1814.004003000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAGCCGCTGCTGATGATACGCG...2712.002002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTTGGCATCTTTGAGC..............................2012.002001000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGCCGCTGCTGATGATACGC....2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTGAGCAGCGCAAGCCGCT.................2311.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCCGCTGCTGATGATACG.....2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTGGCATCTTTGAGC..............................1911.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAGCCGCTGCTGAT...........1811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGCATCTTTGAGCAGC...........................2011.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCCGCTGCTGATGATACGC....2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGCCGCTGCTGATGAT........2011.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAGCAGCGCAAGCCGC..................2011.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGCCGCTGCTGATGATA.......2111.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
ATTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TCTATTTATAGGGTTTTTGGAATATTTGAGCAGCGCAAGCCGCTGTTGATGATACGCGACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGCAGCGCAAGCCGCT.................2116.006600000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGCAGCGCAAGCCGC..................2015.005500000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGGAATATTTGAGCAG............................2113.003300000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAGCCGCTGTTGATGATACGC....2612.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAATATTTGAGCAG............................1912.002100001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAGCCGCTGTTGATGAT........2212.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGCCGCTGTTGATGA.........1912.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAGCCGCTGTTGATG..........1912.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCCGCTGTTGATGA.........1812.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTGAGCAGCGCAAGCCGCT.................2312.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCCGCTGTTGATGATACGCGACC2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAATATTTGAGCAGCGCAAGCCGC..................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGAGCAGCGCAAGCCGCT.................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAGCCGCTGTTGATGA.........2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAGCCGCTGTTGATGAT........2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAATATTTGAGCAGC...........................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCGCTGTTGATGATACGC....2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATATTTGAGCAGCGCAAGCCGCT.................2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGGAATATTTGAGC..............................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCAGCGCAAGCCGCTGTTGATG..........2611.001100000
droGri2
G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCGGTCAA---CAT-----------TTTG-------TT--TATACTTCTAGGGTTTTCGGCATTTTTGAGCAACGCAACCCATTGCTGATGATACGTGATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGAGCAACGCAACCCATT.................2211.00101
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGCAACGCAACCCATTGCTGATG..........2711.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGAGCAACGCAACCC....................1911.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACGCAACCCATTGCTGATG..........2311.00110

Generated: 05/19/2015 at 03:02 PM