ID:

dsi_19733

 Coordinate:

2l:10012126-10012272 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.8

Flybase annnotation

five_prime_UTR [2l_10012190_10012350_+]; exon [2l_10012190_10013100_+]

No Repeatable elements found

Sense Strand Reads

------------------------------------------------------------------------------------------------------------------#####################################################################################################################################
GCCGAGATGAATCATGCAGCTAACGCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGGGAAACTAGATCAAATGAGCGAAAAATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGTGACAATGAAAAATTGAGGAATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTATCGCGATAAAGGAGAGGTGTATGAAAGTTTCTTTACAC
**************************************************************************************************.((((...(((..((((....))))..)))....))))............*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 O001
Testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 M053
female body
 O002
Head
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
.................................................................................................................................................................................................................TCGCGATAAAGGAGAGGTGTA................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTGAACGTGGATTGTGACAATG................................................................................................... 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATTTTACCAGTTATCTTTTTTATCGCGA................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................GTGAGCTGAACGTGG............................................................................................................... 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TACCAGTTATCTTTTTTATCGCGA................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACGTGGATTGTGACAATGAAAAATT............................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................TTTGAGGACTTGTGTTTACATTCA....................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................TTTGGTAATTTGAACGGGAAAC................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTTATCGCGATAAAGGAGAGGTGTA................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTTATCGCGATAAATGAGAGGTGTATGA.............. 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CTGAACGTGGATTGTGACAAT.................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTACCAGTTATCTTTTTTATCGCGATA.............................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ACCACTGGAGTGAATTAT................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TATCGCGATAAAGGAGAGGTG................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGGAGAGGTGTATGAAAGTTT........ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AACGGGGATTGTGACAATGAAAAAT............................................................................................. 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................AAAATGAGCGAAAAATCTGTG......................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................AACGTGGATTGTGACAAT.................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........ATCATGCAGCTAACGCGACTA........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................GAGCTGAACGTGGATTGTGACA...................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................GAACGTGGATTGGGACAATGAAAAATT............................................................................................ 27 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................ATTGTGACAATGAAAAATTGAG......................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................AACGTGGATTGTGACAATGAAAA............................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......TGAATCATGCAGCTAACGCGAT.......................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGAAAAATTGAGGAATAGTG................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................GTTATAGGAGAGGTGTATG............... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TTACTTAGTTGAACGTGGA.............................................................................................................. 19 3 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 5
..................................................................................GGAACATCTGTGGCGAA.................................................................................................................................................... 17 2 16 0.13 2 0 0 0 0 0 0 0 0 0 0 0 2
........................GGGACTATCGCTGGA................................................................................................................................................................................................................ 15 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................TTTATAATTTATTTTA...................................................... 16 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
............................CTATCGCTGGAGCCA............................................................................................................................................................................................................ 15 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
...............GCAGCTATCGCGAAAATCG..................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGGCTCTACTTAGTACGTCGATTGCGCTGATAGCGACCTCGGGAGCAAACCATTAAACTTGCCCTTTGATCTAGTTTACTCGCTTTTTAGACACCGCTTGGTGACCTCACTTAATAAAAATCACTCGACTTGCACCTAACACTGTTACTTTTTAACTCCTTATCACAAATGTAAGTAAAATATTAAATAAAATGGTCAATAGAAAAAATAGCGCTATTTCCTCTCCACATACTTTCAAAGAAATGTG
***************************************************************************************************.((((...(((..((((....))))..)))....))))............************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...............................................................................................................................................................................................................................TCCACATACTTTCAAAGAAAT... 21 0 1 1.00 1 1 0 0
.....................................................................................................................................ACCTCACACTGTTAC................................................................................................... 15 1 11 0.09 1 0 1 0
...CTCGACTTAGTACCACGAT................................................................................................................................................................................................................................. 19 3 12 0.08 1 1 0 0
............................................................................................................................................................................................................AAAAGACCGCTATTTCCT......................... 18 2 15 0.07 1 0 1 0
..........................................................................................................................................ACACTGTTACTTTCT.............................................................................................. 15 1 15 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:10012076-10012322 + dsi_19733 GCCGAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCGCG---ATAAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CAC
droSec2 scaffold_3:5758992-5759238 + GCCGAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGTTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCGCG---ATAAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CAC
dm3 chr2L:10333800-10334046 + GCCGAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCGCG---ATAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CAC
droEre2 scaffold_4929:10941030-10941276 + GCCAAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGACAA-ATCTGTGACGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCTCG---ATAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CAC
droYak3 2L:13012682-13012928 + GCCGAGATGAACCATGCATCTAAT---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCTCG---ATAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CAC
droEug1 scf7180000409554:4585354-4585599 - ACCGTGATGAATCATGCTGCTAAT---------------------GCAAGTTTCGATGGAGCCCTCGTTTGGTAATTTCAACGG-GAAACTAGATCAAATGAACGCAAA-ATCTATGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTC-AAGTTATCTTTTTTA-TCTCG---AAAAAGGAAAG----GCGTA----------------------TAAAAGTTTCTTTA---------CAC
droBia1 scf7180000302422:8241844-8242089 + ACCAAGATGAATCATGCTGCTGAT---------------------GCGAGTGTCGCTGGAGCCCTCGTTTGGTAATTTGAACGC-GAAACTAGATCAAATGAACGCAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---ATAAAGGAGAG----GCGTG----------------------CGACAGTTTCTTTA---------CAC
droTak1 scf7180000415438:547611-547876 + ACCAAGATGAATCATGCTGCTGATGTGGTGTAAAAAATCGCTGATGCAAAAGGCGGTGGAGCCCTCGTTTGGTAATTTGAACGGGGAAACTAGATCAAATGAACGCA---ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTG-TCTCG---ATAACGGAGAG----GCGTG----------------------CGAAAGTTTCTTTA---------CAC
droEle1 scf7180000491186:3428609-3428851 + ACGGTGATGAATCATGCAG---AT---------------------GCGAGTGGCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACCAGATCAAATGAACACAAA-ATCCGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---AAAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CAC
droRho1 scf7180000776565:10660-10896 - G--------AATCATGCTGCGGAT---------------------GCGAGTGGCGCTGGAGCCCTCGTTTGGTAATTTGGACGT-CAAACTAGATCAAATGAACGCAAA-ATCCGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---A-AAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CAC
droFic1 scf7180000453838:565943-566192 + ATCGAGATGAATCATGCTGCTGCTGCG--------------------GACAATCGCTGCAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAACGTAAA-ACTCATTGTGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCTATAAAAAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CAC
droKik1 scf7180000302472:3001979-3002209 - G------------------CTACT---------------------GCGAGCATAGCCCCATCCCTGGTTCCGTAATTCGGACG--GAAACTAGCTCAAATGAACGTAAA-ATGCAAATTGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---ATAACGGAGAGAGTGGCGTA----------------------TGCAAGTTTCTTTA---------CAC
droAna3 scaffold_12916:14167513-14167659 + -------------------------------------------------------------------------------------------------------------------------ACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGAAAATAGTGTTTACATT---TTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCT---AAAGAAGAGAG----GCATA----------------------TGAAAGTTTCTTTA---------CAA
droBip1 scf7180000396572:2793453-2793695 - GAC---ATGAATCATTCCCTAAAT---------------------GCGAAAGTCGCCGGATCCCTCGTTTGGTAATTTGAACGG-GTAACTAGCTCAAATGAACGTAAA-ATCCGTGACGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCT---AAAGAAGAGAG----GCATA----------------------TGAAAGTTTCTTTA---------CAA
dp5 Unknown_group_792:696-885 + G------------------------------------------------------------------------------------GAAACCAGCTCAATTGAACATCAACAT-TTTAAAGAACCACTAAAATGAACTATTTTTACTTAACTGAACGTGGATTGTATTGTGACAATGAAAAATTGAGGA--ATAGTGTT-GTATTCATTTTATAATTTATTTTA-AAGTTATCGTTTTTAATCTCT---AAATAAGAGAAA---TCATA----------------------TGAAAGTTTATTTA---------AGA
droPer2 scaffold_1:1148371-1148560 + G------------------------------------------------------------------------------------GAAACCAGCTCAATTGAACATCAACAT-TTTAATGAACCACTAAAATGAACTATTTTTACTTAACTGAACGTGGATTGTATTGTGACAATGAAAAATTGAGGA--ATAGTGTT-GTATTCATTTTATAATTTATTTTA-AAGTTATCGTTTTTAATCTCT---AAATAAGAGAAA---TCATA----------------------TGAAAGTTTATTTA---------AGA
droWil2 scf2_1100000004967:1195238-1195361 - ------------------------------------------------------------------------------------------------------------------------------------------TTATTTCTGAGATGAACGTGGATTGT-----TGCAATGAAATAGTGACAA--ATAGTGTTTACATTGTTTTTATAATTTATTTTA-AAATTCTTTTTT--AGTCCCT-TGC-AATAGTATA----GTTTA----------------------CGACAATTTC----------------
droVir3 scaffold_12723:72149-72301 + G-----------------------------------------------------------------------------------------------------------------------AACTAAAGAAATGAATTGTTTTAGGTGAACTGAATGTGGATTGTA---AAACAATGAAAAAGTGATAA--ATAGTGTTTACATTTGTTTTCTAATTTGTTTTA-AAGTTATAATTTAAA-ATATA---ACAAACCA----------GT----------------------TAAAGGTGTTCTTATTCCATC--AAA
droMoj3 scaffold_6262:24015-24170 + G-----------------------------------------------------------------------------------------------------------------------AACTATTGAAGTGAGCTATTTTCGGTGATCTGAACATGGGTTGTA---AAACGATGAAAAACTGATAA--GTTGTCTTTAACTTTGTTTTCTAATTTGGTTTA-AAGTTATAATTTAAA-ATATA---ACAAAAAACAG----ACC---------------------------AGATTTACTTATTCCATAAAAAC
droGri2 scaffold_15126:1647608-1647779 + G-----------------------------------------------------------------------------------------------------------------------AACTATGGCAATGAGTTATTTTCGGTGAGCTGAATGTGGATTGTA---AAACAATGAAAAAGTGACAA--ATAGTGTTTACATTTGTTTTCTAATTTGTTTTA-AAGTTATAATTTTCA-AAAATATAAC-----ACAA----GTGCAAAGCGTTGTGCGCTGTTCCAACCAAAAGTGTCAACA---------AGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCCGAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCGCG---ATAAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................TCGCG---ATAAAGGAGAG----GTGTA----------------------..........................2112.00200000000000002000
.....................................................................................................................................................CTGAACGTGGATTGT-----GACAATG............................................................................................................................................2212.00200200000000000000
.........................................................................................................................................................................................................................ATTTTACCAGTTATCTTTTTTA-TCGCG---A...................................................................2811.00100000010000000000
................................................................................................................................................GTGAGCTGAACGTGG.............................................................................................................................................................1511.00100000000001000000
.............................................................................................................................................................................................................................TACCAGTTATCTTTTTTA-TCGCG---A...................................................................2411.00100000001000000000
.........................................................................................................................................................ACGTGGATTGT-----GACAATGAAAAATT.....................................................................................................................................2511.00100100000000000000
...................................................................TTTGGTAATTTGAACGG-GAAAC..................................................................................................................................................................................................................................2211.00100001000000000000
.........................................................................................................................................................................................................................................TTTTTA-TCGCG---ATAAAGGAGAG----GTGTA----------------------..........................2711.00100000000001000000
.....................................................................................................................................................CTGAACGTGGATTGT-----GACAAT.............................................................................................................................................2111.00100000001000000000
............................................................................................................................................................................................................................TTACCAGTTATCTTTTTTA-TCGCG---ATA.................................................................2711.00100000001000000000
.........................................................................................................................ACCACTGGAGTGAATTAT.................................................................................................................................................................................1811.00100001000000000000
.............................................................................................................................................................................................................................................TA-TCGCG---ATAAAGGAGAG----GTG..................................................2111.00100000000000001000
...........................................................................................................................................................................................................................................................AAGGAGAG----GTGTA----------------------TGAAAGTTT.................2211.00100000000000001000
........................................................................................................................................................AACGTGGATTGT-----GACAAT.............................................................................................................................................1811.00100001000000000000
..........ATCATGCAGCTAAC---------------------GCGACTA........................................................................................................................................................................................................................................................................2111.00100001000000000000
..................................................................................................................................................GAGCTGAACGTGGATTGT-----GACA...............................................................................................................................................2211.00100000010000000000
...............................................................................................................................................................ATTGT-----GACAATGAAAAATTGAG..................................................................................................................................2211.00100000000000100000
........................................................................................................................................................AACGTGGATTGT-----GACAATGAAAA........................................................................................................................................2311.00100000001000000000
.......TGAATCATGCAGCTAAC---------------------GCGAT..........................................................................................................................................................................................................................................................................2211.00100000000000001000
..............................................................................................................................................................................TGAAAAATTGAGGA--ATAGTG........................................................................................................................2011.00100000100000000000
...............................................................................................................................................................................................................TTTATAATTTATTTTA.............................................................................................16110.09100000010000000000
.................................................CTATCGCTGGAGCCA............................................................................................................................................................................................................................................................15130.08100000000100000000
droSec2
GCCGAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGTTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCGCG---ATAAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................AGTTGAACGTGGATTGT-----GACAAT.............................................................................................................................................2312.0021100
.........................................................................................................................................................................GACAATGAAAAATTGAGGA--ATAGTG........................................................................................................................2512.0020002
..............................................................................................................................................................................TGAAAAATTGAGGA--ATAGTG........................................................................................................................2012.0020101
.................................................................................................................................................................................AAAATTGAGGA--ATAGTGTT......................................................................................................................1912.0020101
..................................................................................................................................................GAGTTGAACGTGGATTGT-----...................................................................................................................................................1812.0020020
................................................................................................................................................................................AAAAATTGAGGA--ATAGTG........................................................................................................................1812.0021001
................................................................................................................................................................................AAAAATTGAGGA--ATAGTGTTTACATT................................................................................................................2612.0020200
...........................................................................................................................................................................CAATGAAAAATTGAGGA--ATAGTG........................................................................................................................2312.0020101
.........................................................................................................................................................................GACAATGAAAAATTGAGGA--ATAGTGT.......................................................................................................................2611.0010100
..........................................................................................................................................................................ACAATGAAAAATTGAGGA--ATAGTGTT......................................................................................................................2611.0010010
................................................................................................................................................................................AAAAATTGAGGA--ATAGTGTTTACA..................................................................................................................2411.0010001
.............................................................................................................................................................................ATGAAAAATTGAGGA--ATAGTGTTTACAT.................................................................................................................2811.0010100
......................................................................................................................................................................................................................................TCTTTTTTA-TCGCG---ATAAAGGAGAG----G....................................................2611.0010100
.............................................................................................................................................TTAGTGAGTTGAACGTGGATTGT-----G..................................................................................................................................................2411.0010001
..................................................................................................................................................GAGTTGAACGTGGATTGT-----GA.................................................................................................................................................2011.0010100
...............................................................................................................................................................................GAAAAATTGAGGA--ATAGTG........................................................................................................................1911.0010100
............................................................................................................................................................................AATGAAAAATTGAGGA--ATAGTG........................................................................................................................2211.0010001
................................................................................................................................................................................................................................................TCGCG---ATAAAGGAGAG----GTGTA----------------------TGAAAG....................2711.0010001
...................................................................................................................................................................................AATTGAGGA--ATAGTGTTTACA..................................................................................................................2111.0010001
.........................................................................................................................................ATTTTTAGTGAGTTGAACG................................................................................................................................................................1911.0010010
...................................................................................................................................................................................AATTGAGGA--ATAGTGTTTACATTCA..............................................................................................................2511.0010100
...............................................................................................................................................AGTGAGTTGAACGTGGATTG.........................................................................................................................................................2011.0010010
..................................................................................................................................................GAGTTGAACGTGGATTGT-----G..................................................................................................................................................1911.0010010
.............................................................................................................................................................................ATGAAAAATTGAGGA--ATAGTGTTTACA..................................................................................................................2711.0010100
............................................................................................................................................................................AATGAAAAATTGAGGA--ATAGTGTT......................................................................................................................2411.0010001
.................................................................CGTTTGGTAATTTGAACGG-GA.....................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................TA-TCGCG---ATAAAGGAGAG----GTGT.................................................2211.0010100
............................................................................................................................................................................................................................................TTA-TCGCG---ATAAAGGAGAG----GTGT.................................................2311.0010010
................................................................................................................................................GTGAGTTGAACGTGGATTG.........................................................................................................................................................1911.0010001
......................................................................................................................................ATTATTTTTAGTGAGTTGAACG................................................................................................................................................................2211.0010100
...............................................................................................................................................AGTGAGTTGAACGTGGATTGT-----GACAA..............................................................................................................................................2611.0010010
.........................................................................................................................................................................................................................................TTTTTA-TCGCG---ATAAAGGAGAG----GTGT.................................................2611.0010100
............................................................................................................................................TTTAGTGAGTTGAACGTGGA............................................................................................................................................................2011.0010001
.................................................................................................................................................................................AAAATTGAGGA--ATAGTGT.......................................................................................................................1811.0010001
dm3
GCCGAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCGCG---ATAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.......................................................................................AACTAGATCAAATGAGCGAAAA-ATCTC.........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACTGGAGTGAATTATTTTTAGTGAGCTG....................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...................................................ATCGCTGGAGCCCTCGTTTGGTAA.................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................ACTGGAGTGAATTATTTTTAGT..........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................GGCGAACCACTGGAGTGAA.....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................ACAATGAAAAATTGAGGA--ATAGTGT.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................GACAATGAAAAATTGAGGA--ATAGTGTTTA....................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AATGAAAAATTGAGGA--ATAG..........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TGAGCTGAACGTGGATTG.........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..................................................TATCGCTGGAGCCCTCGTT.......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ATGAAAAATTGAGGA--ATA...........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................A-TCGCG---ATAAAGGAGAG----GC...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................GCTGAACGTGGATTGT-----GACA...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................TTTTAGTGAGCTGAACGTGGATTGT-----G..................................................................................................................................................2611.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTGAGGA--ATAGTGTTTACATTC...............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................ATTATTTTTAGTGAGCTGAACG................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................TGAACGTGGATTGT-----GACAATG............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................TTA-TCGCG---ATAAAGGAGAG----GC...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGATTGT-----GACAATGAAAAATTGA...................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTTTTA-TCGCG---ATAAAGGAGA..........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TTATTTTTAGTGAGCTGAACGTGGATT..........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AG----GCGTA----------------------TGAAAGTTTCTT..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................TTTAGTGAGCTGAACGTGGATTGT-----G..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................TTAGTGAGCTGAACGTGGATT..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................TGAATTATTTTTAGTGAGCTGAACG................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATGAATCATGCAGCTAAC---------------------GCG............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTTA-TCGCG---ATAAAGGAGAG----GCGTA----------------------A.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................ATCTGTGGCGAACCACTGGAGTGAA.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................TTGT-----GACAATGAAAAATTGA...................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGATTGT-----GACAATGAAAAATTGAGG.................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................GAGCTGAACGTGGATTGT-----GACAATGAA..........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTAGTGAGCTGAACGTGG.............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................GCTGAACGTGGATTGT-----GACAAT.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AGCTGAACGTGGATTGT-----GACA...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................ACAATGAAAAATTGAGGA--ATAGT.........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................TTTTA-TCGCG---ATAAAGGAGAG----GCG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................AAATGAGCGAAAA-ATCTGTGGCG....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................GTTATCTTTTTTA-TCGCG---ATAAA...............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................CCACTGGAGTGAATTATTTTTAG...........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CGCTGGAGCCCTCGTTTGGTAATTTGA............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................TTTTAGTGAGCTGAACGTGGAT...........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................AAAAATTGAGGA--ATAGTGTT......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................AAAATTGAGGA--ATAGTGTTTACATT................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................GAGCTGAACGTGGATTGC-----...................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................GACTATCGCTGGAGCCCTCG.........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................GCG---ATAAAGGAGAG----GCGTA----------------------TGAAA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................GAAAA-ATCTGTGGCGAAC.................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATGCAGCTAAC---------------------GCGACTATCGCT...................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................ATTGT-----GACAATGAAAAAT......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CGTGGATTGT-----GACAATGAA..........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ATCAAATGAGCGAAAA-ATCTG.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................ACCAGTTATCTTTTTTA-TCGCG---AT..................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................AATGAAAAATTGAGGA--ATAGTGT.......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTTTA-TCGCG---ATAAAGGAGAG----GC...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................................AAAGGAGAG----GCGTA----------------------TGAAAGTTT.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................CGTGGATTGT-----GACAATGAAAAAT......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................GAAAAATTGAGGA--ATAGTGT.......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................ACTGGAGTGAATTATTTTT.............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................TTTA-TCGCG---ATAAAGGAGAG----GC...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................AGTGAGCTGAACGTGGATTGT-----GACAAT.............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................GAGCTGAACGTGGATTGT-----C..................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GTGAGCTGAACGTGGATT..........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGAGGA--ATAGTGTTTACA..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGAACGTGGATTGT-----GACAAT.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATTGAGGA--ATAGTGTTTACAT.................................................................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CAGTTATCTTTTTTA-TCGCG---AC..................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................AATTGAGGA--ATAGTGTTT.....................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................CGTGGATTGT-----GACAATGAAAAATTGA...................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCCAAGATGAATCATGCAGCTAAC---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGACAA-ATCTGTGACGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCTCG---ATAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................GAAAAATTGAGGA--ATAGTG........................................................................................................................1911.0010000100
..................................................................................................................................................................................AAATTGAGGA--ATAGTGTT......................................................................................................................1811.0010000010
...............................................................................................................................................................................GAAAAATTGAGGA--ATAGT.........................................................................................................................1811.0010000010
....................................................................................................................................................GCTGAACGTGGATTGT-----GA.................................................................................................................................................1811.0010000010
..........................................................................................................................................................CGTGGATTGT-----GACAATGAAAAATT.....................................................................................................................................2411.0010000100
droYak3
GCCGAGATGAACCATGCATCTAAT---------------------GCGACTATCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAGCGAAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTACCAGTTATCTTTTTTA-TCTCG---ATAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................TTGT-----GACAATGAAAAATT.....................................................................................................................................1811.00110000000000
..........................................................................................................................................................................ACAATGAAAAATTGAGGA--ATAGTG........................................................................................................................2411.00100000010000
..........................................................................................................................................................CGTGGATTGT-----GACAATGA...........................................................................................................................................1811.00100100000000
....................................................................................................................................................................................ATTGAGGA--ATAGTGTTTACA..................................................................................................................2011.00100010000000
...........................................................................................................................................................................CAATGAAAAATTGAGGA--ATAGTG........................................................................................................................2311.00100000100000
..................................................................................................................................................GAGCTGAACGTGGATTGC-----...................................................................................................................................................1820.50100100000000
droEug1
ACCGTGATGAATCATGCTGCTAAT---------------------GCAAGTTTCGATGGAGCCCTCGTTTGGTAATTTCAACGG-GAAACTAGATCAAATGAACGCAAA-ATCTATGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTC-AAGTTATCTTTTTTA-TCTCG---AAAAAGGAAAG----GCGTA----------------------TAAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droBia1
ACCAAGATGAATCATGCTGCTGAT---------------------GCGAGTGTCGCTGGAGCCCTCGTTTGGTAATTTGAACGC-GAAACTAGATCAAATGAACGCAAA-ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---ATAAAGGAGAG----GCGTG----------------------CGACAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droTak1
ACCAAGATGAATCATGCTGCTGATGTGGTGTAAAAAATCGCTGATGCAAAAGGCGGTGGAGCCCTCGTTTGGTAATTTGAACGGGGAAACTAGATCAAATGAACGCA---ATCTGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTG-TCTCG---ATAACGGAGAG----GCGTG----------------------CGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droEle1
ACGGTGATGAATCATGCAG---AT---------------------GCGAGTGGCGCTGGAGCCCTCGTTTGGTAATTTGAACGG-GAAACCAGATCAAATGAACACAAA-ATCCGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---AAAAAGGAGAG----GCGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droRho1
G--------AATCATGCTGCGGAT---------------------GCGAGTGGCGCTGGAGCCCTCGTTTGGTAATTTGGACGT-CAAACTAGATCAAATGAACGCAAA-ATCCGTGGCGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---A-AAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droFic1
ATCGAGATGAATCATGCTGCTGCTGCG--------------------GACAATCGCTGCAGCCCTCGTTTGGTAATTTGAACGG-GAAACTAGATCAAATGAACGTAAA-ACTCATTGTGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCTATAAAAAAGGAGAG----GTGTA----------------------TGAAAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droKik1
G------------------CTACT---------------------GCGAGCATAGCCCCATCCCTGGTTCCGTAATTCGGACG--GAAACTAGCTCAAATGAACGTAAA-ATGCAAATTGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCG---ATAACGGAGAGAGTGGCGTA----------------------TGCAAGTTTCTTTA---------CACSizeHit CountTotal NormTotal
No Reads
droAna3
-------------------------------------------------------------------------------------------------------------------------ACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGAAAATAGTGTTTACATT---TTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCT---AAAGAAGAGAG----GCATA----------------------TGAAAGTTTCTTTA---------CAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................GAAAAATTGAGGAAAATAGTG........................................................................................................................2111.001000010
..................................................................................................................................................GAGCTGAACGTGGATTGT-----GAC................................................................................................................................................2111.001010000
................................................................................................................................................................................AAAAATTGAGGAAAATAGTGTTTA....................................................................................................................2411.001000010
droBip1
GAC---ATGAATCATTCCCTAAAT---------------------GCGAAAGTCGCCGGATCCCTCGTTTGGTAATTTGAACGG-GTAACTAGCTCAAATGAACGTAAA-ATCCGTGACGAACCACTGGAGTGAATTATTTTTAGTGAGCTGAACGTGGATTGT-----GACAATGAAAAATTGAGGA--ATAGTGTTTACATTCATTTTATAATTTATTTTA-AAGTTATCTTTTTTA-TCTCT---AAAGAAGAGAG----GCATA----------------------TGAAAGTTTCTTTA---------CAASizeHit CountTotal NormTotal
No Reads
dp5
G------------------------------------------------------------------------------------GAAACCAGCTCAATTGAACATCAACAT-TTTAAAGAACCACTAAAATGAACTATTTTTACTTAACTGAACGTGGATTGTATTGTGACAATGAAAAATTGAGGA--ATAGTGTT-GTATTCATTTTATAATTTATTTTA-AAGTTATCGTTTTTAATCTCT---AAATAAGAGAAA---TCATA----------------------TGAAAGTTTATTTA---------AGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................AACGTGGATTGTATTGTGAC................................................................................................................................................2012.0020110000000
...........................................................................................................................................TTTTACTTAACTGAACGTGGATTGT........................................................................................................................................................2512.0020000000020
................................................................................................................................................................................AAAAATTGAGGA--ATAGTGT.......................................................................................................................1911.0010000100000
................................................................................................................................................CTTAACTGAACGTGGATTGT........................................................................................................................................................2011.0010100000000
....................................................................................................................................................ACTGAACGTGGATTGTATTG....................................................................................................................................................2011.0010010000000
..................................................................................................................................................TAACTGAACGTGGATTGT........................................................................................................................................................1811.0010000100000
..............................................................................................................................................TACTTAACTGAACGTGGATTGTATTG....................................................................................................................................................2611.0010100000000
droPer2
G------------------------------------------------------------------------------------GAAACCAGCTCAATTGAACATCAACAT-TTTAATGAACCACTAAAATGAACTATTTTTACTTAACTGAACGTGGATTGTATTGTGACAATGAAAAATTGAGGA--ATAGTGTT-GTATTCATTTTATAATTTATTTTA-AAGTTATCGTTTTTAATCTCT---AAATAAGAGAAA---TCATA----------------------TGAAAGTTTATTTA---------AGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................GATTGTATTGTGACAATG............................................................................................................................................1811.001100000
.........................................................................................................................................................ACGTGGATTGTATTGTGAC................................................................................................................................................1911.001100000
.................................................................................................................................................................TGTATTGTGACAATGAAAAATTGAGG.................................................................................................................................2611.001010000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------TTATTTCTGAGATGAACGTGGATTGT-----TGCAATGAAATAGTGACAA--ATAGTGTTTACATTGTTTTTATAATTTATTTTA-AAATTCTTTTTT--AGTCCCT-TGC-AATAGTATA----GTTTA----------------------CGACAATTTC----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................TTCTGAGATGAACGTGGATTGT-----TGCAA..............................................................................................................................................2712.00220000
...................................................................................................................................................................T-----TGCAATGAAATAGTGAC..................................................................................................................................1812.00220000
...............................................................................................................................................TCTGAGATGAACGTGGATTG.........................................................................................................................................................2011.00100001
............................................................................................................................................ATTTCTGAGATGAACGTG..............................................................................................................................................................1811.00100010
..............................................................................................................................................TTCTGAGATGAACGTGGATTGT-----TGC................................................................................................................................................2511.00100100
.....................................................................................................................................................ATGAACGTGGATTGT-----TGC................................................................................................................................................1811.00100010
................................................................................................................................................CTGAGATGAACGTGGATTGT-----TGC................................................................................................................................................2311.00110000
...................................................................................................................................................................T-----TGCAATGAAATAGTGACA.................................................................................................................................1911.00100010
...................................................................................................................................................................................................................................TTCTTTTTT--AGTCCCT-TGC-AAT...............................................................2211.00101000
....................................................................................................................................................GATGAACGTGGATTGT-----TGC................................................................................................................................................1911.00100001
...............................................................................................................................................TCTGAGATGAACGTGGATTGT-----TGC................................................................................................................................................2411.00100100
..........................................................................................................................................TTATTTCTGAGATGAACGTGGATTG.........................................................................................................................................................2511.00101000
droVir3
G-----------------------------------------------------------------------------------------------------------------------AACTAAAGAAATGAATTGTTTTAGGTGAACTGAATGTGGATTGTA---AAACAATGAAAAAGTGATAA--ATAGTGTTTACATTTGTTTTCTAATTTGTTTTA-AAGTTATAATTTAAA-ATATA---ACAAACCA----------GT----------------------TAAAGGTGTTCTTATTCCATC--AAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................GTTTACATTTGTTTTCTAAT.....................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
..............................................................................................................................................AGGTGAACTGAATGTGGA............................................................................................................................................................1812.002000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................AGGTGAACTGAATGTGGATTG.........................................................................................................................................................2112.002000000000020000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATA---ACAAACCA----------GT----------------------TAAAGGT...................2111.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................GGTGTTCTTATTCCATC--AA.1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................ACTGAATGTGGATTGTA---AAACAATGAAAAAGTG....................................................................................................................................3311.001000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................AACCA----------GT----------------------TAAAGGTGTTCT..............1911.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TAAAGGTGTTCTTATTCCATC--AAA2411.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................GAACTGAATGTGGATTGTA---AAAC................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................ACAATGAAAAAGTGATAA--ATAG..........................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
droMoj3
G-----------------------------------------------------------------------------------------------------------------------AACTATTGAAGTGAGCTATTTTCGGTGATCTGAACATGGGTTGTA---AAACGATGAAAAACTGATAA--GTTGTCTTTAACTTTGTTTTCTAATTTGGTTTA-AAGTTATAATTTAAA-ATATA---ACAAAAAACAG----ACC---------------------------AGATTTACTTATTCCATAAAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................ATTGAAGTGAGCTATTTTCGGTGATCT.....................................................................................................................................................................2711.001000001
...............................................................................................................................................................................................................TTTCTAATTTGGTTTA-AAGT........................................................................................2011.001100000
...............................................................................................................................................................................................TTGTCTTTAACTTTGTTTTCTAATTT...................................................................................................2611.001100000
............................................................................................................................................TTCGGTGATCTGAACATGGGTTGTA---....................................................................................................................................................2511.001000001
........................................................................................................................................................................................................ACTTTGTTTTCTAATTTGGTTTA-AAGTT.......................................................................................2811.001100000
................................................................................................................................................................................................TGTCTTTAACTTTGTTTTCTAATTT...................................................................................................2511.001100000
droGri2
G-----------------------------------------------------------------------------------------------------------------------AACTATGGCAATGAGTTATTTTCGGTGAGCTGAATGTGGATTGTA---AAACAATGAAAAAGTGACAA--ATAGTGTTTACATTTGTTTTCTAATTTGTTTTA-AAGTTATAATTTTCA-AAAATATAAC-----ACAA----GTGCAAAGCGTTGTGCGCTGTTCCAACCAAAAGTGTCAACA---------AGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................GCAAAGCGTTGTGCGCTGTTCCAA...........................2411.00110

Generated: 05/18/2015 at 06:59 PM