ID:

dsi_19675

 Coordinate:

2r:4211260-4211409 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.2 -41.0 -40.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GAGGAGGAGCCAGTGGAACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTATTACACAGTATATATTGATGCCCTACAAGTGCATCGTGGCAGATTGCGGCGGTGTCGGTGTCGTCTGCAAATGGTGCCAATATAAAATCGCACCCATAACGTGATTTCCCCCTACCAAAGTGTGTGTGTGTGTGAGTGTGCGGGCCATTTGCCAGTTCTTGGCCCTGATTTGTTCCCATGGCAGGTGATTAGCCATT
**************************************************........((((....))))..((((((((...(((((((.((((((.(((.((....)).))).))))))..)))))))..........((((((.((((.((..((((..........)))).)))))).)))))).)))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR902009
testis
 M025
embryo
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
.............................GAGGAGATGCTATACGCTCAGGGC..................................................................................................................................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................CCATGTCGAGCCAGGAGATG.................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............GAACCATGTCGAGCGAGGAG....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................ATGTCGAGCGAGGAGATGCT.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................ATGTCGAGCGAGGAGATGCG.................................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............GAACCATGTCGAGCGAGGAGA...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................CGAGGAGATGCTATACGCTCAGGGC..................................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........CAGTGGAACCATGTCGAGC............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................GATGCTATACGCTCAGGGC..................................................................................................................................................................................................... 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................GGTGTCGTCTGCAAATGGTG......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...............................GGAGATGCTATACGCTCAGGGC..................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................AACCATGTCGAGCGAGGAGA...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................ACCATGTCGAGCGAGGAGATGCG.................................................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........CCAGTGGAACCATGTCGAGCGAGGA........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................................................GGTATTACACAGTATATA....................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.................ACCCTGTCGGGCGAGGAGATC.................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................GCGGGCCGCTTGCCAGTT........................................ 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TCGTCTGCAGATGGTTCCGA..................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0
......................GTCGAGCGGGGAGAT..................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 1
.......................TCGAGCGGGGAGATG.................................................................................................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 0 0 1
............................................................................................CGGATTGCGGCGGTG............................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0
....................ATGTCGAGCGGGGAGT...................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CTCCTCCTCGGTCACCTTGGTACAGCTCGCTCCTCTACGATATGCGAGTCCATAATGTGTCATATATAACTACGGGATGTTCACGTAGCACCGTCTAACGCCGCCACAGCCACAGCAGACGTTTACCACGGTTATATTTTAGCGTGGGTATTGCACTAAAGGGGGATGGTTTCACACACACACACACTCACACGCCCGGTAAACGGTCAAGAACCGGGACTAAACAAGGGTACCGTCCACTAATCGGTAA
**************************************************........((((....))))..((((((((...(((((((.((((((.(((.((....)).))).))))))..)))))))..........((((((.((((.((..((((..........)))).)))))).)))))).)))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body
.................................................................................................................AGCAGACGTCTACCAAGG....................................................................................................................... 18 2 5 3.40 17 17 0 0 0
.................................................................................................................AGCAGACGTCTACCA.......................................................................................................................... 15 1 14 3.00 42 42 0 0 0
.........................................................................................................ACAGCCACAGCAGACGTTTAC............................................................................................................................ 21 0 1 1.00 1 1 0 0 0
................................................................AATAGCTACGGGTTGTTCACGT.................................................................................................................................................................... 22 3 2 0.50 1 0 1 0 0
........................................................................CGGGATGCTCACGTAG.................................................................................................................................................................. 16 1 4 0.25 1 0 0 1 0
................................................................................................................CAGCAGACGTCTACCA.......................................................................................................................... 16 1 6 0.17 1 1 0 0 0
................................................................................TCACCTAGCACCGTC........................................................................................................................................................... 15 1 11 0.09 1 0 1 0 0
................................................................................................................CAGCAGACGTCTACCAA......................................................................................................................... 17 2 20 0.05 1 1 0 0 0
.............................................................................................................................................GCGAGGTTATTGCACT............................................................................................. 16 2 20 0.05 1 0 0 1 0
.................................................................................CAGGTAACACCTTCTAACG...................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:4211210-4211459 + dsi_19675 GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCC-TACCAAA----------------------------------------GTG------TGTG----TGTG--TGT-------GAGTGTGCGGGCCATTTGCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATT
droSec2 scaffold_1:1045130-1045383 + dse_612 GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCC-TACCAAA----------------------------------------GTGTG--TGTGTG----TGTG--TGT-------GAGTGTGCTGGCCATTTGCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATT
dm3 chr2R:3387964-3388219 + GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCTAGCGAGGAGATGCTATACGCGCAGGTA-----TTGCACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCC-GTCCGAA----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTGTGTGCAGGCCATTCGACAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATT
droEre2 scaffold_4929:19210275-19210515 - GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTTCACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCC--GTCCGAA----------------------------------------CT------------------G--TGT-------GAGTGTGCGGGCCATTTGCTAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTTCCATGGCAGGTTAT--TAGCCATT
droYak3 2L:16065964-16066206 + GAG----------------GAGGA-------------------------GCTAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCAG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCC--GTCCGAG----------------------------------------CTG----------------CG--TGT-------GAGTGTACGGGCCATTTGCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTTCCATGGCAGGTGAT--TAGCCATT
droEug1 scf7180000409672:5403637-5403885 + GGG----------------GAGGA-------------------------GCAAGTGG-AACCATGTCTAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGTGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCT--GCCCAAA----------------------------------------GTATTTGTTTG------------TGT-------GTGTGTGTGGGCCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCGATT
droBia1 scf7180000302292:2758284-2758525 - GAGT-------AG------AAGGA-------------------------GCCAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GAGATTTT----------------------------------------------------G------TGTGTG----TGTT--CGT-------GAGTGTGCGGGCCACTCTCCAGGT-A----T------------------------------------------------TGGCCCTGATTTGTTCCCATGACAGGTGAT--TAGCTATT
droTak1 scf7180000412807:167120-167360 + GAG----------------GAGGA-------------------------GCAAGTGG-AACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCC--------------------------------------------------GTG------TGTG----TGCG--TGT-------GTCTGTGTGGGCCATTCTCCAGGT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATT
droEle1 scf7180000491347:223042-223301 + GAGGCAGTGGTGGAC----GAGGA-------------------------GCAAGTGG-AACTATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAG------TATAATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCTTGGTCAAT----------------------------------------GTG------TGTG----TG---------------TGTGTGAGTGCCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATT
droRho1 scf7180000779868:21306-21556 - GAT----------------TAGGA-------------------------GCAAGTGG-AACGATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----ATACACAG------TATAATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCT-GGTCAAA----------------------------------------GTG------TGTG----TGTG--T---------GTGTCTGTGGGCCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATT
droFic1 scf7180000453948:145245-145500 + GAC----------------GAGGCC------------------------GCAAGTGTAAACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----T-ACACAG------TAT-ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCCCCTGGCCAAA----------------------------------------GTA------TGCG----TGCCTGTGT-------AGGTGTGTTGGTCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTTCCATGACAAGTGAT--TACCCACT
droKik1 scf7180000302385:951037-951309 + AAG----------------GAGGC-------------------------GCAGCGGG-AAAAATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACGTCCATCGTTGGATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGCG--GGT------------------GTCGG------TGTCG--------------------CT-------------------------GACGGTGCCAA------------TATAAAA-TGCAACAATAACCGTGATTCC-GCG-----------TGC-----------------------TT---------G------TGTTTG----TGTT--G---AGGCATGTGTGTGTGTGCCATTTGCC-GTT-C----TTCGCGTTCTCCC--CC---TTCCA------GT--TTCCATTGCT----CAGCCCTGATTTCTTCCC-------------------ATT
droAna3 scaffold_13266:16390327-16390555 - GGA----------------GAAGG-------------------------CCAGGAGA-AACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAA--TGATATATTGCT-GCTGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGC----GCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAA-ATTGCACCCATAGC-GTGATTTCTGT-----CGGT---------------------------------GT---ACGTG----T--TGT----TGTG--G---------GTGTATGTGGGCTG------------------------------------------------------------------------------------TGAC--------------AGT
droBip1 scf7180000395838:74508-74715 + GAG----------------GAG----------------------------------A-AACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAA--TGATATATTGCT-GCGGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGC----GCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAAAG-TGCACCCATAGC-GTGATTGGTGT-----CGGT---------------------------------GT---ACGTG----T--TAT----TGTG--G---------GTGTATGAG--------------------------------------------------------------------------------------------------------------
dp5 3:12356729-12357045 - dps_1185 -AG----------------GAGAA-------------------------CGTAACGG-AACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCAC------AT---TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGTGTCGGT------------------GTCGGTATC------------GCTTTAGG----ACGCC-------------------------AATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACT----------------------------------------GTT------TGCGTGTGTGT----GTGCT-CTCGTGTGTTTGCGCCATTTTCG---TTT----TTCACATT-TCTT--CA---TTCTACAAGCAGTGTG-TTCTTGCTCTATTAGCCC-------TTTCCATGGCAGGTGATGACAGGTATT
droPer2 scaffold_44:538842-539159 - GAG----------------GAGAA-------------------------CGTAACGG-AACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCAC------AT---TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGTGTCGGT------------------GTCGGTATC------------GCTTTAGG----ACGCC-------------------------AATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACT----------------------------------------GTT------TGCGTGTGTGT----GTGCT-CTCGTGTGTTTGCGCCATTTTCG---TTT----TTCACATT-TCTT--CA---TTCTACAAGCAGTGTG-TTCTTGCTCTATTAGCCC-------TTTCCATGGCAGGTGATGACAGGTATT
droWil2 scf2_1100000004382:121260-121524 - AGT----------------GGACC-------------------------ATCATCAT-CATCATGTCTAGCGAGGAGATATTATATGCTAAGGTA-----TTTGGCCCTTATAATA---ATTATTATTATCGGATGCCATACAAGTGCATTGTTGGCAAGAAGAGT--CAGTC-AGATGTTGTTTGCTTGGTTGGTGGGAGAATGGAGGGCGC----------------CCGCC-------------------------AATAGTGTTAA------------AAGCGGGTCTCATTCTCTCA-GCGTTTATGTGTTTGTCTGT----------------------------------------GTG--------TG----TGTA--TGT-------GTGCGTGCGTG------------------------------------------------------------------------TTTGACAGGTTGCCAAGACAGAAGAT----------
droVir3 scaffold_12875:17535126-17535370 + TCG----------------GACAG-------------------------G---CTGT-AATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACA--TTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGTTGGCA-ATTCC-G--CGCTGTTGTC------------------GT---------C---GTCGTCGA-----------------------------GCCCAGCGCTCCATAGTGTTAAGAATTGG-GGCTTATAAAAACGCATACATAAT-AACAATA--------ACAACGTGTGCTGCATGCATACGAGTGCATGTGCATGCGT---ATGTG----T--GTG----TGTG--T---------GTGTGTGTGTG------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:10480974-10481311 - CAC----------------GACACTGCGGCTGCCGTTGCTGGTGCTGCTGCTGCTGC-AATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACACATTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGT-TGGCAATTGCG---CGCTGTTGTC------------------GT---------C---GTCGTCG-TCGTCGTCGTCAGCTA-------------GCC-------TCATAGTGTTAAGAATGGGAGGCTTATAAAAACGCATACATAAT-AACAATA--------ACAACGTGCGATGCATGCATG--------T--------GTGCTCTGTG------TGTG----TGTG--T---------GTGTATGTGCGCCCATTTCA---TTTCGCTTTTGCATT-TCCTATTCGTTTCTTGCA-----------------------AGT------T------TCTTCCAGGTCAA--CCCTAATT
droGri2 scaffold_14441:3059-3387 + ACGG-------AGAAAAACAGCA----------------------------CGCTGC-AATCATGTCAAGCGAGGAGATGTTATACGCAAAGGTACA---TTACACAT------TA---TATATT-------GATGCCCCACAAGTGCATTGT-TGGCAATTGCTGCGCGCTGTCGT------------------------------CGTCGTCGTCGT-TGTTGTCG----CTGGCGTTTTACCTTTGCCAAGCGGCCAATAGTGTTAAGAATGGGGGGCTTATAAAAACGCATACATAAT-AACAATA--------ACAACGTGCACTGTATATATA--------TATATATATAT---ATGTG----TGTGTG----TGTG--TGT-------GTGTTTGTGCGCCAATTTCA---T-T----T------------------------------------------------TTGCATTTCTTTAATGTCTTGCAAGCTGCT--TGTGTCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCC-TACCAAA----------------------------------------GTG------TGTG----TGTG--TGT-------GAGTGTGCGGGCCATTTGCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................GAGGAGATGCTATACGCTCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000000000
........................................................G-AACCATGTCGAGCGAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..............................................................ATGTCGAGCGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..............................................................ATGTCGAGCGAGGAGATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
........................................................G-AACCATGTCGAGCGAGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
......................................................................CGAGGAGATGCTATACGCTCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
...................................................CAGTGG-AACCATGTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............................................................................GATGCTATACGCTCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................1921.00202000000000000000
...............................................................................................................................................................................GG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTG.........................................................................................................................................................................................................................................................2011.00100000010000000000
.........................................................................GGAGATGCTATACGCTCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................AACCATGTCGAGCGAGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...........................................................ACCATGTCGAGCGAGGAGATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..................................................CCAGTGG-AACCATGTCGAGCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...........................................................................................GGTA-----TTACACAG------TA---TATA........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
droSec2
GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCTCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCC-TACCAAA----------------------------------------GTGTG--TGTGTG----TGTG--TGT-------GAGTGTGCTGGCCATTTGCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................CAGTGG-AACCATGTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
......................................................................CGAGGAGATGCTATACGCTCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.....................................................GTGG-AACCATGTCGAGCGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
..................................................................CGAGCGAGGAGATGCTATACGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..............................................................................................................................................AAGTGCATCGT-GGCAGATT.................................................................................................................................................................................................................................................................................................................................................................1911.0010001
..................................................CCAGTGG-AACCATGTCGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................................................................CGAGCGAGGAGATGCTATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................TCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGT..........................................................................................................................................................................................................................................................2111.0010010
dm3
GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCTAGCGAGGAGATGCTATACGCGCAGGTA-----TTGCACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCCC-GTCCGAA----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTGTGTGCAGGCCATTCGACAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................AGGA-------------------------GCCAGTGG-AACCATGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG----TGTG--TGT-------GTGTG..................................................................................................................24202.955900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005700002000000
.................................................................................................................................................................................................................................................................................................................................AA----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTG....................................................................................................................25202.905800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000010600000000000003000000000000001004400000000000
...................GAGGA-------------------------GCCAGTGG-AACCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................G------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCC.......................................................................................................................................................................................................................................................2112.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GAGGA-------------------------GCCAGTGG-AACCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................AGCGAGGAGATGCTATACGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................G----TGTG--TGT-------GTGTGTGCAGGCCATTCGA....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................AGATTGCGG--CGGTGTCGG------------------------------TGT.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................AAGTGCATCGT-GGCAGAT..................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................ATGGTGCCAA------------TATAAAATCGC..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGGA-------------------------GCCAGTGG-AACCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCGACAGTT-C----T------------------------------------------------TGGCCC..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AGTGG-AACCATGTCTAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.....................GGA-------------------------GCCAGTGG-AACCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................GGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AA..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATGTCTAGCGAGGAGATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................GAGGAGATGCTATACGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TAAC-GTGATTTCCCCC-GTCCG..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GA-------------------------GCCAGTGG-AACCATGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATTTGTTCCCATGGCAGG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................GGCAGATTGCGG--CGGTGTCGG------------------------------T...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................GCGAGGAGATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................GCAGATTGCGG--CGGTGTCGG------------------------------T...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................GAGGAGATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................AGATGCTATACGCGCAGGGC-----G..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.AG----------------GAGGA-------------------------GCCAGTGG-AACCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..G----------------GAGGA-------------------------GCCAGTGG-AACCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGGA-------------------------GCCAGTGG-AACCATGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................GTGG-AACCATGTCTAGCGAGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................GAGGAGATGCTATACGCGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CGT----------------CTGCA-------------------------AATGGTGCCAA------------.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTGCACAG------TA---TATATT-------GATG...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGT-------GTGTGTGCAGGCCATTCGACAG.................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-C----T------------------------------------------------TGGCCCTGATTTGTTC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CCC-GTCCGAA----------------------------------------GTGTGTGTGTGT............................................................................................................................................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AA------------TATAAAATCGCACCCATAAC-GTGAT...............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGA-------------------------GCCAGTGG-AACCATGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTG.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ACCATGTCTAGCGAGGAGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................GTGG-AACCATGTCTAGCGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................TACAAGTGCATCGT-GGCAGATTGCGG--C..........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG----TGTG--TGT-------GTGTGTGC...............................................................................................................25200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000010000800000000000
......................GA-------------------------GCCAGTGG-AACCATGTCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................A----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTG....................................................................................................................24200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002001000000000030100000000
...............................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTG----TGTG--TGT-------GTGTGTGCA..............................................................................................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000500020000000
...............................................................................................................................................................................................................................................................................................................................CGAA----------------------------------------GTGTGTGTGTGTG----TGT....................................................................................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AA----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTGT...................................................................................................................26200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000400000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG----TGTG--TGT-------GTGTGTGCA..............................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000100020000000000
................................................................................................................................................................TTGCGG--CGGTGTCGG------------------------------TGGG................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................A----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTGTG..................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000
.................................................................................................................................................................................................................................................................................................................................AA----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTGTG..................................................................................................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000300000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTG----TGTG--TGT-------GTGTGTGC...............................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000010000
................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG----TGTG--TGT-------GTGT...................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG----TGTG--TGT-------GTGTGTG................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000200000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTGTGTG----TGTG--TGT-------GTGTGTGCA..............................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTG----TGTG--TGT-------GTGTGTGC...............................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG----TGTG--TGT-------GTGTGTGC...............................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
...............................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTG----TGTG--TGT-------GTGTGTG................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................A----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------GTGT...................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
.................................................................................................................................................................................................................................................................................................................................AA----------------------------------------GTGTGTGTGTGTG----TGTG--TGT-------G......................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droEre2
GAG----------------GAGGA-------------------------GCCAGTGG-AACCATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTTCACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCC--GTCCGAA----------------------------------------CT------------------G--TGT-------GAGTGTGCGGGCCATTTGCTAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTTCCATGGCAGGTTAT--TAGCCATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................GG-AACCATGTCAAGCGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...........................................................................AGATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
droYak3
GAG----------------GAGGA-------------------------GCTAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCTACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCAG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATCGCACCCATAAC-GTGATTTCCCC--GTCCGAG----------------------------------------CTG----------------CG--TGT-------GAGTGTACGGGCCATTTGCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTTCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................GTCGAGCGAGGAGATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................3116.00600000000006
.......................................................................GAGGAGATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
.....................................................GTGG-AACCATGTCGAGCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................................................G-AACCATGTCGAGCGAGGAGATGCTATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..........................................................................GAGATGCTATACGCGCAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................G-AACCATGTCGAGCGAGGAGATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................A-------------------------GCTAGTGG-AACCATGTCGAGCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
droEug1
GGG----------------GAGGA-------------------------GCAAGTGG-AACCATGTCTAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGTGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCT--GCCCAAA----------------------------------------GTATTTGTTTG------------TGT-------GTGTGTGTGGGCCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCGATTSizeHit CountTotal NormTotal
No Reads
droBia1
GAGT-------AG------AAGGA-------------------------GCCAGTGG-AACCATGTCGAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GAGATTTT----------------------------------------------------G------TGTGTG----TGTT--CGT-------GAGTGTGCGGGCCACTCTCCAGGT-A----T------------------------------------------------TGGCCCTGATTTGTTCCCATGACAGGTGAT--TAGCTATTSizeHit CountTotal NormTotal
No Reads
droTak1
GAG----------------GAGGA-------------------------GCAAGTGG-AACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAG------TA---TATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCC--------------------------------------------------GTG------TGTG----TGCG--TGT-------GTCTGTGTGGGCCATTCTCCAGGT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotal
No Reads
droEle1
GAGGCAGTGGTGGAC----GAGGA-------------------------GCAAGTGG-AACTATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----TTACACAG------TATAATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCTTGGTCAAT----------------------------------------GTG------TGTG----TG---------------TGTGTGAGTGCCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotal
No Reads
droRho1
GAT----------------TAGGA-------------------------GCAAGTGG-AACGATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----ATACACAG------TATAATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTCCCCT-GGTCAAA----------------------------------------GTG------TGTG----TGTG--T---------GTGTCTGTGGGCCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTCCCATGGCAGGTGAT--TAGCCATTSizeHit CountTotal NormTotal
No Reads
droFic1
GAC----------------GAGGCC------------------------GCAAGTGTAAACCATGTCGAGCGAGGAGATGCTATATGCGCAGGTA-----T-ACACAG------TAT-ATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGT----------------CTGCA-------------------------AATGGTGCCAA------------TATAAAATTGCACCCATAAC-GTGATTTTCCCCTGGCCAAA----------------------------------------GTA------TGCG----TGCCTGTGT-------AGGTGTGTTGGTCATTTTCCAGTT-C----T------------------------------------------------TGGCCCTGATTTGTTTCCATGACAAGTGAT--TACCCACTSizeHit CountTotal NormTotal
No Reads
droKik1
AAG----------------GAGGC-------------------------GCAGCGGG-AAAAATGTCAAGCGAGGAGATGCTATACGCGCAGGTA-----TTACACGTCCATCGTTGGATATATT-------GATGCCCCACAAGTGCATCGT-GGCAGATTGCGG--CGGCG--GGT------------------GTCGG------TGTCG--------------------CT-------------------------GACGGTGCCAA------------TATAAAA-TGCAACAATAACCGTGATTCC-GCG-----------TGC-----------------------TT---------G------TGTTTG----TGTT--G---AGGCATGTGTGTGTGTGCCATTTGCC-GTT-C----TTCGCGTTCTCCC--CC---TTCCA------GT--TTCCATTGCT----CAGCCCTGATTTCTTCCC-------------------ATTSizeHit CountTotal NormTotal
No Reads
droAna3
GGA----------------GAAGG-------------------------CCAGGAGA-AACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAA--TGATATATTGCT-GCTGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGC----GCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAA-ATTGCACCCATAGC-GTGATTTCTGT-----CGGT---------------------------------GT---ACGTG----T--TGT----TGTG--G---------GTGTATGTGGGCTG------------------------------------------------------------------------------------TGAC--------------AGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................G------------------------------TGTCGC----GCTCTTGGACGCCA............................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................T----TGTG--G---------GTGTATGTGGGCT..........................................................................................................1911.001100000
.............................................................CATGTCGAGCGAGGAGATGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
GAG----------------GAG----------------------------------A-AACCATGTCGAGCGAGGAGATGTTGTACGCGCAGGTA-----TTCCACATCTTTAA--TGATATATTGCT-GCGGATGCCCCACAAGTGCATCGTTGGCAGATTGCGG--CGGTGTCGG------------------------------TGTCGC----GCTCTTGGACGCCAGC--------------------------AATGGTGCCAA------------TATAAAG-TGCACCCATAGC-GTGATTGGTGT-----CGGT---------------------------------GT---ACGTG----T--TAT----TGTG--G---------GTGTATGAG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
-AG----------------GAGAA-------------------------CGTAACGG-AACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCAC------AT---TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGTGTCGGT------------------GTCGGTATC------------GCTTTAGG----ACGCC-------------------------AATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACT----------------------------------------GTT------TGCGTGTGTGT----GTGCT-CTCGTGTGTTTGCGCCATTTTCG---TTT----TTCACATT-TCTT--CA---TTCTACAAGCAGTGTG-TTCTTGCTCTATTAGCCC-------TTTCCATGGCAGGTGATGACAGGTATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................ATAAC-GTGAATTCTGCTCTGC....................................................................................................................................................................................................2112.0020200000000
.........................................................................................................................................................TGGCAAATTGCGG--CGGTGTT....................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TT----TTCACATT-TCTT--CA---TTCT.................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------TTTCCATGGCAGGTGAT..........1911.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCC-------TTTCCATGGCAGGTGA...........2011.0010100000000
......................................................................................................................................................................................................................................................................AGTGCCAAGAATGGGGGGCT.........................................................................................................................................................................................................................................2011.0010000001000
......................................................................CGAGGAGATGCTATATGCAAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAGTGTG-TTCTTGCT............................................2011.0010100000000
.......................A-------------------------CGTAACGG-AACCATGTCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
....................................................................................................................................................................................................................................................................................................................TTCTGCTCTGCTACT----------------------------------------GTT------TGC............................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................AAAAATGCATACATAAC-GTG.................................................................................................................................................................................................................2011.0010100000000
.....................GAA-------------------------CGTAACGG-AACCATGTCAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................TAGTGCCAAGAATGGGGGGCTA........................................................................................................................................................................................................................................2211.0010000001000
.......................................................................GAGGAGATGCTATATGCAAAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................T------------------GTCGGTATC------------GCTTTAGG----ACG...........................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................TGTCGGT------------------GTCGGTATC------------GCTT......................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................AGCGAGGAGATGCTATATGCAAAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................TACT----------------------------------------GTT------TGCGTGTGTGT----G...............................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................CTACT----------------------------------------GTT------TGCGTGTGTGT----GT..............................................................................................................................2111.0010001000000
..............................................................................................A-----TTCCGCAC------AT---TATATT-------GAT............................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................TGGCAAATTGCGG--CGGTGTCG...................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................GTCGGT------------------GTCGGTATC------------GCTTTAGG----ACGCC-------------------------................................................................................................................................................................................................................................................................2811.0010100000000
.............................................................................................................................................................................................................................................................................................................C-GTGAATTCTGCTCTGCTAC.................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................GTGCCAAGAATGGGGGGCTAT.......................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................TATT-------GATGCCCTACAAGTGCA..............................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GAG----------------GAGAA-------------------------CGTAACGG-AACCATGTCAAGCGAGGAGATGCTATATGCAAAGGTA-----TTCCGCAC------AT---TATATT-------GATGCCCTACAAGTGCATTGTTGGCAAATTGCGG--CGGTGTCGGT------------------GTCGGTATC------------GCTTTAGG----ACGCC-------------------------AATAGTGCCAAGAATGGGGGGCTAATAAAAATGCATACATAAC-GTGAATTCTGCTCTGCTACT----------------------------------------GTT------TGCGTGTGTGT----GTGCT-CTCGTGTGTTTGCGCCATTTTCG---TTT----TTCACATT-TCTT--CA---TTCTACAAGCAGTGTG-TTCTTGCTCTATTAGCCC-------TTTCCATGGCAGGTGATGACAGGTATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................AGAA-------------------------CGTAACGG-AACCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
.........................................................................................................................................................................................................TATC------------GCTTTAGG----ACGCC-------------------------AATAA...........................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................GT----GTGCT-CTCGTGTGTTTGCG............................................................................................................2111.001000001
.....................GAA-------------------------CGTAACGG-AACCATGTCAAGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......................................................................................................................................................GTTGGCAAATTGCGG--CGGTG......................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................................................................GAGGAGATGCTATATGCAAAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
.....................................................................................................................................................................................................TCGGTATC------------GCTTTAGG----ACGCC-------------------------................................................................................................................................................................................................................................................................2111.001010000
GAG----------------GAGAA-------------------------CGTAACGG-AAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........................................................................................................................................................................GTGTCGGT------------------GTCGGTATC------------GCT.......................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
AGT----------------GGACC-------------------------ATCATCAT-CATCATGTCTAGCGAGGAGATATTATATGCTAAGGTA-----TTTGGCCCTTATAATA---ATTATTATTATCGGATGCCATACAAGTGCATTGTTGGCAAGAAGAGT--CAGTC-AGATGTTGTTTGCTTGGTTGGTGGGAGAATGGAGGGCGC----------------CCGCC-------------------------AATAGTGTTAA------------AAGCGGGTCTCATTCTCTCA-GCGTTTATGTGTTTGTCTGT----------------------------------------GTG--------TG----TGTA--TGT-------GTGCGTGCGTG------------------------------------------------------------------------TTTGACAGGTTGCCAAGACAGAAGAT----------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................GATATTATATGCTAAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................1922.50540010
.......................................................................GAGGAGATATTATATGCTAAGGGC-----...............................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200110
...........................................................................AGATATTATATGCTAAGGTA-----T..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.......................C-------------------------ATCATCAT-CATCATGTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000
droVir3
TCG----------------GACAG-------------------------G---CTGT-AATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACA--TTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGTTGGCA-ATTCC-G--CGCTGTTGTC------------------GT---------C---GTCGTCGA-----------------------------GCCCAGCGCTCCATAGTGTTAAGAATTGG-GGCTTATAAAAACGCATACATAAT-AACAATA--------ACAACGTGTGCTGCATGCATACGAGTGCATGTGCATGCGT---ATGTG----T--GTG----TGTG--T---------GTGTGTGTGTG------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................AGATGCTATACGCAAAGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................................................AATCATGTCAAGCGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
....................................................................AGCGAGGAGATGCTATACGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
................................................................GTCAAGCGAGGAGATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................GCGAGGAGATGCTATACGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
TCG----------------GACAG-------------------------G---CTGT-AATCATGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................CATGCGT---ATGTG----T--GTG----TGTG--T---------.......................................................................................................................2190.111000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GT---ATGTG----T--GTG----TGTG--T---------GTGTGTGT...............................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
CAC----------------GACACTGCGGCTGCCGTTGCTGGTGCTGCTGCTGCTGC-AATCATGTCAAGCGAGGAGATGCTATACGCAAAGGTACACATTTACACAT-----------TATATT-------GATGCCCCACAAGTGCATTGT-TGGCAATTGCG---CGCTGTTGTC------------------GT---------C---GTCGTCG-TCGTCGTCGTCAGCTA-------------GCC-------TCATAGTGTTAAGAATGGGAGGCTTATAAAAACGCATACATAAT-AACAATA--------ACAACGTGCGATGCATGCATG--------T--------GTGCTCTGTG------TGTG----TGTG--T---------GTGTATGTGCGCCCATTTCA---TTTCGCTTTTGCATT-TCCTATTCGTTTCTTGCA-----------------------AGT------T------TCTTCCAGGTCAA--CCCTAATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................CTGGTGCTGCTGCTGCTGC-AATCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................GTCAAGCGAGGAGATGCTATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
ACGG-------AGAAAAACAGCA----------------------------CGCTGC-AATCATGTCAAGCGAGGAGATGTTATACGCAAAGGTACA---TTACACAT------TA---TATATT-------GATGCCCCACAAGTGCATTGT-TGGCAATTGCTGCGCGCTGTCGT------------------------------CGTCGTCGTCGT-TGTTGTCG----CTGGCGTTTTACCTTTGCCAAGCGGCCAATAGTGTTAAGAATGGGGGGCTTATAAAAACGCATACATAAT-AACAATA--------ACAACGTGCACTGTATATATA--------TATATATATAT---ATGTG----TGTGTG----TGTG--TGT-------GTGTTTGTGCGCCAATTTCA---T-T----T------------------------------------------------TTGCATTTCTTTAATGTCTTGCAAGCTGCT--TGTGTCTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................GTG----TGTG--TGT-------GTGTTTGTG..............................................................................................................19200.05101

Generated: 05/18/2015 at 10:27 PM