ID:

dsi_19651

 Coordinate:

x:12158199-12158461 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.3 -33.2 -33.2

Flybase annnotation

exon [x_12158462_12158706_-]; CDS [x_12158462_12158706_-]; CDS [x_12157854_12158198_-]; exon [x_12157475_12158198_-]; intron [x_12158199_12158461_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGAGCACAAATACCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTACATACCCAACCCCAATTTTGGCGCCAAAAATCACAGGAGCTAATTGGCCACCATATCGTCGCAATTAGATTGGCTTTCGTGTTGATAAGGCACTGGGCGACACTGCCAGGGCTAATTAACACAAAATGTCACTCACTTATAGGCCATATATTGTTAAACAATGGGTTTTAGTTAAGGATCATATTCGTATGATGGCAGAACTTAAGCGTAGAAGTAATGGTTGAGGTATCTTCTTACAACTCACAACTTTTCCGTTGCAGAGCGAGAAACACATGGCGGTGGACAATCTGCGCGAGGAGTTCATGGAGCG
***********************************************************************************************************************.((.(((((((.((((((((..(((.((.((((....)))).))))).)))))))).))).)))).))..............((((((...)))))).((((.((((....((((((....)))))).....)))).)))).****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 O001
Testis
 O002
Head
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
.........................................................................................................................................................................................................................................................................................................TACTTTTCCGTTGCAGAGCATGAA.......................................... 24 3 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
......AAAAATACCAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........AAATAACAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 20 3 5 1.20 6 1 5 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGCCGACACTGCCAGGGCTAA................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GAGAGCAAGAAACACATGGCGGGGGA........................... 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................AGATTGGCTTTCGTGTTGAT................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........AAATACCAGTCCGACGATC................................................................................................................................................................................................................................................................................................................................................ 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TATCGTCGCAATTAGATTGGCTT.......................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........AAATACCAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TATGATGGCAGAACTTAAGCG...................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................CACAGGAGCTAATTGGCC..................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ATGGCAGAACTTAAGCGTAGAA................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........ATACCAGTCCGACGATCAA.............................................................................................................................................................................................................................................................................................................................................. 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........AAATAACAGTCCGACGATCAA.............................................................................................................................................................................................................................................................................................................................................. 21 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTCGTGTTGATAAGGGACT........................................................................................................................................................................................................................ 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................CACAGGAGCTCATTGTCCACG.................................................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
.........AATAACAGTCCGACGATCAA.............................................................................................................................................................................................................................................................................................................................................. 20 3 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0
......ACAAATAACAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......AAAATACCAGTCCGACGATC................................................................................................................................................................................................................................................................................................................................................ 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........ATAACAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0 0
........AACTACCAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AGTATCACTCGCTTATAGG....................................................................................................................................................................... 19 3 10 0.20 2 0 0 0 0 0 0 0 0 0 0 2 0
........AAATACAAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CAATTAGATTGGCATTTGTGAT................................................................................................................................................................................................................................... 22 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TAATTTAAACAAGATGTCACT................................................................................................................................................................................. 21 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GACATTGCCAGGGCT..................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
.......CAGATACCAGTCAGAGGA.................................................................................................................................................................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
..........ATACCAGTCCGACGATC................................................................................................................................................................................................................................................................................................................................................ 17 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
..........ATAACAGTCCGACGATCAA.............................................................................................................................................................................................................................................................................................................................................. 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
...........TACCAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 17 2 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
.........AATAACAGTCCGACGATCA............................................................................................................................................................................................................................................................................................................................................... 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GCTAATTAACACAAAAAA...................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GCGCTACACTGACAGGGC...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
........AAATACAAGTCCGACGATC................................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGCTCGTGTTTATGGTCAGGCTCCTTGTTCGCCGGCAGGTCGTGAAACTCCATGTATGGGTTGGGGTTAAAACCGCGGTTTTTAGTGTCCTCGATTAACCGGTGGTATAGCAGCGTTAATCTAACCGAAAGCACAACTATTCCGTGACCCGCTGTGACGGTCCCGATTAATTGTGTTTTACAGTGAGTGAATATCCGGTATATAACAATTTGTTACCCAAAATCAATTCCTAGTATAAGCATACTACCGTCTTGAATTCGCATCTTCATTACCAACTCCATAGAAGAATGTTGAGTGTTGAAAAGGCAACGTCTCGCTCTTTGTGTACCGCCACCTGTTAGACGCGCTCCTCAAGTACCTCGC
******************************************************************************************************.((.(((((((.((((((((..(((.((.((((....)))).))))).)))))))).))).)))).))..............((((((...)))))).((((.((((....((((((....)))))).....)))).)))).*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR902009
testis
............................................AAACTCCATGTAGGGG............................................................................................................................................................................................................................................................................................................... 16 1 4 1.50 6 0 4 2 0 0 0 0
........................................................................................................................................................CGTGACGGTCCCGATTAATTG.............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................ATGTTGAGTGTTGAA............................................................. 15 0 2 1.00 2 2 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TTGAGTGTTGAAAAGGCAACG.................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................AAACTCGATGTATGGG............................................................................................................................................................................................................................................................................................................... 16 1 4 0.75 3 0 1 2 0 0 0 0
.............................CCCCGGCAGGTCGTG............................................................................................................................................................................................................................................................................................................................... 15 1 3 0.67 2 2 0 0 0 0 0 0
............................................AGACTCCATGTATGGG............................................................................................................................................................................................................................................................................................................... 16 1 2 0.50 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................GAAAAGGCAACGTCT................................................. 15 0 3 0.33 1 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................................CTCGCTCTTAGAGTACCG................................. 18 2 4 0.25 1 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................................................................................AGAAAAGGCAACGTCT................................................. 16 1 8 0.25 2 2 0 0 0 0 0 0
....................................................................................................................................................CCGCTATGACGGTCC........................................................................................................................................................................................................ 15 1 4 0.25 1 1 0 0 0 0 0 0
..................................................................................TAGTGCCGTCGATTACCCGG..................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0
.............................................GACTCCATGTCTGGG............................................................................................................................................................................................................................................................................................................... 15 2 20 0.20 4 0 0 4 0 0 0 0
............................................ACACTCCATGTAGGGG............................................................................................................................................................................................................................................................................................................... 16 2 20 0.15 3 0 2 1 0 0 0 0
............................................................................................................................................................................................................................................................................................AGAATGGTTACTGTTGAAAAGG......................................................... 22 3 7 0.14 1 0 1 0 0 0 0 0
.............................................AACTCCATGTAGGGG............................................................................................................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 1 0 0 0 0
.............................AGCCTGCAGGTCGTGGAAC........................................................................................................................................................................................................................................................................................................................... 19 3 16 0.13 2 0 0 0 0 0 0 2
..............................................................................................................................................................................................................................................................................................................................................CTGTTAGACGCGGCCCTCTAGT....... 22 3 12 0.08 1 1 0 0 0 0 0 0
.........................................................................................................................................................................ATTGTGTTTGACAGT................................................................................................................................................................................... 15 1 15 0.07 1 1 0 0 0 0 0 0
.....................................................................................TGTACTCGATTACCCGG..................................................................................................................................................................................................................................................................... 17 2 16 0.06 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AAATGTTGAGTCTTGAA............................................................. 17 2 20 0.05 1 0 0 0 0 1 0 0
.............................................CACTCGATGTATGGG............................................................................................................................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 1 0 0 0 0
...........................................GAAACTCGATGTAGGGG............................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0
.........................................GGCAAACTCCATGTAGGGG............................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0
............................................ACACTCGATGTATGGG............................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................GAAGAATGTTGGGAGT................................................................. 16 2 20 0.05 1 1 0 0 0 0 0 0
..................................GCAGGTCGGGAAAGTC......................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:12158149-12158511 - dsi_19651 TCGAGCACAAATACCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTACATACCC-AAC-CC------CAATTTTGGCGCCAAAAATC-A-CAGGAGCTA-ATTGGCCACCA---TA--TCGTCGCAATTAGATTGGCTTTCGTGTT-GATAAGGCACTGGG---CGACACTGCCAGGGCTAATT--AACACAAAATGTCACTCACTTATAGGCCATATA-TTGTTAAACAATG--------------------------------------------------GGTTTTA-----GTTAAGG---ATCATATTCGTATGATGGCAGAACT------TAAGCGTAGAAGTAATGGTTGAGGTATC---------------TTCTTACAACTCACAACTTTTCCGTTGCAGAGCGAGAAACACATGGCGGTGGACAATCTGCGCGAGGAGTTCATGGAGCG
dm3 chrX:12802672-12803018 - TCGAGCACAAATACCAGTCCGAGGAACAAGCTGCCGTCCAGCACTTTGAGGTACATAACCAATC-TC------GATTTTTGGCGCCAAAAATG-A-GAAGAGCTA-ATTGGCCACCA---TA--TCGTCGCAATTAGATTGGCTTTCGTGTT-GATAAGGCACTGGG-GGCGACACTGCCAAAGCTAATTACAACACAAAATGTCACTCACTTATAGGCCATATA-T----------------------------------------------------------------------------TAACG---ATTTAAGACAAATGATGGCTTAACT------TAAGCGTAGAAGTAGTTGTTAATGTATC---------------CTCTTGCAACTCACAACTTTTCCGTTGCAGAGCGAGAAACACATGGCATTGGACAATCTGCGCGAGGAGTTCATGGAGCG
droEre2 scaffold_4690:14051155-14051498 + TCGAGCACAAATTCCAGTCCGAGGAACAGGCGGCCGTCCAGCACTTTGAGGTACACACA--CTACCT------GCTTTTTGGCGCCAAAAATC-A-CAAGAGCTA-ATTGGTCATTG---TG--TCGTCGCAATCAA-------------TT-GATAAGCAACTGGGGGGAGGCACTGCCAGGGTTAATT--AACACAACATATCACA------------------------AACAATA--------------------------------------------------GTTCTAA-----GTTAACG---ATACCATTCGAATTATGGCAAAG-T------TAAGAGTGGAAGTAGTAGGAATATTATCGCAGCCATGTTGATATTCACTTCACTTACAACTGTTCCGTTGCAGAGCGAGAAGTACATGGCGGTGGACAACCTGCGCGAGGAGTTCGTGGACCG
droYak3 X:7077997-7078366 - TTGAGCACAAATTCCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTGAGCACA--CTCCCA------GCTTTTTGGCGCCAAAAATC-A-CAAGAGCTT-ATTGGCCATTA---TATGTCGTCACAATCAGTTTATGCTTTGCGTT-GATAAGAAACTGGG---CGCCACTGCCAGGGTTAATT--AACACAAAATAGCACACATTTATGGGGCATTTA-TTGGTAAACAATA--------------------------------------------------GTTTTCC-----GTTAACG---ATATCATTCAAATTATGGCAGAG-TTCTTTTGAAACGTAGAAGTAGTAGCAATGTTATC---------------TTCACTTCACTAACAACTACTTCGTTGCAGAGCGAGAAACACATGGCGGTGGACAACCTGCGCGAGGAGTTCGTGGAGCG
droEug1 scf7180000409110:1231851-1232204 - TCGAACACAAGTTCCAGTCAGAGGAACAAGCGGCCGTCCAACACTTTGAGGTAAGCACA--CACCCACACATTGCCTTTTCGCGCCAAAAAATTG-CAAGGGCAA-ATTGGAGATAATAATG--TGGTGACAATCAGATTAGATCTCATGTC-GATAAGGAACTTGA---T-TAATT-TACGTGTTGAAT--TAAACGA--AATGTTAGATTT-----------------AAAAAAACTGCAAGGGCTTCGCCATTATACATAGTTAGCCCGACCCATTTATAAGAATAA-TCCCCATCCGAGTAA-GAATAAATGAATAACAAT----------------------------------------------------------------------------CTAACCCATTACAGAGCGAGAAACATATGGCATTGGACAACCTGCGCGATGAGTTCTTAGAGCG
droBia1 scf7180000298389:452865-453052 - TCGAGCACAAGTTCCAGTCCGAGGAGCAGGCGGCCGTCCAGCACTTTGAGGTACGCCC---ACC-GC------GCTTTTTGGCGCCAAAAATGGG-CCTCGGCAG-TTTGGCCATTT---TG--CTGATGGAATCTGATTAGCTTTCCGGGC-GATAAGGGAGAGG----TGTAACC-CTAGTGCCTGTT--TACACAGAACATGGCTGATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415192:131256-131396 + TCGAGCACAAGTTCCAGTCCGAGGAGCAGGCCGCCGTCCAGCACTTTGAGGTACTTTC----T--AC------GCTTTTTGGCGCCAAAATGT-GGGAGGGTCTACAGAGGCGATTA---TT--GGATTGCCATTGGATGGGTTTCCATGTC-TATGGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490546:1099621-1099747 + TCGAGCACAAGTACCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTACACTC----A--AC------GCTTTTTGGCGCCAAAAAAT-G-CAAGGCCAA-CTTGGTGATTA---TA--TTATCGCAATCAGATTAGCTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779914:640591-640867 + TCGAGCACAAGTTCCAATCCGAGGAACAAGCTGCAGTCCAGCACTTTGAGGTACACAC----T--GC------CTATTTTGGCGCCAAAAATG-G-CAAGGGAAT-ATTGGCGATTA---CA--TTATCACAATCAGATTAGCTTTTACCTCCGATAGGGGACTTGG---TGTAACTCAAGGGGTTAATA--TTCTCA-AACATTACACACTTAGAGGGCATTTAGTTGTTAAATAACT--------------------------------------------------ATTACTAATACCATCAA-G---AGATTAATGAAAATATGCCAAAT-TAAACTTTAATGATTGAAGTAT------------C-----------------------------------------------------------------------------------------------
droFic1 scf7180000454050:727060-727205 - TCGAGCACAAGTTCCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTATACAC----C--CT------GTTTTTTGGCGCCAAAAATT-G-CAATACCGA-ATTGGCGCTTT---TA--ATACCCCAATTAGATAAGTTTTATTGTT-TGTGAGGTATTTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302517:54431-54511 + TCGAGCACAAGTTCCTGTCCGAGGAGCAGGCAGCCGTCCAACACTTTGAGGTAAGTCCC--GTG-GC------GTTTTTTGGCGCCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:3737024-3737093 - TCGAGCACAAGTTCCTCTCCGAGGAGCAGGCAGCCGTACAGCACTTCGAGGTATG---------------------TTTTGGCGCCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396499:162542-162610 - TCGAGCACAAGTTCCTCTCCGAGGAGCAAGCAGCCGTACAGCACTTTGAGGTATG---------------------TTTTGGCGCCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3a:1627907-1627989 + TCGAACACAAGTTCCTGTCCGAGGAGCAGGCATGCGTCCAGCACTTGGAGGTAATTCG---ATA-CC------ATATTTTCCCGCCAAAAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_52:189584-189666 - TCGAACACAAGTTCCTGTCCGAGGAGCAGGCATGCGTCCAGCACTTGGAGGTAATTCG---ATA-CC------ATATTTTCCCGCCAAAAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:4948270-4948343 - TCGAGCATAAATATTTATCCGAGGAACAAGCGGCAGTGCAACATTTTGAGGTAAT----------AC------GCAATTTGGCGCCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12928:4523486-4523553 + CATTTTTTGCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCAGAGCGAGAAACAAATGGCGGCGGATAATTTGCGCGAGGATCTAATGGAGCG
droMoj3 scaffold_6328:108449-108503 - TGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGCGAGAAACAAATGGCCATAGATAGTCTGCGCGAGGATCTAATGGAGCG
droGri2 scaffold_15081:2712186-2712246 - TTCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAGAGCGAGAAACAAATGGCTGTGGATAATCTGCGCGAGGAGCTAATGGAGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCGAGCACAAATACCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTACATACCC-AAC-CC------CAATTTTGGCGCCAAAAATC-A-CAGGAGCTA-ATTGGCCACCA---TA--TCGTCGCAATTAGATTGGCTTTCGTGTT-GATAAGGCACTGGG---CGACACTGCCAGGGCTAATT--AACACAAAATGTCACTCACTTATAGGCCATATA-TTGTTAAACAATG--------------------------------------------------GGTTTTA-----GTTAAGG---ATCATATTCGTATGATGGCAGAACT------TAAGCGTAGAAGTAATGGTTGAGGTATC---------------TTCTTACAACTCACAACTTTTCCGTTGCAGAGCGAGAAACACATGGCGGTGGACAATCTGCGCGAGGAGTTCATGGAGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................AGATTGGCTTTCGTGTT-GAT.....................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
........................................................................................................................TA--TCGTCGCAATTAGATTGGCTT................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................TATGATGGCAGAACT------TAAGCG.....................................................................................................................2111.00100000000010000000
............................................................................................C-A-CAGGAGCTA-ATTGGCC................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.....................................................................................................................................................................................................................................................................................................................................ATGGCAGAACT------TAAGCGTAGAA................................................................................................................2211.00100000000000010000
.......................................................................................................................................................................................GCTAATT--AACACAAAAAA......................................................................................................................................................................................................................................................................18200.05100000000000001000
dm3
TCGAGCACAAATACCAGTCCGAGGAACAAGCTGCCGTCCAGCACTTTGAGGTACATAACCAATC-TC------GATTTTTGGCGCCAAAAATG-A-GAAGAGCTA-ATTGGCCACCA---TA--TCGTCGCAATTAGATTGGCTTTCGTGTT-GATAAGGCACTGGG-GGCGACACTGCCAAAGCTAATTACAACACAAAATGTCACTCACTTATAGGCCATATA-T----------------------------------------------------------------------------TAACG---ATTTAAGACAAATGATGGCTTAACT------TAAGCGTAGAAGTAGTTGTTAATGTATC---------------CTCTTGCAACTCACAACTTTTCCGTTGCAGAGCGAGAAACACATGGCATTGGACAATCTGCGCGAGGAGTTCATGGAGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................A-T----------------------------------------------------------------------------TAACG---ATTTAAGACAT...............................................................................................................................................18115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210002300000030000000000000000000000000000000000000
................................................................................................................................................................................................................................A-T----------------------------------------------------------------------------TAACG---ATTTAAGACAAA..............................................................................................................................................19113.00130000000000000000000000000000000000000000000000000000000005620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAATCTGCGCGAGGAGTTC........25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGAGGTACATAACCAATC-TC------........................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAGCACAAATACCAGTCCGAGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................A-T----------------------------------------------------------------------------TAACG---ATTTAAGACAA...............................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGTCCGAGGAACAAGCTGCCGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACAATCTGCGCGAGGAGT..........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................A-T----------------------------------------------------------------------------TAACG---ATTTAAGACAG...............................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000
......................................CAGCACTTTGAGGTACATAAC......................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCGAGGAGTTCATGGAG..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACAATCTGCGCGAGGAGT..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTGGCCACCA---TA--TCGTCGCAA............................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AAGCGTAGAAGTAGTTGTTT......................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCGCGAGGAGTTCATGG....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGACAATCTGCGCGAGGA............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GCTA-ATTGGCCACCA---TA--TCGT.................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCGAGGAGTTCATGGAGCG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAAATGTCACTCACTTATAGG.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATTGGACAATCTGCGCGAG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCATTGGACAATCTGCGCGAG..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ATGATGGCTTAACT------TAAGCGT....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGCATTGGACAATCTG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................TCCGAGGAACAAGCTGCCGTCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................ACT------TAAGCGTAGAAGTAGTTG.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTATC---------------CTCTTGCAACTCAC..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CTGCCGTCCAGCACTTTGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCATTGGACAATCTGCG..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCGTTGCAGAGCGAGAA..........................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGGAGTTCATGGAGC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................A-ATTGGCCACCA---TA--TCGTCGC..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AACACATGGCATTGGACA.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACACATGGCATTGGACAATCTGCGC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGCATTGGACAATCTGCGCGA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GCACTGGG-GGCGACACTGC..............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAATACCAGTCCGAGGAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGGCTTAACT------TAAGCGTAGA.................................................................................................................2011.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCTGCGCGAGGAGTTCAT......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGCGCGAGGAGTTCA.......1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCGCGAGGAGTTCATGGA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............AGTCCGAGGAACAAGCTGCCGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGAACAAGCTGCCGTCCAGCACTTTGA................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TAAGCGTAGAAGTAGTTGTTA......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AGTAGTTGTTAATGTATC---------------CTC.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGACAATCTGCGCGAGGAGT..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GAAGTAGTTGTTAATGTATC---------------................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........AATACCAGTCCGAGGAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................TAGATTGGCTTTCGTGTT-GAT.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGAAACACATGGCATTGGA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCTGCGCGAGGAGTTCATGGA...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCACAAATACCAGTCCGAGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AGAAGTAGTTGTTAATGTATC---------------................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCTGCGCGAGGAGT..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............CCAGTCCGAGGAACAAGCTGCCGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGGCATTGGACAATCTGCGC.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GCCAAAAATG-A-GAAGAGCTA-ATTG...................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................G---ATTTAAGACAAATGATGGCT......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGACAATCTGCGCGAGG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CAACTTTTCCGTTGCAGAGCGAA............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGGAACAAGCTGCCGTCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........AATACCAGTCCGAGGAACAAGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................A-T----------------------------------------------------------------------------TAACG---ATTTAAGACGG...............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACACATGGCATTGGACAATCTGCG..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................TTTCGTGTT-GATAAGGCACT.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................GTCCGAGGAACAAGCTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAATCTGCGCGAGGA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TACATAACCAATC-TC------GATTTTTGGCG.............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGCATTGGACAATCTGCGCGAG..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATTGGACAATCTGCGCGAGG.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCGAGGAGTTCATGGAGC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATTGGACAATCTGCGCGAGGA............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTACATAACCAATC-TC------GATTTTTGGCGC............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CACAAATACCAGTCCGAGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACATAACCAATC-TC------GATTTTTT................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCGAGCACAAATTCCAGTCCGAGGAACAGGCGGCCGTCCAGCACTTTGAGGTACACACA--CTACCT------GCTTTTTGGCGCCAAAAATC-A-CAAGAGCTA-ATTGGTCATTG---TG--TCGTCGCAATCAA-------------TT-GATAAGCAACTGGGGGGAGGCACTGCCAGGGTTAATT--AACACAACATATCACA------------------------AACAATA--------------------------------------------------GTTCTAA-----GTTAACG---ATACCATTCGAATTATGGCAAAG-T------TAAGAGTGGAAGTAGTAGGAATATTATCGCAGCCATGTTGATATTCACTTCACTTACAACTGTTCCGTTGCAGAGCGAGAAGTACATGGCGGTGGACAACCTGCGCGAGGAGTTCGTGGACCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATGGCGGTGGACAACCTG....................2211.0011000000
......ACAAATTCCAGTCCGAGGAACAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...................................................................................................................TG---TG--TCGTCGCAATCAA-------------TT-GA......................................................................................................................................................................................................................................................................................................................2111.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTACATGGCGGTGGA...........................2011.0011000000
...................CGAGGAACAGGCGGCCGTCCAGCACT....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
droYak3
TTGAGCACAAATTCCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTGAGCACA--CTCCCA------GCTTTTTGGCGCCAAAAATC-A-CAAGAGCTT-ATTGGCCATTA---TATGTCGTCACAATCAGTTTATGCTTTGCGTT-GATAAGAAACTGGG---CGCCACTGCCAGGGTTAATT--AACACAAAATAGCACACATTTATGGGGCATTTA-TTGGTAAACAATA--------------------------------------------------GTTTTCC-----GTTAACG---ATATCATTCAAATTATGGCAGAG-TTCTTTTGAAACGTAGAAGTAGTAGCAATGTTATC---------------TTCACTTCACTAACAACTACTTCGTTGCAGAGCGAGAAACACATGGCGGTGGACAACCTGCGCGAGGAGTTCGTGGAGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........AATTCCAGTCCGAGGAACAAGCGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACACATGGCGGTG.............................1811.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAACCTGCGCGAGGAGTTCGTA.....2511.00100000010000
.................................................................................................................................................................................................................................................................................................................................................CTTTTGAAACGTAGAAGT..............................................................................................................1811.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACCTGCGCGAGGAGTTCGTG.....2411.00100000010000
...............AGTCCGAGGAACAAGCGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
TCGAACACAAGTTCCAGTCAGAGGAACAAGCGGCCGTCCAACACTTTGAGGTAAGCACA--CACCCACACATTGCCTTTTCGCGCCAAAAAATTG-CAAGGGCAA-ATTGGAGATAATAATG--TGGTGACAATCAGATTAGATCTCATGTC-GATAAGGAACTTGA---T-TAATT-TACGTGTTGAAT--TAAACGA--AATGTTAGATTT-----------------AAAAAAACTGCAAGGGCTTCGCCATTATACATAGTTAGCCCGACCCATTTATAAGAATAA-TCCCCATCCGAGTAA-GAATAAATGAATAACAAT----------------------------------------------------------------------------CTAACCCATTACAGAGCGAGAAACATATGGCATTGGACAACCTGCGCGATGAGTTCTTAGAGCGSizeHit CountTotal NormTotal
No Reads
droBia1
TCGAGCACAAGTTCCAGTCCGAGGAGCAGGCGGCCGTCCAGCACTTTGAGGTACGCCC---ACC-GC------GCTTTTTGGCGCCAAAAATGGG-CCTCGGCAG-TTTGGCCATTT---TG--CTGATGGAATCTGATTAGCTTTCCGGGC-GATAAGGGAGAGG----TGTAACC-CTAGTGCCTGTT--TACACAGAACATGGCTGATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCGAGCACAAGTTCCAGTCCGAGGAGCAGGCCGCCGTCCAGCACTTTGAGGTACTTTC----T--AC------GCTTTTTGGCGCCAAAATGT-GGGAGGGTCTACAGAGGCGATTA---TT--GGATTGCCATTGGATGGGTTTCCATGTC-TATGGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCGAGCACAAGTACCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTACACTC----A--AC------GCTTTTTGGCGCCAAAAAAT-G-CAAGGCCAA-CTTGGTGATTA---TA--TTATCGCAATCAGATTAGCTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCGAGCACAAGTTCCAATCCGAGGAACAAGCTGCAGTCCAGCACTTTGAGGTACACAC----T--GC------CTATTTTGGCGCCAAAAATG-G-CAAGGGAAT-ATTGGCGATTA---CA--TTATCACAATCAGATTAGCTTTTACCTCCGATAGGGGACTTGG---TGTAACTCAAGGGGTTAATA--TTCTCA-AACATTACACACTTAGAGGGCATTTAGTTGTTAAATAACT--------------------------------------------------ATTACTAATACCATCAA-G---AGATTAATGAAAATATGCCAAAT-TAAACTTTAATGATTGAAGTAT------------C-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCGAGCACAAGTTCCAGTCCGAGGAACAAGCGGCCGTCCAGCACTTTGAGGTATACAC----C--CT------GTTTTTTGGCGCCAAAAATT-G-CAATACCGA-ATTGGCGCTTT---TA--ATACCCCAATTAGATAAGTTTTATTGTT-TGTGAGGTATTTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCGAGCACAAGTTCCTGTCCGAGGAGCAGGCAGCCGTCCAACACTTTGAGGTAAGTCCC--GTG-GC------GTTTTTTGGCGCCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TCGAGCACAAGTTCCTCTCCGAGGAGCAGGCAGCCGTACAGCACTTCGAGGTATG---------------------TTTTGGCGCCAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TCGAGCACAAGTTCCTCTCCGAGGAGCAAGCAGCCGTACAGCACTTTGAGGTATG---------------------TTTTGGCGCCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TCGAACACAAGTTCCTGTCCGAGGAGCAGGCATGCGTCCAGCACTTGGAGGTAATTCG---ATA-CC------ATATTTTCCCGCCAAAAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................TCCGAGGAGCAGGCATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
TCGAACACAAGTTCCTGTCCGAGGAGCAGGCATGCGTCCAGCACTTGGAGGTAATTCG---ATA-CC------ATATTTTCCCGCCAAAAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TCGAGCATAAATATTTATCCGAGGAACAAGCGGCAGTGCAACATTTTGAGGTAAT----------AC------GCAATTTGGCGCCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........ATATTTATCCGAGGAACAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................ATCCGAGGAACAAGCGGCAGTGCAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................GAACAAGCGGCAGTGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
CATTTTTTGCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCAGAGCGAGAAACAAATGGCGGCGGATAATTTGCGCGAGGATCTAATGGAGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGGATAATTTGCGC.................1811.001000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGCGGCGGATAATTTGCC..................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAATGGCGGCGGATAATT......................2111.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCGGCGGATAATTTGC...................2011.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGCGAGAAACAAATGGCCATAGATAGTCTGCGCGAGGATCTAATGGAGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTCTGCGCGAGGATCTA........2011.001100000
droGri2
TTCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAGAGCGAGAAACAAATGGCTGTGGATAATCTGCGCGAGGAGCTAATGGAGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:08 PM