ID:

dsi_19621

 Coordinate:

2r:8452998-8453149 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.7 -40.4 -40.3

Flybase annnotation

exon [2r_8453150_8453624_+]; CDS [2r_8453150_8453437_+]; exon [2r_8452864_8452997_+]; CDS [2r_8452864_8452997_+]; intron [2r_8452998_8453149_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAGTAGTACTTGCCTTGGTGGCAAGATAGCTGTGTAGAAAAGCAGGTCGGTCCCGGTGAGACCCTGCATGGAAATACGTAACGTCGGGTGTAACCCAGACCAATCTGCACCAACTGAATCCTAAATTGATTGCTCTCCATTTCTTTTTAGGAGGAGGGTCGCGAGGCGGAGGCCACTTCGCCGTCGGAGAACACTAGATT
**************************************************...(((.((.((((((.....)))))))).)))..........((((((.((((..(((...((((.(((((......)))...)).))))...)))..)))).))))))............(((((..((............))..)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 GSM343915
embryo
 M024
male body		 M025
embryo
 SRR553488
RT_0-2 hours eggs
...........GTCTCCTCCGAGGGTGAGAAGCAGGC....................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................AACGTCGGGTGTAACCCAG...................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................CGTAACGTCGGGTCGAAC.......................................................................................................... 18 2 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................CGCCGTCGGAGAACACTAGAT. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGAGGCCACTTCGCCGTCGGA............ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................TTGCAAGAGAGCTGTGTAGAG................................................................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................GAGAAGCAGGCCATGGGCGTTG............................................................................................................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................TTGGTGGAAATATAGCTGTG...................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 1 0 0 0
............................................................CTTGCCTTGATCGCAAGAT............................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GGAGGATGGTCGCAAGGC................................. 18 2 3 0.33 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................GTAAGGTCGGGTCTAAC.......................................................................................................... 17 2 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................TGTAGAACAGCAGGTCGGGC.................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................AGGCCACGACGCCGTCGG............. 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................GGAGTATGGTCGCTAGGC................................. 18 3 20 0.15 3 0 1 0 0 0 0 2 0 0
...........................................................................................................GTTAGACCCTGCTTGGA................................................................................................................................ 17 2 9 0.11 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GCCTGTTCGCCGTCGGA............ 17 2 11 0.09 1 0 0 0 1 0 0 0 0 0
............................................................................GATAGCTGTGTCGATAA............................................................................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................GGGAGGATGGTCGCAAGGC................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................AACGTCGGGAGTAAC.......................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GAGTAGGAGGGTCGCG..................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CTCGGCTGCCGCAGAGGAGGCTCCCACTCTTCGTCCGCCACCCACAACTCCATTCATCATGAACGGAACCACCGTTCTATCGACACATCTTTTCGTCCAGCCAGGGCCACTCTGGGACGTACCTTTATGCATTGCAGCCCACATTGGGTCTGGTTAGACGTGGTTGACTTAGGATTTAACTAACGAGAGGTAAAGAAAAATCCTCCTCCCAGCGCTCCGCCTCCGGTGAAGCGGCAGCCTCTTGTGATCTAA
**************************************************...(((.((.((((((.....)))))))).)))..........((((((.((((..(((...((((.(((((......)))...)).))))...)))..)))).))))))............(((((..((............))..)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
...........................................................................................................................................................................................AGGCAATGAAAAATCCTC............................................... 18 2 6 61.17 367 248 93 23 0 0 0 2 0 1
...........................................................................................................................................................................................AGGCAATGAAAAATCCTCC.............................................. 19 2 2 12.50 25 14 10 1 0 0 0 0 0 0
........................................................................................................................................................................................CAGAGGCAATGAAAAATCCTC............................................... 21 3 1 5.00 5 4 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAGGCAATGAAAAATCCTC............................................... 19 2 1 2.00 2 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AGGCAATGGAAAATCCTCCTC............................................ 21 3 2 1.00 2 0 0 0 0 2 0 0 0 0
........................................................................................................................................................................................GGGAGGCAATGAAAAATCCTC............................................... 21 3 2 1.00 2 2 0 0 0 0 0 0 0 0
........ACGCACAGCAGGCTCCCACTCTTCGT.......................................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................AGGCAATGAAAAATCCTCCGC............................................ 21 3 3 1.00 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGGCAAAGAAAAATCCTCC.............................................. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........CAGAGGAGGCTCCCACTCTTC............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................AGGCAATGGAAAATCCTCCT............................................. 20 3 5 0.80 4 0 0 0 0 4 0 0 0 0
...................................................................AGCACAGTTCTACCGACAC...................................................................................................................................................................... 19 3 8 0.75 6 0 0 0 0 0 6 0 0 0
.........................................................................................................................................................................................GGAGGCAATGAAAAATCCTC............................................... 20 3 7 0.71 5 1 1 3 0 0 0 0 0 0
...........................................................................................................................................................................................AGGCAATGAGAAATCCTCCTC............................................ 21 3 3 0.67 2 0 0 0 0 0 0 2 0 0
...........................................................................................................................................................................................AGGCAATGAAAAATCCTCCG............................................. 20 3 5 0.60 3 2 0 1 0 0 0 0 0 0
...................................................................AGCACAGTTCTATCGACAC...................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................GGCGGCAGCCTCTTGTGCT.... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................AGAGGTAAAGAAAAAT................................................... 16 0 4 0.50 2 0 0 0 2 0 0 0 0 0
..................................................................................................................................................CGTCTGGTTAGACGTGGT........................................................................................ 18 1 2 0.50 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................GGAGGTAATGAAAAATCC................................................. 18 2 4 0.50 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAGGCAATGAAAAATCCTCCGC............................................ 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGGCAATGAGAAATCCTCCT............................................. 20 3 5 0.40 2 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................AACGAGAGGTAAAGTAAAA.................................................... 19 1 3 0.33 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GGAGGCAATGAAAAATCCT................................................ 19 3 20 0.20 4 2 0 2 0 0 0 0 0 0
..CGGCTGCCGAAGGGGATGCT...................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................AGGCAATGGAAAATCCTCC.............................................. 19 3 11 0.18 2 0 0 0 0 2 0 0 0 0
..GGGCTGCCGCAGAGG........................................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................GGCAATGATAAATCCTCCT............................................. 19 3 6 0.17 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................GGCAATGGAAAATCCTCCTC............................................ 20 3 6 0.17 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................AGGTAATGAGAAATCCT................................................ 17 2 9 0.11 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................GGCAATGGAAAATCCTCCT............................................. 19 3 11 0.09 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................AGGCAAGGAAAAATCCTC............................................... 18 2 12 0.08 1 1 0 0 0 0 0 0 0 0
................................................................................................................TTGGACGTACCATCATGC.......................................................................................................................... 18 3 18 0.06 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................GAGGCAATGGAAAATCCT................................................ 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8452948-8453199 + dsi_19621 GAGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---ACTTGCCTTGGTGGCAAGATAGCTGTGTAG-AAAAGCAGGTCGGTCCCGGTGAGACC-----CTGCATGGAAATAC---------------G--TAACGTC-G---GGTGT------------------------------------------------------------------------------------AACCCA---------------------GACCAA-------------------------------------------------------TCTGCA--------------------------------------------------------CCAACTGAATCCTAAATTGATTGCTCTC---------------------------------------CATTTC-TTTTTAGGAGGAGGGTCGCGAGGCGGAGGCCACTTCGCCGTCGGAGAACACTAGATT
droSec2 scaffold_1:5299308-5299439 + GAGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---ACTTGCCTTGGTGGCAAGATAGCTGTGTAG-AAAAGCAGGTCGGTCCCAGTGAGACC-----CTGTATGGAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTA---
dm3 chr2R:7747519-7747869 + GAGCCGACGGCGTCTCCTCCGAGGGTGAAAAGCAGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---ACTTGCATTGGTGGCAAGATAGCTGTGGAG-AAAAGCAGGTTGGTCCCGATGAGACC-----CTGCATGGAAATACG-TTGCTTTGAATGTAATTAACCCC-ATGGGATATGATTTGTAG----TTCACCCCACTTATGGAGTGCATGGAATATTAAATACTGAAGAATGGATGTAATGTTTCTGTTGTAATCCAAACCAA---------------------GACCAA-------------------------------------------------------TCTGCA--------------------------------------------------------CCAACTGAATCCTAAATTGATTGCTCTC---------------------------------------CATTTC-TTTTTAGGAGGAGGGTCGGGAGGCGGAGGCCACTTCACCGTCGGAGAACACGCGATT
droEre2 scaffold_4845:18046153-18046271 - GCCG----GGTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTA---------------------GATTAA-------------------------------------------------------TCACCA----------------------------------------------A---------CCAACTTAATCCTAAATTAATGGCTGTC---------------------------------------CCTTTC-TTTTAAGGAGGAGGGTCGGGAGGCGGAGGCCACTTCGCCGTCGGAGAATACGCGATT
droYak3 2R:9203334-9203503 - GAGCCGACGGCGTTTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACTC---C--TTGAGCAAAGTAAC---ACTTTCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTCTTAATTGATTGCTGTA---------------------------------------CCTTTCTTTTTAAGGAGGAGGGTCGGGAGGCGGAGGCCACTTCGCCGTCGGAGAATACGCGATT
droEug1 scf7180000409462:736450-736825 - GCGCCGATGGCGTCTCCTCTGAGGGTGAGAAGCCGGCGGTGGGTGTTGAGGTAAG-----GACGAATTC--TTGTCCAAAATAGC---AATTTCTTTGATGGCTAGATAACGGTGGAG-AAAAGCAGGTTGGTCCGAGTGAGACC-----CTGCATGGGATTGAATCTGTTTTGAATGTTACTAATAACTCCGAGTTACGGTTT-TAGCCATTTCCCACCATT---------------------------------CGGATTTAAT---------------TTTA-ACTTCGTTTTAACATTAAAAGCAAGTGCAAAATTTT--CGATTTATAATTAGCTAAAAA----------------GAAACTTGTGTCTGCG--------------------------------------------------------CCAACTAA-------CGTGAT-GATTTT---------------------------------------TCTGCC-TTTCTAGGAGGAGGGTCGAGAGGCAGAGGCCACCTCCCCGTCGGAGAACACGCGTTT
droBia1 scf7180000302292:536109-536249 + GCGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACGCGTTC--TTGTCAAGA---AC---ACTT--TCTGATGGCTAGTTAGCGGTGGAA-AGAAGCAGGTTGGTCCGACTGAGACC-----CTGCATGGAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415820:110923-111042 + GTAGAGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCTATACTGTAT------------------------T--------------------------------------------------CTTCA--------------------------------------------------------CCAACTTAATTCTAACTCTATCGATTTT---------------------------------------CCTGTC-TTTCAAGGAGGAGGGTCGGGAGGCGGAGGCCACCTCGCCGTCGGAAAACACGCGATT
droEle1 scf7180000491214:3241747-3241894 + GCGCCGATGGCGTCTCGTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACGCGTTC--TTGTCCCAAGTAGCACCACTTTCTCTGGTGGCTAGTTGGCGGTGGAG-AGCAGCAGGTTGGTCCGAATGCGACC-----TTGCATGGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779932:147029-147174 + GCGCCGATGGCGTCTCGTCTGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACGCGTTC--TTGTCCAAAGTAGC---ACTTTCTCTGGTGGCTAGTTAACAGTGGAG-ATCAGCAGGTTGGTCCGAATGAGACC-----CTGCATGGGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453948:874957-875301 + GCGCTGATGGCGTCTCCTCTGAAGGCGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACCCGTTC--TTGTCCAAAGTAGC---ACTTGTTCTGGTGGCTGGTAAACGGTGGAT-CGAATCAGGTTGGTCCGAATGAGACC-----CTGAATGGGAGAAT--------GGAATGAAA-------------GA----------AGT----------------------------------------------------------------------------TCTA---------------------GAATAA-------------------------------------------------------ATAGCACTAACACGTATCTTAATTTAGTTTATGCAAGCTAAACAAGTTTTTAA---------TCAATTTA----------TATCAATTTAAGTTTGTACATGTATTCGGATGTATGAATAAAATTTTGTTTTGAT-TTTTAAGGAGGAAGGTCGAGAGGCGGAGGCCACCTCGCCGTCGGAGAACACGCGCTT
droKik1 scf7180000302682:1524412-1524580 - GCGCAGACGGTGTCTCCTCTGAGGGCGAGAAGCAGGCGGTGGGCGTGGAAGTAAG-----GAAGCATTA--TTAAA-------------AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCA-----------------------------TTTTTAACA-----------------------------------------------------------------------TTATTAAATT---TG----------TTATTTTTGTT---------------------------------------TTTGTC-TTTCAAGGAGGAGGGTCGCGAAGCAGAGGCCACCTCACCGTCGGAGAACACGCGTTT
droAna3 scaffold_13266:8566626-8566789 + GCACTGATGGCGTATCGTCGGAGGGTGAGAAGCAGGCCGTGGGTGTGGAGGTAAG-----GACACATTT--CAGGGATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------ATCACAA-----------------------------------------------------------------------A---------AATGCTGAAC-----------CATTTTT---------------------------------------CCTTTT-TTTTTAGGAGGAGGGTCGGGAGGCAGAGGCCACCTCTCCGTCGGAGAACACACGATT
droBip1 scf7180000396759:238152-238321 - GCACTGATGGCGTATCCTCGGAGGGAGAGAAGCAGGCCGTGGGTGTCGAGGTAAG-----GATGCATTT--TTGTA-------------CTTTATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------ATCACAA-----------------------------------------------------------------------AATTACTAAC-CTACG---------------CTATGCT---------------------------------------GTTTGT-TTTTTAGGAGGAGGGTCGTGAGGCAGAGGCCACCTCACCTTCGGAGAATACACGATT
dp5 3:16335858-16336168 + GCACAGATGGAGTCTCCTCAGAGGGTGAGAAGCAGACAGTGGGTGTTGAGGTAAGA--AGGACGCGCTT--TTACCAAAGATAGC---GTAATCTCTGA---CTAGT-AGCCATGGCGTGGTTTCAGGTTGGT------GAAACTCCTGACTGCATGCGAT-------AATTGGAATGCGACTAACATC-A---GTTGTTGTTA-AAGTCCTTGCCCAT-ATT---------------------------------TGCTACTAAC---------------TATA-CCATCCCCTAT------------------------T---------------------------------------------------------------------------------CGCTGCTGATCAACATTTTAA------------------------CACGAT--------------------------------------------CTATTCTC-TTTAAAGGAGGAGGGACGCGAGGCCGAGGCCACGTCCCCGTCGGACAACACGCGATA
droPer2 scaffold_4:427168-427470 - GCACAGATGGAGTCTCCTCAGAGGGTGAGAAGCAGACAGTGGGTGTTGAGGTAAGA--AGGACGCGCTT--TTACCAAAGATAGC---GTAATC-----------GT-AGCCATGGCGTGGTTTCAGGTTGGT------GAAACTCCTGACTGCATGCGAT-------AATTGGAATGCGACTAACATC-A---GTTGTTGTTA-AAGTCCTTGCCTAT-ATT---------------------------------TGCTACTAAC---------------TATA-CCATCCCCTAT------------------------T---------------------------------------------------------------------------------CGCTGCTGATCAACATTTTAA------------------------CACGAT--------------------------------------------CTATTCTC-TTTAAAGGAGGAGGGACGCGAGGCCGAGGCCACGTCCCCGTCGGACAACACGCGATA
droWil2 scf2_1100000004513:1863138-1863188 - GTACCGATGGCGTCTCCTCCGAGGGCGAGAAACAGGCTGTCGAAGTGGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:17606600-17606764 - GCGCCGATGGCGTCTCGTCAGAGGGCGAAAAACAGGCCGTCGAAGTTGAGGTAAGCTAT---T------CCAA--ATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TCA-----TGT---------------------GTGTGTACACAA--------------------------------------------------------------------ATAACAAC-----TTA---------------ATGT-----------------------------------------GTTCC-TTTCCAGGAGGAGGGTCGCGAAGCCGAGGCCACATCCCCTTCGGAGAACACACGCTT
droMoj3 scaffold_6496:11230221-11230390 - GCGCCGATGGGGTCTCATCAGAGGGCGAAAAACAGGCTGTTGAAGTTGAGGTAATC--A---T------CTAA--ATA-----------GCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------------------TG---------------------------TACACCAAGAAG-----AG---------------------------------------------------------TATCAAT---------------ATCTACAAATGTA---------------------------------------TTTATT-TTACCAGGAGGAAGGTCGCGAAGCTGAGGCCACGTCTCCATCGGAGAACACACGCTT
droGri2 scaffold_15245:14075210-14075382 + GTGCCGATGGTGTATCTTCAGAAGGCGAAAAACAGGCCGTTGAAGTGGAGGTAACC--C-GAC--------AA--ACATAGTTGA---TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTACA-----------------------------------------------------------------------ATATTTAATAAATGC----------TTATCCCTCTA---------------------------------------AATCTG-TGCACAGGAGGAGGGTCGCGAAGCGGAAGCCACATCGCCATCGGAGAACACACGGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---ACTTGCCTTGGTGGCAAGATAGCTGTGTAG-AAAAGCAGGTCGGTCCCGGTGAGACC-----CTGCATGGAAATAC---------------G--TAACGTC-G---GGTGT------------------------------------------------------------------------------------AACCCA---------------------GACCAA-------------------------------------------------------TCTGCA--------------------------------------------------------CCAACTGAATCCTAAATTGATTGCTCTC---------------------------------------CATTTC-TTTTTAGGAGGAGGGTCGCGAGGCGGAGGCCACTTCGCCGTCGGAGAACACTAGATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........GTCTCCTCCGAGGGTGAGAAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.......................................................................................................................................................................................AACGTC-G---GGTGT------------------------------------------------------------------------------------AACCCA---------------------G.............................................................................................................................................................................................................................................................1911.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGTCGGAGAACACTAGAT.2111.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCCACTTCGCCGTCGGA............2211.00100010000000000000
droSec2
GAGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---ACTTGCCTTGGTGGCAAGATAGCTGTGTAG-AAAAGCAGGTCGGTCCCAGTGAGACC-----CTGTATGGAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTA---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
GAGCCGACGGCGTCTCCTCCGAGGGTGAAAAGCAGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---ACTTGCATTGGTGGCAAGATAGCTGTGGAG-AAAAGCAGGTTGGTCCCGATGAGACC-----CTGCATGGAAATACG-TTGCTTTGAATGTAATTAACCCC-ATGGGATATGATTTGTAG----TTCACCCCACTTATGGAGTGCATGGAATATTAAATACTGAAGAATGGATGTAATGTTTCTGTTGTAATCCAAACCAA---------------------GACCAA-------------------------------------------------------TCTGCA--------------------------------------------------------CCAACTGAATCCTAAATTGATTGCTCTC---------------------------------------CATTTC-TTTTTAGGAGGAGGGTCGGGAGGCGGAGGCCACTTCACCGTCGGAGAACACGCGATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCACTTCACCGTCGGAGAA.........2315.0050000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTGAAAAGCAGGCGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGGTCGGGAGGCGGA..............................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000
................................CAGGCGGTGGGTGTTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGGGAGGCGGAGGCCA.........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTCGGGAGGCGGAGGCC..........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGGTCGGGAGGCGGAG.............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100100
...............CCTCCGAGGGTGAAAAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGGTCGGGAGGCGG...............................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000
.................................AGGCGGTGGGTGTTGAGGTAAGT--AG------------------------T---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTGAAAAGCAGGCGGTGGGTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ATTTGTAG----TTCACCCCACTTATGGAGT.............................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGGTCGGGAGGCGGA..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGGTGAAAAGCAGGCGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGTCGGGAGGCGGAGG............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TGTGGAG-AAAAGCAGGTTGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCACCGTCGGAGAACACGCGATT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..GCCGACGGCGTCTCCTCCGAGGGTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................T---ACTTGCATTGGTGGCAAGATAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATGGAGTGCATGGAATATTAAATACTG.........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................TCCGAGGGTGAAAAGCAGGCGGTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCCACTTCACCGTCGGAGAA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CCTCCGAGGGTGAAAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAAACCAA---------------------GACCAA-------------------------------------------------------TCTGCA--------------------------------------------------------CCAACT.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTCTCCTCCGAGGGTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CC-----CTGCATGGAAATACG-TTGCTTTGA.....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTGAAAAGCAGGCGGTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCCACTTCACCGTCGGA............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGGGTGAAAAGCAGGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............TCCTCCGAGGGTGAAAAGCAGGCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGAGGGTGAAAAGCAGGCGGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................TGAAGAATGGATGTAATGTTTCTGT..................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCTCCTCCGAGGGTGAAAAGCAGGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGGAGGCCACTTCACCGTCGGAGA..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GATATGATTTGTAG----TTCACCCT........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CATTGGTGGCAAGATAGCTGTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTCGGGAGGCGGAGGC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATTGCTCTC---------------------------------------CATTTC-TTTTTAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCCTCCGAGGGTGAAAAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGGAGGCCACTTCAC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCGAGGGTGAAAAGCAGGCGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCACTTCACCGTCGGAG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCACTTCACCGTCGGAGAACACG.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCCACTTCACCGTCGGAGA..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................ATTGGTGGCAAGATAGCTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....GACGGCGTCTCCTCCGAGGGTGAAAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CAAGATAGCTGTGGAG-AAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGGTCGGGAGGCGGAAA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................GATAGCTGTGGAG-AAAAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGGTCGGGAGGCGGAGGC...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAAAAGCAGGCGGTGGGTGTTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTTCACCGTCGGAGAACACGCG...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCGGAGGCCACTTCACCGTCGGA............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CTGAAGAATGGATGTAATGTT.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGGTCGGGAGGCGGAGG............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................GGTGAAAAGCAGGCGGTGGGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGGAGGCCACTTCACCGTCGGAA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ATGGAATATTAAATACTGAAGAATGG.................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGTCGGGAGGCGGAGGCCACT.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTTCACCGTCGGAGAACACGC....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................TCCGAGGGTGAAAAGCAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGGTCGGGAGGCGGAGGCCA.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TCTCCTCCGAGGGTGAAAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTCTCCTCCGAGGGTGAAAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.................................AGGCGGTGGGTGTTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ATGAGACC-----CTGCATGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTCGGGAGGCGGAGGCCA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCCG----GGTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTA---------------------GATTAA-------------------------------------------------------TCACCA----------------------------------------------A---------CCAACTTAATCCTAAATTAATGGCTGTC---------------------------------------CCTTTC-TTTTAAGGAGGAGGGTCGGGAGGCGGAGGCCACTTCGCCGTCGGAGAATACGCGATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGGTCGGGAGGCGGAG.............................2211.0011000000
droYak3
GAGCCGACGGCGTTTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACTC---C--TTGAGCAAAGTAAC---ACTTTCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTCTTAATTGATTGCTGTA---------------------------------------CCTTTCTTTTTAAGGAGGAGGGTCGGGAGGCGGAGGCCACTTCGCCGTCGGAGAATACGCGATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....CGACGGCGTTTCCTCCGAGGGTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
GCGCCGATGGCGTCTCCTCTGAGGGTGAGAAGCCGGCGGTGGGTGTTGAGGTAAG-----GACGAATTC--TTGTCCAAAATAGC---AATTTCTTTGATGGCTAGATAACGGTGGAG-AAAAGCAGGTTGGTCCGAGTGAGACC-----CTGCATGGGATTGAATCTGTTTTGAATGTTACTAATAACTCCGAGTTACGGTTT-TAGCCATTTCCCACCATT---------------------------------CGGATTTAAT---------------TTTA-ACTTCGTTTTAACATTAAAAGCAAGTGCAAAATTTT--CGATTTATAATTAGCTAAAAA----------------GAAACTTGTGTCTGCG--------------------------------------------------------CCAACTAA-------CGTGAT-GATTTT---------------------------------------TCTGCC-TTTCTAGGAGGAGGGTCGAGAGGCAGAGGCCACCTCCCCGTCGGAGAACACGCGTTTSizeHit CountTotal NormTotal
No Reads
droBia1
GCGCCGACGGCGTCTCCTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACGCGTTC--TTGTCAAGA---AC---ACTT--TCTGATGGCTAGTTAGCGGTGGAA-AGAAGCAGGTTGGTCCGACTGAGACC-----CTGCATGGAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTAGAGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCTATACTGTAT------------------------T--------------------------------------------------CTTCA--------------------------------------------------------CCAACTTAATTCTAACTCTATCGATTTT---------------------------------------CCTGTC-TTTCAAGGAGGAGGGTCGGGAGGCGGAGGCCACCTCGCCGTCGGAAAACACGCGATTSizeHit CountTotal NormTotal
No Reads
droEle1
GCGCCGATGGCGTCTCGTCCGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACGCGTTC--TTGTCCCAAGTAGCACCACTTTCTCTGGTGGCTAGTTGGCGGTGGAG-AGCAGCAGGTTGGTCCGAATGCGACC-----TTGCATGGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCGCCGATGGCGTCTCGTCTGAGGGTGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACGCGTTC--TTGTCCAAAGTAGC---ACTTTCTCTGGTGGCTAGTTAACAGTGGAG-ATCAGCAGGTTGGTCCGAATGAGACC-----CTGCATGGGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCGCTGATGGCGTCTCCTCTGAAGGCGAGAAGCAGGCGGTGGGTGTTGAGGTAAG-----GACCCGTTC--TTGTCCAAAGTAGC---ACTTGTTCTGGTGGCTGGTAAACGGTGGAT-CGAATCAGGTTGGTCCGAATGAGACC-----CTGAATGGGAGAAT--------GGAATGAAA-------------GA----------AGT----------------------------------------------------------------------------TCTA---------------------GAATAA-------------------------------------------------------ATAGCACTAACACGTATCTTAATTTAGTTTATGCAAGCTAAACAAGTTTTTAA---------TCAATTTA----------TATCAATTTAAGTTTGTACATGTATTCGGATGTATGAATAAAATTTTGTTTTGAT-TTTTAAGGAGGAAGGTCGAGAGGCGGAGGCCACCTCGCCGTCGGAGAACACGCGCTTSizeHit CountTotal NormTotal
No Reads
droKik1
GCGCAGACGGTGTCTCCTCTGAGGGCGAGAAGCAGGCGGTGGGCGTGGAAGTAAG-----GAAGCATTA--TTAAA-------------AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCA-----------------------------TTTTTAACA-----------------------------------------------------------------------TTATTAAATT---TG----------TTATTTTTGTT---------------------------------------TTTGTC-TTTCAAGGAGGAGGGTCGCGAAGCAGAGGCCACCTCACCGTCGGAGAACACGCGTTTSizeHit CountTotal NormTotal
No Reads
droAna3
GCACTGATGGCGTATCGTCGGAGGGTGAGAAGCAGGCCGTGGGTGTGGAGGTAAG-----GACACATTT--CAGGGATAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------ATCACAA-----------------------------------------------------------------------A---------AATGCTGAAC-----------CATTTTT---------------------------------------CCTTTT-TTTTTAGGAGGAGGGTCGGGAGGCAGAGGCCACCTCTCCGTCGGAGAACACACGATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................AGGCCGTGGGTGTGGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGGTCGGGAGGC.................................1811.001100000
droBip1
GCACTGATGGCGTATCCTCGGAGGGAGAGAAGCAGGCCGTGGGTGTCGAGGTAAG-----GATGCATTT--TTGTA-------------CTTTATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------ATCACAA-----------------------------------------------------------------------AATTACTAAC-CTACG---------------CTATGCT---------------------------------------GTTTGT-TTTTTAGGAGGAGGGTCGTGAGGCAGAGGCCACCTCACCTTCGGAGAATACACGATTSizeHit CountTotal NormTotal
No Reads
dp5
GCACAGATGGAGTCTCCTCAGAGGGTGAGAAGCAGACAGTGGGTGTTGAGGTAAGA--AGGACGCGCTT--TTACCAAAGATAGC---GTAATCTCTGA---CTAGT-AGCCATGGCGTGGTTTCAGGTTGGT------GAAACTCCTGACTGCATGCGAT-------AATTGGAATGCGACTAACATC-A---GTTGTTGTTA-AAGTCCTTGCCCAT-ATT---------------------------------TGCTACTAAC---------------TATA-CCATCCCCTAT------------------------T---------------------------------------------------------------------------------CGCTGCTGATCAACATTTTAA------------------------CACGAT--------------------------------------------CTATTCTC-TTTAAAGGAGGAGGGACGCGAGGCCGAGGCCACGTCCCCGTCGGACAACACGCGATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............TCTCCTCAGAGGGTGAGAAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................TATA-CCATCCCCTAT------------------------T---------------------------------------------------------------------------------CGCTGCTG.........................................................................................................................................................2411.0010100000000
droPer2
GCACAGATGGAGTCTCCTCAGAGGGTGAGAAGCAGACAGTGGGTGTTGAGGTAAGA--AGGACGCGCTT--TTACCAAAGATAGC---GTAATC-----------GT-AGCCATGGCGTGGTTTCAGGTTGGT------GAAACTCCTGACTGCATGCGAT-------AATTGGAATGCGACTAACATC-A---GTTGTTGTTA-AAGTCCTTGCCTAT-ATT---------------------------------TGCTACTAAC---------------TATA-CCATCCCCTAT------------------------T---------------------------------------------------------------------------------CGCTGCTGATCAACATTTTAA------------------------CACGAT--------------------------------------------CTATTCTC-TTTAAAGGAGGAGGGACGCGAGGCCGAGGCCACGTCCCCGTCGGACAACACGCGATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................AGCAGACAGTGGGTGTTGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCGAGGCCACGTCCCCGTC...............2311.001001000
droWil2
GTACCGATGGCGTCTCCTCCGAGGGCGAGAAACAGGCTGTCGAAGTGGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.TACCGATGGCGTCTCCTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..............................AACAGGCTGTCGAAGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..ACCGATGGCGTCTCCTCCGAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..................CCGAGGGCGAGAAACAGGCTGTCGAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
droVir3
GCGCCGATGGCGTCTCGTCAGAGGGCGAAAAACAGGCCGTCGAAGTTGAGGTAAGCTAT---T------CCAA--ATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TCA-----TGT---------------------GTGTGTACACAA--------------------------------------------------------------------ATAACAAC-----TTA---------------ATGT-----------------------------------------GTTCC-TTTCCAGGAGGAGGGTCGCGAAGCCGAGGCCACATCCCCTTCGGAGAACACACGCTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCCACATCCCCTTCGGAG...........2111.001000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGTCGCGAAGCCGAGGC...........................2111.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACATCCCCTTCGGAGAACAC......2411.001000000000000000000000000000000000001000000000000000000000000000
..............................AACAGGCCGTCGAAGTTGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
..............................AACAGGCCGTCGAAGTTGAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
..............TCGTCAGAGGGCGAAAAACAGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCGCCGATGGGGTCTCATCAGAGGGCGAAAAACAGGCTGTTGAAGTTGAGGTAATC--A---T------CTAA--ATA-----------GCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------------------TG---------------------------TACACCAAGAAG-----AG---------------------------------------------------------TATCAAT---------------ATCTACAAATGTA---------------------------------------TTTATT-TTACCAGGAGGAAGGTCGCGAAGCTGAGGCCACGTCTCCATCGGAGAACACACGCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGCCACGTCTCCATCG..............2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTCCATCGGAGAACACACGC..2311.001000100
droGri2
GTGCCGATGGTGTATCTTCAGAAGGCGAAAAACAGGCCGTTGAAGTGGAGGTAACC--C-GAC--------AA--ACATAGTTGA---TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTACA-----------------------------------------------------------------------ATATTTAATAAATGC----------TTATCCCTCTA---------------------------------------AATCTG-TGCACAGGAGGAGGGTCGCGAAGCGGAAGCCACATCGCCATCGGAGAACACACGGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:34 AM