ID:

dsi_19587

 Coordinate:

x:20419120-20419269 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2

Flybase annnotation

exon [x_20418922_20419119_+]; CDS [x_20418922_20419119_+]; intron [x_20419120_20420059_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAAATGGACTGCTGGACAATGATTGCGACTCCAGCAAGTACCAGAACTTGTAAGTTTTTTTTAAAAGCCTGTTTGAATCTATCGTCAGGTATTTTTAAATTATATTCGATTACGACATAATTAAGCGATCTAGTATTCTTATATTGAATTGTTTACCTTTTCTGAGGCTGATTGCTTAGCAATCGCTTATTGATTTCTAAACGATAATATTTCTCCGATTTTCTCGTAGTGATCACCATGGGAAATGTT
***************************************************************************************************************.............................................((((....))))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body
................................................................................................................................................................................................................................TCGTAGTGATCACCA........... 15 0 1 2.00 2 2 0 0 0 0 0 0
...............GACAATGATTGCGACTCCAGC...................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0
...............................................................................................................TACGACATAATTAAGCGATCTAGTAT................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................................................CTCGTAGTGATCACCA........... 16 0 1 2.00 2 1 1 0 0 0 0 0
..AAATGGACTGCTGGACAAT..................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................TTTTCTCGTAGTGATCACCATGGGAAA.... 27 0 1 1.00 1 0 0 1 0 0 0 0
.TACATGGACTGCTGGACAATGAT.................................................................................................................................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................ATTTTCTCGTAGTGATCGCCA........... 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................AATTGTTTACCTTTTCTGAGG.................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................TCTCGTAGTGATCACCA........... 17 0 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TTCTCGTAGGGGTCACCA........... 18 2 6 0.83 5 0 5 0 0 0 0 0
...........................................................................................................................................................ACCTTTTCTGACGCT................................................................................ 15 1 4 0.50 2 0 2 0 0 0 0 0
..........................................................................................................................................................TACCTCTTCTGACGCTGA.............................................................................. 18 2 5 0.40 2 0 2 0 0 0 0 0
...........................................................................................................................................................ACCTTTTCTGACGCTGA.............................................................................. 17 1 3 0.33 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................TCTCGTAGGGGTCACCA........... 17 2 20 0.30 6 0 6 0 0 0 0 0
............................................................................................................................................................CCTTTTCTGACGCTGA.............................................................................. 16 1 5 0.20 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................TCGTAGTGACCACCA........... 15 1 6 0.17 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................ATTTTGTCGTACTCATCACC............ 20 3 12 0.17 2 2 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTCACGTAGGGTTCACCA........... 19 3 20 0.15 3 3 0 0 0 0 0 0
........................................................................................................................................TTGTTATATTGAATTGT................................................................................................. 17 1 7 0.14 1 0 0 1 0 0 0 0
.....................................................................................................................................GTAGTCTGATATTGAATT................................................................................................... 18 2 7 0.14 1 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................TATTCTCGTAGTTGTCACCA........... 20 3 8 0.13 1 0 1 0 0 0 0 0
......................AATGCGATTCCAGCAAGGACC............................................................................................................................................................................................................... 21 3 9 0.11 1 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................TCTCGTAGTCTTCACCA........... 17 2 9 0.11 1 0 1 0 0 0 0 0
.......................................................................................................................................................................GCTGGTTGCTTAGCA.................................................................... 15 1 9 0.11 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................TCTCCTAGAGATCACCA........... 17 2 9 0.11 1 1 0 0 0 0 0 0
..........................................................................................................................................................TACCTCTTCTGATGCTGA.............................................................................. 18 2 10 0.10 1 0 1 0 0 0 0 0
............................................................................................................................................................CCTTTTCTGACGCTG............................................................................... 15 1 11 0.09 1 0 1 0 0 0 0 0
.........................................................................................................................................................GTACCTCTTCTGACGCTGA.............................................................................. 19 3 16 0.06 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................................ATTCTCGTAGGGCTCACCA........... 19 3 17 0.06 1 0 1 0 0 0 0 0
............................................................................................................................................................ACTTGTCTGAGGCTGA.............................................................................. 16 2 20 0.05 1 0 1 0 0 0 0 0
................................................................................TATCCTCAGGCATTGTTAAA...................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

TGTTTACCTGACGACCTGTTACTAACGCTGAGGTCGTTCATGGTCTTGAACATTCAAAAAAAATTTTCGGACAAACTTAGATAGCAGTCCATAAAAATTTAATATAAGCTAATGCTGTATTAATTCGCTAGATCATAAGAATATAACTTAACAAATGGAAAAGACTCCGACTAACGAATCGTTAGCGAATAACTAAAGATTTGCTATTATAAAGAGGCTAAAAGAGCATCACTAGTGGTACCCTTTACAA
**********************************************************************************.............................................((((....))))*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M023
head
......................................................................................................................................................................................................................AGGCTAAAAGAGCATCACTAGTGGT........... 25 0 1 4.00 4 4 0 0 0 0 0 0 0
...................................................................................................................TGTATTAATTCGCTAGATCATAAGA.............................................................................................................. 25 0 1 3.00 3 0 1 1 1 0 0 0 0
...................TACTAACGCTGAGGTCGTTCATGGTCT............................................................................................................................................................................................................ 27 0 1 2.00 2 0 0 0 0 2 0 0 0
......................................................................................................................................................................................................................AGGCTAAAAGAGCATCACTAGCGGT........... 25 1 1 2.00 2 0 0 2 0 0 0 0 0
....................................................................................................................................................................................................................AGAGGCTAAAAGAGCATCACTAGTGGT........... 27 0 1 2.00 2 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................AGAGGCTAAAAGAGCATCACTAGCGGT........... 27 1 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................AGATAGCAGTCCATAAAAAT........................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................AGAGGCTAAAAGAGCAT..................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CTAAAAGAGCATCACTAGTGGTACCC....... 26 0 1 1.00 1 0 0 0 0 0 1 0 0
..............................................................................AGATAGCAGTCCATAAAAATT....................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................TAAAAGAGCATCACTAGCGGTACCCT...... 26 1 1 1.00 1 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................AAAGAGGCTAAAAGAGCATCACTAGTGGT........... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................TAATTCGCTAGATCATAAATATATAACTT..................................................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTAAAAGAGCATCACTAGCGGTACCC....... 26 1 1 1.00 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................CTAAAGATTTGCTATTATAAAGAGGCT............................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................ATGGAAAAGACTCCGACTAACGAAT....................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................TAATGCTGTATTAATTCGCTAGAT..................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................TCATGGTCTTGAACATTCAAAAAAAAT.......................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
....................................................................................................................GTATTAATTCGCTAGATCATAAGAAT............................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0
........................................................................AAACTTAGATAGCAGTCCATAAAAAT........................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................TCATGGTCTTGAACATTCAAAAAAAATT......................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AAAGAGGCTAAAAGAGCATCACTAGT.............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...............CTGTTACTAACGCTGAGGTCGTTCAT................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................TAATTCACTAGATGATAAGTAT............................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................AGATAGCAGTCCATAAAAATTTAATATAA............................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................TAATGCTGTATTAATTCGCTAGATCAT.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................TTTCGGACCTTCTTAGATAGC..................................................................................................................................................................... 21 3 5 0.60 3 0 0 0 0 0 0 3 0
........................ACCCTGAGGTGGTTCATGGACT............................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 1 0 0
.......................................................AAAAAAAATTGTCGGAC.................................................................................................................................................................................. 17 1 6 0.17 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................CTAAAGATTTGCTCTTAT........................................ 18 1 9 0.11 1 0 0 0 0 0 1 0 0
............GCGCTGTTACTAACACTG............................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20419070-20419319 + dsi_19587 ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTACCAGAACTTGTAAGTTTTTT----TTAAA-----------AGCCTGTTT-GAATC----------------TATCGTCAGGTATTTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTCGATTACGACATAATTAAGCGATCTAGTATTCTTA------------TATTGAAT----------------------TGTTTACC----------------------------------------TTTTCTG--AGGCTGATTGCTTAGCAATCGC-TTATTGATTTC--------------------------TA-----------AACG-ATAATATTTCTCCGATTTTCTC-------GTAGT------------------GATC-------------------------------------------ACCATGG--GAAATGTT
droSec2 scaffold_55:55211-55460 + ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTACCAGAACTTGTAAGTTTTTT----TTAAA-----------AGCATGTTT-AAATC----------------TATCGTCAGGTATTTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTCGATTACGACATAATTAAGCGATCTAGTATTCTTA------------TATTGAAT----------------------TGTTTACC----------------------------------------TTTTCTG--AGGCTGATTGCTTAGCAATCGC-TTATTGATTTC--------------------------TA-----------AACG-ATAATATTTCTTCGATTTTCTC-------GTAGT------------------GATC-------------------------------------------GCCATTG--GAAATGTT
dm3 chrX:21898648-21898927 + ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTACCAAAACTTGTAAGTTTGTT----TAAAA-----------AAAA------AAACCGATTTAAACGG--G-TTATCGTTAGGTATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATCATTGTTTTATCAAACAAATTATGTTCGATTATGACATATTTAAGTGATCTAGAATTCTTA------------TATTGAAT----------------------TGTTTAAC----------------------------------------TTTTCTAAAAGGTTAATTGCTTTGCAATCGC-TTATTGATTTC--------------------------TC-----------AACA-ATAATATTTTCTCGATTTTGTC-------GTAGT------------------GATC-------------------------------------------GCAATGG--GAAATGTT
droEre2 scaffold_4690:18273816-18274114 + ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTATCAAAACTTGTAAGTTCTTT----TTGAA-----------AGCCTGTTT-GAACCCAC-----------------ACAAGGGGTTTGTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTGGGTTTATTTCGTAATTGTTTAGGGTTTTGTCATAT---------------TTAAACAATTGCTTTATTCAACTAATTGTATCCGAAGATGACAAATTTAAGTGATCTAG-ATTATTA------------TATTGAAT----------------------TGTTTACCT------------------------------------GCCTTTTCTA--AGACTAATTGCTTTGCAATCG----------------------------------------------------AAAA-ACAATATTTCCCTGCTTTTCTC-------GTAGT------------------TATT-------------------------------------------ACCATG------GGAAT
droYak3 X:21341799-21342022 + ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTATCAAAACTTGTAAGTTCATT----TTACA-----------AGCCTGTTT-CAACCCACTCAATTGG--GCTTATCACCAGCTATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAACTATTGCTTTATTAAGCACATTATATCCGAAGATGACATAAATAAGTGATATAGTATTCTTA------------TGCTGAAT----------------------TGTTTACCT------------------------------------GGCTTTTCTA--AGACTAATTACTTTGCAATCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000407331:67721-67975 + ACGAATGGGCTTTTGGACAATGACTGTGACTC----CAGCAAGTATCAGAACCTGTAAGTAAATC----TGGAA-----------A-TATGT-------------------------ATCAGT------------------------------------------------------------------------------------------------------------------------GGCA---GTACTTAGAGC---------------------------------------------------------------------------------------------------ACCA--------------------------------------------------------------------------------------------------------------TAACTGCGTTAGAGTATGAAATAATTTCGCGATCTAAAGTTCTT-------------TTTTAAAT----------------------TGTTTATG--------------------------------------ACTACTGAA--AGGCCGCCTTATGGGGGATCGC-TAAGTAATTTC--------------------------TAATACCATTATT--TG-ATGGTATTTTCTGTATTTTC-C-------ATATTA-----------------AACT-------------------------------------------GCCAT-------TGATT
droBia1 scf7180000302087:242822-243078 + AGTATTAGAAC-----------------------------------------TATTGTTTCTTAT----TTTAA------------G-CTGTTT-AACA-------------------TCGTTTAGAATTTTCG----------------------------------GGAC------------------TCTTA--------------------AATAAGGAT-----TT------------GTTACAAATTGATA--------------AACTTAAAAAC-AAAATAAAATTTTCATATTGAAAGATTCCAAAAATCTTGTTTTGCATATTACTTTTCAACGGAGCATCCG--ATTTTGAAGATTCATTCGATGCGTATTTTAAGTGAGATTACATTTCTTTTTG--------------------------------------------------------------------------------------------------------------TA------------CTC------------------------------------------------------------------------------------------GTATATAT------------------------------------------------------------------------------------------------GT------------------AGTC-------------------------------------------GCCTTCG--CGCATTTT
droTak1 scf7180000416008:362355-362609 + AAT---GAATGTCTGGGTATTAATATCAACAC----GCACAAGCATCCAAATTGCTGCA--------------------------------------------------------------------------------------------------------------------ACTTGTTCTGCCAAGCTAATGTTAAAGATGTGTGTTTCTAAATAAATAT-ATGTACCTAACTGTTGGA--TAAA-------AATGATTTTGTATTTTTATAATTTGGA-----------------------------------------------CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCGA------------TTTAGGATTTTTGGTTTATCGAATAATAGA---------TTT---------------------------------AATAAATTAA--ATGTTAAC-----------------------------------------------------------------------------TTTTGAATGTTTTTT-------GTAGT------------------AAAA------------AGATT--------------------------CAAATAC--TACGAATT
droEle1 scf7180000489161:13105-13289 - CAAAATT----------------------------------------------CATTAGTTTCTT----TCAAA-----------AGACTTTCG-AAGGT----------------TGT-TTCAGTTTTTGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT---------------TTAA------------------------------------------------------------------------------------------------------------------ACTTAGATAATGATATTC-ATTATTAATGGGA--------------------------------AT--A-TCTATTGGTCCTGTTTTAAATAAAAGA-TATCTGTTTT---GGGCCTTATT--GGG---ATTTAT-TTCGAT--ACTC-------TGACT------------------GATT-------------------------------------------GCTAGTG---GAATTAT
droRho1 scf7180000778730:63526-63753 - ACGAATGGACTGCTGGACAATGATTGTGACTC----CAGCAAATATCAGAACCTGTAAGTACCTTTATCTTACA-----------AGACTTTTT-AAATA------ATTGCGAGACGATCAACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATTT-------------------------------------------------------------------------------------CTTAATGATTGCTTTATCAACTG-----CATCAGG----------------------------ATTA------------TATTGAAT----------------------GGTTTACTT------------------------------------GGCTATTTAA--ACATCAATTGCTGATGGATCGC-TAATTGATTTC--------------------------TA-----------AACA-ACAATCAATTTTCGTT-------------------------------------------------------------------------------------------------TTT
droFic1 scf7180000453928:93623-93832 - TTTAAGAGTCGTT-AGAAAA-------------------------------------------------------------------------------------------------------------CT---------------------------------------------------------------------------CTATATTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATATTTATCTGACTAAAAACAACGATGTTATAATTTTATTTCCC-GTATTTCTA------------TATAGATTTTTCGATCTTTCCTATAGCAGC---------TATATGATAACGTTGTCG-AATTTTAATGAAA--------------------------------TT--TTTTTATCGATTCAAGGGTTATTAAAAAACTCCA-------------------------------------TGTTTTG-A-------ACATC-----------------------------------------------------------------A-TGCTC--GTGGGATT
droKik1 scf7180000302270:257369-257540 + TAAGTA-------------------------------------------------------TTTA----ATAAA-----------TGTTCGTTT-A--TT----------------TATTGTTTATAATTTATTTAT--------------------------TAAATTATT------------------TCTTC--------------------ATTTAACAA-----TT------------ATTATACATTTATA-----------TTTATTTTTACTTC-ATTATATAATTATTAATTTAATCGTTTATTTATATATTATTTTATTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-T-------TCTTT-----------------------------------------------------------------T-TATTA--TTTGTTTT
droAna3 scaffold_13034:1284584-1284802 - AAGTACAAATTTTTGGTTTTTTTTTATAGTTG---------------------------------------------------------TATTT-AAAAA----------------TATTTT--ATTTTTTTTTTTT---------------------------------------------------------------------------------------AATATTC------------GATTTGTGTTCTAG-----------TTTTTTTTAATTTA-ATTTTTTCACTTT-------------------------------------------------TACT--CT--TCTTGCTTAT------------------------------------------------------------------------GTTCTTGTTTTTTTT------------------------------------------------------------TTTTA-------AATTTT--------------------------------------------AT----------TTA--------------GTT-------A--ATTTTTCCAC----------------------------------------------------------------------------TTTTTTCGAGTTTTTTTGAGTTTTCACT------------------TTTT-------------------------------------------GGTGGTCAAAAAAAATT
droBip1 scf7180000392513:290-474 - TTGTGGTATTTTT--------------------------------------------------------TTAAA-----------TATTTTTTTAAAAAT----------------ATTTTTTTGGTATTTTTTTTT---------------------------------------------------------T-----------------------------GGTTTTT----------AT--TTTG-------TAAATTTTAGTATTTTTTTTGGTAAAT-----------------------------------------------TTTGTTTTTCTTTGGTACT--TT--TGTTTGTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTATTTTTT-TGT-------------------------------------------------------ATATTTTTTGGTATTGTTT-------TTGGT------------------TATT---------------------------------------------TATTT--GATATTTT
dp5 Unknown_group_743:5524-5753 + TGACT--------------------GCTACTGCCATCAGAA--------AATATATAAACTTTTT----TAAAA-----------AGCTCGTAT-TA---------------------------C--ATATTTGTAA-----------------------------------------------------------------------------------------TATACAAGATTTTGATA--TAAA-------AGTGA--------------------------------------------AGACCGCATTTTTGTCGTGATTTAAATTTTCGCTTATTGAAGCATACT--ACTTCGTACTATCGTGCCACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--AAAAATGGTTTCTT-GTGTAT------AACT-------A--AAATGGGC--------------------------------------------------------------------------------ACTTTGAATTTCAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAGTTTTC
droPer2 scaffold_493:5023-5182 - ATCCCGAGATAAT---------------------------------------------------------------------------------------------------------------------TGTTAGTTATATTCCTCATCATTATTAAGCCATTTAATTGATATTCTTTTTT--TTTATTCTTTTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGCGTACTTTTTATTGGGTTATGTTTAGTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAGGAATCGC-TCAGT---TT--------------------------------------------------------------------------TTAGT------------------CATA-------------------------------------------A-TTTAA--TAAATTTT
droWil2 scf2_1100000004941:167024-167257 - TACTATTGCTT-------------------------------------------CTACGTTTTTC----TTCAT-----------ACCTTGGAA-AAAAT----------------TCTCAGATAAAATTTGTTTTT---------------------------------------------------------T--------------------ATTTTC---GAT----------------GGAA---TTTCTATGTGCTCTAAGGTGTTCTTTAATTATGATTTCTTGTTCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--ATTCCTAAAATGTTC--------------------------------------------------------------CG-GAAATATTTGTTGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--GAAGTGAA
droVir3 scaffold_13324:897781-897978 - AAGTTCA--------------------------------------------------------TG----TTAAA-----------AAATTCTTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAGGAATACG--------------------------------------------------ACCCAATTTAAAAATAATTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---CGCCTTTGCT--GATATATAATTTCCCATTTCCCC-C-------AAATCTGCCTGCCAATAATAATCGATTCCTATCATAATAACCCTTCTACGCTCAAAATTGTTTCGCGCTGG-TCTAT--CCAATGCA
droMoj3 scaffold_6482:2482486-2482736 + ACAAACGGACTGTTGGACAATGACTGCGATTC----GAGCAAGTATCAGAATCTGTAAGTTATCC----GCACG-----------A-TCCAA--------------------------------------------------------------------------------------------------------------------------------ATGA-----AT------------AACATATGTACATA-----------TGTAGCCTTTACTT-GTTAGACAA--------TTGATCGCTTACAAAAATAGTATTTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATTGAAATTTATGACGGAA----------------------TGAATGTC----------------------------------------ACTTCTA--TAAGTGTGTGTGCAGAAGCCAC-GAATGGTTTTA--------------------------CA--------ATT--AG-ATTATAAT----------TTTC-------GTAGA-------------------------------------------------------------------ATTCC--AACAGTCT
droGri2 scaffold_15203:779724-779909 + GAACC-------------------------------AAACAAGTGCCAGTTCTA----------T----GTATGTATCTATGTATAATCAAAAT-AAACC----------------TCTCGCCAATTACTTTTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATACGATGTATGTAAACAACATATTCAAATTACCT-GCATTCTTA------------TTT------------------------------------------------------------------------------------------GTTCCTATGAAATCGT-CTCGCAATTTATACATCATAGATGACTTTTT---------------------------------------------------------------------------------------------------------------------------T-CCTTT--AAAGCTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTACCAGAACTTGTAAGTTTTTT----TTAAA-----------AGCCTGTTT-GAATC----------------TATCGTCAGGTATTTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTCGATTACGACATAATTAAGCGATCTAGTATTCTTA------------TATTGAAT----------------------TGTTTACC----------------------------------------TTTTCTG--AGGCTGATTGCTTAGCAATCGC-TTATTGATTTC--------------------------TA-----------AACG-ATAATATTTCTCCGATTTTCTC-------GTAGT------------------GATC-------------------------------------------ACCATGG--GAAATGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------GTAGT------------------GATC-------------------------------------------ACCA.............1512.00200000000200000000
...............GACAATGATTGCGACTC----CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACATAATTAAGCGATCTAGTAT..........................................................................................................................................................................................................................................................................................................2612.00200000000200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC-------GTAGT------------------GATC-------------------------------------------ACCA.............1612.00200000000110000000
..AAATGGACTGCTGGACAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTC-------GTAGT------------------GATC-------------------------------------------ACCATGG--GAAA....2711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT----------------------TGTTTACC----------------------------------------TTTTCTG--AGG...............................................................................................................................................................................................2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-------GTAGT------------------GATC-------------------------------------------ACCA.............1711.00100000000001000000
droSec2
ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTACCAGAACTTGTAAGTTTTTT----TTAAA-----------AGCATGTTT-AAATC----------------TATCGTCAGGTATTTTTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTCGATTACGACATAATTAAGCGATCTAGTATTCTTA------------TATTGAAT----------------------TGTTTACC----------------------------------------TTTTCTG--AGGCTGATTGCTTAGCAATCGC-TTATTGATTTC--------------------------TA-----------AACG-ATAATATTTCTTCGATTTTCTC-------GTAGT------------------GATC-------------------------------------------GCCATTG--GAAATGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..AAATGGACTGCTGGACAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.........CTGCTGGACAATGATTGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTACCAAAACTTGTAAGTTTGTT----TAAAA-----------AAAA------AAACCGATTTAAACGG--G-TTATCGTTAGGTATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATCATTGTTTTATCAAACAAATTATGTTCGATTATGACATATTTAAGTGATCTAGAATTCTTA------------TATTGAAT----------------------TGTTTAAC----------------------------------------TTTTCTAAAAGGTTAATTGCTTTGCAATCGC-TTATTGATTTC--------------------------TC-----------AACA-ATAATATTTTCTCGATTTTGTC-------GTAGT------------------GATC-------------------------------------------GCAATGG--GAAATGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...AATGGACTGCTGGACAATGATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGACTC----CAGCAAGTACCAAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATGGACTGCTGGACAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAATGATTGCGACTC----CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................TGATTGCGACTC----CAGCAAGTACCAAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGGACAATGATTGCGACTC----CAGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGCGACTC----CAGCAAGTACCAAAACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GACAATGATTGCGACTC----CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................TTGCGACTC----CAGCAAGTACCAAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GACTC----CAGCAAGTACCAAAACTTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATGATTGCGACTC----CAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...............GACAATGATTGCGACTC----CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGTTTGTT----TAAAA-----------AAAA------AAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATGATTGCGACTC----CAGCAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTC-------GTAGT------------------GATC-------------------------------------------GCAATGG--GA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................TGATTGCGACTC----CAGCAAGTACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATTGTTTTATCAAACA.................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACAATGATTGCGACTC----CAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTC-------GTAGT------------------GATC-------------------------------------------GCAATGG--GAAATG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................CAATGATTGCGACTC----CAGCAAGTACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAATGATTGCGACTC----CAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.............TGGACAATGATTGCGACTC----CAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGGACAATGATTGCGACTC----CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGGTTAATTGCTTT....................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATGGACTGCTGGACAATGATTGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGACTGCTGGACAATGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGACTGCTGGACAATGATTGCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTTAATTGCTTTGCAATCGC-TTA........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCTGGACAATGATTGCGACTC----CAGCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTATCAAAACTTGTAAGTTCTTT----TTGAA-----------AGCCTGTTT-GAACCCAC-----------------ACAAGGGGTTTGTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTGGGTTTATTTCGTAATTGTTTAGGGTTTTGTCATAT---------------TTAAACAATTGCTTTATTCAACTAATTGTATCCGAAGATGACAAATTTAAGTGATCTAG-ATTATTA------------TATTGAAT----------------------TGTTTACCT------------------------------------GCCTTTTCTA--AGACTAATTGCTTTGCAATCG----------------------------------------------------AAAA-ACAATATTTCCCTGCTTTTCTC-------GTAGT------------------TATT-------------------------------------------ACCATG------GGAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................TGTAAGTTCTTT----TTGAA-----------AGCCTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.................CAATGATTGCGACTC----CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
ACAAATGGACTGCTGGACAATGATTGCGACTC----CAGCAAGTATCAAAACTTGTAAGTTCATT----TTACA-----------AGCCTGTTT-CAACCCACTCAATTGG--GCTTATCACCAGCTATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAACTATTGCTTTATTAAGCACATTATATCCGAAGATGACATAAATAAGTGATATAGTATTCTTA------------TGCTGAAT----------------------TGTTTACCT------------------------------------GGCTTTTCTA--AGACTAATTACTTTGCAATCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
ACGAATGGGCTTTTGGACAATGACTGTGACTC----CAGCAAGTATCAGAACCTGTAAGTAAATC----TGGAA-----------A-TATGT-------------------------ATCAGT------------------------------------------------------------------------------------------------------------------------GGCA---GTACTTAGAGC---------------------------------------------------------------------------------------------------ACCA--------------------------------------------------------------------------------------------------------------TAACTGCGTTAGAGTATGAAATAATTTCGCGATCTAAAGTTCTT-------------TTTTAAAT----------------------TGTTTATG--------------------------------------ACTACTGAA--AGGCCGCCTTATGGGGGATCGC-TAAGTAATTTC--------------------------TAATACCATTATT--TG-ATGGTATTTTCTGTATTTTC-C-------ATATTA-----------------AACT-------------------------------------------GCCAT-------TGATTSizeHit CountTotal NormTotal
No Reads
droBia1
AGTATTAGAAC-----------------------------------------TATTGTTTCTTAT----TTTAA------------G-CTGTTT-AACA-------------------TCGTTTAGAATTTTCG----------------------------------GGAC------------------TCTTA--------------------AATAAGGAT-----TT------------GTTACAAATTGATA--------------AACTTAAAAAC-AAAATAAAATTTTCATATTGAAAGATTCCAAAAATCTTGTTTTGCATATTACTTTTCAACGGAGCATCCG--ATTTTGAAGATTCATTCGATGCGTATTTTAAGTGAGATTACATTTCTTTTTG--------------------------------------------------------------------------------------------------------------TA------------CTC------------------------------------------------------------------------------------------GTATATAT------------------------------------------------------------------------------------------------GT------------------AGTC-------------------------------------------GCCTTCG--CGCATTTTSizeHit CountTotal NormTotal
No Reads
droTak1
AAT---GAATGTCTGGGTATTAATATCAACAC----GCACAAGCATCCAAATTGCTGCA--------------------------------------------------------------------------------------------------------------------ACTTGTTCTGCCAAGCTAATGTTAAAGATGTGTGTTTCTAAATAAATAT-ATGTACCTAACTGTTGGA--TAAA-------AATGATTTTGTATTTTTATAATTTGGA-----------------------------------------------CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCGA------------TTTAGGATTTTTGGTTTATCGAATAATAGA---------TTT---------------------------------AATAAATTAA--ATGTTAAC-----------------------------------------------------------------------------TTTTGAATGTTTTTT-------GTAGT------------------AAAA------------AGATT--------------------------CAAATAC--TACGAATTSizeHit CountTotal NormTotal
No Reads
droEle1
CAAAATT----------------------------------------------CATTAGTTTCTT----TCAAA-----------AGACTTTCG-AAGGT----------------TGT-TTCAGTTTTTGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT---------------TTAA------------------------------------------------------------------------------------------------------------------ACTTAGATAATGATATTC-ATTATTAATGGGA--------------------------------AT--A-TCTATTGGTCCTGTTTTAAATAAAAGA-TATCTGTTTT---GGGCCTTATT--GGG---ATTTAT-TTCGAT--ACTC-------TGACT------------------GATT-------------------------------------------GCTAGTG---GAATTATSizeHit CountTotal NormTotal
No Reads
droRho1
ACGAATGGACTGCTGGACAATGATTGTGACTC----CAGCAAATATCAGAACCTGTAAGTACCTTTATCTTACA-----------AGACTTTTT-AAATA------ATTGCGAGACGATCAACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATTT-------------------------------------------------------------------------------------CTTAATGATTGCTTTATCAACTG-----CATCAGG----------------------------ATTA------------TATTGAAT----------------------GGTTTACTT------------------------------------GGCTATTTAA--ACATCAATTGCTGATGGATCGC-TAATTGATTTC--------------------------TA-----------AACA-ACAATCAATTTTCGTT-------------------------------------------------------------------------------------------------TTTSizeHit CountTotal NormTotal
No Reads
droFic1
TTTAAGAGTCGTT-AGAAAA-------------------------------------------------------------------------------------------------------------CT---------------------------------------------------------------------------CTATATTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATATTTATCTGACTAAAAACAACGATGTTATAATTTTATTTCCC-GTATTTCTA------------TATAGATTTTTCGATCTTTCCTATAGCAGC---------TATATGATAACGTTGTCG-AATTTTAATGAAA--------------------------------TT--TTTTTATCGATTCAAGGGTTATTAAAAAACTCCA-------------------------------------TGTTTTG-A-------ACATC-----------------------------------------------------------------A-TGCTC--GTGGGATTSizeHit CountTotal NormTotal
No Reads
droKik1
TAAGTA-------------------------------------------------------TTTA----ATAAA-----------TGTTCGTTT-A--TT----------------TATTGTTTATAATTTATTTAT--------------------------TAAATTATT------------------TCTTC--------------------ATTTAACAA-----TT------------ATTATACATTTATA-----------TTTATTTTTACTTC-ATTATATAATTATTAATTTAATCGTTTATTTATATATTATTTTATTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-T-------TCTTT-----------------------------------------------------------------T-TATTA--TTTGTTTTSizeHit CountTotal NormTotal
No Reads
droAna3
AAGTACAAATTTTTGGTTTTTTTTTATAGTTG---------------------------------------------------------TATTT-AAAAA----------------TATTTT--ATTTTTTTTTTTT---------------------------------------------------------------------------------------AATATTC------------GATTTGTGTTCTAG-----------TTTTTTTTAATTTA-ATTTTTTCACTTT-------------------------------------------------TACT--CT--TCTTGCTTAT------------------------------------------------------------------------GTTCTTGTTTTTTTT------------------------------------------------------------TTTTA-------AATTTT--------------------------------------------AT----------TTA--------------GTT-------A--ATTTTTCCAC----------------------------------------------------------------------------TTTTTTCGAGTTTTTTTGAGTTTTCACT------------------TTTT-------------------------------------------GGTGGTCAAAAAAAATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTGTGGTATTTTT--------------------------------------------------------TTAAA-----------TATTTTTTTAAAAAT----------------ATTTTTTTGGTATTTTTTTTT---------------------------------------------------------T-----------------------------GGTTTTT----------AT--TTTG-------TAAATTTTAGTATTTTTTTTGGTAAAT-----------------------------------------------TTTGTTTTTCTTTGGTACT--TT--TGTTTGTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGTATTTTTT-TGT-------------------------------------------------------ATATTTTTTGGTATTGTTT-------TTGGT------------------TATT---------------------------------------------TATTT--GATATTTTSizeHit CountTotal NormTotal
No Reads
dp5
TGACT--------------------GCTACTGCCATCAGAA--------AATATATAAACTTTTT----TAAAA-----------AGCTCGTAT-TA---------------------------C--ATATTTGTAA-----------------------------------------------------------------------------------------TATACAAGATTTTGATA--TAAA-------AGTGA--------------------------------------------AGACCGCATTTTTGTCGTGATTTAAATTTTCGCTTATTGAAGCATACT--ACTTCGTACTATCGTGCCACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--AAAAATGGTTTCTT-GTGTAT------AACT-------A--AAATGGGC--------------------------------------------------------------------------------ACTTTGAATTTCAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAGTTTTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................TACT--ACTTCGTACTATCGTGCCACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG................................................................................................................................................................................................................................................2913.0030300000000
..........................................................................................................................................................................................................................................................................................................................TTTTGTCGTGATTTAAATTTTCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
......................................................................................................................................................................................................................................................AAA-------AGTGA--------------------------------------------AGACCGCATTTTTGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
TGACT--------------------GCTACTGCCATCAGAA--------AATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
......................................................................................................................................................................................................................................................................................................................................................TGAAGCATACT--ACTTCGTACTATCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAG.....2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTCAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAGTT...2611.0010100000000
...................................................................................................................................................................................................................................................................GA--------------------------------------------AGACCGCATTTTTGTCGTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAGTTTTC2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAGTTTTC2211.0010100000000
.............................................................................................................................................................................................................................................TTGATA--TAAA-------AGTGA--------------------------------------------AGACCGCATTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTGTAT------AACT-------A--AAATGGGC--------------------------------------------------------------------------------............................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................TTCGCTTATTGAAGCATACT--ACTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................TACT--ACTTCGTACTATCGTGCCACAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................TTGTCGTGATTTAAATTTTCGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------AACT-------A--AAATGGGC--------------------------------------------------------------------------------ACTTTGAAAA..................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................TAAA-------AGTGA--------------------------------------------AGACCGCATTTTTGTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTCAC-------TT-----------------------TG-------------------------------------------GCATTGG--CAG.....2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................TACTATCGTGCCACACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--AAAAA........................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................AAA-------AGTGA--------------------------------------------AGACCGCATTTTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
....................................................................................................................................................................................................................................................................................................................CCGCATTTTTGTCGTGATTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................AAA-------AGTGA--------------------------------------------AGACCGCATTTTTGTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................TTTTGTCGTGATTTAAATTTTCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCAC-------TT-----------------------TG-------------------------------------------GCATTGG--C.......2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................T--ACTTCGTACTATCGTGCCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................CGCTTATTGAAGCATACT--ACTTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACT-------A--AAATGGGC--------------------------------------------------------------------------------ACTTTG......................................................................................................1940.2510100000000
droPer2
ATCCCGAGATAAT---------------------------------------------------------------------------------------------------------------------TGTTAGTTATATTCCTCATCATTATTAAGCCATTTAATTGATATTCTTTTTT--TTTATTCTTTTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGCGTACTTTTTATTGGGTTATGTTTAGTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAGGAATCGC-TCAGT---TT--------------------------------------------------------------------------TTAGT------------------CATA-------------------------------------------A-TTTAA--TAAATTTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................TTTATGCGTACTTTTTATTGGGTTATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2820.501010000
........................................................................................................................................TTATATTCCTCATCATTATTAAGCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.201010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAGGAATCGC-TCAGT---T..................................................................................................................................................................2770.141010000
droWil2
TACTATTGCTT-------------------------------------------CTACGTTTTTC----TTCAT-----------ACCTTGGAA-AAAAT----------------TCTCAGATAAAATTTGTTTTT---------------------------------------------------------T--------------------ATTTTC---GAT----------------GGAA---TTTCTATGTGCTCTAAGGTGTTCTTTAATTATGATTTCTTGTTCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--ATTCCTAAAATGTTC--------------------------------------------------------------CG-GAAATATTTGTTGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--GAAGTGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................TTTC---GAT----------------GGAA---TTTCTATGTGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.4028000280
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--ATTCCTAAAA..........................................................................................................................................................................................26201.2024222000
..........................................................................................................................................................................................................................TTC---GAT----------------GGAA---TTTCTATGTGCTCTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.1523000230
......................................................................................................................................TTT---------------------------------------------------------T--------------------ATTTTC---GAT----------------GGAA---TTTCTATGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.8016000160
........................................................................................................................................................................................................................TTTTC---GAT----------------GGAA---TTTCTATGTGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.6513000130
................................................................................................................................................................................................................................................................................................................................................................TGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGAT..........................................................................................................................................................................................................................................................................................................................................................................26200.5511011000
..................................................................................................................................................................................................................................................................................TTAATTATGATTTCTTGTTCTT-------------------------------------------------GGGT--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.5010010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--ATTC................................................................................................................................................................................................25200.35707000
...................................................................................................................................................................................................................................................................................................................................................................TCATGGACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GT..........................................................................................................................................................................................................................................................................................................27200.30600060
.......................................................................................................................................................................................................................................................................................TATGATTTCTTGTTCTT-------------------------------------------------GGGT--CTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.30606000
...................................................................................................................................................................................................................................................................................TAATTATGATTTCTTGTTCTT-------------------------------------------------GGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.30600060
..........................................................................................................................................................................................................................TTC---GAT----------------GGAA---TTTCTATGTGCTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25500050
.....................................................................................................................................................................................................................................................AA---TTTCTATGTGCTCTAAGGTGTTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500050
............................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATC............................................................................................................................................................................................................................................................................................25200.20400040
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--........27200.20404000
............................................................................................................................................................................................................................................................................................TTTCTTGTTCTT-------------------------------------------------GGGT--CTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15300030
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATCT...........................................................................................................................................................................................................................................................................................25200.15300030
.....................................................................................................................................................................................................................................................................TCTAAGGTGTTCTTTAATTATGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15303000
...........................................................................................................................................................................................................................................................TTCTATGTGCTCTAAGGTGTTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15300030
..................................................................................................................................................................................................T--------------------ATTTTC---GAT----------------GGAA---TTTCTATGTGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.15303000
....................................................................................................................................................................................................................................................................................................TCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTA....................................................................................................................................................................................................................................................................................................................................................................................25200.15303000
.............................................................................................................................................................................................................................................................................................TTCTTGTTCTT-------------------------------------------------GGGT--CTGATCATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15303000
...................................................................................................................................................................................................................................................................................................TTCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................24200.15303000
...............................................................................................................................................................................................................................................................................TCTTTAATTATGATTTCTTGTTCTT-------------------------------------------------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200020
............................................................................................................................................................................................................................................................................................................................................................T--CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGA...........................................................................................................................................................................................................................................................................................................................................................................27200.10200020
...........................................................................................................................................................................................................................................................TTCTATGTGCTCTAAGGTGTTCTTTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATCT...........................................................................................................................................................................................................................................................................................23200.10202000
............................................................................................................................................................................................................................................................................................................................................................T--CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGAT..........................................................................................................................................................................................................................................................................................................................................................................28200.10201010
.........................................................................................................................................................................................................................................................................................................................................................................ACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GTGTG-------AA..............................................................................................................................................................................................................................................................................................26200.10200020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------GC----------..................................................................................................................................................................................................................................27200.10200020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------..............................................................................................................................................................................................................................................25200.10200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--GAAG....28200.10211000
....................................................................................................................................................................................................................................................................................AATTATGATTTCTTGTTCTT-------------------------------------------------GGGT--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
...................................................................................................................................................................................................................................................GGAA---TTTCTATGTGCTCTAAGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGATTT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------GC----------CT................................................................................................................................................................................................................................25200.10220000
................................................................................................................................................................................................................................................................................................................................................................TGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGA...........................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..............................................................................................................................................................................................................................................................TATGTGCTCTAAGGTGTTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--ATTCCTAAAA..........................................................................................................................................................................................28200.10202000
....................................................................................................................................................................................................................................................................................................................................................................CATGGACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------G...........................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................................................................................................................CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGA...........................................................................................................................................................................................................................................................................................................................................................................26200.05101000
....................................................................................................................................................................................................................................................................................................TCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................TAAGGTGTTCTTTAATTATGATTTCTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
....................................................................................................................................................................................................................................................................................................TCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTAC...................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
......................................................................................................................................................................................................................................................A---TTTCTATGTGCTCTAAGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTT--------------------------------------------GC----------CTT----------------------GTA--ATTCCTAAAATG........................................................................................................................................................................................24200.05100010
...................................................................................................................................................................................................................................................................................................TTCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CT.....................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................................................................................................................................TAATTATGATTTCTTGTTCTT-------------------------------------------------GGGC--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.......................................................................................................................................................................................................................................................................TAAGGTGTTCTTTAATTATGATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.......................................................................................................................................................................................................................................................................................TATGATTTCTTGTTCTT-------------------------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
..........................................................................................................................................................................................................................................................TTTCTATGTGCTCTAAGGTGTTCTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
......................................................................................................................................................................................................................................................A---TTTCTATGTGCTCTAAGGTGTTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.......................................................................................................................................................................................................................................................................................................T-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTACAG.................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGTTTGGATTT------------------------------------------------------------GTGTG-------AATA............................................................................................................................................................................................................................................................................................23200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--GAAGTGAA27200.05101000
..........................................................................................................................................................................................................................TTC---GAT----------------GGAA---TTTCTATGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--GA......26200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTC...........23200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACT..............23200.05101000
.......................................................................................................................................................................................................................................................................................................T-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTACAGT................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
..................................................................................................................................................................................................................................................................................TTAATTATGATTTCTTGTTCTT-------------------------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
....................................................................................................................................................................................................................................................................................................................................................................CATGGACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GT..........................................................................................................................................................................................................................................................................................................26200.05100010
...................................................................................................................................................................................................................................................................................................................................................................TCATGGACAT------------------------------------------------------------------------CTACAGTTTGGATTT------------------------------------------------------------GTG.........................................................................................................................................................................................................................................................................................................28200.05100010
............................................................................................................................................................................................................................................................................................................................................................T--CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGGATT.........................................................................................................................................................................................................................................................................................................................................................................29200.05101000
...................................................................................................................................................................................................................................................GGAA---TTTCTATGTGCTCTAAGGTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
....................................................................................................................................................................................................................................................................CTCTAAGGTGTTCTTTAATTATGATTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
............................................................................................................................................................................................................................................................................................................................................................T--CTGATCATGGACAT------------------------------------------------------------------------CTACAGTTTGG............................................................................................................................................................................................................................................................................................................................................................................26200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--ATTCCTA.............................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................TTC---GAT----------------GGAA---TTTCTATGTGCTCTAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100010
.............................................................................................................................................................................................................................................................................................TTCTTGTTCTT-------------------------------------------------GGGT--CTGATCATGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
...........................................................................................................................................................................................................................................................................GTGTTCTTTAATTATGATTTCTTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..........................................................................................................................................................................................................................................................TTTCTATGTGCTCTAAGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTC...........26200.05101000
..........................................................................................................................................................................................................................TTC---GAT----------------GGAA---TTTCTATGTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
...........................................................................................................................................................................................................................................................................GTGTTCTTTAATTATGATTTCTTGTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
...........................................................................................................................................................................................................................................................TTCTATGTGCTCTAAGGTGTTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100
...................................................................................................................................................................................................................................................................................................................................................................TCATGGACAT------------------------------------------------------------------------CTACAGTTTGGAT..........................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...........................................................................................................................................................................................................................................................TTCTATGTGCTCTAAGGTGTTCTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
..................................................................................................................................................................................................................................................................TGCTCTAAGGTGTTCTTTAATTATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
........................................................................................................................................T---------------------------------------------------------T--------------------ATTTTC---GAT----------------GGAA---TTTCTATGTGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
...........................................................................................................................................................................................................................................................TTCTATGTGCTCTAAGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.................................................................................................................................................................................................................................................................................................TGTTCTT-------------------------------------------------GGGT--CTGATCATGGACAT------------------------------------------------------------------------CTA....................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.......................................................................................................................................TT---------------------------------------------------------T--------------------ATTTTC---GAT----------------GGAA---TTTCTATGTGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
..................................................................................................................................................................................................................................................................TGCTCTAAGGTGTTCTTTAATTATGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------GTGTG-------AATCTT--------------------------------------------GC----------CTT----------------------GTA--AA..................................................................................................................................................................................................23200.05100010
...................................................................................................................................................................................................................................................................................TAATTATGATTTCTTGTTCTT-------------------------------------------------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
...........................................................................................................................................................................................................................................................TTCTATGTGCTCTAAGGTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................TTTC---GAT----------------GGAA---TTTCTATGTGCTCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTTCCC--------CATG-------------------AT--------------------------------------------ACTTTCG--G.......25200.05100010
droVir3
AAGTTCA--------------------------------------------------------TG----TTAAA-----------AAATTCTTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAGGAATACG--------------------------------------------------ACCCAATTTAAAAATAATTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT---CGCCTTTGCT--GATATATAATTTCCCATTTCCCC-C-------AAATCTGCCTGCCAATAATAATCGATTCCTATCATAATAACCCTTCTACGCTCAAAATTGTTTCGCGCTGG-TCTAT--CCAATGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................TTCTTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC........................................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000011000000000000000000000000000000000
........................................................................................TTCTTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000000000000000001000000000000000000000000000000000
...........................................................................................TTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................TT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAG....................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
...........................................................................................TTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................TT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATATAATTTCCCATTTCCCC-C-------AAA....................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................TCTTT-T----------------------CCATCATGGGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
........................................................................................TTCTTT-T----------------------CCATCATGGGTTTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
...............................................................................................T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT.......................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................TT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG.......................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000001000000000000000000000000000000000000000
........................................................................................TTCTTT-T----------------------CCATCATGGGTTTGTAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................TCTTT-T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................T----------------------CCATCATGGGTTTGTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAGGA..................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCATAATAACCCTTCTACGCTCA.................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---CGCCTTTGCT--GATATATAATTTCCCA.......................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................TTCTTT-T----------------------CCATCATGGGTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
...TTCA--------------------------------------------------------TG----TTAAA-----------AAATTCTTT-T----------------------CCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251000000000000000000000000100000000000000000000000000000000000000
droMoj3
ACAAACGGACTGTTGGACAATGACTGCGATTC----GAGCAAGTATCAGAATCTGTAAGTTATCC----GCACG-----------A-TCCAA--------------------------------------------------------------------------------------------------------------------------------ATGA-----AT------------AACATATGTACATA-----------TGTAGCCTTTACTT-GTTAGACAA--------TTGATCGCTTACAAAAATAGTATTTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATTGAAATTTATGACGGAA----------------------TGAATGTC----------------------------------------ACTTCTA--TAAGTGTGTGTGCAGAAGCCAC-GAATGGTTTTA--------------------------CA--------ATT--AG-ATTATAAT----------TTTC-------GTAGA-------------------------------------------------------------------ATTCC--AACAGTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................AATGACTGCGATTC----GAGCAAGTATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
droGri2
GAACC-------------------------------AAACAAGTGCCAGTTCTA----------T----GTATGTATCTATGTATAATCAAAAT-AAACC----------------TCTCGCCAATTACTTTTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATACGATGTATGTAAACAACATATTCAAATTACCT-GCATTCTTA------------TTT------------------------------------------------------------------------------------------GTTCCTATGAAATCGT-CTCGCAATTTATACATCATAGATGACTTTTT---------------------------------------------------------------------------------------------------------------------------T-CCTTT--AAAGCTCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 04:43 PM