ID:dsi_19584 |
Coordinate:3r:10192610-10192667 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3r_10192129_10192609_-]; exon [3r_10192036_10192609_-]; CDS [3r_10192668_10194085_-]; exon [3r_10192668_10194178_-]; intron [3r_10192610_10192667_-]
No Repeatable elements found
| ##################################################----------------------------------------------------------################################################## TACGTCCAGGGACTGCACGCGTTTCACAAAAACAGCTTCCACGAGGCAAAGTTAGTCACCTTAAGCCTAGACTCTAGAATGTATACTGATAATCTTTATTCTTTGCAGACGCTTTCTGCGTGAAACTCTGAAAATGGCCAACGCCGAAGACCTCAACC **************************************************..............((..(((....(((.(((......))).)))....)))..))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................TAACAAAGAAAGCTTCCACGAG................................................................................................................. | 22 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...........ACTGCCCGCGTTTCAC................................................................................................................................... | 16 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................................TTCTGCGTGAAACTCTGAAAATGGC.................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................GCTTTCTGCGTGAAACTCTGAAAA........................ | 24 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................CGGCGTGAAACTCTGAAAATGGCC................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................AACGCTTTCTGCGTGAAACTCTGAAAATGGC.................... | 31 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................TCAGCGTGTAACTCTAAAAA........................ | 20 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 |
| .......................................................................CTCTTGAATGTATCCTGA..................................................................... | 18 | 2 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 |
|
ATGCAGGTCCCTGACGTGCGCAAAGTGTTTTTGTCGAAGGTGCTCCGTTTCAATCAGTGGAATTCGGATCTGAGATCTTACATATGACTATTAGAAATAAGAAACGTCTGCGAAAGACGCACTTTGAGACTTTTACCGGTTGCGGCTTCTGGAGTTGG
**************************************************..............((..(((....(((.(((......))).)))....)))..))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| ..GCAGGTCCCTGACGTACGAAA....................................................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ....................CAAAGTGTTTTTGTCGAAGGT..................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............CGTGCGCAAAGTGTTTTTGTC........................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGAGAAACGTCTGCGAAAGAC........................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .....CGTACCTGACGTGCGCAA....................................................................................................................................... | 18 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .........................................................................................................................................GCTTGCGGCTTCTGCAG.... | 17 | 2 | 13 | 0.15 | 2 | 0 | 0 | 2 |
| .................................................................................................................AAGATGGACTTTGAGAC............................ | 17 | 2 | 17 | 0.12 | 2 | 0 | 2 | 0 |
| ..............................................GTTTCAATCAGAGGCAT............................................................................................... | 17 | 2 | 10 | 0.10 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:36 AM