ID:

dsi_19581

 Coordinate:

2r:13963590-13963739 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.0 -6.8 -6.4

Flybase annnotation

CDS [2r_13963740_13964041_+]; exon [2r_13963740_13964041_+]; intron [2r_13961787_13963739_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CACGTTCTGTAATCTACTCTTTCGTACATATACAAATATTTAAAATTATTATGAAATTAATCAGTGCTCGGTGATAAAAATGTTATCTCATGGCTAATCACTGAATTCCAATAATTTTACTTGTGGCTAACGTCATCGTTAAATGGTGGGAGTGTAGAACTTGATAATCGCCAACTAATCTATATACGTACTATTTGCAGCGATGACCGTTCGGATGTCACCGAGCAACTCTACGTGGATCCGTATGCCG
***************************************************************************************************************...((((((.....(((..((((((......))))))..)))))))))............******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR902009
testis
 M023
head
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
........................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTT....................................... 27 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATGTCACCGAGCAACTCTACGTGGA........... 25 0 1 2.00 2 0 0 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTTC...................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................TTATGAAATTAATCAGTGCTCGGT.................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TCATCGTTAAATGGTGGGAGTGTTGAAC.......................................................................................... 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGCAGCGATGACCGTTCGGATGTCAC............................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGGGAGTGTAGAACTTGATAATCGC............................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TAATTTTACTTGTGGCTAACGTCA................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................TGCTCGGTGATAAAAATGTTA..................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGT........................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TTACTTGTGGCTAACGTCATCGTTAA............................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................TTAATCAGTGCTCGGTGATAAAAATGT....................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................ATAAAAATGTTATCTCATGGCTAATC....................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TATTTGCAGCGATGACCGTTCGGATGT................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GATGACCGTTCGGATGTCACCGG.......................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................CACATCGATGACCGTTCGGATGTCACCG........................... 28 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................TATGAAATTAATCAGTGCTCGGTGAAA.............................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CACCGAGCAACTCTACGTGGATCCGTA..... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................TTATGAAATTAATCAGTGCTCGGTG................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGATAATCGACAACTAATCTATATAAA.............................................................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTCACCGAGCAACTCTACGTGGA........... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................TATATACGTACTATTTGCAGCGATGAC........................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................TCAGTGCTCGGTGATAAAAATGTTAA.................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................TATGAAATTAATCAGTGCTCGG................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TATACGTACTATTTGCAGCGATGACCGT........................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTATTTGCAGCGATGACCGTTCGGAT.................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGCAGCGATGACCGTTCGGATGTC............................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................TATTATGAAATTAATCAGTGCTC..................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TATTTGCAGCGATGACCGTTCGGATG................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GTGTAGAACTTGATAATCGCC.............................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTA....................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CACATCGATGACCGTTCGGATGTCACC............................ 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................TAGGAACTTAATCCGTGCTC..................................................................................................................................................................................... 20 3 6 0.50 3 0 0 0 0 3 0 0 0 0 0 0
...............................................................................................................................................TGGTGGGAGTGTAAAA........................................................................................... 16 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTAAATGGTGGGAGA................................................................................................. 15 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................TAAATGGTCGTACTGTAGA............................................................................................ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTGCAAGACATTAGATGAGAAAGCATGTATATGTTTATAAATTTTAATAATACTTTAATTAGTCACGAGCCACTATTTTTACAATAGAGTACCGATTAGTGACTTAAGGTTATTAAAATGAACACCGATTGCAGTAGCAATTTACCACCCTCACATCTTGAACTATTAGCGGTTGATTAGATATATGCATGATAAACGTCGCTACTGGCAAGCCTACAGTGGCTCGTTGAGATGCACCTAGGCATACGGC
*******************************************************************************...((((((.....(((..((((((......))))))..)))))))))............*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR1275483
Male prepupae		 SRR1275487
Male larvae
..............................................................................................................................................TAGCAGCCTGACATCTTGAA........................................................................................ 20 3 5 136.00 680 580 100 0 0 0 0 0 0 0 0 0 0
..GCAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 26 0 1 78.00 78 17 61 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAGCCTGACATCTTGA......................................................................................... 19 3 20 48.55 971 927 0 24 8 0 0 6 3 0 1 1 1
..............................................................................................................................................TAGCAGCCTGACATCTTGAAC....................................................................................... 21 3 2 33.00 66 51 15 0 0 0 0 0 0 0 0 0 0
...CAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 25 0 1 19.00 19 4 15 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGCAGCCTGACATCTTGAA........................................................................................ 19 3 15 17.60 264 229 34 0 0 0 0 1 0 0 0 0 0
..ACAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 26 1 1 12.00 12 1 11 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTAGCAGCCTCACATCTTGA......................................................................................... 20 3 1 9.00 9 8 1 0 0 0 0 0 0 0 0 0 0
...CAAGACATTAGATGAGAAAGCATGTAT............................................................................................................................................................................................................................ 27 0 1 8.00 8 2 6 0 0 0 0 0 0 0 0 0 0
.AACAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 27 2 1 8.00 8 0 8 0 0 0 0 0 0 0 0 0 0
....AAGACATTAGATGAGAAAGCATGTAT............................................................................................................................................................................................................................ 26 0 1 7.00 7 3 4 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTACCAGCCTGACATCTTGA......................................................................................... 20 3 6 6.67 40 32 8 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTAGCAGCCTGACATCTTGAA........................................................................................ 21 3 4 6.50 26 21 5 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GCAGCCTGACATCTTGAA........................................................................................ 18 3 20 5.90 118 100 18 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTAGCAGCCTGACATCTTGA......................................................................................... 20 3 6 5.83 35 28 6 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................GCAGCCTGACATCTTGAACTA..................................................................................... 21 3 2 5.50 11 9 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGCAGCCTGACATCTTGAACTA..................................................................................... 22 3 2 5.50 11 8 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCCTGACATCTTGAA........................................................................................ 17 2 8 4.75 38 36 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................GGAGTACCGATTAGGCACTTA................................................................................................................................................ 21 3 3 3.33 10 0 0 8 2 0 0 0 0 0 0 0 0
GTGCAAGACATTAGATGAGAAAGCAT................................................................................................................................................................................................................................ 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.....AGACATTAGATGAGAAAGCATGTAT............................................................................................................................................................................................................................ 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTAGCAGCCTCACATCTTG.......................................................................................... 19 3 6 2.17 13 10 2 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TACCAGCCTGACATCTTG.......................................................................................... 18 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTAGCAGCCTCACATCTTGAA........................................................................................ 21 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGCAGCCTGACATCTTGAACT...................................................................................... 21 3 2 2.00 4 3 1 0 0 0 0 0 0 0 0 0 0
GTGCAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..AAAAGACATTAGATGAGAAAGCATGTAT............................................................................................................................................................................................................................ 28 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.TGCAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....AAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ATTTAGCAGCCTGACATCTTGAA........................................................................................ 23 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAGCCTGACATCTTGAACT...................................................................................... 22 3 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.....AGACATTAGATGAGAAAGCATGTATAT.......................................................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.AGCAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 27 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACAGCCTGACATCTTGAACTA..................................................................................... 22 3 2 1.50 3 2 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCCTGACATCTTGAAC....................................................................................... 18 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTACCAGCCTGACATCTTGAA........................................................................................ 21 3 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGCAGCCTGACATCTTGAAC....................................................................................... 20 3 6 1.33 8 8 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AACTTAGCAGCCTCACATCTTGAA........................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAGCCTCACATCTTGAAA....................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...AAAGACATTAGATGAGAAAGCATGTA............................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACCAGCCTGACATCTTGAA........................................................................................ 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCACCCTGACATCTTGA......................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TACCAGCCTGACATCTTGA......................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCCTGACATCTTGAACTAG.................................................................................... 21 3 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTCGCTACTGGCAAGCCTACAG............................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...CAAGACATTAGAGGAGAAAGCATGT.............................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ATTTAGCAGCCTGACATCTTGA......................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..AAAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..ACGAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTAGCAGCCTGACATCTTGAAC....................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..GCAAGACATTAGAAGAGAAAGCATGT.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......ACATTAGATGAGAAAGCATGTAT............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..GCAAGAAATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..GCAAGACATTAGATGAGAAAGCATG............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...CGAGACATTAGATGAGAAAGCATGTAT............................................................................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...TAAGACATTAGATGAGAAAGCATGT.............................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TACCAGCCTGACATCTTGAA........................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCCTGACATCTTGAACT...................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACCAGCCTGACATCTTGAACTAA.................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTAGCACCCTGACATCTTGAA........................................................................................ 21 3 5 1.00 5 4 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTACCAGCCTGACATCTTG.......................................................................................... 19 3 20 0.65 13 11 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAGCCTCACATCTTGAACA...................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................ACAGCCTGACATCTTGAACTA..................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCCTGACATCTTGAACTAA.................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CTAGCACCCTGACATCTTGA......................................................................................... 20 3 10 0.50 5 4 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CCTGACATCTTGAACTAGCAG................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATAGCACCCTGACATCTTGAA........................................................................................ 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................AGTACCGATTAGGCACTTACG.............................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................CGGTTGAGTAGATATAGGAAT............................................................ 21 3 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGCAGCCTCACATCTTG.......................................................................................... 17 2 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................GCAGCCTGACATCTTGAAC....................................................................................... 19 3 14 0.36 5 5 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACCAGCCTTACATCTTGA......................................................................................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CCAGCCTGACATCTTGAA........................................................................................ 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACCAGCCTGACATCTTGA......................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAACCTGACATCTTGAAC....................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCCTGACATCTTGAACA...................................................................................... 19 3 14 0.21 3 2 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCACCCTGACATCTTGAG........................................................................................ 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TATCAGCCTGACATCTTGAA........................................................................................ 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTATCAGCCTGACATCTTGA......................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCACCTTGACATCTTGAA........................................................................................ 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAGCCTTACATCTTGAA........................................................................................ 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
..........TTTGATGAGAAAGCA................................................................................................................................................................................................................................. 15 1 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................ATTTAGCAGCCTGACATCT............................................................................................ 19 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATAGCACCCTGACATCTTGA......................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GCACCCTGACATCTTGA......................................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................TCAATTAGTCACGAG..................................................................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................CACAGCTTGCAGTAGGAAT............................................................................................................. 19 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................CCAGCCTGACATCTTGA......................................................................................... 17 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAACCTGACATCTTGAA........................................................................................ 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGCAGCCTCACATCTTGAG........................................................................................ 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGCAGCCTAACATCTTGAA........................................................................................ 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TACCAGCCTGACATCTTGAG........................................................................................ 20 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATACCAGCCTGACATCTTG.......................................................................................... 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATCAGCCTGACATCTTGAA........................................................................................ 19 3 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACAAGCCTGACATCTTGAA........................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGTAGCAGCCTCACATCT............................................................................................ 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CCAGCCTGACATCTTG.......................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CCCCCCCTGACATCTTGA......................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:13963540-13963789 + dsi_19581 CACG------------------------------TTCTGTA-----ATCTAC--TCTTTC----GTACAT---------------------------------------------------------------------ATACAAATATTTAAAATTATTATGAAATTAATCAGTGCTC-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTGAATTCCAATAATTTTACTTGT----GGC--------TAACGTCATCGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GCCAACTAATCTAT----ATACGTACTATTTGCAGCGATGACCGTT------CGGATGTCACCGAGCAACTCTACGTGGATCCGTATGCCG
droSec2 scaffold_1:10812225-10812474 + CACG------------------------------TTCTGTA-----ATCTAC--TCTTTC----GTACAT---------------------------------------------------------------------ATACAAATATTTAAAATTATTATGAAATTAATCAGTGCTC-----GGTGA--TA-AAAATGTTATCTTA-----TGGCTAAT--CACTGAATTCCAATAATTTTACTTGT----GGC--------TAACGTCATCGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GCCAACTAATCTAT----ATACGTACTATTTGCAGCGATGACCGTT------CGGATGTCACCGAGCAACTCTACGTGGATCCGTATGCCG
dm3 chr2R:13310961-13311216 + CACG------------------------------TTCTGTA-----ATCTAC--TCTTTC----GTACAT---------------------------------------------------------------------ATCAAAATATTTAAAATTATTATGAAATTAATCAGTGCTA-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTGAATTCCAATTATTTTACTTGT----GGC--------TAACGTCATCGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GCCAACTAATCTAT----ATACGTACTATTTGCAGCGATGACCGTTCACTCTCGGATGTCACAGAGCAACTCTATGTGGATCCGTATGCCG
droEre2 scaffold_4845:12538964-12539198 - CAAG------------------------------TTCTGTA-----ATCTAC--TCCTCC----GTACAT---------------------------------------------------------------------AACAAAATATTTAAAATTATTATGCAATTAATCAGTGCTC-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTAAATTCCAATCATTATACTCGT----AGC--------TAACGTCATCGTTAAAT--------T-GT-----------------------------------------------------------------------GATAATC--GCTAACTAATCTGT----ATATGTACTTTTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCGTATTCCG
droYak3 2R:18157000-18157256 - CAAG------------------------------TTCAGTA-----ATCTAC--TCTTCC----GTACAT---------------------------------------------------------------------GTAAAAATATATGAAATT---ATGCAATTAATCAGTGCTA-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTGAATTCCAATTATTTTACTTGT----CGC--------TAACGTCATCGTTAAATGGTAGAATG-GTGGGA------------GTGTAGA----------------------------ACCT----------------GATAATC--GCCAACTAATCTGTG--TGTGTGTACTATTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCATATGCCG
droEug1 scf7180000409672:1800166-1800413 - CAAT------------------------------GTCGCTA-----ATCTAT--ATTTCT----GTATTT---------------------------------------------------------------------AAACAAGTATCTAAAATGATTGTGAAATTAATCAGTTGAG-----GGCGA--TA-AAAACGTTATC--G-----TGGCTAAT--CACTGAATTCCACTTATTTTAGTCGT----ATTTT------CAACGTCATCATTATAT--------G-GTCATA------------GTTTAGA----------------------------TTTT----------------AGTAATC--GCTAACTAATCTTTG--T--A--TAACATTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCATACGCCG
droBia1 scf7180000301754:5562834-5563083 + CTCA------------------------------AACAGTA-----ATCTAT--ACT-AT----GTACTT---------------------------------------------------------------------CTGAAAATAGTTAATGTTATTGTGAAATTAATCAGTGGTC-----GGTGA--TA-AAAACCTTATC--G-----TGGCTAAT--CACTGCGTTCCACTAGTTTTAGTCAT----ATTC-------TAACGTCATCGTTATAT--------G-GTGGGA------------GCTTAGA----------------------------ATTC----------------GGCACGC--GGCAACTAATCTGTG--TGTACATACCATTTGCAGCGATGACCGGT------CGGACGCCACTGAGCCCCTCTACGTGGATCCCTATGCCG
droTak1 scf7180000415345:383445-383699 + CAAA------------------------------ATTGGTA-----ATCTAT--ACTTCT----GTACCC---------------------------------------------------------------------GT-AAAATACTTAAAATTATTGTGAAATTAATCAGTGGTCTGGTCGGTGA--TAAAAAACCTTATC--G-----TGGCTAAT--CACTGAATTCCACTTAATTTATTCGT----ACT--------CAACGTCATCGTTATAT--------G-GTGGTA------------GTTAAGA----------------------------ATTC----------------GGTAAGC--GTTAACTAATCTATG--TACACATACTATTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCATATGCCG
droEle1 scf7180000491214:989485-989736 - CAAA------------------------------ATCAGTA-----CTCCGT--ATTTCT----GTACCG---------------------------------------------------------------------TCCAAAATATTTTAAATTATTGTGAAGTTAATCAGTGACC-----GGTGA--TA-AAAGCGTTATC--GCGGCTTGGCTAAT--CACAGAATTCCATTTATTTTAGTTGA----ACT--------CAACGTCATTGTT---T--------G-GTGGGA------------GATTAAA----------------------------ATTC----------------GGTAATT--GCCAACTAATCTAGG--TACATACACTCATTGCAGCGATGACCGTT------CTGATGTCACTGAGCCACTCTACGTGGATCCATATGCCG
droRho1 scf7180000776786:23196-23445 + CAAA------------------------------ATCAGTA-----TTCTTG--TTTCCT----GTACCC---------------------------------------------------------------------ATACGTTAATTTGAAATTATTATGAAATTAATCAGTGGTC-----GGTGA--AA-AAAACGTTATC--G-----TGTCTAAT--CACCGAATTCCATTTATTTTGATTTA----ATT--------CAACGTCATTGTTATTT--------G-GTGGGA------------GTGTAGA----------------------------ATTT----------------GGTAATC--GCCAACTAATCTGGG--TATATACACTAATTGCAGCGATGACCGTT------CCGATGCCACTGAGCCGCTCTACGTGGATCCATATGCCG
droFic1 scf7180000453948:2133026-2133281 - CATA----------TACGAA-----------------GGTA-----ATCTTA--ACCTATTTTTTTACCT---------------------------------------------------------------------A-AAAAATAGTTGAAATTATTGTGAAATTAATCAGTGCTC-----GGTGA--TA-AAAACGTTATC--G-----TGGCTAAT--CGCTGAGTTCCGCCTATTTTAGTCGT----ACT--------TAACGTCATCGTTATAT--------T-GTTGGA------------ATGTGGA----------------------------ATTT----------------GGTAATC--GCCAACTAATCTGTA--TATATGTACTATTTGCAGCGATGAACGTT------CTGATGTCACTGAGCAGCTGTACGTGGATCCGTATGCCG
droKik1 scf7180000302411:414776-415095 + CAAC-A--------AAGGAA-----GGAAATCCGTTCCGTA-----GTGTATATTTCTTT----GTGACC---------------------------------------------------------------------ATGTTTATTTTTGAAATTATTGTGAAATTAATCAGTGGCC-G---GTCGACTTA-TCAACGTTATCTTG-----TGGCTAAT--CACTGAATTCCGAATACTTTTGTCGT----AGCTTTAAACCCAACGTCATTGTTATTC--------G-GTGGGGGGAGTATAAATAGTATAGAAAAGGTGCGCCG-----------------CCGCTCGTATCT-CTGAC-ACTAATT--GCCAACTAATCCTTGGCCTGATTTACTATTTGCAGCGATGACCGGT------CAGATGTCACGGAACAGCTTTATGTGGATCCATACGCTG
droAna3 scaffold_13266:8805725-8806014 + CACACAATGTAACTACCAAAAGAAATTAAATCCA-----TACATATGTATATAT------------------TTATAGTGT------------GAC-------------------------------------------GA-AAGAAATCAAAAATTATTGCAAAATTAATCAGAGCTT-----GGTGA--TA-A-AACGTTATC--G-----TGGCTAAC--CACTGAACTCCTAA---ATA-ATATA----ACT--------ATACGTCACTGCTGATA--------G-ATGGGG------------GCGTAGA----------------------------ATTGGCCATATCTTCTAACTGGTAATCTTGTCAACTAATCTG-----ACAT-TTCTACTTGCAGCGATGATCGCT------CGGATGTCACGGAACAGCTGTATGTGGATCCATATGCCG
droBip1 scf7180000395994:31048-31337 - CACA--ATGTAACT-ACCAAAGAAATCAAATATA-----TATATATATATATAT------------------TAATAGTTTAATAGATGG----------------------------------------------------------CACAAAATTATTGCGAAAGTAATCAATGCTT-----GGTGA--TA-A-AACGTTATC--G-----TGGCTAACACAACCCAATTCCCAATATATA-ATATA----AGT--------ATACGTCACTGCTGATG--------G-ATGGGG------------GCGTAGA----------------------------ACTGGCCATATCTTGTTACCGCCAATCTTGCCAACTAATCT-T----ATAT-TTCTACTTGCAGCGATGATCGCT------CGGATGTCACGGAACAGCTGTATGTGGATCCCTATGCCG
dp5 3:4773771-4774095 + GAAG-----------------TAC------------ATATA-----ATCTAG--ATGTAT----ATACAAACAAATAACCTTGCTGATTTTGTAATGAAAGCCCGAGATTAATAAATTTTTGTACCCATTTTTGTGCCCCT--------------------------ACAATGGAGGTG-----GGTGTACGA-CCAACCTTATC--G-----TTGTTAAT--CACTGAATTCCAAACCTTTTGGCCACACGTATTAT-AAA-TA------AACATTGTCT--------GTGTGGGC------------TCTCGG-----------CGGCGCTGGGGACAGGGGACTGATCACAATACTTGAC-----ATAGTGCTAACGA-TGATT----ATA---AATCTTTGCAGCGATGATCGTT------CCGATGTGACAGAGCCGCTCTACGTCGATCCCTATGCGG
droPer2 scaffold_2:4968012-4968068 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCGATGATCGTT------CCGATGTGACAGAACCGCTCTACGTCGATCCCTATGCGG
droWil2 scf2_1100000004513:4555239-4555292 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTGACGATCGCT------CCGATGTAACAGAACAGCTTTATATTGATCCTGGGGC--
droVir3 scaffold_12875:12860676-12860724 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCGACGATCGCT------CAGATGTAACTGAACCGCTCTACATTGATCC--------
droMoj3 scaffold_6496:20122789-20122845 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTACT-CTTACAGCGATGATCGCT------CAGATGCTACCGAGCCAATCTTTATTGATGCC-------
droGri2 scaffold_15245:7508769-7508814 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGACGATCGGT------CGGATGCAACAGAACCGATATTTATTGA------TGCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACG------------------------------TTCTGTA-----ATCTAC--TCTTTC----GTACAT---------------------------------------------------------------------ATACAAATATTTAAAATTATTATGAAATTAATCAGTGCTC-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTGAATTCCAATAATTTTACTTGT----GGC--------TAACGTCATCGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GCCAACTAATCTAT----ATACGTACTATTTGCAGCGATGACCGTT------CGGATGTCACCGAGCAACTCTACGTGGATCCGTATGCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTT------.......................................27111.0011000000000000110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCACCGAGCAACTCTACGTGGA...........2512.00200010010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTT------C......................................2812.00200000000000020000
..............................................................................................................................................................TTATGAAATTAATCAGTGCTC-----GGT.....................................................................................................................................................................................................................................................................................2412.00200000000000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGATGACCGTT------CGGATGTCAC.............................2612.00200000000000020000
....................................................................................................................................................................................................................................................................................................TGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GC.........................................................................................2511.00100000000001000000
............................................................................................................................................................................................................................................TAATTTTACTTGT----GGC--------TAACGTCA................................................................................................................................................................................................2411.00100000000000010000
..............................................................................................................................................................................TGCTC-----GGTGA--TA-AAAATGTTA.....................................................................................................................................................................................................................................................................2111.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGT..............................................2611.00100000000000010000
.................................................................................................................................................................................................................................................TTACTTGT----GGC--------TAACGTCATCGTTAA.........................................................................................................................................................................................2611.00100000000000001000
......................................................................................................................................................................TTAATCAGTGCTC-----GGTGA--TA-AAAATGT.......................................................................................................................................................................................................................................................................2711.00100000000001000000
............................................................................................................................................................................................A--TA-AAAATGTTATCTCA-----TGGCTAAT--C................................................................................................................................................................................................................................................2611.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TATTTGCAGCGATGACCGTT------CGGATGT................................2711.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTT------CGGATGTCACCGG..........................2311.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAGCAACTCTACGTGGATCCGTA.....2711.00100000000000010000
..............................................................................................................................................................TTATGAAATTAATCAGTGCTC-----GGTG....................................................................................................................................................................................................................................................................................2511.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACCGAGCAACTCTACGTGGA...........2411.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................TAT----ATACGTACTATTTGCAGCGATGAC.................................................2711.00100000000000010000
..........................................................................................................................................................................TCAGTGCTC-----GGTGA--TA-AAAATGTTAA....................................................................................................................................................................................................................................................................2611.00100000000000001000
...............................................................................................................................................................TATGAAATTAATCAGTGCTC-----GG......................................................................................................................................................................................................................................................................................2211.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................T----ATACGTACTATTTGCAGCGATGACCGT..............................................2811.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTATTTGCAGCGATGACCGTT------CGGAT..................................2611.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCGATGACCGTT------CGGATGTC...............................2511.00100000000000010000
............................................................................................................................................................TATTATGAAATTAATCAGTGCTC-----........................................................................................................................................................................................................................................................................................2311.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TATTTGCAGCGATGACCGTT------CGGATG.................................2611.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................GTGTAGA----------------------------ACTT----------------GATAATC--GCC........................................................................................2111.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTA------.......................................2711.00100000000000010000
...................................................................................................................................................................................................................................................................................TTAAAT--------G-GTGGGA------------GA.........................................................................................................................................................1580.13100000000010000000
droSec2
CACG------------------------------TTCTGTA-----ATCTAC--TCTTTC----GTACAT---------------------------------------------------------------------ATACAAATATTTAAAATTATTATGAAATTAATCAGTGCTC-----GGTGA--TA-AAAATGTTATCTTA-----TGGCTAAT--CACTGAATTCCAATAATTTTACTTGT----GGC--------TAACGTCATCGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GCCAACTAATCTAT----ATACGTACTATTTGCAGCGATGACCGTT------CGGATGTCACCGAGCAACTCTACGTGGATCCGTATGCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTT------CGGATGTCACCGA..........................2012.0020110
................................................................................................................................................................ATGAAATTAATCAGTGCTC-----GGTGA--T................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGACCGTT------CGGATGTCACCGAGT........................2311.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTCTACGTGGATCCGT......2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCGTT------CGGATGTCACCGA..........................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCGTT------CGGATGTCACCGAGC........................2411.0010010
dm3
CACG------------------------------TTCTGTA-----ATCTAC--TCTTTC----GTACAT---------------------------------------------------------------------ATCAAAATATTTAAAATTATTATGAAATTAATCAGTGCTA-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTGAATTCCAATTATTTTACTTGT----GGC--------TAACGTCATCGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GCCAACTAATCTAT----ATACGTACTATTTGCAGCGATGACCGTTCACTCTCGGATGTCACAGAGCAACTCTATGTGGATCCGTATGCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGATGTCACAGAGCAACTCTA.................25115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000100000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000010002310000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACAGAGCAACTCTATGTGGA...........2419.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000003000000000001000100000000000000200000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCTCGGATGTCACAGAGCAAC.....................2517.0070000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGGATGTCACAGAGCAACT....................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCACAGAGCAACTCTATGTGGA...........2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGCAACTCTATGTGGATCCGTA.....2715.0050000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGGATGTCACAGAGCAACTCT..................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGCAACTCTATGTGGATCCGT......2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCTCGGATGTCACAGAGCAACTC...................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACTCTATGTGGATCCGTATGCC.2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGATGTCACAGAGCAACTCTATGT..............2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACAGAGCAACTCTATGTGGATC.........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGACCGTTCACTCTCGGATGTCACAGA..........................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCTCGGATGTCACAGAGCAACTC...................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGATGTCACAGAGCAACTCTATG...............2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGATGTCACAGAGCAACTCTATG...............2714.0040000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTATGTGGATCCGTATGC..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGATGTCACAGAGCAACTCTA.................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTTCACTCTCGGATGTCACAGAGC........................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGAAATTAATCAGTGCTA-----GG......................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGAGCAACTCTATGTGGATCCGTA.....2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACTCTCGGATGTCACAG...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGCAACTCTATGTGGATCCGTATGC..2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGGATGTCACAGAGCAACT....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGATGTCACAGAGCAACTCTATGTG.............2812.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCTCGGATGTCACAGAGCAACTCT..................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCGGATGTCACAGAGCAACTCT..................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGATGTCACAGAGCAACT....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCTCGGATGTCACAGAGCAAC.....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACTCTATGTGGATCCGTATGC..2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGCAACTCTATGTGGATCC........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGACCGTTCACTCTCGGATGT................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AGTGCTA-----GGTGA--TA-AAAATG........................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGGATGTCACAGAGCAACTC...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGTTAAAT--------G-GTGGGA------------GTG........................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCGGATGTCACAGAGCAACTCTA.................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCGTTCACTCTCGGATGTCG..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGAAATTAATCAGTGCTA-----GGT.....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GGGA------------GTGTAGA----------------------------ACTT----------------GATAAT..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................TCATCGTTAAAT--------G-GTGGGA------------GTGTA......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGATGTCACAGAGCAACTCTATGT..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GGA------------GTGTAGA----------------------------ACTT----------------GATAATC--GC.........................................................................................2311.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCGTTCACTCTCGGA...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACGTACTATTTGCAGCGATGACCGTT.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTTCACTCTCG.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTTCACTCTCGG....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTTCACTCTCGGATGTCAC.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................T--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GAT.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................AT--------G-GTGGGA------------GTGTAGA----------------------------AC......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAACTCTATGTGGATC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCACAGAGCAACTCTATGTGGA...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACTCTATGTGGATCCGTATG...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGATGTCACAGAGCAAC.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................T--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------....................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCACAGAGCAACTCTATGTGGATC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TAATCTAT----ATACGTACTATTTGCAG........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCACAGAGCAACTCTATGTGGAT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGATGTCACAGAGCAACTC...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCGGATGTCACAGA..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACAGAGCAACTCTATGTGGATCCG.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGTTAAAT--------G-GTGGGA------------GTGTA......................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTTCACTCTCGGATGTCA..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ATCAGTGCTA-----GGTGA--TA-AAAATG........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGAGCAACTCTATGTGGATC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTCTATGTGGATCCGTAG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCTCGGATGTCACAGAGCAACTCT..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TTAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------GA..................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGGATGTCACAGAGCAACTCTA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGAGCAACTCTATGTGGA...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTTCACTCTCGGATGTC...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTTCACTCTCGGATGTCACAGAGC........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGCAACTCTATGTGGATCC........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCTCGGATGTCACAG...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTTAAAT--------G-GTGGGA------------GTGT.......................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACTTGT----GGC--------TAACGTCATCGT............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGAGCAACTCTATGTGGATCCGT......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGGATGTCACAGAGCAACTCT..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCGGATGTCACAGAGCA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGCAACTCTATGTGGATCCGTAT....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACTCTATGTGGATCCGTATGC..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGTTAAAT--------G-GTGGGA------------GTGTAGA----------------------------A.......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGATGTCACAGAGCAAC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTCGGATGTCACAGAGCAAC.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGACCGTTCACTCTCGGATGTCACA............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCACAGAGCAACTCTATG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGCAACTCTATGTGGATCCG.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCTCGGATGTCACAGAGCA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTTCACTCTCGGATG.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCGTTCACTCTCGGATGT................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGTGGATCCGTATGCCG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAACTCTATGTGGATCCGTATGCC.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGAGCAACTCTATGTGGATCC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................ATCGTTAAAT--------G-GTGGGA------------GTGTA......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCTATGTGGATCCGTATGCCG2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATCTAT----ATACGTACTATTTGCAG........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCACAGAGCAACTCTA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGACCGTTCACTCTCGG....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TA-AAAATGTTATCTCA-----TGGCTAAT--A................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGGATGTCACAGAGC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TAAAT--------G-GTGGGA------------GTGTAGA----------------------------ACTT----------------G...................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AATTAATCAGTGCTA-----GGT.....................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................T--------G-GTGGGA------------GTGTAGA----------------------------AAG.....................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
droEre2
CAAG------------------------------TTCTGTA-----ATCTAC--TCCTCC----GTACAT---------------------------------------------------------------------AACAAAATATTTAAAATTATTATGCAATTAATCAGTGCTC-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTAAATTCCAATCATTATACTCGT----AGC--------TAACGTCATCGTTAAAT--------T-GT-----------------------------------------------------------------------GATAATC--GCTAACTAATCTGT----ATATGTACTTTTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCGTATTCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACTGAGCAACTCTACGTGGATC.........2611.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTT------CGGATGTCACTGAGC........................2211.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T------CGGATGTCACTGAGCAACTCTAC................2411.0010000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTCACTGAGCAACTCTA.................2111.0011000000
droYak3
CAAG------------------------------TTCAGTA-----ATCTAC--TCTTCC----GTACAT---------------------------------------------------------------------GTAAAAATATATGAAATT---ATGCAATTAATCAGTGCTA-----GGTGA--TA-AAAATGTTATCTCA-----TGGCTAAT--CACTGAATTCCAATTATTTTACTTGT----CGC--------TAACGTCATCGTTAAATGGTAGAATG-GTGGGA------------GTGTAGA----------------------------ACCT----------------GATAATC--GCCAACTAATCTGTG--TGTGTGTACTATTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCATATGCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAGCAACTCTACGT..............1812.00220000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAGCAACTCTACGTG.............1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTT------CGGATGTCACTGA..........................2011.00100000010000
.......................................TA-----ATCTAC--TCTTCC----GTACAT---------------------------------------------------------------------G....................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTT------CGGATGTCACTGAGCAACTCTA.................2811.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACTGAGCAACTCTACGTGGATC.........2511.00100100000000
droEug1
CAAT------------------------------GTCGCTA-----ATCTAT--ATTTCT----GTATTT---------------------------------------------------------------------AAACAAGTATCTAAAATGATTGTGAAATTAATCAGTTGAG-----GGCGA--TA-AAAACGTTATC--G-----TGGCTAAT--CACTGAATTCCACTTATTTTAGTCGT----ATTTT------CAACGTCATCATTATAT--------G-GTCATA------------GTTTAGA----------------------------TTTT----------------AGTAATC--GCTAACTAATCTTTG--T--A--TAACATTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCATACGCCGSizeHit CountTotal NormTotal
No Reads
droBia1
CTCA------------------------------AACAGTA-----ATCTAT--ACT-AT----GTACTT---------------------------------------------------------------------CTGAAAATAGTTAATGTTATTGTGAAATTAATCAGTGGTC-----GGTGA--TA-AAAACCTTATC--G-----TGGCTAAT--CACTGCGTTCCACTAGTTTTAGTCAT----ATTC-------TAACGTCATCGTTATAT--------G-GTGGGA------------GCTTAGA----------------------------ATTC----------------GGCACGC--GGCAACTAATCTGTG--TGTACATACCATTTGCAGCGATGACCGGT------CGGACGCCACTGAGCCCCTCTACGTGGATCCCTATGCCGSizeHit CountTotal NormTotal
No Reads
droTak1
CAAA------------------------------ATTGGTA-----ATCTAT--ACTTCT----GTACCC---------------------------------------------------------------------GT-AAAATACTTAAAATTATTGTGAAATTAATCAGTGGTCTGGTCGGTGA--TAAAAAACCTTATC--G-----TGGCTAAT--CACTGAATTCCACTTAATTTATTCGT----ACT--------CAACGTCATCGTTATAT--------G-GTGGTA------------GTTAAGA----------------------------ATTC----------------GGTAAGC--GTTAACTAATCTATG--TACACATACTATTTGCAGCGATGACCGTT------CGGATGTCACTGAGCAACTCTACGTGGATCCATATGCCGSizeHit CountTotal NormTotal
No Reads
droEle1
CAAA------------------------------ATCAGTA-----CTCCGT--ATTTCT----GTACCG---------------------------------------------------------------------TCCAAAATATTTTAAATTATTGTGAAGTTAATCAGTGACC-----GGTGA--TA-AAAGCGTTATC--GCGGCTTGGCTAAT--CACAGAATTCCATTTATTTTAGTTGA----ACT--------CAACGTCATTGTT---T--------G-GTGGGA------------GATTAAA----------------------------ATTC----------------GGTAATT--GCCAACTAATCTAGG--TACATACACTCATTGCAGCGATGACCGTT------CTGATGTCACTGAGCCACTCTACGTGGATCCATATGCCGSizeHit CountTotal NormTotal
No Reads
droRho1
CAAA------------------------------ATCAGTA-----TTCTTG--TTTCCT----GTACCC---------------------------------------------------------------------ATACGTTAATTTGAAATTATTATGAAATTAATCAGTGGTC-----GGTGA--AA-AAAACGTTATC--G-----TGTCTAAT--CACCGAATTCCATTTATTTTGATTTA----ATT--------CAACGTCATTGTTATTT--------G-GTGGGA------------GTGTAGA----------------------------ATTT----------------GGTAATC--GCCAACTAATCTGGG--TATATACACTAATTGCAGCGATGACCGTT------CCGATGCCACTGAGCCGCTCTACGTGGATCCATATGCCGSizeHit CountTotal NormTotal
No Reads
droFic1
CATA----------TACGAA-----------------GGTA-----ATCTTA--ACCTATTTTTTTACCT---------------------------------------------------------------------A-AAAAATAGTTGAAATTATTGTGAAATTAATCAGTGCTC-----GGTGA--TA-AAAACGTTATC--G-----TGGCTAAT--CGCTGAGTTCCGCCTATTTTAGTCGT----ACT--------TAACGTCATCGTTATAT--------T-GTTGGA------------ATGTGGA----------------------------ATTT----------------GGTAATC--GCCAACTAATCTGTA--TATATGTACTATTTGCAGCGATGAACGTT------CTGATGTCACTGAGCAGCTGTACGTGGATCCGTATGCCGSizeHit CountTotal NormTotal
No Reads
droKik1
CAAC-A--------AAGGAA-----GGAAATCCGTTCCGTA-----GTGTATATTTCTTT----GTGACC---------------------------------------------------------------------ATGTTTATTTTTGAAATTATTGTGAAATTAATCAGTGGCC-G---GTCGACTTA-TCAACGTTATCTTG-----TGGCTAAT--CACTGAATTCCGAATACTTTTGTCGT----AGCTTTAAACCCAACGTCATTGTTATTC--------G-GTGGGGGGAGTATAAATAGTATAGAAAAGGTGCGCCG-----------------CCGCTCGTATCT-CTGAC-ACTAATT--GCCAACTAATCCTTGGCCTGATTTACTATTTGCAGCGATGACCGGT------CAGATGTCACGGAACAGCTTTATGTGGATCCATACGCTGSizeHit CountTotal NormTotal
No Reads
droAna3
CACACAATGTAACTACCAAAAGAAATTAAATCCA-----TACATATGTATATAT------------------TTATAGTGT------------GAC-------------------------------------------GA-AAGAAATCAAAAATTATTGCAAAATTAATCAGAGCTT-----GGTGA--TA-A-AACGTTATC--G-----TGGCTAAC--CACTGAACTCCTAA---ATA-ATATA----ACT--------ATACGTCACTGCTGATA--------G-ATGGGG------------GCGTAGA----------------------------ATTGGCCATATCTTCTAACTGGTAATCTTGTCAACTAATCTG-----ACAT-TTCTACTTGCAGCGATGATCGCT------CGGATGTCACGGAACAGCTGTATGTGGATCCATATGCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................GAGCTT-----GGTGA--TA-A-AACGTTATC--G-----T..........................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGCT------CGGATGTCACGGAACAGC.....................2211.001000010
droBip1
CACA--ATGTAACT-ACCAAAGAAATCAAATATA-----TATATATATATATAT------------------TAATAGTTTAATAGATGG----------------------------------------------------------CACAAAATTATTGCGAAAGTAATCAATGCTT-----GGTGA--TA-A-AACGTTATC--G-----TGGCTAACACAACCCAATTCCCAATATATA-ATATA----AGT--------ATACGTCACTGCTGATG--------G-ATGGGG------------GCGTAGA----------------------------ACTGGCCATATCTTGTTACCGCCAATCTTGCCAACTAATCT-T----ATAT-TTCTACTTGCAGCGATGATCGCT------CGGATGTCACGGAACAGCTGTATGTGGATCCCTATGCCGSizeHit CountTotal NormTotal
No Reads
dp5
GAAG-----------------TAC------------ATATA-----ATCTAG--ATGTAT----ATACAAACAAATAACCTTGCTGATTTTGTAATGAAAGCCCGAGATTAATAAATTTTTGTACCCATTTTTGTGCCCCT--------------------------ACAATGGAGGTG-----GGTGTACGA-CCAACCTTATC--G-----TTGTTAAT--CACTGAATTCCAAACCTTTTGGCCACACGTATTAT-AAA-TA------AACATTGTCT--------GTGTGGGC------------TCTCGG-----------CGGCGCTGGGGACAGGGGACTGATCACAATACTTGAC-----ATAGTGCTAACGA-TGATT----ATA---AATCTTTGCAGCGATGATCGTT------CCGATGTGACAGAGCCGCTCTACGTCGATCCCTATGCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATGATCGTT------CCGATGTGACAGAGC........................2511.0010001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCCGCTCTACGTCGATCC........2111.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATCGTT------CCGATGTGACAGA..........................2011.0010100000000
droPer2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCGATGATCGTT------CCGATGTGACAGAACCGCTCTACGTCGATCCCTATGCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACCGCTCTACGTCGATCCCT......2612.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGATCGTT------CCGATGTGA..............................2012.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGATCGTT------CCGATGT................................1811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACCGCTCTACGTCGATC.........2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATGTGACAGAACCGCC....................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTCGATCCCTATGC..1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATGTGACAGAACCGCT....................1911.001100000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTGACGATCGCT------CCGATGTAACAGAACAGCTTTATATTGATCCTGGGGC--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTAACAGAACAGCTT...................1911.00100010
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCGACGATCGCT------CAGATGTAACTGAACCGCTCTACATTGATCC--------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................CGACGATCGCT------CAGATGTAACTGAAA........................2611.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTACT-CTTACAGCGATGATCGCT------CAGATGCTACCGAGCCAATCTTTATTGATGCC-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGACGATCGGT------CGGATGCAACAGAACCGATATTTATTGA------TGCCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:22 AM