ID:

dsi_19537

 Coordinate:

x:8542846-8543115 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.6 -38.4 -38.4

Flybase annnotation

exon [x_8543116_8543721_-]; CDS [x_8543116_8543692_-]; exon [x_8542178_8542845_-]; CDS [x_8542178_8542845_-]; intron [x_8542846_8543115_-]

No Repeatable elements found

mature
  1. 2l:15513396-15513411 -
  2. 2l:17609345-17609360 +
  3. 2l:17615505-17615520 +
  4. 2l:20088969-20088984 -
  5. 2l:20881860-20881875 -
  6. 2r:7245154-7245169 -
  7. 3r:23533997-23534012 +
  8. dsi_19537  x:8543086-8543101 -
  9. node_17984:89-104 +
  10. node_23511:297-312 -
  11. node_16305:233-248 +
  12. node_22529:2725-2740 +
star

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCGATTCCCGACTATGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCATATGTTATTTATAAGTAAATATTGTATAGTGCGCTAAAGAAATGGATTGTGATTTAGCAATATTTTTGTATACATTCTTATCTTTCATATTGTTAGCTACCATTTCAATTGAATTTTAATCAAATGAATGAAATAGTAACGCAAAATTAATATTAACAAGCTCATTATCTTATCTCTCGCATAAAGTATTGAAATCAGCATAATCACATTTTGCAATTAAATAAATCTGATTAGATAAACATTAATGTATGTGCATATTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTG
**************************************************((((((...(((((...........((((((.....((((.....(((((((...((....(((((((((....(((........))).....)))))))))))..)))))))......((((((.((....)).)))))).....))))....))))))))))).))))))............((((((...((((((........((((((.((((...........)))).))))))........))))))))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 M023
head
 M024
male body		 O001
Testis
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
.......................GGGAGCGTCGCGACAAA.......................................................................................................................................................................................................................................................................................................................................... 17 2 6 3.50 21 20 0 0 0 0 0 0 1 0 0 0
...................ATTCGGGAGCGTCGCGACAA........................................................................................................................................................................................................................................................................................................................................... 20 3 3 1.33 4 3 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................ATCATGGTGAACCCGAGCTGAATGCCA............................. 27 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................CATGGTGAACCCGAGCTGAATGCC.............................. 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TTGGCATGGCCAAGGCGG..... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CCATTGGCATGGCCAAGGCGGC.... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................TGAATGCCAGGTCCA....................... 15 1 7 0.71 5 0 5 0 0 0 0 0 0 0 0 0
..................CCTTTGGGAGCGCGG................................................................................................................................................................................................................................................................................................................................................. 15 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
.................................CTACAAAACCAATCGTGG............................................................................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
.....................TCGGGAGCGTCGCGACAAA.......................................................................................................................................................................................................................................................................................................................................... 19 3 11 0.18 2 2 0 0 0 0 0 0 0 0 0 0
....................TTCGGGAGCGTCGCGACAA........................................................................................................................................................................................................................................................................................................................................... 19 3 18 0.17 3 3 0 0 0 0 0 0 0 0 0 0
...................ATTCGGGAGCGTCGCGACA............................................................................................................................................................................................................................................................................................................................................ 19 3 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................TAGAGATATCTGATTAGATA............................................................................ 20 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
................................................................TTTATAAGTAAATATT.................................................................................................................................................................................................................................................................................................. 16 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATCTTCTCTCTCGTA.................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.TCGATTCCCGGCAATGG................................................................................................................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................ATGAACGAAATAGTGAC............................................................................................................................................................................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................ATTTGGGAGAGCGTCGAGA............................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................AGGAATGGATTCTGATT................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TTAATGGAATCAGCATAAT............................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................GTTTCGGATCGCGGCGACA............................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GAGCTAAGGGCTGATACCGTAAACCCTCGCGCCGCTGTTTTGGTTAGTACCACTCGTATACAATAAATATTCATTTATAACATATCACGCGATTTCTTTACCTAACACTAAATCGTTATAAAAACATATGTAAGAATAGAAAGTATAACAATCGATGGTAAAGTTAACTTAAAATTAGTTTACTTACTTTATCATTGCGTTTTAATTATAATTGTTCGAGTAATAGAATAGAGAGCGTATTTCATAACTTTAGTCGTATTAGTGTAAAACGTTAATTTATTTAGACTAATCTATTTGTAATTACATACACGTATAAGGTCCACTTGGGCTCGACTTACGGTCGAGGTAACCGTACCGGTTCCGCCGCGAC
**************************************************((((((...(((((...........((((((.....((((.....(((((((...((....(((((((((....(((........))).....)))))))))))..)))))))......((((((.((....)).)))))).....))))....))))))))))).))))))............((((((...((((((........((((((.((((...........)))).))))))........))))))))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................................................................................................................TAGAATAGTGAGCGT.................................................................................................................................... 15 1 6 0.17 1 1 0 0 0
...............................................................................................................................................................................................................ACAATTGTTCGAGTAA................................................................................................................................................... 16 1 6 0.17 1 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................................TTACCGTCGAGGTAAC.................... 16 1 16 0.06 1 0 0 1 0
................................................................................................................................................................................................................................................................................................................................CACTTGGGCTCCACTTT................................. 17 2 17 0.06 1 0 0 0 1
................................................................................................................................................................AAGTTAACTTACAATT.................................................................................................................................................................................................. 16 1 20 0.05 1 1 0 0 0
...........................................................................................................................CCATATGTAAGAATAGAATT................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0
.................................................................................................................................................................AGTTAACTTACAATT.................................................................................................................................................................................................. 15 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8542796-8543165 - dsi_19537 CTCGATTCCCGACTATGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCATATGT-TATTTATAAGTAAATATTGTATAGTGCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGATTGTGATTTAGCAA------------------TATTTTTGTATACATT--------CTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCATATTGTTAG------CTACCATTTCAATTGAATTTTAATCAAATGA-ATGAAATAGTAACGCAAAATTAATATTAACAAGCTCATTATCTTATCTCTC------------------------------------------------------------------------------------------------------------------------------------------GCATAAAGTAT------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGCAATTAAATAAATCTGATTAGATAA-ACATTAAT--GTATGTG----------------------------C-ATA-TTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTG
droSec2 scaffold_34:356228-356598 - CTCGATTCCCGACTATGGCATTTGGGAGCGCGGAGATAAAACCAATCATGGTGAGCATATGTATATTTATAACTAAATATTGTATAGTGCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGATTGTGATTTAGCAA------------------TATTTTTGTTTACATT--------CTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAAATTGTTAG------CTACCATTTCAATTGAATTTTAATCAAATGA-ATGAAATAGTAACGCAAAATTAATATTAACAAGCTCATTATCTTATCTTTT------------------------------------------------------------------------------------------------------------------------------------------GCATAAAGTAT------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGCAATTAAATAAATCTGATTAGATAA-ACGTTAAT--GTATGTG----------------------------C-ATA-TTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTG
dm3 chrX:8996217-8996577 - CTCGATTCCCGACTATGGCATTTGGGAGCGCGGCGATAAAACCAATCATGGTGAGCATATGT-TATTTATAAATAAATATTGTATAGTGCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGGTTGTGACTTAGCAA------------------TATTTTTGTATACATT--------CTTA------------------------------------------------------------------------------------------------------------------------------------------TCTCTCAAATTGTTTA------TTACCATTTCAATTCAAATT---------GAAATAAAATAGTAACGCAAAAT-AAGATTAATAAGCTCATTATCTTATCACTC------------------------------------------------------------------------------------------------------------------------------------------GCATAAAGTAG------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGCAATTAAATAAATCTGATTAGATAA-AAGTTAAT--GTATATG----------------------------C-ATA-TTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTG
droEre2 scaffold_4690:6121073-6121445 + CTCGATTCCCGACTACGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCAT--TT-TATTTAT--GTAGGCATTGTATAGCATG------------------------------------------------------------------------------TC------------AAGA-AATTGGTTCTGATTTATCAA------------------TACTTTTGTATACAAT----CTATCTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCATATTTTTGATAAAGTATATAATTTCAATTCGATTTTAATCAAATGA-AACAAATAGTAAGGCAAAATGAATATTAACAAGTTCATTATCTTATCT--C------------------------------------------------------------------------------------------------------------------------------------------GCAAAAAACAA------------------------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCATAATTTGCAATTAAATAAATCAGATTAGATAA-ATGTTAAT--GCTTGCG----------------------------C-ATG-TTCCAGGTGAACCGGAGCTAAACGCCAGCTCCATTGGCATGGCCAAGGCGGCCCTG
droYak3 X:12319991-12320432 + CTCGATTCCCGACTACGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCAA-TAT-TATTCATCGGAAGGCATTGTATATTTTG--GT----------TCTGAAGAAAATTG-------------------------------GTTCTGAGGAAAATTGGTTCT-----------GAAGAAAATTGGTTCTGATGTATCAA------------------TAGTTTTGTATACATT----CTTTCTTAAGTTT-----CATA-----------------------------TTGTT-----------------------TGGC-GTTTATCGAAAACAATACTTTTG------------------------------------------------------ATAAAGAATACCATTTCAATTCAATTTTAATCAAATGA-AACAAATAATACGGCCAAATGGATATTAACAATTTCATTATCTTATCA--C------------------------------------------------------------------------------------------------------------------------------------------GCAAAGAGGAA------------------------------AGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCATAATTTGCAATTAAATAAATCTGATTAGATAA-ATGTTAATATGCATACA----------------------------CAATA-TTCCAGGTGAACCGGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCCCTG
droEug1 scf7180000409631:408117-408568 - CTCGATCCCTGACTACGGAATATGGGAACGCGGCGACAAGACGAATCACGGTGAGCATAACT---------------------TTAGGGGGCTGTTGAGTGTATACTT--CAAAAATT---------------------------------------GGAAACTTGGAACCACAATAACCTAACAGAA-AACAGTTATTAT----TT-A-----------------------------------------TTTATCTTT-----T-TA----AGTTTTCTT-----------------GATTTCTTAATTGACTAAAAAAAATTATGGTTTTTTATCAGAAATCAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATAAGGAAAATATA------------G-TATTATCAATGGA-------------------T-CCA--ATTCAATATTTTGG-------------------------------------------------------------------------------------------------ATTTCAATATTTTGGATTTTTAATTAATTACTTTCTGCTATCTCTATAATTGTTAATTAGTCATAATTGAAATAGTTTAATCTAAGA-----------------------TTAATACATTATCTTTGTTTGACCAA-ATATTAAT--ACATTTG----------------------------T-ATGTTTTCAGGGGAACCGGAGTTGAATGCCAGCTCCATTGGCATGGCCAAAGCGGCGTTG
droBia1 scf7180000301760:4595112-4595559 - CTCGATCCCCGACTACGGGATATGGGAGCGCGGAGACAAGACCAACCATGGTGAGTAAATGGTA-------------------------CA--------------TTTGTAAAAAATAGTTGGAAAAAAAGTCAACCTAATGATTAAAATGTTC--------------------------------------------GAA-----------GTAAAATTA---------------------------------------------------------------------------------------------------------GGACTTTTATCAAAAACATTTATTTAGATACAGAATACAGATAAGCAGTATCTGTTTACATTTTTTACCG---AAT------------------------------A------TTATGA-AGC-----------------------TCACTTTTTTATTATCTTATCTCCAAAACCATAATTGA---------------------------------------------------------------------------------------------------------------------TTG--ATAAAGTAATATGTTTTGTTATTCTTTAAAATATATTTAAATTTCGAGAAAATTAG-CAGCGATAAAGAATAAAATTCGTGTAGGAATAGGCCGAAGATT------------------------------------------------------------------------------------------------------------------ATAT-----------------------------------------TTTGTGTGTATATAACATGTTTATATAATATTTAC-ATT-CTCCAGGTGAACCGGAATTGAATGCCAGCTCCATTGGCATGGCCAAGGCAGCGCTG
droTak1 scf7180000415843:768567-768820 + CTCCATCCCGGACTACGGAATATGGGAGCGCGGCGACAAGACCAATCATGGTGAGTGAATGCTCAA-----------------------------------------------------------------------------------TTTTT--------------------------------------------GAT-----------GTTTAATTAAG---TAATTTTGTATGTATTACCTCTATCCTATCTTT-----TATA----AACCTTCCT-----------------AGTT-----------------------TTGCTTTCTATCAAAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTTTTTAGATAAATAAAACATA------------ATTTT---------------TACATGT----TTTA-TCA--ATTGAATAATATGC------------------------------TAAGAAAATTATTTAGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATAAAACCAGATGGACAA------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491006:2513302-2513641 - CTCGATCCCTGACTACGGCATTTGGGAGCGCGGCGATAAGACCAATCATGGTAGGTACATCG----------ACTGGC-----------TGCTC---A----------CAAAACGATCT-----------------------------GTTTAA--------------------------------------------TTT-----------GTTCAAATGAA---TCGTTTTTTGT-----------ATCTTATCATTAATTTCTTTTGTTTGCCAACGATATAGATTATAATAAAATGTT-----------------------TGGC-TTTTAGCAAACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTGATAAACAAAACATTTTCCAGATATTTATTTT---------------TACCAGTCCATTTTTCCCATCAGTGAACTATA---------------------------------------TATTATTTCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--ATTTGTG----------------------------T-GTA-TTCCAGGTGAGCCGGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTG
droRho1 scf7180000779841:522121-522376 - ATTTGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------------ATCTTTTATTCACT--------ATCTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCCAATCGT---------------------------------------------------------------------------------------------------AATTGGCACCGCATTTTATTGGAATAATATGAAAGCTTTTAATCAAC------ATTTTTATATAAACGAAACAATTA--AGTAAAAAACTAA---------------AATCAGATAATTAAATCCATC---TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTATATTTTATAA----------------TTTGATCAATTAAAAAATGTAT--GTATTTT----------------------------C-GTA-TTCCAGGTGAACCGGAGCTGAATGCCAGTTCAATTGGCATGGCCAAGGCGGCGCTG
droFic1 scf7180000453829:964500-964941 - CTCGATTCCGGATTATGGCATTTGGGAGCGAGGCGACAAGACCAACCATGGTAAGTAAATCGCTTTCCATC----------------------------------------------------------------------------------------------------ACAAAAATAAAATTGAA-ATGTGCTTCTAT----TA-ACTTTTATGAATGAAAACAATTTTGGCATCCATTCCTTTTATCTTATCATT------------------------------------------------------------------------------------------------------------------------------------------TCGGT--------------------------------------------------------------------------------------------------------------CAGCACTTAATTAGAATAAAGTGTTAGGTTTTTATCAAAATCAGT-TTTCTAGATAAGAGAGACATG------------AATATTAACAATAGT-------------------T-TCA--ATTAAATATTATGC------------------------------AAAAGAAA---------------------------------GATAAGGCGAAGAATATTAAATCTGGATTTAA-----------------TTG---------------------------------GTTGTAT---------AAAAATCAAAAGTTAATAAGCATACCTCTTAATTTTCATTACAATTTACTTG-TTAGACAG-AAATTAAT--GTATCTT----------------------------C-TTA-TTCTAGGTGAACCGGAGCTGAACGCCAGCTCCATTGGCATGGCGAAGGCGGCGCTG
droKik1 scf7180000301542:57264-57350 - AATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA-TAAACAT----TTTT-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CTT-TGACAGGTGAGCCCGAGCTGAATGCCAGCTCCATTGGAATGGCCAAGGCGGCTCTG
droAna3 scaffold_13047:807342-807428 - CTCCATACCGGACTATGGCATCTGGGAGCGTGGCGACAAGACCAATCATGGTACCAAT-----------------------------------------------------------------------------------------------------------------ACAATAATATA----------------------------------------------------------------------------------------------------------------------TA-----------------------------------------------------------------------------------------------------------------------------TCACTTATAAACATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396431:591632-591721 - TTGAGTG-----------------------GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAATTGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACTGAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTTCTAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCCGCTCTA
dp5 XL_group1e:6987729-6987786 + CTCCATACCCGACTATGGCATCTGGGAGCGTGGCGACAAGACAAATCATGGTGGGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_13:1567696-1567754 - ATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGGTGAGCCGGAACTGAATGCCAGCTCCATTGGCATGGCCAAGGCCGCCTTG
droWil2 scf2_1100000004590:2066111-2066168 - CTCTATACCCGATTATGGTATTTGGGAGCGTGGCGACAAGACAAATCATGGTAAGCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:9315255-9315311 - CTCCATTCCTGACTATGGCATCTGGGAGCGGGGCGACAAGACCAATCATGGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:13331528-13331584 + CTCCATACCAGACTATGGTATTTGGGAACGCGGCGACAAGACCAATCATGGTGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:322668-322725 - CTCTATACCCGATTATGGCATCTGGGAGCGCGGTGATAAGACCAATCATGGTGAGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTCGATTCCCGACTATGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCATATGT-TATTTATAAGTAAATATTGTATAGTGCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGATTGTGATTTAGCAA------------------TATTTTTGTATACATT--------CTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCATATTGTTAG------CTACCATTTCAATTGAATTTTAATCAAATGA-ATGAAATAGTAACGCAAAATTAATATTAACAAGCTCATTATCTTATCTCTC------------------------------------------------------------------------------------------------------------------------------------------GCATAAAGTAT------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGCAATTAAATAAATCTGATTAGATAA-ACATTAAT--GTATGTG----------------------------C-ATA-TTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATGGCCAAGGCGG.....1811.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGGCATGGCCAAGGCGGC....2211.00100000000000100000
.................................................................TTTATAAGTAAATATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16120.08100000000001000000
droSec2
CTCGATTCCCGACTATGGCATTTGGGAGCGCGGAGATAAAACCAATCATGGTGAGCATATGTATATTTATAACTAAATATTGTATAGTGCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGATTGTGATTTAGCAA------------------TATTTTTGTTTACATT--------CTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCAAATTGTTAG------CTACCATTTCAATTGAATTTTAATCAAATGA-ATGAAATAGTAACGCAAAATTAATATTAACAAGCTCATTATCTTATCTTTT------------------------------------------------------------------------------------------------------------------------------------------GCATAAAGTAT------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGCAATTAAATAAATCTGATTAGATAA-ACGTTAAT--GTATGTG----------------------------C-ATA-TTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................ATTTGGGAGCGCGGAGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
....................TTTGGGAGCGCGGAGATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
........................................................................................GCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................TTTGGGAGCGCGGAGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
.....................TTGGGAGCGCGGAGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGGCATGGCCAAGGCGGCGC..2411.0010010
......................TGGGAGCGCGGAGATAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
..........GACTATGGCATTTGGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
CTCGATTCCCGACTATGGCATTTGGGAGCGCGGCGATAAAACCAATCATGGTGAGCATATGT-TATTTATAAATAAATATTGTATAGTGCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGGTTGTGACTTAGCAA------------------TATTTTTGTATACATT--------CTTA------------------------------------------------------------------------------------------------------------------------------------------TCTCTCAAATTGTTTA------TTACCATTTCAATTCAAATT---------GAAATAAAATAGTAACGCAAAAT-AAGATTAATAAGCTCATTATCTTATCACTC------------------------------------------------------------------------------------------------------------------------------------------GCATAAAGTAG------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGCAATTAAATAAATCTGATTAGATAA-AAGTTAAT--GTATATG----------------------------C-ATA-TTCCAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATGGCCAAGGCGGCGCT.2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCGAGCTGAATGCCA.............................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAACCCGAGCTGAATGCC..............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTTGGGAGCGCGGCGATAAAACCAATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCATTGGCATGGCCA...........1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTGGCATGGCCAAGGCGGCGC..2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............CTATGGCATTTGGGAGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000
...................ATTTGGGAGCGCGGCGATAAAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTATGGCATTTGGGAGCGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........GACTATGGCATTTGGGAGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GACTATGGCATTTGGGAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATGGCCAAGGCGGCGC..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAACCCGAGCTGAATGCCA.............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CATTTGGGAGCGCGGCGATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................GCATTTGGGAGCGCGGCGATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........ACTATGGCATTTGGGAGCGCGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAACCAATCATGGTGAGCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGCATTTGGGAGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..............ATGGCATTTGGGAGCGCGGCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................GCG------------------------------------------------------------------------------CT-----------AAAGA-AATGGGTTGTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACTATGGCATTTGGGAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GACTATGGCATTTGGGAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAG------------------------------TGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TC.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................ATTTGGGAGCGCGGCGATAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCATGGCCAAGGCGGCGCT.2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TGGTGAGCATATGT-TATTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............ATGGCATTTGGGAGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGTTAAT--GTATATG----------------------------C-ATA-TTCCAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCATGGCCAAGGCGG.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATGGCCAAGGCGGCG...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCATTGGCATGGCCAAGGCG......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCACATTTTGC....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCATGGCCAAGGCGGC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGAGCTGAATGCCAGCTCC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGCCAGCTCCATTGGCA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCCGAGCTGAATGCC..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGAGCTGAATGCCAGCTC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACTATGGCATTTGGGAGCGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGGCATTTGGGAGCGCGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAATAAATCTGATGT.................................................................................................................19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTCGATTCCCGACTACGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCAT--TT-TATTTAT--GTAGGCATTGTATAGCATG------------------------------------------------------------------------------TC------------AAGA-AATTGGTTCTGATTTATCAA------------------TACTTTTGTATACAAT----CTATCTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCATATTTTTGATAAAGTATATAATTTCAATTCGATTTTAATCAAATGA-AACAAATAGTAAGGCAAAATGAATATTAACAAGTTCATTATCTTATCT--C------------------------------------------------------------------------------------------------------------------------------------------GCAAAAAACAA------------------------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCATAATTTGCAATTAAATAAATCAGATTAGATAA-ATGTTAAT--GCTTGCG----------------------------C-ATG-TTCCAGGTGAACCGGAGCTAAACGCCAGCTCCATTGGCATGGCCAAGGCGGCCCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACCGGAGCTAAACGCCAG............................2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTAAACGCCAGCTCCATTGGC..................2311.0011000000
......................TGGGAGCGCGGCGACAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCATGGCCAAGGCGGC....2111.0010100000
.............TACGGCATTTGGGAGCGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAACCGGAGCTAAACGCCAGCT..........................2511.0010100000
....................TTTGGGAGCGCGGCGACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..........GACTACGGCATTTGGGAGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............CTACGGCATTTGGGAGCGCGGCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCATTGGCATGGCCAAGGCGGC....2411.0010000010
droYak3
CTCGATTCCCGACTACGGCATTTGGGAGCGCGGCGACAAAACCAATCATGGTGAGCAA-TAT-TATTCATCGGAAGGCATTGTATATTTTG--GT----------TCTGAAGAAAATTG-------------------------------GTTCTGAGGAAAATTGGTTCT-----------GAAGAAAATTGGTTCTGATGTATCAA------------------TAGTTTTGTATACATT----CTTTCTTAAGTTT-----CATA-----------------------------TTGTT-----------------------TGGC-GTTTATCGAAAACAATACTTTTG------------------------------------------------------ATAAAGAATACCATTTCAATTCAATTTTAATCAAATGA-AACAAATAATACGGCCAAATGGATATTAACAATTTCATTATCTTATCA--C------------------------------------------------------------------------------------------------------------------------------------------GCAAAGAGGAA------------------------------AGA---------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCATAA-TCATAATTTGCAATTAAATAAATCTGATTAGATAA-ATGTTAATATGCATACA----------------------------CAATA-TTCCAGGTGAACCGGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCCCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................G--GT----------TCTGAAGAAAATTG-------------------------------GTTCTGAGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000000003
...GATTCCCGACTACGGCATTTGGGAGCGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3112.00200000000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCATTGGCATGGCCAAGGC.......2211.00100100000000
...........ACTACGGCATTTGGGAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTGGCATGGCCAAGGC.......2011.00101000000000
........CCGACTACGGCATTTGGGAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............CTACGGCATTTGGGAGCGCGGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACCGGAGCTGAATGC...............................1911.00100000100000
droEug1
CTCGATCCCTGACTACGGAATATGGGAACGCGGCGACAAGACGAATCACGGTGAGCATAACT---------------------TTAGGGGGCTGTTGAGTGTATACTT--CAAAAATT---------------------------------------GGAAACTTGGAACCACAATAACCTAACAGAA-AACAGTTATTAT----TT-A-----------------------------------------TTTATCTTT-----T-TA----AGTTTTCTT-----------------GATTTCTTAATTGACTAAAAAAAATTATGGTTTTTTATCAGAAATCAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATAAGGAAAATATA------------G-TATTATCAATGGA-------------------T-CCA--ATTCAATATTTTGG-------------------------------------------------------------------------------------------------ATTTCAATATTTTGGATTTTTAATTAATTACTTTCTGCTATCTCTATAATTGTTAATTAGTCATAATTGAAATAGTTTAATCTAAGA-----------------------TTAATACATTATCTTTGTTTGACCAA-ATATTAAT--ACATTTG----------------------------T-ATGTTTTCAGGGGAACCGGAGTTGAATGCCAGCTCCATTGGCATGGCCAAAGCGGCGTTGSizeHit CountTotal NormTotal
No Reads
droBia1
CTCGATCCCCGACTACGGGATATGGGAGCGCGGAGACAAGACCAACCATGGTGAGTAAATGGTA-------------------------CA--------------TTTGTAAAAAATAGTTGGAAAAAAAGTCAACCTAATGATTAAAATGTTC--------------------------------------------GAA-----------GTAAAATTA---------------------------------------------------------------------------------------------------------GGACTTTTATCAAAAACATTTATTTAGATACAGAATACAGATAAGCAGTATCTGTTTACATTTTTTACCG---AAT------------------------------A------TTATGA-AGC-----------------------TCACTTTTTTATTATCTTATCTCCAAAACCATAATTGA---------------------------------------------------------------------------------------------------------------------TTG--ATAAAGTAATATGTTTTGTTATTCTTTAAAATATATTTAAATTTCGAGAAAATTAG-CAGCGATAAAGAATAAAATTCGTGTAGGAATAGGCCGAAGATT------------------------------------------------------------------------------------------------------------------ATAT-----------------------------------------TTTGTGTGTATATAACATGTTTATATAATATTTAC-ATT-CTCCAGGTGAACCGGAATTGAATGCCAGCTCCATTGGCATGGCCAAGGCAGCGCTGSizeHit CountTotal NormTotal
No Reads
droTak1
CTCCATCCCGGACTACGGAATATGGGAGCGCGGCGACAAGACCAATCATGGTGAGTGAATGCTCAA-----------------------------------------------------------------------------------TTTTT--------------------------------------------GAT-----------GTTTAATTAAG---TAATTTTGTATGTATTACCTCTATCCTATCTTT-----TATA----AACCTTCCT-----------------AGTT-----------------------TTGCTTTCTATCAAAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTTTTTAGATAAATAAAACATA------------ATTTT---------------TACATGT----TTTA-TCA--ATTGAATAATATGC------------------------------TAAGAAAATTATTTAGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAATAAAACCAGATGGACAA------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTCGATCCCTGACTACGGCATTTGGGAGCGCGGCGATAAGACCAATCATGGTAGGTACATCG----------ACTGGC-----------TGCTC---A----------CAAAACGATCT-----------------------------GTTTAA--------------------------------------------TTT-----------GTTCAAATGAA---TCGTTTTTTGT-----------ATCTTATCATTAATTTCTTTTGTTTGCCAACGATATAGATTATAATAAAATGTT-----------------------TGGC-TTTTAGCAAACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTGATAAACAAAACATTTTCCAGATATTTATTTT---------------TACCAGTCCATTTTTCCCATCAGTGAACTATA---------------------------------------TATTATTTCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--ATTTGTG----------------------------T-GTA-TTCCAGGTGAGCCGGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCGGCGCTGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------------ATCTTTTATTCACT--------ATCTTA------------------------------------------------------------------------------------------------------------------------------------------TCTTTCCAATCGT---------------------------------------------------------------------------------------------------AATTGGCACCGCATTTTATTGGAATAATATGAAAGCTTTTAATCAAC------ATTTTTATATAAACGAAACAATTA--AGTAAAAAACTAA---------------AATCAGATAATTAAATCCATC---TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTATATTTTATAA----------------TTTGATCAATTAAAAAATGTAT--GTATTTT----------------------------C-GTA-TTCCAGGTGAACCGGAGCTGAATGCCAGTTCAATTGGCATGGCCAAGGCGGCGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
CTCGATTCCGGATTATGGCATTTGGGAGCGAGGCGACAAGACCAACCATGGTAAGTAAATCGCTTTCCATC----------------------------------------------------------------------------------------------------ACAAAAATAAAATTGAA-ATGTGCTTCTAT----TA-ACTTTTATGAATGAAAACAATTTTGGCATCCATTCCTTTTATCTTATCATT------------------------------------------------------------------------------------------------------------------------------------------TCGGT--------------------------------------------------------------------------------------------------------------CAGCACTTAATTAGAATAAAGTGTTAGGTTTTTATCAAAATCAGT-TTTCTAGATAAGAGAGACATG------------AATATTAACAATAGT-------------------T-TCA--ATTAAATATTATGC------------------------------AAAAGAAA---------------------------------GATAAGGCGAAGAATATTAAATCTGGATTTAA-----------------TTG---------------------------------GTTGTAT---------AAAAATCAAAAGTTAATAAGCATACCTCTTAATTTTCATTACAATTTACTTG-TTAGACAG-AAATTAAT--GTATCTT----------------------------C-TTA-TTCTAGGTGAACCGGAGCTGAACGCCAGCTCCATTGGCATGGCGAAGGCGGCGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
AATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAA-TAAACAT----TTTT-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CTT-TGACAGGTGAGCCCGAGCTGAATGCCAGCTCCATTGGAATGGCCAAGGCGGCTCTGSizeHit CountTotal NormTotal
No Reads
droAna3
CTCCATACCGGACTATGGCATCTGGGAGCGTGGCGACAAGACCAATCATGGTACCAAT-----------------------------------------------------------------------------------------------------------------ACAATAATATA----------------------------------------------------------------------------------------------------------------------TA-----------------------------------------------------------------------------------------------------------------------------TCACTTATAAACATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................TCTGGGAGCGTGGCGACAAGACCAATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000002
.........................GAGCGTGGCGACAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.............................GTGGCGACAAGACCAATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..CCATACCGGACTATGGCATCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................TGGGAGCGTGGCGACAAGACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................GGGAGCGTGGCGACAAGACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...CATACCGGACTATGGCATCTGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...................ATCTGGGAGCGTGGCGACAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
......................TGGGAGCGTGGCGACAAGACCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
...................ATCTGGGAGCGTGGCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............TGGCATCTGGGAGCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................CTGGGAGCGTGGCGACAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............TATGGCATCTGGGAGCGTGGCGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............ATGGCATCTGGGAGCGTGGCGACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................GGAGCGTGGCGACAAGACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
......................TGGGAGCGTGGCGACAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......CCGGACTATGGCATCTGGGAGCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droBip1
TTGAGTG-----------------------GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAATTGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACTGAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTTCTAGGTGAACCCGAGCTGAATGCCAGCTCCATTGGCATGGCCAAGGCCGCTCTASizeHit CountTotal NormTotal
No Reads
dp5
CTCCATACCCGACTATGGCATCTGGGAGCGTGGCGACAAGACAAATCATGGTGGGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............ATGGCATCTGGGAGCGTGGCGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000020
.............TATGGCATCTGGGAGCGTGGCGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000020
...................ATCTGGGAGCGTGGCGACAAGACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................GGCATCTGGGAGCGTGGCGACAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
.......................GGGAGCGTGGCGACAAGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
...............TGGCATCTGGGAGCGTGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........CGACTATGGCATCTGGGAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........CGACTATGGCATCTGGGAGCGTGGCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
.......................GGGAGCGTGGCGACAAGACAAATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010000
..............ATGGCATCTGGGAGCGTGGCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000010
................GGCATCTGGGAGCGTGGCGACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
.............TATGGCATCTGGGAGCGTGGCGACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
droPer2
ATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGGTGAGCCGGAACTGAATGCCAGCTCCATTGGCATGGCCAAGGCCGCCTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CTCTATACCCGATTATGGTATTTGGGAGCGTGGCGACAAGACAAATCATGGTAAGCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........CGATTATGGTATTTGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
.............TATGGTATTTGGGAGCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
CTCTATACCCGATTATGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
............TTATGGTATTTGGGAGCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..............ATGGTATTTGGGAGCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....TACCCGATTATGGTATTTGGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
CTCCATTCCTGACTATGGCATCTGGGAGCGGGGCGACAAGACCAATCATGGTTAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................GGGAGCGGGGCGACAAGACCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
......................TGGGAGCGGGGCGACAAGACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
........CTGACTATGGCATCTGGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
....ATTCCTGACTATGGCATCTGGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
........CTGACTATGGCATCTGGGAGCGGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
CTCCATACCAGACTATGGTATTTGGGAACGCGGCGACAAGACCAATCATGGTGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................CGCGGCGACAAGACCAATCATGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................TTGGGAACGCGGCGACAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........ACTATGGTATTTGGGAACGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
CTCTATACCCGATTATGGCATCTGGGAGCGCGGTGATAAGACCAATCATGGTGAGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:22 PM