ID:dsi_19513 |
Coordinate:3l:7938684-7938757 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7936919_7938683_-]; CDS [3l_7936919_7938683_-]; CDS [3l_7938758_7939826_-]; exon [3l_7938758_7939826_-]; intron [3l_7938684_7938757_-]
No Repeatable elements found
| ##################################################--------------------------------------------------------------------------################################################## GGGATGCCGTTCCAAATCGAAATCTCTACACGACCATGTTGTGCGGCAGGGTAAGTATACAAATAAATTAGCCATTATTAATATGACTAGTAACAATATTTGCATTGTTTTATCTTTGAAACAGCCGACAGCACGACTCCGGATCCTCCAGCTGTTCGTAAATTATCCGTCCCA **************************************************((((((((........(((((.(((.......))).)))))....)))))))).((((((((....))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O001 Testis |
SRR902009 testis |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................TCCTCCAGCTGTTCGTAAATTATCCTT.... | 27 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ......................TCTCTACACGACCATGTTGT.................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ....................................TGTTGTATGACAGGGTAAGTA..................................................................................................................... | 21 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...................................ATGTTGTGCTGCAGGGT.......................................................................................................................... | 17 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..............................CGACCATGTCGTGAGACAGG............................................................................................................................ | 20 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................TGCGGCAGGGTAAATA..................................................................................................................... | 16 | 1 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................GCTGTTCGTCAATTA......... | 15 | 1 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 |
|
CCCTACGGCAAGGTTTAGCTTTAGAGATGTGCTGGTACAACACGCCGTCCCATTCATATGTTTATTTAATCGGTAATAATTATACTGATCATTGTTATAAACGTAACAAAATAGAAACTTTGTCGGCTGTCGTGCTGAGGCCTAGGAGGTCGACAAGCATTTAATAGGCAGGGT
**************************************************((((((((........(((((.(((.......))).)))))....)))))))).((((((((....))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR1275487 Male larvae |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ...TACGGCAAGGTTTAGCTTTAG...................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ........CATGTTTTTGCTTTAGAGATGT................................................................................................................................................ | 22 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 |
| .....................................................................................................................................GCTGGGGCCTTGGAGGT........................ | 17 | 2 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................TATACTGATCGTTGT............................................................................... | 15 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 |
| .............................TGCTGCTACCACAGGCCGT.............................................................................................................................. | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:33 AM