ID:

dsi_19457

 Coordinate:

3r:1333755-1333904 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.8 -35.4 -35.2 -35.1

Flybase annnotation

Antisense to five_prime_UTR [3r_1333401_1334430_-]; Antisense to exon [3r_1333401_1334430_-]

Repeatable elements

NameClassFamilyStrand
(GA)nSimple_repeatSimple_repeat+

Sense Strand Reads

AACGGAGAAACGGGAGCTGGAACCGTAGCGGATGTGGGAGCGGGAACGAGGTTAGTACTTTTCCGCGCCGAGTCGTCCCTAAATAAATGGCATATATACCGCTGTGCGTGTGTACATATGTATATGTGCCTCGTCTGTATGCAGCGTGGTCTTCGTGCCGAAGAGACAGCGAGCGAGAGAGAGAGAGAGAGGAGAGTCGAAGGATGTTGATGCCTGGCGGAGGCTAAAAGTTGTCCGTTTTTTCTGCGCC
****************************************************..((..(((((.((((((.((.((............(((((((((((...(((((....)))))...)))))))))))..........)).)).))))......)).)))))....)).******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 M053
female body
 GSM343915
embryo
 M023
head
 M024
male body
.....................................................................................................................................................................................................CGAAGGATGTTGATGCCTGGC................................ 21 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0
............................................................TGCCACGCGGAGTCGTCCCTAA........................................................................................................................................................................ 22 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
....................................................TAGTACTTTTCCGCGCCGAGT................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......GAAACGGGAGCTGGAACCGTA............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GAGGAGAGTCGAAGGATGTTG......................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................CTTCGTGCCGAAGAGACAGCG............................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................TTTTCCGCGCCGAGTCGTCCC........................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GTGCCGAAGAGACAGCGAGC............................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........CGGGAGCTGGAACCGTAGCGGG.......................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCTGTATGCAGCGTGGTCTT................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
........................GTAGCGGGTGTGGGAGCGGGAA............................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................ACGAGGTTAGTACTTTTCCGCGC...................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................CGCCGAGTCGTCCCTAAATAAA................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................CATATGTATATGTGCCTCGTC................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TAAAAGTTGTCCGTTTTTT....... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................TATGTGCCTCGTCTGTATGCA........................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............GGAGCTGGAACCGTAGCGGG.......................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................CGGGTGTGGGAGCGGGAACGAGGTTAG................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................TGGAACCGTAGCGGGTGTGG..................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AAAGACAGCGAGCGAGAGAGA.................................................................... 21 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................AGTGAGACAGAGGAGAGTGGAA................................................. 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................TAGTTTTCCGCCTCGAGTCGT.............................................................................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GTGAGACAGAGGAGAGTGGAA................................................. 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GAGTCGCAGGATGTTGAC....................................... 18 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................CGAGCGAGAGAGAGAGAGA.............................................................. 19 0 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................GCTAAGGATGTTGATGCC.................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
.............................................GCGCGGTTAGTACTTATCC.......................................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................GTGAGACAGAGGAGAGTGGA.................................................. 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0
......................................AGTGGGAACGATGTTA.................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGACAGAGGAGAGTGGA.................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..............................................CGAGGGTAGGACGTTTCC.......................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
...........................GCGGGTGTGGGAGCGGGT............................................................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................GACAGAGGAGAGTGGAA................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..............................................CGCGGTTAGTACTTTGCG.......................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

##########################################################################################################################################################################################################################################################
TTGCCTCTTTGCCCTCGACCTTGGCATCGCCTACACCCTCGCCCTTGCTCCAATCATGAAAAGGCGCGGCTCAGCAGGGATTTATTTACCGTATATATGGCGACACGCACACATGTATACATATACACGGAGCAGACATACGTCGCACCAGAAGCACGGCTTCTCTGTCGCTCGCTCTCTCTCTCTCTCTCCTCTCAGCTTCCTACAACTACGGACCGCCTCCGATTTTCAACAGGCAAAAAAGACGCGG
*******************************************************************************..((..(((((.((((((.((.((............(((((((((((...(((((....)))))...)))))))))))..........)).)).))))......)).)))))....)).**************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M053
female body
....................................................................................................................................................................................CTCTCTCTCTCCTCTCAG.................................................... 18 0 1 10.00 10 8 0 0 0 0 0 0 2 0 0 0 0
..............................................................GGTGCGCCTCAGCAGGGCT......................................................................................................................................................................... 19 3 4 2.75 11 0 11 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTCTCTCTCCTCTCAGCT.................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TCTCTCTCTCTCCTCTCAG.................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................AAAGGCGCGGCTCAGCAGGGA.......................................................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCGCCTCCGATTTTCAACAGGCAA........... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TATACATATACACGGAGCAGACAT............................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................CAGCAGGGATTTATTTACCGTA............................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................AAAGGCGCGGCTCAGCAGGGATTTAT..................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................ATGAAAAGGCGCGGCTCAGC............................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CAGCTTCCTACAACTACGG.................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................ATGAAAAGGCGCGGCTCAGCA.............................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................ACGTCGCACCAGAAGCACGGC.......................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCCGATTTTCAACAGGCAAAA......... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................ATGGCGACACGCACACATGTATACATAT.............................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................ATGGCGACACGCACACATGTA..................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TCAACAGGCAAAAAAGACGCG. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................GAAAAGGCGCGGCTCAGCA.............................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................GGCGCGGCTCAGCAGGGA.......................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................CGGCTCAGCAGGGATTTA...................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................TTTTCAACAGGCAAAAAAGAC.... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCCGATTTTCAACAGGCAA........... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................TCAATCATGAAAAGGCGCGGCT................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................GAAAAGGCGCGGCTCAGC............................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................ACGTCGCACCAGAAGC............................................................................................... 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................CGGCTCAGCAGGGATTTATTT................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................CACCCTCGCCCTTGCTCCAAT.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................CCCTTGCTCCAATCATGAA.............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................ATGGAGACACGCACACATGTA..................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................TGAAAAGGCGCGGCTCAGCAG............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTCCGATTTTCAACAGGCAAAAAAGA..... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TCCGATTTTCAACAGGCAAA.......... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................GGCGCGGCTCAGCAGGGATTT....................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................ACGGAGCAGACATACGTCGC........................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGGACCGCCTCCGATTTTCAA.................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................CCACCCTCGGCCTTGCT......................................................................................................................................................................................................... 17 2 10 0.30 3 0 0 0 3 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TCTCAGGTTCCTAGAACT........................................ 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................CTAATCATGAACAGGCGAG...................................................................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................GTGCGCCTCAGCAGGGCT......................................................................................................................................................................... 18 3 19 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................AATCATGACCAGGCGAGG..................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCTCTCTCCTCTCAACTTG................................................ 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TCGCTCTCTCTCTCTCTCTTC.......................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
................................CCACCCTCGTCCTTGCT......................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1333705-1333954 + dsi_19457 AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGATGTG--GGAGCGGG--AACG-AGG----TTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATACCGCTG-TGCGT--GTGTACA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCGAGAG-------------AGAGAGA---------GAGAGGAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAAGTTGTCCGTTT-TTT---------------------------------------CTGC--------GCC
droSec2 scaffold_6:1553336-1553593 + AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGATCTG--GGAGCGGG--AACG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATACCGCTG-TGCGT--TTGTACA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCGAGAG-------------AGAGAGA----GAGA-GAGAGGAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAAGTTGTCCGTTT-TTT---------------------------------------CTGC--------GCC
dm3 chr3R:1438096-1438354 + AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGGTGTA--GGAGCGGG--AACG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATACCGCTG-TGCGT--GTGTGCA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCGAGAG-------------AGAGAGA----GAGAGGAGAGGAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAAGTTGTCCGTTT-TTT---------------------------------------CTGC--------GCC
droEre2 scaffold_4770:1709194-1709418 + AA-C------------GTAG------------AA---------ACGGGA----------A----------------------------------------------------------------CTAGG--ACTGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TTGTCCCTAAATAAATGGCATATATACCGCTG-TAGGT--GTGTACA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCG-----------------AGAGA-G--------------GAGAGTCGAAGGATGTTG-----ATGCCTGTCGGAGGC-------TGTCCGTTT-TTT---------------------------------------CTGC--------GCC
droYak3 3R:17403524-17403764 + AA-C------------GAAG------------AA---------ACGGGA----------A----------------------------------------------------------------CTAGG--ATCGTAGCGG--------GAGCGGG--AGCG-AGATTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTACCTAAATAAATGGCATATATACCGCTG-TGCGT--GTATATATGTATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGGCAGCGAGCGAGA------GT---GAAAGAGA-G--------------GAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGC-------TGTCCGTTT-TTT---------------------------------------CTGC--------GCC
droEug1 scf7180000409766:396194-396421 + AA-C------------G-----------------------------GGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGATTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATCGCTG-TGAGT--GTG--------TACATATATGCTTCGTCTGTATGCAGCGT------------GG--TTTTCGTG-----------------------------------T--------CAGAGAGAGA----------GAGAGAGAGA----GAGT---CGGAGAGAGG--------------GAGTACCAAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAA-TGTTCCGTTT-TTT---------------------------------------CTAC--------GCC
droBia1 scf7180000302155:3330097-3330332 - AA-C------------GG-G------------AAACGGGAA--GCGGGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGGCCCTAAATAAATGGCATATATATCGCTG-TGCGT--GTG--------TGTATATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CTGAGAGAGA--------------------------GT---CGAAGAGAGG--------------GAGTACCGAAGGATGTTGATGTGATGCCTGGCTGAGGCTAAAAGTTTTCCGTCT-TTT---------------------------------------CTGC--------GCC
droTak1 scf7180000415754:354523-354763 - AA-C------------GG-G------------AAACGGGAA--GCGGGA----------ACTGGAA----------------------------------------------------------CTGGA--ACCGT--------------AGCAGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATTGCTG-TGCGT--G----------TGTATATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CAGAGAGAGAGAGA----------G----------ACT---CAAAGAGAGG--------------GAGTACCGAAGGATGTTG-----ATGCCTGGCGGAGGCAAAAAGTTTTCCGTTT-TTT---------------------------------------CTGC--------GCC
droEle1 scf7180000491021:723-963 - AA-C------------GG-G------------AAACGGG-A--GCGGGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATCGGTG-TTTG--------------TGTGTATATGCCTCGTCTGTATGCAGCGT------------GG--TCTCCGTG-----------------------------------C--------CAGAGAGAGAAAGA----------G----------AGCCAGCGGAGAGAGGGAGT-----CC---GAGTACCGAAGGATGTTG-----ATGCCTGGCGGAGGCGAAAAGTTTTCCGTTT-TTT---------------------------------------GTGC--------GCC
droRho1 scf7180000760205:9650-9891 - AA-C------------GG-G------------AAACGGG-A--GCGGGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATCGCTG-TTTG--------------TGTGTATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CAGAGAGAGAAAGA----------G----------AGCCAGCGGAGAGAGGGAGT-----AC---GAGTACCGAAGGATGTTG-----ATGCCTGGCGGAGTCGAAAAGTTTTCCGTTTTTTT---------------------------------------CTGC--------GCC
droFic1 scf7180000453850:840169-840404 + AA-G------------GATG------------TA---------GCGGGA----------A----------------------------------------------------------------CTGGA--GCCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATATCGCAG-TG----------------TGTGTATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CAGAGAGAGA----------GAGAGAAAGAAATAGAG---GCGGAGAGAGG--------------GAGTACCGAAGGATGTTG-----ATGCCTGGCTGAGGCGAAAAGTTTTCTGTTTTTTT---------------------------------------CTGC--------GCC
droAna3 scaffold_13340:18625587-18625802 - GG------------------------------G-------A--GCGGGA----------ACGTTTA----------------------------------------------------------CGGGA--ACGGA--------------AGCGGG--AACGGAG----GTTAGT---ACTTTTCCGCGCCGTA-TCGTTCCTAAATAAATGATATAGGTAT-------------------A--TATAAGTATATGCCTCGTCTGTATGCAGCGT------------GC--TCTTTGGGAGAACG-------------------------------------------TGA----GTGAGACGGCGAACTA------A-------AGAGAGAGG--------------GAGTTCCGAAGGATGTTG-----ATGCCTGGCGGAGGCGAAAACT----------TTT---------------------------------------CTGC--------GCC
droBip1 scf7180000395652:543579-543796 + GG------------------------------G-------A--GCGGGA----------ACGTTTA----------------------------------------------------------CGGGA--ACGGT--------------AGCGGG--AACGGAG----GTTAGT---ACTTTTCCGCGCCGTA-TCGTTCCTAAATAAATGATATAGGTAT-----------------ATA--TATAAGTATATGCCTCGTCTGTATGCAGCGT------------GC--TCTTTGGGAGAACG-------------------------------------------TGA----GTGAGACGGCGAACTA------A-------AGAGAGAGG--------------GAGTTCCGAAGGATGTTG-----ATGCCTGGCGGAGGCGAAAAGT----------TTT---------------------------------------CTGC--------GCC
dp5 2:17303726-17304009 + GG-C------------GG-GCGGCAAATATTCAAACGGGACACACAGGATATATGTATTCCCTTTACACGCACACAAGCACAGCCCGATGCTGGCGATGATGC----------------GCAAAGTGTA--GT-------------GGGTAGCGAGA-GGAG-AGGTTAGTTAGT---ATTTTTCCGCGCCGTG-TCGTCCCTAAATATATTGCATATATAT-------------------G--TATGTGTATATGCTTCGTCTGTATGCAGCGT------------GG--TCTTCGTC--------------------------G--------C------TC----------------------------------A-------CGAGGGAAG--------------GAGTACCGAAGGATGTTA-----ATGCCTTTCAGAGGCAAAAAGTTTTCAAT---TTT---------------------------------------CTGC--------GCC
droPer2 scaffold_0:11148909-11149192 + GG-C------------GG-GCGGCAAATATTCAAACGGGACACACAGGATATATGTATTCCCTTTACACGCACACAAGCACAGCCCGATGCTGGCGATGATGC----------------GCAAAGTGTA--GT-------------GGGTAGCGAGA-GGAG-AGGTTAGTTAGT---ATTTTTCCGCGCCGTG-TCGTCCCTAAATATATTGCATATATAT-------------------G--TATGTGTATATGCTTCGTCTGTATGCAGCGT------------GG--TCTTCGTC--------------------------G--------C------TC----------------------------------A-------CGAGGGAAG--------------GAGTACCGAAGGATGTTA-----ATGCCTTTCAGAGGCAAAAAGTTTTCAAT---TTT---------------------------------------CTGC--------GCC
droWil2 scf2_1100000004943:6089874-6090175 + AA-C------------CC-A------------AAGAG------AAGGAT----------G------------------------------ATGATGATGATGTTGAGATGGTGAGGATGGCAAAGGGCAATTCCGG--------------AGAGAG--GAAG-AGGTTAGTTGCTTGGTTTTTTCCGCGCCGTG-TCGTCCCTAAATAAATTGCATATATGTA-------TGT--------A--TATACATATATGATTCGTCTCTCCGTTTC------------------------GGTA-CTG-GTATTGGTAGTAGTCTTCG-TCGTCGTACCCGTGTACCCGAAA------------------------------------GTAGAGTAGGAGT-----AAGTAACGAAACGAAGGATTTTT---TAATGCCTTGCGGTGGCAAAAAAATGAACAAAA-TTT---------------------------------------CCGCTACAAATGGCC
droVir3 scaffold_12855:8280089-8280350 + ACACAGGCACCCACACGA-------------------------------------------------------------------------CGAAGATGATGC----------------GCAAAGTGTA--GCCGCAACGTG-----------CGG--AGAG-AGGTTAGTTGGT---ATTTTTCCGCGCCGTA-TCGTCCCTAAATATATTGCATATATATATACA-TATAT--ATTTATA--TATATATATATGCA---------CGCA-CGT--ACACACTCGCTG--TATT--GGTAACTGTGTGTTGGT-GTACT------TCGTCGTGC----CTGCC-----------------------------------------CGAGAGCAG--------------GAGTACCGAAGGTTTTTT-----CTTTTTTTTTT--T-------TTATTTGTGC-TTT---------------------------------------CCTC--------CTT
droMoj3 scaffold_6540:23507814-23508041 + GA-T------------G---------------A-------T--GCGCAA----------A----------------------------------------------------------------GTGTA--ACCGCAACGTG-----------AGG--AGAG-AGGTTAGTTGGT---ATTTTTCCGCGCCGTA-TCGTCCCTAAATATATTGCACATATAAATATG-TATAT--GTA--------AATATATA---------TGTACGCA-CGT--ACACTCACGCTGTGTATT--GGTAACTGTGTGTTGGT-GTACTTTACT-TCGTCGTGC----CTACC-----------------------------------------CGAGAGCAG--------------GAGTACCGAAGGTTTTT---------------------------TTATACGCTT-TTC---------------------------------------CCCC--------CTT
droGri2 scaffold_15074:4882032-4882313 + AG-C------------AGCG------------AA---------ACGTG-------------------------------------------------------------------------------CG--GA-------------GCGGAGTGAGAGAAAG-AGGTTAGTTGGT---ATTTTTCCGCGCCGTCTTCGTCCCTAAATATATTGCGTATATATATACAATATACATA----------TATATGTATG---------TTCGCA-CACACACACGCGCGCTG--TATT--------TGTGTATTGGT-GAACTTTATTGCCGTCGTGCT-TTCTGCC-----------------------------------------CGAGAGAAG--------------GAGTACCGAAGGTTTTTT-----TTCTTTTTTTT--T-------TAATATG--C-TTTCCTCCTTTTTGCAGAAAAGCGGCGAACGCACACAATTTTTTTT-GCTGCT-GGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGATGTG--GGAGCGGG--AACG-AGG----TTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATACCGCTG-TGCGT--GTGTACA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCGAGAG-------------AGAGAGA---------GAGAGGAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAAGTTGTCCGTTT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGGATGTTG-----ATGCCTGGC................................................................................2112.00200010000100000000
...........................................................................................................................................................................TAGT---ACTTTTCCGCGCCGAG-T....................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
...................G------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTA...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAGTCGAAGGATGTTG-----.........................................................................................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................CTTCGTG-----------------------------------C--------CGAAG----------AGACAGCG..........................................................................................................................................................2111.00100000010000000000
....................................................................................................................................................................................TTTTCCGCGCCGAG-TCGTCCC..............................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
........................................................................................................................................................................................................................................................................................................GTG-----------------------------------C--------CGAAG----------AGACAGCGAGC.......................................................................................................................................................2011.00100000000001000000
............................................CGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGG..........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
.....................................................................................................................................................................................................................................................................TCTGTATGCAGCGT------------GG--TCTT.................................................................................................................................................................................................................................2011.00100000000000010000
...............................................................................................................................................................ACG-AGG----TTAGT---ACTTTTCCGCGC..........................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
...........................................................................................................................................................................................CGCCGAG-TCGTCCCTAAATAAA......................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
................................................................................................................................................................................................................................................CA--TATGTATATGTGCCTCGTC.................................................................................................................................................................................................................................................................2111.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTTGTCCGTTT-TTT---------------------------------------...............1911.00100000000000001000
..........................................................................................................................................................................................................................................................TATGTGCCTCGTCTGTATGCA.........................................................................................................................................................................................................................................................2111.00100000000010000000
..............................................GGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGG..........................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................CGAGCGAGAG-------------AGAGAGA---------GA...................................................................................................................1970.14100000000000100000
droSec2
AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGATCTG--GGAGCGGG--AACG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATACCGCTG-TGCGT--TTGTACA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCGAGAG-------------AGAGAGA----GAGA-GAGAGGAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAAGTTGTCCGTTT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................TTAGT---ACTTTTCCGCGCCGAG-.....................................................................................................................................................................................................................................................................................................................................2111.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTG-----ATGCCTGGCGGAGGC..........................................................................2111.0011000
.A-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--A....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTG-----ATGCCTGGCGGAGG...........................................................................2111.0010010
.......................................................................................................................................................................TAGTTAGT---ACTTTTCCGCGCC.........................................................................................................................................................................................................................................................................................................................................2111.0011000
.......................................................................................................................................................................................................................................................................TGTATGCAGCGT------------GG--TCTTCGT..............................................................................................................................................................................................................................2111.0010010
..................................................................................................................................................................................ACTTTTCCGCGCCGAG-TCGTCCC..............................................................................................................................................................................................................................................................................................................................2311.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................G-------------AGAGAGA----GAGA-GAGAGG...............................................................................................................18200.0510100
dm3
AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGGTGTA--GGAGCGGG--AACG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATACCGCTG-TGCGT--GTGTGCA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCGAGAG-------------AGAGAGA----GAGAGGAGAGGAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAAGTTGTCCGTTT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................A--ACCGTAGCGGGTGTA--GGAGC...............................................................................................................................................................................................................................................................................................................................................................................21141.00410000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205001000000000000000000000000000000000000000000010000050000000001000000002001000401000000000000000000000000000000000000000000000200000000000000000000102000000130000001000000001210000010
.........................................................................................................................................................................................................................TATACCGCTG-TGCGT--GTGTGC.......................................................................................................................................................................................................................................................................................21137.00370000000000000000000000000000000000000000110001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044300220010010000000000000000000000000000000000010010000000000000000000000211000000000000000000000000000000010000000000000000000000200020000000000100010001000000000000000000000001100001000
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATGTTG-----ATGCCTGGCGG..............................................................................21113.00130000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000511001000002000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAGAGGAGAGGAGAGTCGAAG.....................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000100000000000000000000000000000000000000000000000000000001400100000000000000000101000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTCGAAGGATGTTG-----ATGC.....................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000001000000600000000010000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTCGAAGGATGTTG-----ATG......................................................................................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000400000000010000000000000000000000000
...............................................GA----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGGTG........................................................................................................................................................................................................................................................................................................................................................................................21110.00100000000000000000000000000000000000010010010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000002000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCGTG-----------------------------------C--------CGAAG----------AGACAGCGAG........................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000020000000000000001400000000000000000000000000000000000
................................................A----------G----------------------------------------------------------------CTGGA--ACCGTAGCGGGTGT.......................................................................................................................................................................................................................................................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000200002000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000001000000
.......................................................................................................................................................................................................................................................................TGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------..........................................................................................................................................................................................22110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010500000000000000000000010000000000000000000000000012000000
.................................................................................................................................................................................................................................................................................GT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGA...............................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000022000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................ATATGTGCCTCGTCTGTATGC..........................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000101000000000020000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000
............................................................................................................................................GGTGTA--GGAGCGGG--AACG-AGG..................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000001000000000000000000000000000000000
...............................................................................................................................GA--ACCGTAGCGGGTGTA--GGAG................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000030000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000
..............................................................................................................................................................................................................................................................TGCCTCGTCTGTATGCAGCGT------------.........................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300020000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGTATGCAGCGT------------GG--TCTTCGT..............................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000002000000110000000000000000000000000000000000
...........................................................................................................................................................................TAGT---ACTTTTCCGCGCCGAG-T....................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000002000201000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGTCCGTTT-TTT---------------------------------------CTGC--------G..2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000001000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTG-----------------------------------C--------CGAAG----------AGACAGCGAGCG......................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000101000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CGTCTGTATGCAGCGT------------GG--TCT..................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100100000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000
..........................................................................................................................................................................................................................................................TATGTGCCTCGTCTGTATGC..........................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TAGTTAGT---ACTTTTCCGCGCC.........................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000100110000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTCGAAGGATGTTG-----ATGCC....................................................................................2217.0070000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000010000000000000000101000000000000000000000000000000000
......................................................................................................................................................................................................................ATATATACCGCTG-TGCGT--GTG..........................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGAAGGATGTTG-----ATGCCT...................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GTATGCAGCGT------------GG--TCTTCGTG-----------------------------------..........................................................................................................................................................................................2117.0070000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000200000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGGATGTTG-----ATGCCTGGC................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTG-----ATGCCTGGCGGAGGC..........................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010
.......................................................................................................................................................................................................................................GT--GTGTGCA--TATGTATATGTGCCTCG...................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTTGTCCGTTT-TTT---------------------------------------CTG............2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AG----------AGACAGCGAGCGAGAG-------------AGA..................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000100000020000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCTGTATGCAGCGT------------GG--TCTTC................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000010000000000000000000000000010000000
.......................................................................................................................................TAGCGGGTGTA--GGAGCGGG--AA........................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000120000000000000000000000000000000000100000000000000010
........................................................................................................................................................................................................................................................................................................................................................................ACAGCGAGCGAGAG-------------AGAGAGA----..........................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000
....................................................................................................................................CCGTAGCGGGTGTA--GGAGCGG.............................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000200000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................AGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------..................................................................................................................................................................2116.0060000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000400000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGAGTCGAAGGATGTTG-----.........................................................................................2116.0060000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000100000000010000000000000000000000000
......................................................................................................................................................................TTAGTTAGT---ACTTTTCCGCGC..........................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000010
.......................................................................................................................................................................................................................................................GTATATGTGCCTCGTCTGTAT............................................................................................................................................................................................................................................................2116.0060000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................TGTGCCTCGTCTGTATGCAGC.......................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000001000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GTTAGT---ACTTTTCCGCGCCGA.......................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTG-----ATGCCTGGCGGAGGCT.........................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAGGAGAGTCGAAGGATG.................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000001000000010000000000000000000000000000000000
......................................................................................................................................................AGCGGG--AACG-AGGTTAGTTAG..........................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010100000000000000000000000100000000000000000001000000
.........................................................................................................................................................................................................................................................................TATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------.................................................................................................................................................................................2115.0050000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
AA-C------------GGAG------------AA---------ACGGGA----------G----------------------------------------------------------------CTGGA--.....................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................CCTCGTCTGTATGCAGCGT------------GG--.....................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................ATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------C................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGTTG-----ATGCCTGGCGGA.............................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010100000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GT---ACTTTTCCGCGCCGAG-TCG..................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................AGAGAGA----GAGAGGAGAGGAGA............................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001110000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................T------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACA.............................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................AG-TCGTCCCTAAATAAATGGC..................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAGAGTCGAAGGATGTT...............................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000101000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGC...........................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CTGTATGCAGCGT------------GG--TCTTCG...............................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGAAGGATGTTG-----ATGCC....................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTGCCTCGTCTGTATGCAGCG......................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................TTAGT---ACTTTTCCGCGCCGAG-T....................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGGATGTTG-----ATGCCTG..................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................AAG----------AGACAGCGAGCGAGAG-------------AG...................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................GCCTCGTCTGTATGCAGCGT------------G........................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000020000000000000000000000000
......................................................................................................................................GTAGCGGGTGTA--GGAGCGGG--A.........................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTG-----ATGCCTGGCGGAGG...........................................................................2114.0040000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................TACCGCTG-TGCGT--GTGTGCA--T...................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000100000000000000000000000
...........................................................G----------------------------------------------------------------CTGGA--ACCGTAGCGGGTGTA--....................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000010
...............................................................................................................................GA--ACCGTAGCGGGTGTA--GGAGC...............................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTCGTG-----------------------------------C--------CGAAG----------AGACAGCGA.........................................................................................................................................................2114.0040000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGTATATGTGCCTCGTCTGTA.............................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AAG----------AGACAGCGAGCGAGAG-------------AGA..................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAGAGGAGAGTCGAAGGA...................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAGTCGAAGGATGTTG-----ATG......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CCTCGTCTGTATGCAGCG......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGTTAGT---ACTTTTCCGCGCCGA.......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................................................................................................................................................................GTATGCAGCGT------------GG--TCTTCGTG-----------------------------------T--------.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................ATATGTGCCTCGTCTGTATGCA.........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GT--GTGTGCA--TATGTATATGTG........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AA-C------------GTAG------------AA---------ACGGGA----------A----------------------------------------------------------------CTAGG--ACTGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TTGTCCCTAAATAAATGGCATATATACCGCTG-TAGGT--GTGTACA--TATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGACAGCGAGCG-----------------AGAGA-G--------------GAGAGTCGAAGGATGTTG-----ATGCCTGTCGGAGGC-------TGTCCGTTT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................AGACAGCGAGCG-----------------AGAGA-G--------------GAG.............................................................................................................2111.0011000000
droYak3
AA-C------------GAAG------------AA---------ACGGGA----------A----------------------------------------------------------------CTAGG--ATCGTAGCGG--------GAGCGGG--AGCG-AGATTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTACCTAAATAAATGGCATATATACCGCTG-TGCGT--GTATATATGTATGTATATGTGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CGAAG----------AGGCAGCGAGCGAGA------GT---GAAAGAGA-G--------------GAGAGTCGAAGGATGTTG-----ATGCCTGGCGGAGGC-------TGTCCGTTT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTG-----ATGCCTGGCGGAGGC-------C..................................................................2211.00100100000000
droEug1
AA-C------------G-----------------------------GGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGATTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATCGCTG-TGAGT--GTG--------TACATATATGCTTCGTCTGTATGCAGCGT------------GG--TTTTCGTG-----------------------------------T--------CAGAGAGAGA----------GAGAGAGAGA----GAGT---CGGAGAGAGG--------------GAGTACCAAAGGATGTTG-----ATGCCTGGCGGAGGCTAAAA-TGTTCCGTTT-TTT---------------------------------------CTAC--------GCCSizeHit CountTotal NormTotal
No Reads
droBia1
AA-C------------GG-G------------AAACGGGAA--GCGGGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGGCCCTAAATAAATGGCATATATATCGCTG-TGCGT--GTG--------TGTATATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CTGAGAGAGA--------------------------GT---CGAAGAGAGG--------------GAGTACCGAAGGATGTTGATGTGATGCCTGGCTGAGGCTAAAAGTTTTCCGTCT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotal
No Reads
droTak1
AA-C------------GG-G------------AAACGGGAA--GCGGGA----------ACTGGAA----------------------------------------------------------CTGGA--ACCGT--------------AGCAGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATTGCTG-TGCGT--G----------TGTATATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CAGAGAGAGAGAGA----------G----------ACT---CAAAGAGAGG--------------GAGTACCGAAGGATGTTG-----ATGCCTGGCGGAGGCAAAAAGTTTTCCGTTT-TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotal
No Reads
droEle1
AA-C------------GG-G------------AAACGGG-A--GCGGGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATCGGTG-TTTG--------------TGTGTATATGCCTCGTCTGTATGCAGCGT------------GG--TCTCCGTG-----------------------------------C--------CAGAGAGAGAAAGA----------G----------AGCCAGCGGAGAGAGGGAGT-----CC---GAGTACCGAAGGATGTTG-----ATGCCTGGCGGAGGCGAAAAGTTTTCCGTTT-TTT---------------------------------------GTGC--------GCCSizeHit CountTotal NormTotal
No Reads
droRho1
AA-C------------GG-G------------AAACGGG-A--GCGGGA----------A----------------------------------------------------------------CTGGA--ACCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGTG-TCGTCCCTAAATAAATGGCATATATATCGCTG-TTTG--------------TGTGTATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CAGAGAGAGAAAGA----------G----------AGCCAGCGGAGAGAGGGAGT-----AC---GAGTACCGAAGGATGTTG-----ATGCCTGGCGGAGTCGAAAAGTTTTCCGTTTTTTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotal
No Reads
droFic1
AA-G------------GATG------------TA---------GCGGGA----------A----------------------------------------------------------------CTGGA--GCCGT--------------AGCGGG--AGCG-AGGTTAGTTAGT---ACTTTTCCGCGCCGAG-TCGTCCCTAAATAAATGGCATATATATCGCAG-TG----------------TGTGTATATGCCTCGTCTGTATGCAGCGT------------GG--TCTTCGTG-----------------------------------C--------CAGAGAGAGA----------GAGAGAAAGAAATAGAG---GCGGAGAGAGG--------------GAGTACCGAAGGATGTTG-----ATGCCTGGCTGAGGCGAAAAGTTTTCTGTTTTTTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotal
No Reads
droAna3
GG------------------------------G-------A--GCGGGA----------ACGTTTA----------------------------------------------------------CGGGA--ACGGA--------------AGCGGG--AACGGAG----GTTAGT---ACTTTTCCGCGCCGTA-TCGTTCCTAAATAAATGATATAGGTAT-------------------A--TATAAGTATATGCCTCGTCTGTATGCAGCGT------------GC--TCTTTGGGAGAACG-------------------------------------------TGA----GTGAGACGGCGAACTA------A-------AGAGAGAGG--------------GAGTTCCGAAGGATGTTG-----ATGCCTGGCGGAGGCGAAAACT----------TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................GCAGCGT------------GC--TCTTTGGGAGAA.........................................................................................................................................................................................................................2112.002000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGTTG-----ATGCCTGGCG...............................................................................1911.001100000
............................................................................................................................CGGGA--ACGGA--------------AGCGGG--AACGGAG----...............................................................................................................................................................................................................................................................................................................................................................2311.001000010
...........................................................................................................................................................................................................................................................................TGCAGCGT------------GC--TCTTTGGGAGA..........................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................................................................................................TCTGTATGCAGCGT------------GC--TCTTTG...............................................................................................................................................................................................................................2211.001000001
..........................................................................................................................................................................TTAGT---ACTTTTCCGCGCCGTA-.....................................................................................................................................................................................................................................................................................................................................2111.001000010
.................................................................A----------------------------------------------------------CGGGA--ACGGA--------------AGCGGG--AA........................................................................................................................................................................................................................................................................................................................................................................1920.501100000
droBip1
GG------------------------------G-------A--GCGGGA----------ACGTTTA----------------------------------------------------------CGGGA--ACGGT--------------AGCGGG--AACGGAG----GTTAGT---ACTTTTCCGCGCCGTA-TCGTTCCTAAATAAATGATATAGGTAT-----------------ATA--TATAAGTATATGCCTCGTCTGTATGCAGCGT------------GC--TCTTTGGGAGAACG-------------------------------------------TGA----GTGAGACGGCGAACTA------A-------AGAGAGAGG--------------GAGTTCCGAAGGATGTTG-----ATGCCTGGCGGAGGCGAAAAGT----------TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotal
No Reads
dp5
GG-C------------GG-GCGGCAAATATTCAAACGGGACACACAGGATATATGTATTCCCTTTACACGCACACAAGCACAGCCCGATGCTGGCGATGATGC----------------GCAAAGTGTA--GT-------------GGGTAGCGAGA-GGAG-AGGTTAGTTAGT---ATTTTTCCGCGCCGTG-TCGTCCCTAAATATATTGCATATATAT-------------------G--TATGTGTATATGCTTCGTCTGTATGCAGCGT------------GG--TCTTCGTC--------------------------G--------C------TC----------------------------------A-------CGAGGGAAG--------------GAGTACCGAAGGATGTTA-----ATGCCTTTCAGAGGCAAAAAGTTTTCAAT---TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................GTA--GT-------------GGGTAGCGAGA-GGAG-AG...................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................TGC----------------GCAAAGTGTA--GT-------------GGGTA.................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................AGTTAGT---ATTTTTCCGCGCCG........................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................CACACAAGCACAGCCCGATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................ATATGCTTCGTCTGTATGCAG........................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................ATGC----------------GCAAAGTGTA--GT-------------GGGTA.................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................TA--GT-------------GGGTAGCGAGA-GGAG-AG...................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................AGCCCGATGCTGGCGATGATGC----------------GC...............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
............................................................................................................................................................................................................................................................................GCAGCGT------------GG--TCTTCGTC--------------------------G--------C------TT----------------------------------...............................................................................................................................................2111.0010100000000
droPer2
GG-C------------GG-GCGGCAAATATTCAAACGGGACACACAGGATATATGTATTCCCTTTACACGCACACAAGCACAGCCCGATGCTGGCGATGATGC----------------GCAAAGTGTA--GT-------------GGGTAGCGAGA-GGAG-AGGTTAGTTAGT---ATTTTTCCGCGCCGTG-TCGTCCCTAAATATATTGCATATATAT-------------------G--TATGTGTATATGCTTCGTCTGTATGCAGCGT------------GG--TCTTCGTC--------------------------G--------C------TC----------------------------------A-------CGAGGGAAG--------------GAGTACCGAAGGATGTTA-----ATGCCTTTCAGAGGCAAAAAGTTTTCAAT---TTT---------------------------------------CTGC--------GCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................GT---ATTTTTCCGCGCCGTG-TC...................................................................................................................................................................................................................................................................................................................................2011.001000010
..................................................ATATGTATTCCCTTTACACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droWil2
AA-C------------CC-A------------AAGAG------AAGGAT----------G------------------------------ATGATGATGATGTTGAGATGGTGAGGATGGCAAAGGGCAATTCCGG--------------AGAGAG--GAAG-AGGTTAGTTGCTTGGTTTTTTCCGCGCCGTG-TCGTCCCTAAATAAATTGCATATATGTA-------TGT--------A--TATACATATATGATTCGTCTCTCCGTTTC------------------------GGTA-CTG-GTATTGGTAGTAGTCTTCG-TCGTCGTACCCGTGTACCCGAAA------------------------------------GTAGAGTAGGAGT-----AAGTAACGAAACGAAGGATTTTT---TAATGCCTTGCGGTGGCAAAAAAATGAACAAAA-TTT---------------------------------------CCGCTACAAATGGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................TGGTGAGGATGGCAAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................................................T----------G------------------------------ATGATGATGATGTTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
droVir3
ACACAGGCACCCACACGA-------------------------------------------------------------------------CGAAGATGATGC----------------GCAAAGTGTA--GCCGCAACGTG-----------CGG--AGAG-AGGTTAGTTGGT---ATTTTTCCGCGCCGTA-TCGTCCCTAAATATATTGCATATATATATACA-TATAT--ATTTATA--TATATATATATGCA---------CGCA-CGT--ACACACTCGCTG--TATT--GGTAACTGTGTGTTGGT-GTACT------TCGTCGTGC----CTGCC-----------------------------------------CGAGAGCAG--------------GAGTACCGAAGGTTTTTT-----CTTTTTTTTTT--T-------TTATTTGTGC-TTT---------------------------------------CCTC--------CTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................T--ACACACTCGCTG--TATT--GGTAAC.........................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCC-----------------------------------------CGAGAGCAG--------------GAGTACCGAAGG....................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GTGTGTTGGT-GTACT------TCGTCG............................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................T--GGTAACTGTGTGTTGGT-GTA..........................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................GATGC----------------GCAAAGTGTA--GCCGCA...............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................TATATATATACA-TATAT--ATTTATA--TAT.................................................................................................................................................................................................................................................................................2780.131000000000000000000000000010000000000000000000000000000000000000
droMoj3
GA-T------------G---------------A-------T--GCGCAA----------A----------------------------------------------------------------GTGTA--ACCGCAACGTG-----------AGG--AGAG-AGGTTAGTTGGT---ATTTTTCCGCGCCGTA-TCGTCCCTAAATATATTGCACATATAAATATG-TATAT--GTA--------AATATATA---------TGTACGCA-CGT--ACACTCACGCTGTGTATT--GGTAACTGTGTGTTGGT-GTACTTTACT-TCGTCGTGC----CTACC-----------------------------------------CGAGAGCAG--------------GAGTACCGAAGGTTTTT---------------------------TTATACGCTT-TTC---------------------------------------CCCC--------CTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................CGCAACGTG-----------AGG--AGAG-AGGTT................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droGri2
AG-C------------AGCG------------AA---------ACGTG-------------------------------------------------------------------------------CG--GA-------------GCGGAGTGAGAGAAAG-AGGTTAGTTGGT---ATTTTTCCGCGCCGTCTTCGTCCCTAAATATATTGCGTATATATATACAATATACATA----------TATATGTATG---------TTCGCA-CACACACACGCGCGCTG--TATT--------TGTGTATTGGT-GAACTTTATTGCCGTCGTGCT-TTCTGCC-----------------------------------------CGAGAGAAG--------------GAGTACCGAAGGTTTTTT-----TTCTTTTTTTT--T-------TAATATG--C-TTTCCTCCTTTTTGCAGAAAAGCGGCGAACGCACACAATTTTTTTT-GCTGCT-GGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:28 PM