ID:

dsi_19449

 Coordinate:

2l:20526374-20526588 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.6 -8.6 -8.6

Flybase annnotation

Antisense to CDS [2l_20526256_20526348_+]; CDS [2l_20526591_20526950_-]; Antisense to three_prime_UTR [2l_20526349_20526416_+]; three_prime_UTR [2l_20526499_20526590_-]; Antisense to exon [2l_20526256_20526416_+]; exon [2l_20526499_20526950_-]

No Repeatable elements found

Sense Strand Reads

############################################################################################################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATCGATTAAGGACCATCACGGCGCTAAGGACGAAACTGAGGATTTGAACGTAAACAAATCATTTAGTTGTTCCTAATCAATTATTAATTCTTCTATTTTTGTATAAGACAGCGAGATAATACAAGTTTTATTACAAAAATCTATTTTTTACTTGGATTTTTTTGGAATGTAGTTGCTAATTCTGCTCCACATACCACCACATAATCACACCGATGATTTTTCCTAAACTAATGACTGACTTTTATTTTCATAATTTTACAACAGATATGCGGTATTGAATATTCATAATTTAAAGAAAACGCCGGCGTGGTATC
***************************************************************************************************.......((......................((((((((((((((.........))))))))).......)))))..))***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
......................................GAGGATTTGAACGTAAACAAAT............................................................................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 1 1 0 0 0 0 0
...................................................................................................TTGTATAAGACAGCGAGATAATACA............................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.....................................TGAGGATTTGAACGTAAACAAATAAT............................................................................................................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................TCAATTATTAATTCTTCTATTTTTGTA................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
AATCGATTAAGGACCATCACGGCGC.................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................TTGTATAAGACAGCGAGATAATA................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................AAACTGAGGATTTGAACGTAAACAAA................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............................................................................................TCTATTTTTGTATAAGACAGCGAGA...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................AGACAGCGAGATAATACA............................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................................TTTGTATAAGACAGCGAGATAATACA............................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................AGGACGAAACTGAGGATTTGAACGTAAAC................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................AAGACAGCGAGATAATACAAGTTTTAT....................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................TTTTTGGAATGTAGTTGCT......................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............ATCACGGCGCTAAGGACGAAACT..................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................CTATTTTTGTATAAGACAGCGAGA...................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................TAAGACAGCGAGATAATACAAGTT........................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1
.................................................................................................TTTTGTATAAGACAGCGAGATAATA................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................CTGAGGATTTGAACGTAAACA.................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................TTTTGTATAAGACAGCGAGATAATACA............................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...............................CGAAGCTGCGGATTTGAA.......................................................................................................................................................................................................................................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.................................AAACTGAGAGTTTGAACGTT...................................................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 1 0 0 0
...............................CGAAGCTGAGGATTTGCA.......................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................TTAAAGAAAACGCGGGC........ 17 1 11 0.09 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#############################################################################################
TTAGCTAATTCCTGGTAGTGCCGCGATTCCTGCTTTGACTCCTAAACTTGCATTTGTTTAGTAAATCAACAAGGATTAGTTAATAATTAAGAAGATAAAAACATATTCTGTCGCTCTATTATGTTCAAAATAATGTTTTTAGATAAAAAATGAACCTAAAAAAACCTTACATCAACGATTAAGACGAGGTGTATGGTGGTGTATTAGTGTGGCTACTAAAAAGGATTTGATTACTGACTGAAAATAAAAGTATTAAAATGTTGTCTATACGCCATAACTTATAAGTATTAAATTTCTTTTGCGGCCGCACCATAG
*****************************************************************************************************************************************.......((......................((((((((((((((.........))))))))).......)))))..))*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
.........................................................................................................TTCTGTCGATCTATTAGTTTCA............................................................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................AAGGATTTGATCACTGAAGGA.......................................................................... 21 3 8 0.25 2 0 0 2 0 0
.................GTTCCGCGATTACTGCTTGG...................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0
..........................................................................................................................................................................................................................................................TATTAAATTGTTGTCTAGA.............................................. 19 2 4 0.25 1 0 1 0 0 0
.......................................TCCTAAGCTTGGATCTGTT................................................................................................................................................................................................................................................................. 19 3 15 0.13 2 0 0 0 0 2
................................................................................................................................................................................................................................................AAAAAAAAAGTATCAGAATGTT..................................................... 22 3 19 0.11 2 0 0 2 0 0
............................................................................................AGGTAAAAACATATTTTGT............................................................................................................................................................................................................ 19 2 13 0.08 1 0 0 1 0 0
..........................................................................................................................................................................................................................................................................................................CTGCGGCCCCACCATA. 16 2 13 0.08 1 0 1 0 0 0
............................................................................................................................................................................................................TAGTGTGGGTCCTAAAAA............................................................................................. 18 2 14 0.07 1 0 1 0 0 0
...................GCGGCGATTACTGCTTT....................................................................................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 1
......................................................................................................ACATTTTGTCGCTCTAT.................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1
.............................................................TAAATTAACAAGGATT.............................................................................................................................................................................................................................................. 16 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20526324-20526638 - dsi_19449 AATCGATTAAGGACCATCACGG-CGCTAAGGACGAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----AA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------TAATACA--AGTTT-TATTACAAA------AATC----T--ATTT-T---TTACTTG-----------------------------GAT-------------------------------------------------------------T--TTTTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCTAAT-TC-------TGCTC---CACATACCACCAC-----------ATAATCACACC---------------G-ATGA--TTTTTCCTAA---ACTAATGAC--TGACTT-TTATTTTCATAAT-TTTACAACAGAT---------------------------ATG-CGG-TATT-G-A----A-TAT----------T-CA-TAA-TTTAAAGAAAACG-CCGGCGTGGTATC
droSec2 scaffold_18:1013788-1014102 - AATCGATTAAGGACCATCACGG-CGCTAAGGACGAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----AA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------TAATACA--AGTTT-TATTACAAA------AATG----T--GTTT-T---TTACTTG-----------------------------GAT-------------------------------------------------------------T--TTTTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCTAAT-TC-------TGCTC---CACATACCACCAC-----------ATAATCACACC---------------G-ATGA--TTTTTCCTAA---ACTAATGAC--TGACTT-TTATTTTCATACT-TTTATAACAGAT---------------------------ATG-CGG-TATT-G-A----A-TAT----------T-CA-TAA-TTTAAAGAAAACG-CCGGCGTGGTATC
dm3 chr2L:21094771-21095100 - AATCGATTAAGGACCATCACGG-CGTTGAGGACGAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----AA------CCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------TAATACA--AGTTT-TATTACAAA------AATG----T--GTTT-T---TTACTTG-----------------------------GATAC---CCAGGTGGTCC-CA------------------------------------------C--CTGTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCTAAT-TC-------GGCTC---CACATACCACCAC-----------ACAATCACACT-----------------TCAA--TTTTTCCTAC---ACTAATGAC--TGACTT-TTATTTTTATAAT-TTTACAACAGAT---------------------------ATG-CGG-TATT-GAA----A-TAT----------T-CA-TAA-TTTAAAGAAAACG-CCGGCGTGGTATC
droEre2 scaffold_4845:3397278-3397589 + AACCGATTAAGGACCATCACGG-CGCTGAGGAGCAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCCT----TA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--CTTTGTATAAGTCAGCGA---GA---------TAATACA--AGTTT-TCATACAAA------AAGGT---G--GTTT-----TTACTTG-----------------------------GAAA----CCAGGT-GCAC-C-----------------------------------------------ATA--------------------------------------------------------------------------------------------------------------------------------------------TGAT-TC-------TGCTT---CACATACCACCAC-----------AAAATCATACC---------------A-TTGA--TGTTTCCTAA---ACTAATGAC--TGACTT-TTATTTTCATAAT-TTTACAGCAGAT---------------------------ACG-TGG-TATT-GAA----A-TAT----------T-CG-TAG-TTTAAAGGAAACG-CCGGCGTGGTATC
droYak3 2R:1672487-1672810 + AACCGATTAAGAATCATCACGG-CGCTGAGAACCAAACTGAGGATTTGAACTTAAACA-------AAT-------------------------------------------------------AT----------------A-----------CTAGTTGTTCCT----AA------GCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACA---A---GA---------CAATACA--AGTTT-TAATACAAA------AAGC----T--GGTTTT---TTACATG-----------------------------GAAA----TCAGGT-CCAC------------------------------------------------TATATGATAAGT------------------------------------------------------------------------------------------------------------------------------AGTTGCAAAT-TC-------TGCTC---CACATACCACCAC-----------AAAATCATACC---------------A-CTCA--TGTTTTCTAA---ACTAATGAC--TGATTT-TTATTTTCATAAT-TTTATAGCAGAT---------------------------ACG-TGA-TATG-GAA----A-TAT----------T-CA-CAA-TTTAAAGGAAACG-GCGTCGTGGTATC
droEug1 scf7180000409767:217496-217837 + CATCGATTAAAGACTATCACGG-CGGTGAAAACCAAACTGAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTA-----A------AAAAAT--ATACATA-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGAAA---GA---------TAATACA--AGTCC-TAATGCAAT------AAAGA---TGTGTTA-T---TTATGT-----------------------------------AAGGAAA-TGGAT-TGTTAGTGAAAGGG-----------------------------------------------------TTTATAGTACATAT---------------------------------------------------------------------------------------------------------------------------------------CTTACCAGTTCTGTGAATTAGGGAAATAATTTG---------------A-CTTATTTAGTTCCTAAACAACTAATGACTTTGACAT-TTATTTTCATAAC-TTTACAATAGAT---------------------------AAA-TGAGTAAG-AGA----T-TAT----------T-TATTAA-TTTAAAGGAAACG-CCGGCGAGGTATC
droBia1 scf7180000302422:7009804-7010178 + CATCGATTGAAGACCATCACGG-CGTTGAGAACCAAACTGAGGTTATGAATGTAGAAA-------AAG-------------------------------------------------------CT----------------A-----------TTAGTTGCTCTA-----A------CAAATT-------TT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACTAAGA---GA---------TAATACA--AGTCA-TAATGCAAT------AAAGA---C--GTTTTT---TT--GTG-----------------------------TATGTGTGACGA-TAGAT-TCTTCGAAAAAATGGAAG----------------------TTAAT---------------AAAACAAAT------------TTT-AATATATATA-------------------------------------------------CATTATTGAG-----------------------------------------TTCGTATATTT---CT---TACTTACCAAAACAACAAGTCCAAAAAATTAAATT---------------A-TTTT--ATTTTCCTAT---ACTAATGAC--TGACTT-TTATTTTCATAAT-TTTACAGTAGAT---------------------------AAA-CGA-TATT-AAA----AGTAT----------T-TGTTAA-TTTAAAGGAAACG-ACGACGTGGTATT
droTak1 scf7180000415708:360900-361298 + CATCGATTAAAGACCATTACCG-CGCAGAGGACCAAACTAAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTA-----A------AAAATT--ATAAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACGAAAA---GA---------TAATACA--AGTCA-TAATGCAAT------AAAGT---C--GTTTTT---TT--ATG-----------------------------TATATGTGGCTA-TGGAT-TCTTTGTGAAAGCGAGAGTAAAAATAATAACAGTAATTTCTCATTTAA----------------------ATATTATAT--TTTTAA-------AAT----------------------------------------------------TTAAA-----------------------------------------TTTTTGTTTT---TTT---TACTTACCAGCACAATTAGTTCATAAAATCAAAGT---------------A-CTTTTCGTGTTCCTAA---ACTAATGACTTTGATTT-TTATTTTCATTAT-TTTACAGTAGAT---------------------------AAA-TGA-TAAT-GAA----A-TAT----------T-TATTAA-TTTAAAGGAAACG-CCGACGTGGTATT
droEle1 scf7180000491186:1129775-1130101 - AATCGATTAAAAACCATCACGT-CGCTGAGAACCAAACTAAAGTTATAAATGTAAAAA-------AAC-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTT----AA------AAAGTTTGATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAA--A---GA---------AAATAAA--AGTCA-TAATGCAAT------AAATA---A--GTTTTTTG-ACAGTTAAAAGG--AAACTACAGAAATATTTAATTAGAT-------------------------------------------------------------T--TT-AAGGAAGGGAAA------------ACATATTTT-AT-------AATTTTTAA---------------------NNNNNNNNNNNNNNNNNNNN-----------------------------------------------------------------------------------------------------------------------------------------------------C--TGAATT-TTATTTTTATAATGTTTACAGTAGAT---------------------------AAA-TGA-TAGT-AAA----A-TAT----------T-TATTAA-GTTAAAAGAATCG-CCGGCGTGGTATC
droRho1 scf7180000771933:6189-6586 - GATCGATTAAAGATCATCACGG-CGCTAAGAACCAAACTGAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTT----AA------AAAATT--AAAAACT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTATAT--TTTTGTATAATACAG--A---GA---------TAAAACA--AGTTA-ACATACAAT------AAAGA---A--GTTTTTTTCTTAACGT-----------------------------CGTT----TCGTCA-TTCC-T-TT----------------------------------------GGA----------------------ATAGTACATATTTT-GA-------AATTTTTAATATTAAGCAGCATCAAAAAGT--------------------CACTATTAAA-----------------------------------------TTTGTATACTTTGAGCCAATACTTACCAACAGAGTGAATTCATAAAATCATAGT---------------A-TTTATTTGGTTCCTAT---CCTAATGACTTTGACTT-TTATTTTCATAATGTTTACAGTAGAT---------------------------AAA-TGA-TAGG-GAA----A-TAT----------T-AGTTAA-TTTAAAGGAAACG-CCGGCGTGGTATC
droFic1 scf7180000453842:573520-573851 - AATCGATTAAAGACCATCTCCA-CACTAAAAACAAAACTAAGGTTATGAATGTAAACA-------ATT-------------------------------------------------------CA----------------A-----------TTAGTTGTTCTT----AA------AAAATT----AAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTTTAT--TTTTGTATAAGACAA-AA---GT---------TATTAAA--AAGCA-TATTGCAAA------GAGATTTAT--GTTTTC---TTACTGA-----------------------------AGTA----TCGGGA-GTAC-C-TA----------------------------------------TAA-ATA------GG------------------------------------------------------------------------------------------------------------------------------A--------TTCGAATAATTGTTTA---CACTTACCAACAC-----------AAAA----ATT---------------G-TGTA--TTTTTCCTAAA--ACTAATGACTTTGACTT-TTATTTTCACAATGCTTACATAAGAT---------------------------AAAAAGA-TAAT-CAA----A-TATTTA-------T-TATTAA-TTTAAAGGAAACG-TCGGCGTGGTATT
droKik1 scf7180000302643:124959-125343 - AATAGATTGAAGGTTGTGGCAG-CGCTAAGGACCAAGCTGAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A----------TTTAGTTGTTTTA----TTA-AAAGACCCTA--ATAAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------ATATATATTTTTGTATAAGACCAGAAGTTGA---------TAATACA--AGTTGATAATACAAAATCAAAAGAG----A--GTTT-T---ATATTTAGAAGATAAGGGTAAGGG------------------------------------------------G----------------------TTATT---------------TAAGGATAT------------TTT-GATTATTATGAGTTTTAA----------------------------------------------TTG----------------------------------AGTTGTAGAT-TG-G-----TATTC---CCTTTATTATAGA-----------ATAAATACATT---------------GATTTT--TCGTTCCTAA---ACTAATGACTTTGATTT-TTATTTTTATAAAGTTTACAGTACAT---------------------------AAT-TGT-TATT-GGA----A-TATTTT-------TATATTAATTTTAGAGGAAACG-CCGGCGTGGTATT
droAna3 scaffold_12943:3644028-3644350 + AATCGATTGAAAATAATTGGGG-CGCTGAGAACCAAACTAAAGTTATGAACATAATCA-------AAG-------------------------------------------------------TT----------------A-----------GTAGTTGTTTTC-TGTAGAAAAGAAAAGTT--TTAAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTTTAT--TTTT-TATAAGACAT--T---CA---------TAATAAA--AGTGC-TTGTGAAAA------AATA----T--GTTTTC---TTTTAT--------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------CCTTCCAGTCTTT---------ATAATC--ATTGATGAAAAAGGCTTTT-CTAATTAGGTTCCTAA---ACTAATGACTTTGATTT-TTATTTTCACATGGTTTACAGTGGAT----TT---------------------AAG-TGA-TGAT-TAA---AA-AATAAAAAGTGATT-TCTTAA-ATTAGAGAAAACG-CCGGCGTGGTATT
droBip1 scf7180000396433:527966-528083 + AATCGATTGAAGATCATTGGGG-CTCTGAGAACCAAACTAAAGTTATGAATATAATCA-------AAG-------------------------------------------------------TT----------------A-----------GTAGTTGTTTTTCTGTAGAAAAGAAAAGTT--TAAAGTT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTT-TATAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group1:4997388-4997567 + CATCGATTAAAGCTCATCACGG-GGCTGAAAAAACAATTGAGGTTATCAATTTAGACA-------AAA-------------------------------------------------------TCC-CT------------A----------TATAGTTGTTTAA----AAAAAAAAATTCTA--CAAAGTT-------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--ATTTTTTTAGGGCAAAAC---TATTATTGATATAATACAAAAGTCATTTGTGCACA------AAGGA---A--GTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TGTTTA-TTT------------------------
droPer2 scaffold_5:219980-220176 - CATCGATTGAAGCTCATCACGGGGGCTGAAAAAACAATTGAGGTTATCAATTTAGACA-------AAA-------------------------------------------------------TCCCCT------------A----------TATAGTTGTTTAA----AA--AAAAATTCTA--TAAAGTT-------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--ATTCTTTTAGGGCAAAAC---GATTATTGATATAATACAAAAGTCATTTGTGCACA------AAGGA---A--GTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TGTTTA-TTTT------ATGACCGG-TTTGTTTT
droWil2 scf2_1100000004585:4915288-4915655 + GCCAAATTGAAACGAATTGCCG-CTCTGGATATACATTTGCAGTTTTAAGAGAAAGGA-------TGA--------------------TGAA----------------TCAACTTAGAAAAGAGACGATAAATACTTACCTA-----------ATAGTTGTTATA-----A------CAAATT--TTATAT-ATACAAATATCT-------------------A------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--TTGTGTGTGTGCAAGAGG---AA---------AAATACA--AACTA-TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC-------AAC----------------------------------------------------GCAAAACAAAACAAAAAAGAAGATTGAAATTGAGGGGACTGATTAGT-TT-------TGTTT---T---------------------------------------------------------TGGTACTTAAA--CCTAATGACTTCAATTTTTTATTCTCATTCTATATATG----ATATACACAAATGTTATTTTAATATGATTTTT-AAG-TATAGAAA----C-TTT----------T-TGTTGT-CTTATAGAAAACG-TCGACGTGGTATT
droVir3 scaffold_12963:10528680-10528785 + TTTTTCTTAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGACTATAGCTTTAATATTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA-TAT-TTTATGTAAAAT---------------------------GTA-ACA-AATC-G-T----A-AATCGA-------A-AG-TTG-TTTAGAAATATTT-GCGACGTGGTATG
droMoj3 scaffold_6500:19239403-19239472 + TATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--T--CTTTTTATAAAATAT-AA---GA---------AATTAGA--AGTCA-TA-TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAAATGTTT-GCGATATGGTATT
droGri2 scaffold_15252:8580052-8580482 + GCTCGATTGAAGAGTGTCACTC-AACTCGATGTACACCTGGAGTTTTAAATGTAGAATTATTACAGACTTACAGACTATTTTAGATGATGAGAGAAAACAATCGAGCATTCAGACAGTTCAGCTATCGTAATTACTTACATAATATATTGACCATAGTTGTTGAA-----G------TACATT--TTATGC-G--AAAAGCTCTATTAAATATAAACTAAATGCACTTATTTTTTACAAACAAATGTATTTTTATATCAACAAGATAATTGCGTATTGTCAGCTGTTTGAAATTGAAAGTTATTAAGTAAAATTGAAACACTGTTTATTTCTTTTAAACTTAAATTAATGACTGTAGTTTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-TTTCTCTGA-TAT-TTTATACAAAAT---------------------------GTA-AGA-AATG-CAATTGCA-AAT-------AATTCGATTAG-ATTAAAAATACTT-GCGACGCGGTATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATCGATTAAGGACCATCACGG-CGCTAAGGACGAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----AA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------TAATACA--AGTTT-TATTACAAA------AATC----T--ATTT-T---TTACTTG-----------------------------GAT-------------------------------------------------------------T--TTTTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCTAAT-TC-------TGCTC---CACATACCACCAC-----------ATAATCACACC---------------G-ATGA--TTTTTCCTAA---ACTAATGAC--TGACTT-TTATTTTCATAAT-TTTACAACAGAT---------------------------ATG-CGG-TATT-G-A----A-TAT----------T-CA-TAA-TTTAAAGAAAACG-CCGGCGTGGTATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................GAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGTATAAGACAGCGA---GA---------TAATACA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000002000000000
.................................................................................................................................................................................TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
AATCGATTAAGGACCATCACGG-CGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGTATAAGACAGCGA---GA---------TAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000100000000
..................................AAACTGAGGATTTGAACGTAAACA-------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTAT--TTTTGTATAAGACAGCGA---GA---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGACAGCGA---GA---------TAATACA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTGTATAAGACAGCGA---GA---------TAATACA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000100000
............................AGGACGAAACTGAGGATTTGAACGTAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAGACAGCGA---GA---------TAATACA--AGTTT-TAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCT..........................................................................................................................................................................................................................................1911.00101000000000000000
...............ATCACGG-CGCTAAGGACGAAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CTAT--TTTTGTATAAGACAGCGA---GA---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGACAGCGA---GA---------TAATACA--AGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATAAGACAGCGA---GA---------TAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.....................................CTGAGGATTTGAACGTAAACA-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATAAGACAGCGA---GA---------TAATACA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
droSec2
AATCGATTAAGGACCATCACGG-CGCTAAGGACGAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----AA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------TAATACA--AGTTT-TATTACAAA------AATG----T--GTTT-T---TTACTTG-----------------------------GAT-------------------------------------------------------------T--TTTTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCTAAT-TC-------TGCTC---CACATACCACCAC-----------ATAATCACACC---------------G-ATGA--TTTTTCCTAA---ACTAATGAC--TGACTT-TTATTTTCATACT-TTTATAACAGAT---------------------------ATG-CGG-TATT-G-A----A-TAT----------T-CA-TAA-TTTAAAGAAAACG-CCGGCGTGGTATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................GAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATAAGACAGCGA---GA---------TA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
........................GCTAAGGACGAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
dm3
AATCGATTAAGGACCATCACGG-CGTTGAGGACGAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----AA------CCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------TAATACA--AGTTT-TATTACAAA------AATG----T--GTTT-T---TTACTTG-----------------------------GATAC---CCAGGTGGTCC-CA------------------------------------------C--CTGTTGGAATGT------------------------------------------------------------------------------------------------------------------------------AGTTGCTAAT-TC-------GGCTC---CACATACCACCAC-----------ACAATCACACT-----------------TCAA--TTTTTCCTAC---ACTAATGAC--TGACTT-TTATTTTTATAAT-TTTACAACAGAT---------------------------ATG-CGG-TATT-GAA----A-TAT----------T-CA-TAA-TTTAAAGAAAACG-CCGGCGTGGTATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................ACGAAACTGAGGATTTGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................TGAGGACGAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGAAACTGAGGATTTGAACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACGAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGAAACTGAGGATTTGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GAGGACGAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GAGGACGAAACTGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TAT--TTTTGTATAAGACAGCGA---GA---------TAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTTGAGGACGAAACTGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACTGAGGATTTGAACGTAAACA-------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAACTGAGGATTTGAACGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GGACGAAACTGAGGATTTGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCACGG-CGTTGAGGACGAAACTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATTAAGGACCATCACGG-CGTTGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGAGGACGAAACTGAGGATTTGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................T-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGCGA---GA---------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
............................................TTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAAACG-CCGGCGTGGTATC2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACTGAGGATTTGAACGTAAACA-------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACGAAACTGAGGATTTGAACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTAT--TTTTGTATAAGACAGCGA---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTGTATAAGACAGCGA---GA---------TAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAGACAGCGA---GA---------TAATACA--AGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
.....................................CTGAGGATTTGAACGTAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
AATCGATTAAGGACCATCACGG-CGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTTGAGGACGAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GAGGACGAAACTGAGGATTTGAACGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGAGGACGAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACGAAACTGAGGATTTGAACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGAGGACGAAACTGAGGATTTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATTAAGGACCATCACGG-CGTTGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AT--TTTTGTATAAGACAGCGA---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACGAAACTGAGGATTTGAACGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGAAACTGAGGATTTGAACGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACGAAACTGAGGATTTGAACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGG-CGTTGAGGACGAAACTGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAAGGACCATCACGG-CGTTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................TGAGGACGAAACTGAGGATTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CAGCGA---GA---------TAATACA--AGTTT-TATTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGTATAAGACAGCGA---GA---------TAATACA--AGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CATCACGG-CGTTGAGGACGAAACTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGAGGACGAAACTGAGGATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTTGTATAAGACAGCGA---GA---------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................TTGAGGACGAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................GAAACTGAGGATTTGAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATCACGG-CGTTGAGGACGAAACTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGAGGATTTGAACGTAAACA-------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAGGACCATCACGG-CGTTGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TTCTAT--TTTTGTATAAGACAGCGA---GA---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................AACA-------AAT-------------------------------------------------------CA----------------T-----------TTAGTTGTTCCT----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATAAGACAGCGA---GA---------TAATACA--AGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TAT--TTTTGTATAAGACAGCGA---GA---------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATAAGACAGCGA---GA---------TAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GCGA---GA---------TAATACA--AGTTT-TATTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATAAGACAGCGA---GA---------TAATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGTATAAGACAGCGA---GA---------TAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGAGGACGAAACTGAGGATTTGAACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TATAAGACAGCGA---GA---------TAATACA--AGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........GACCATCACGG-CGTTGAGGACGAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATCGATTAAGGACCATCACGG-CGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAAGGACCATCACGG-CGTTGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GGACGAAACTGAGGATTTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATTAAGGACCATCACGG-CGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGAGGACGAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATCGATTAAGGACCATCACGG-CG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CTAT--TTTTGTATAAGACAGCGA---GA---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCACGG-CGTTGAGGACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATAAGACAGCGA---GA---------TAATACA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACGAAACTGAGGATTTGAACGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTTGAGGACGAAACTGAGGATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGTATAAGACAGCGA---GA---------TAATACA--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................TTGAGGACGAAACTGAGGATTTGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................TTGTTCCT----AA------CCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACGAAACTGAGGATTTGAACGTAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGTTGAGGACGAAACTGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................AT--TTTTGTATAAGACAGCGA---GA---------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................CGAAACTGAGGATTTGAACGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGAGGACGAAACTGAGGATTTGAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................ACGAAACTGAGGATTTGAACGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATCACGG-CGTTGAGGACGAAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GTATAAGACAGCGA---GA---------TAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................CGG-CGTTGAGGACGAAACTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTGAGGATTTGAACGTAAACA-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGGACGAAACTGAGGATTTGAACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGTATAAGACAGCGA---GA---------TAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................GAAACTGAGGATTTGAACGTAAACA-------AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGTTGAGGACGAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.ATCGATTAAGGACCATCACGG-CGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGGATTTGAACGTAAACA-------AAT-------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CA----------------T-----------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA----A-TAT----------T-CA-TAA-TTTAAAGAA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAGGACCATCACGG-CGTTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGACAGCGA---GA---------TAATACA--AGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................ACGAAACTGAGGATTTGAACGTAAACA-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGG-CGTTGAGGACGAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GG-CGTTGAGGACGAAACTGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGACAGCGA---GA---------TAATACA--AGTTT-TAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAAGACAGCGA---GA---------TAATACA--AGTTT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....GATTAAGGACCATCACGG-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AACCGATTAAGGACCATCACGG-CGCTGAGGAGCAAACTGAGGATTTGAACGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCCT----TA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--CTTTGTATAAGTCAGCGA---GA---------TAATACA--AGTTT-TCATACAAA------AAGGT---G--GTTT-----TTACTTG-----------------------------GAAA----CCAGGT-GCAC-C-----------------------------------------------ATA--------------------------------------------------------------------------------------------------------------------------------------------TGAT-TC-------TGCTT---CACATACCACCAC-----------AAAATCATACC---------------A-TTGA--TGTTTCCTAA---ACTAATGAC--TGACTT-TTATTTTCATAAT-TTTACAGCAGAT---------------------------ACG-TGG-TATT-GAA----A-TAT----------T-CG-TAG-TTTAAAGGAAACG-CCGGCGTGGTATCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........GACCATCACGG-CGCTGAGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..............................................................................................................................................................TGTTCCT----TA------TCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
droYak3
AACCGATTAAGAATCATCACGG-CGCTGAGAACCAAACTGAGGATTTGAACTTAAACA-------AAT-------------------------------------------------------AT----------------A-----------CTAGTTGTTCCT----AA------GCAATT--ATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACA---A---GA---------CAATACA--AGTTT-TAATACAAA------AAGC----T--GGTTTT---TTACATG-----------------------------GAAA----TCAGGT-CCAC------------------------------------------------TATATGATAAGT------------------------------------------------------------------------------------------------------------------------------AGTTGCAAAT-TC-------TGCTC---CACATACCACCAC-----------AAAATCATACC---------------A-CTCA--TGTTTTCTAA---ACTAATGAC--TGATTT-TTATTTTCATAAT-TTTATAGCAGAT---------------------------ACG-TGA-TATG-GAA----A-TAT----------T-CA-CAA-TTTAAAGGAAACG-GCGTCGTGGTATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TTACATG-----------------------------GAAA----TCAGGT-CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000
...........................GAGAACCAAACTGAGGATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
....................GG-CGCTGAGAACCAAACTGAGGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
....................GG-CGCTGAGAACCAAACTGAGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.................CACGG-CGCTGAGAACCAAACTGAGGATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
droEug1
CATCGATTAAAGACTATCACGG-CGGTGAAAACCAAACTGAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTA-----A------AAAAAT--ATACATA-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAGAAA---GA---------TAATACA--AGTCC-TAATGCAAT------AAAGA---TGTGTTA-T---TTATGT-----------------------------------AAGGAAA-TGGAT-TGTTAGTGAAAGGG-----------------------------------------------------TTTATAGTACATAT---------------------------------------------------------------------------------------------------------------------------------------CTTACCAGTTCTGTGAATTAGGGAAATAATTTG---------------A-CTTATTTAGTTCCTAAACAACTAATGACTTTGACAT-TTATTTTCATAAC-TTTACAATAGAT---------------------------AAA-TGAGTAAG-AGA----T-TAT----------T-TATTAA-TTTAAAGGAAACG-CCGGCGAGGTATCSizeHit CountTotal NormTotal
No Reads
droBia1
CATCGATTGAAGACCATCACGG-CGTTGAGAACCAAACTGAGGTTATGAATGTAGAAA-------AAG-------------------------------------------------------CT----------------A-----------TTAGTTGCTCTA-----A------CAAATT-------TT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACTAAGA---GA---------TAATACA--AGTCA-TAATGCAAT------AAAGA---C--GTTTTT---TT--GTG-----------------------------TATGTGTGACGA-TAGAT-TCTTCGAAAAAATGGAAG----------------------TTAAT---------------AAAACAAAT------------TTT-AATATATATA-------------------------------------------------CATTATTGAG-----------------------------------------TTCGTATATTT---CT---TACTTACCAAAACAACAAGTCCAAAAAATTAAATT---------------A-TTTT--ATTTTCCTAT---ACTAATGAC--TGACTT-TTATTTTCATAAT-TTTACAGTAGAT---------------------------AAA-CGA-TATT-AAA----AGTAT----------T-TGTTAA-TTTAAAGGAAACG-ACGACGTGGTATTSizeHit CountTotal NormTotal
No Reads
droTak1
CATCGATTAAAGACCATTACCG-CGCAGAGGACCAAACTAAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTA-----A------AAAATT--ATAAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACGAAAA---GA---------TAATACA--AGTCA-TAATGCAAT------AAAGT---C--GTTTTT---TT--ATG-----------------------------TATATGTGGCTA-TGGAT-TCTTTGTGAAAGCGAGAGTAAAAATAATAACAGTAATTTCTCATTTAA----------------------ATATTATAT--TTTTAA-------AAT----------------------------------------------------TTAAA-----------------------------------------TTTTTGTTTT---TTT---TACTTACCAGCACAATTAGTTCATAAAATCAAAGT---------------A-CTTTTCGTGTTCCTAA---ACTAATGACTTTGATTT-TTATTTTCATTAT-TTTACAGTAGAT---------------------------AAA-TGA-TAAT-GAA----A-TAT----------T-TATTAA-TTTAAAGGAAACG-CCGACGTGGTATTSizeHit CountTotal NormTotal
No Reads
droEle1
AATCGATTAAAAACCATCACGT-CGCTGAGAACCAAACTAAAGTTATAAATGTAAAAA-------AAC-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTT----AA------AAAGTTTGATTAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTTGTATAAGACAA--A---GA---------AAATAAA--AGTCA-TAATGCAAT------AAATA---A--GTTTTTTG-ACAGTTAAAAGG--AAACTACAGAAATATTTAATTAGAT-------------------------------------------------------------T--TT-AAGGAAGGGAAA------------ACATATTTT-AT-------AATTTTTAA---------------------NNNNNNNNNNNNNNNNNNNN-----------------------------------------------------------------------------------------------------------------------------------------------------C--TGAATT-TTATTTTTATAATGTTTACAGTAGAT---------------------------AAA-TGA-TAGT-AAA----A-TAT----------T-TATTAA-GTTAAAAGAATCG-CCGGCGTGGTATCSizeHit CountTotal NormTotal
No Reads
droRho1
GATCGATTAAAGATCATCACGG-CGCTAAGAACCAAACTGAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A-----------TTAGTTGTTCTT----AA------AAAATT--AAAAACT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTATAT--TTTTGTATAATACAG--A---GA---------TAAAACA--AGTTA-ACATACAAT------AAAGA---A--GTTTTTTTCTTAACGT-----------------------------CGTT----TCGTCA-TTCC-T-TT----------------------------------------GGA----------------------ATAGTACATATTTT-GA-------AATTTTTAATATTAAGCAGCATCAAAAAGT--------------------CACTATTAAA-----------------------------------------TTTGTATACTTTGAGCCAATACTTACCAACAGAGTGAATTCATAAAATCATAGT---------------A-TTTATTTGGTTCCTAT---CCTAATGACTTTGACTT-TTATTTTCATAATGTTTACAGTAGAT---------------------------AAA-TGA-TAGG-GAA----A-TAT----------T-AGTTAA-TTTAAAGGAAACG-CCGGCGTGGTATCSizeHit CountTotal NormTotal
No Reads
droFic1
AATCGATTAAAGACCATCTCCA-CACTAAAAACAAAACTAAGGTTATGAATGTAAACA-------ATT-------------------------------------------------------CA----------------A-----------TTAGTTGTTCTT----AA------AAAATT----AAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTTTAT--TTTTGTATAAGACAA-AA---GT---------TATTAAA--AAGCA-TATTGCAAA------GAGATTTAT--GTTTTC---TTACTGA-----------------------------AGTA----TCGGGA-GTAC-C-TA----------------------------------------TAA-ATA------GG------------------------------------------------------------------------------------------------------------------------------A--------TTCGAATAATTGTTTA---CACTTACCAACAC-----------AAAA----ATT---------------G-TGTA--TTTTTCCTAAA--ACTAATGACTTTGACTT-TTATTTTCACAATGCTTACATAAGAT---------------------------AAAAAGA-TAAT-CAA----A-TATTTA-------T-TATTAA-TTTAAAGGAAACG-TCGGCGTGGTATTSizeHit CountTotal NormTotal
No Reads
droKik1
AATAGATTGAAGGTTGTGGCAG-CGCTAAGGACCAAGCTGAGGTTATGAATGTAAACA-------AAT-------------------------------------------------------CT----------------A----------TTTAGTTGTTTTA----TTA-AAAGACCCTA--ATAAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------ATATATATTTTTGTATAAGACCAGAAGTTGA---------TAATACA--AGTTGATAATACAAAATCAAAAGAG----A--GTTT-T---ATATTTAGAAGATAAGGGTAAGGG------------------------------------------------G----------------------TTATT---------------TAAGGATAT------------TTT-GATTATTATGAGTTTTAA----------------------------------------------TTG----------------------------------AGTTGTAGAT-TG-G-----TATTC---CCTTTATTATAGA-----------ATAAATACATT---------------GATTTT--TCGTTCCTAA---ACTAATGACTTTGATTT-TTATTTTTATAAAGTTTACAGTACAT---------------------------AAT-TGT-TATT-GGA----A-TATTTT-------TATATTAATTTTAGAGGAAACG-CCGGCGTGGTATTSizeHit CountTotal NormTotal
No Reads
droAna3
AATCGATTGAAAATAATTGGGG-CGCTGAGAACCAAACTAAAGTTATGAACATAATCA-------AAG-------------------------------------------------------TT----------------A-----------GTAGTTGTTTTC-TGTAGAAAAGAAAAGTT--TTAAATT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTTTAT--TTTT-TATAAGACAT--T---CA---------TAATAAA--AGTGC-TTGTGAAAA------AATA----T--GTTTTC---TTTTAT--------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------CCTTCCAGTCTTT---------ATAATC--ATTGATGAAAAAGGCTTTT-CTAATTAGGTTCCTAA---ACTAATGACTTTGATTT-TTATTTTCACATGGTTTACAGTGGAT----TT---------------------AAG-TGA-TGAT-TAA---AA-AATAAAAAGTGATT-TCTTAA-ATTAGAGAAAACG-CCGGCGTGGTATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................AAAGTTATGAACATAATCA-------AAG-------------------------------------------------------TT----------------A-----------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...........AATAATTGGGG-CGCTGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................T----------------A-----------GTAGTTGTTTTC-TGTAGAAAAGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AA--AGTGC-TTGTGAAAA------AAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000
droBip1
AATCGATTGAAGATCATTGGGG-CTCTGAGAACCAAACTAAAGTTATGAATATAATCA-------AAG-------------------------------------------------------TT----------------A-----------GTAGTTGTTTTTCTGTAGAAAAGAAAAGTT--TAAAGTT-------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--TTTT-TATAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CATCGATTAAAGCTCATCACGG-GGCTGAAAAAACAATTGAGGTTATCAATTTAGACA-------AAA-------------------------------------------------------TCC-CT------------A----------TATAGTTGTTTAA----AAAAAAAAATTCTA--CAAAGTT-------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--ATTTTTTTAGGGCAAAAC---TATTATTGATATAATACAAAAGTCATTTGTGCACA------AAGGA---A--GTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TGTTTA-TTT------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................GAGGTTATCAATTTAGACA-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.............................................ATCAATTTAGACA-------AAA-------------------------------------------------------TCC-CT------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCATTTGTGCACA------AAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
droPer2
CATCGATTGAAGCTCATCACGGGGGCTGAAAAAACAATTGAGGTTATCAATTTAGACA-------AAA-------------------------------------------------------TCCCCT------------A----------TATAGTTGTTTAA----AA--AAAAATTCTA--TAAAGTT-------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------TTCTAT--ATTCTTTTAGGGCAAAAC---GATTATTGATATAATACAAAAGTCATTTGTGCACA------AAGGA---A--GTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TGTTTA-TTTT------ATGACCGG-TTTGTTTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GCCAAATTGAAACGAATTGCCG-CTCTGGATATACATTTGCAGTTTTAAGAGAAAGGA-------TGA--------------------TGAA----------------TCAACTTAGAAAAGAGACGATAAATACTTACCTA-----------ATAGTTGTTATA-----A------CAAATT--TTATAT-ATACAAATATCT-------------------A------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--TTGTGTGTGTGCAAGAGG---AA---------AAATACA--AACTA-TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC-------AAC----------------------------------------------------GCAAAACAAAACAAAAAAGAAGATTGAAATTGAGGGGACTGATTAGT-TT-------TGTTT---T---------------------------------------------------------TGGTACTTAAA--CCTAATGACTTCAATTTTTTATTCTCATTCTATATATG----ATATACACAAATGTTATTTTAATATGATTTTT-AAG-TATAGAAA----C-TTT----------T-TGTTGT-CTTATAGAAAACG-TCGACGTGGTATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................TATCT-------------------A------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--TTGTGTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.....ATTGAAACGAATTGCCG-CTCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................ATATCT-------------------A------------------------------------------------------------------------------------------------------------------------------------------------TTTTTT--TTGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
........................................................................................................................................................................................................................................................................................................................................................................................TTGTGTGTGTGCAAGAGG---AA---------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................T--TTGTGTGTGTGCAAGAGG---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....ATTGAAACGAATTGCCG-CTCTGGATATAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................T--TTGTGTGTGTGCAAGAGG---AA---------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.............GAATTGCCG-CTCTGGATATACATTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................A--AACTA-TTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC-------AAC----------------------------------------------------GCAAAA................................................................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................................................................................................................................................................................TTT--TTGTGTGTGTGCAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............................................TTTAAGAGAAAGGA-------TGA--------------------TGAA----------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
TTTTTCTTAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGACTATAGCTTTAATATTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA-TAT-TTTATGTAAAAT---------------------------GTA-ACA-AATC-G-T----A-AATCGA-------A-AG-TTG-TTTAGAAATATTT-GCGACGTGGTATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATTT-GCGACGTGGTAT.2111.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGACTATAGCTTTAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000100000000000000
droMoj3
TATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--T--CTTTTTATAAAATAT-AA---GA---------AATTAGA--AGTCA-TA-TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAGAAATGTTT-GCGATATGGTATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCTCGATTGAAGAGTGTCACTC-AACTCGATGTACACCTGGAGTTTTAAATGTAGAATTATTACAGACTTACAGACTATTTTAGATGATGAGAGAAAACAATCGAGCATTCAGACAGTTCAGCTATCGTAATTACTTACATAATATATTGACCATAGTTGTTGAA-----G------TACATT--TTATGC-G--AAAAGCTCTATTAAATATAAACTAAATGCACTTATTTTTTACAAACAAATGTATTTTTATATCAACAAGATAATTGCGTATTGTCAGCTGTTTGAAATTGAAAGTTATTAAGTAAAATTGAAACACTGTTTATTTCTTTTAAACTTAAATTAATGACTGTAGTTTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-TTTCTCTGA-TAT-TTTATACAAAAT---------------------------GTA-AGA-AATG-CAATTGCA-AAT-------AATTCGATTAG-ATTAAAAATACTT-GCGACGCGGTATGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................GAGCATTCAGACAGTTCAGCTATCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
.............................................................................ATTTTAGATGATGAGAGAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/19/2015 at 11:52 AM