ID:

dsi_19385

 Coordinate:

3r:18083942-18084091 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.6 -27.5 -27.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
PROTOPDNAP+
mature
star
  1. 2l:20690449-20690464 -
  2. 2l:23112634-23112649 -
  3. 2l:23177800-23177815 -
  4. 2r:153926-153941 -
  5. 2r:308958-308973 -
  6. 2r:794612-794627 -
  7. 2r:801223-801238 -
  8. 2r:1187371-1187386 -
  9. 2r:2058161-2058176 -
  10. 2r:4720112-4720127 -
  11. 3l:5405773-5405788 -
  12. 3l:22543593-22543608 -
  13. 3l:23750490-23750505 -
  14. 3l:24220564-24220579 -
  15. 3l:24231789-24231804 -
  16. dsi_19385  3r:18084048-18084063 -
  17. 4:438913-438928 -
  18. x:1656500-1656515 -
  19. node_59724:162-177 -
  20. node_31462:583-598 -

Sense Strand Reads

CAAGTTACTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGTATGGTGATGATGATACTAGAAGCAAAGACACTAGAATAATGCAAAACATGAATTGTTTACATGGTGTGCGAATTGATCAAAAATAATATTGATGAATTGCATATTTTGTCAAATTTAAATGCATGAACATACGTGTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTAGAGCTGTAGAGCTCTCCGC
******************************************************************************(((...((((((.....(((((.....((((((....(((.(((((((.((((.(((((........))))).))))))))))).)))..))))))..))))).....)).)))).))).**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 O002
Head
 SRR902009
testis
 SRR902008
ovaries
 M024
male body		 M025
embryo
 M053
female body
 M023
head
 GSM343915
embryo
..................................................GTATGGCATGGAGATGATGAAA.................................................................................................................................................................................. 22 3 2 3.00 6 5 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGAGCACACATACAGTTGTCGGCTGT................................ 26 1 15 2.87 43 0 40 0 1 2 0 0 0 0 0 0 0 0 0
...................................................TATGGCATGGAGATGATGAAA.................................................................................................................................................................................. 21 3 4 2.25 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTGTCAATTTTAAATCCATGAA.................................................................. 23 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGT....................................... 17 0 20 1.85 37 0 0 37 0 0 0 0 0 0 0 0 0 0 0
..................................................GTATGGCATGGAGATGATGA.................................................................................................................................................................................... 20 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTATGGCATGGAGATGATGAA................................................................................................................................................................................... 21 3 8 1.50 12 11 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGT................................ 24 0 5 1.20 6 1 3 0 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AGTGATCAAAAATAATAGCGATGA.................................................................................................. 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TGAACATACGTGTGTGCA.................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TATGTGCACACATACAGTTGTCGGC................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGTGTGTGCACACATACAGTTG........................................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................GGTATGGCATGGTGATGATG..................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTGTCACTGTATGCGTAGA................. 19 0 16 0.88 14 0 0 0 0 0 14 0 0 0 0 0 0 0 0
.................................................GGTATGGCATGATGATGATG..................................................................................................................................................................................... 20 2 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................GTATGGCATGGAGATGATG..................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................GGAACAGATCGCTCAGGTAGG................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGC................................... 21 0 7 0.43 3 0 0 1 0 0 0 0 0 0 1 1 0 0 0
.........................................................................................................................TGTGCTAGTTGATCTAAAATA............................................................................................................ 21 3 7 0.43 3 0 2 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCA.............................. 26 0 5 0.40 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCACT............................ 28 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGTCAC............................. 29 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGT................................ 26 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGCAAAACATGAATTTTTTACATGGTG............................................................................................................................... 27 1 5 0.40 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCACTG........................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACATATACAGTTGTCGGCTGT................................ 26 1 7 0.29 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TATGGCATGGAGATGATGAA................................................................................................................................................................................... 20 3 15 0.27 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGGCTGTCACTGTATGCGTAGA................. 22 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGTC............................... 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCAC............................. 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGTCA.............................. 28 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................CGTATGGCATGGAGATGATG..................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACATACACAGTTGTCGGCTGTCAC............................. 29 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACATACACAGTTGTCGGCTGTCACTG........................... 29 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGATGT................................ 24 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................GCAAAGACACTAGAAT............................................................................................................................................................ 16 0 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGACACTT........................... 29 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GTGTGCACACATACAGTTGTCGGC................................... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACATACACAGTTGTCGGCTGT................................ 26 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCT.................................. 24 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTGCACACATACAGTTGTCGGC................................... 22 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTGCACATATACAGTTGTCGGCTG................................. 25 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGCACACATACAGTTGTCGGCT.................................. 22 0 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TACAGTTGTCGGCTGTCACTGTA......................... 23 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TACAGTTGTCGGCTGTCACTGTATGC...................... 26 0 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................GTGTGCACATACACAGTTGTCG..................................... 22 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ACACATACAGTTGTCGGCTGT................................ 21 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................GCACACATACAGTTGTCGG.................................... 19 0 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGAGCACACATACAGTTGTCGGCTG................................. 25 1 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GTGTGCACACATACAGTTGTCGGT................................... 24 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TACAGTTGTCGGCTGTCACT............................ 20 0 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACATACAGTTGTCGGCTGTCACT............................ 23 0 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CAAGGTGTGCGCATTGCTC................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................TATACAGTTGTCGGCTGTCACTG........................... 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TCGGCTGTCTCTGTA......................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GCATACATACAGTTGTC...................................... 17 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AACATATAGTTGTGGGCTGTC............................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................ATACATACAATTGTCGGCTGTCAC............................. 24 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................ATGGCATGGAGATGATGAAA.................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGTTGTCGGCTGTCACA............................ 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTCAATGAGCGTACGGGTGCGGAAGTTGACCCGCGTAGTCTAGCGAGTCCATACCATACCACTACTACTATGATCTTCGTTTCTGTGATCTTATTACGTTTTGTACTTAACAAATGTACCACACGCTTAACTAGTTTTTATTATAACTACTTAACGTATAAAACAGTTTAAATTTACGTACTTGTATGCACACACGTGTGTATGTCAACAGCCGACAGTGACATACGCATCTCGACATCTCGAGAGGCG
****************************************************(((...((((((.....(((((.....((((((....(((.(((((((.((((.(((((........))))).))))))))))).)))..))))))..))))).....)).)))).))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 GSM343915
embryo
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
.................................................CCATACCATACCACTACTACTATGAT............................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................AACGTATAAAACAGTTT................................................................................ 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACATACGCATCTCT............... 25 1 5 0.60 3 2 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................CAGCCGACAGTGACATA........................ 17 0 15 0.53 8 8 0 0 0 0 0 0 0 0 0 0
...................................................ATACCGTACCTCTACTACTTT.................................................................................................................................................................................. 21 3 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGTGTGTACACACGTGTGTATGTCAAC........................................ 27 3 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGACAGTGACATACGCTT................... 18 1 20 0.30 6 0 0 0 0 6 0 0 0 0 0 0
.......................................................................................................................................................................................................................ACAGTGACATACGCTTCT................. 18 1 20 0.30 6 0 0 0 0 6 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACATA........................ 16 0 16 0.25 4 4 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACATACGCA.................... 20 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACGTGTGTATGTCAACAGCCGACAGT.............................. 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCAACAGCCGACAGTGACAT......................... 20 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGTGTATGTCAACAGCCGACAGTGA............................ 25 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACACGTGTGTATGTCAACAGCCGA.................................. 24 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0
..........AGTTCGGGTGCGGAAGTT.............................................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................TCAACAGCCGACAGTGACGTACGCCTCT................. 28 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CGTGTGTATGTCAACAGCCTAG................................. 22 2 17 0.12 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAGCCGACAGTGACAT......................... 16 0 17 0.12 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAGCCGACAGTGACATACGCATC.................. 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACATACGCATC.................. 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTGTATGTCAACAGCCG................................... 17 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2
...................................................................................................................................................................................................................GCCGACAGTGACATACGCATCT................. 22 0 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................CAGCCGACAGTGACATACGCATCT................. 24 0 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACATACGCATCTTG............... 25 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................CAGCCGACAGTGACATACG...................... 19 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACATACG...................... 18 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGTGTATGTCAACAGCCGACGGTGA............................ 25 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTCAGCAGGCGACAGTGACAT......................... 21 2 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................GCCGACAGTGACATA........................ 15 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCCGACAGTGACAT......................... 15 0 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................TCGTTTCTGTGATCTT............................................................................................................................................................. 16 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCCGACAGTGACATACGAAT................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATGTCAGCAGGCGGCAGTGAC........................... 21 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................TATGTCAGCAGGCGACAGTGA............................ 21 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................GCAGGCGACAGTGACATACGCT.................... 22 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................CAGCCGACAGTGACA.......................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACACTTGTGTATGTCAGCAG...................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................CACACTTGTGTATGTCAGCAG...................................... 21 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................TTCGTTTCTGCGATCTTA............................................................................................................................................................ 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CAGTGCCATACGCATGAC................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:18083892-18084141 - dsi_19385 CAAGTTACTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGT---------------ATG-----------GT-GATG---ATGA------------TACTAGAAGCAAAGACACTAGAATAATGCAAAACATGAATTGTTTACATGGTGTGCGAATTGATCAAAAATAATA-------------------TTG----ATGAATTGCATATTTTGTCA-------------AATTTA-AATG----------CATGAACATACGTGTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTA-----GA-------GCTGTAGAGCTCTCCG--------C
droSec2 scaffold_0:18915420-18915644 - dse_567 CAAGTTACTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGTATGGTGTGGCATGATATG-----------GT-GATG---ATGA------------TACTAGAAGCA--GACACTAGAACAATGCAA-----------------TGGT--GCCAATTGATCGAAAATAACATC-------------------------------------------A-------------AATTTACAATG----------CATGAGCATACGTGTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTA-----GA-------GCTGCAGAGCTCTCCG--------C
dm3 chr3R:18558907-18559179 - CAAGTTATTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGTATGA-------------------------AT-GGTA---TCATCACCATAGTAGATAGTAGAAGCAAAGACACTAGAATAATGCAAAACAAGAAATTCTTACATGGT--GCCAATTGATCCAAAATAATA-------------------TAGATAT-------------TTTGACA-------------AATTTACAATGCATGAGCATACATGAACATACGTG--TGCACACATGCAGTGGTCGGCTGTCACTGTATGCGTAGAAAAGAGCTGTTCGCTGTAGAGCTCTCCG--------C
droEre2 scaffold_4644:872934-873135 - GGTGAGG-----------------------------------------------------------------------------------------GTGA------------GTGTGTTTGCAAAGACT-AAGAATAATGTGGGGCA---ATTATGTACATA-----------GATTGAAAGT--CCATAAGCTTCTGAATTGAAGGTCATAT-------------TTTGTCA-------------AATTTACAATA----------TATGAGCATACGTG--TGCACACATGCAGTGATCGGCTGTCGCTGTATGCGTACAAGAGAGCTGCTGGCTCTAGAGCGCTC-TCTCTCTCTC
droYak3 v2_chr2h_random_003:147984-148150 - TAAGGCAATG----------------------------------------------------------------------------------------------------------------------------------CAAAACTAGAGTT-TTAAAATGAT--AGCAATTCATAAAAAATAATA-------------------TAG----AT---TTGAATATTTTGTTA-------------TTTCTACAATG----------CATGTGCATACGTG--TGCACCAATACACTGGTCATCTGTAGCTGTTTGCCTACAAGAGAGCTGCTGCCTCTAGAGCTCTTCG--------C
droEug1 scf7180000409768:703315-703368 - CAAGTTATACCTTAGCTCATGCGTTCAACTGGGCCTTCCAGATTGCTCAGGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301187:25241-25328 + TTTT-CGCATATTAATGCATGAGAATAAGTGTGCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATTGGTTTTTTGTCGCTGTGTGTGTA-----GAGCGACTGGCCCTAGAATGCTC-----------
droTak1 scf7180000410749:29282-29367 + AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------CTTGTGAGTACATG--TGCACACATACAGTCGTCGGCTGTCGCTGTATGCGTACAACAGAGCGGATGGCTCTAGAACGCC-CT--------C
droEle1 scf7180000491017:253861-253971 - CAAGTTATTCGCTTGCCCACGCCCTCAACTGGAGCCTCCAGATCGCTCAGGTGTTAT---------------G-------------GCTGATA---AGCG------------GAGTTATG------GAGC-CGAATAATGCTGA-----TATGGTTTACAGGGGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000764548:777-985 - CTTAGAT---------------------------------------------ATATA---------------ATA-----------AT-AATT---AG--------------TAAATAAAGTA--AATATAAAGGCAATTCAATATAAGTATTAT------------------------TAATAATGTTAGAATTTTAAAATAAAGAGTGTAT-------------TTTGACAGCGCGCTGCAGCGAA-TTTCTTCG----------CTTGTGAATACATG--TGCACACATACATTCTTCGGCTGTCGCAGTATGCGCGCAAAAGAGCGGCTGGCTTTAGAGCGCTC-T--------C
droFic1 scf7180000454055:260443-260518 + CAACTTATTCGCTAGCCCACGCCTTGAATTGGGCCCTCCAGATTGCTCAGGTATGAC---------------A-------------GC-GATA---AGTA------------AACTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302697:1117466-1117523 - CGAATTACACCCTGGCCCACGCCTTTAACTGGGCCCACCAAATCGCCAAGGTAAGAC---------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:12756514-12756566 + CCGGTTACACCTTGTCCCACTCCCTCAACTGGGCTCTGCAGATGGCTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396691:1642659-1642754 + CCAGTTACACCTTGTCTCATTCCCTCAACTGGGCTCTGCAAATGGCTCAAGTATTAG---------------AAT-----------AC-TATA---GTAG------------TACTATAGT----------------------------------------------------------AGGTACCATT-------------------------------------------A-------------AGATA------------------------------------------------------------------A-----------------------------------------
dp5 2:6275397-6275478 + CAAGCTATACGTTGGCTCATGCCATCAACTGGGGACTCCAGATCGCAAAGGTGTGT-----------------GTACATATCGACAGAT---AATAAAA----------------------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------
droPer2 scaffold_0:99598-99679 + CAAGCTATACGTTGGCTCATGCCATCAACTGGGGACTCCAGATCGCAAAGGTGTGT-----------------GTACATATCGACAGAT---AATAAAA----------------------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------
droWil2 scf2_1100000004515:2907186-2907238 + CGGCCTACTCCTTGGCCCACGCCATGAGCTGGGCCCGTCAGTGCGCTTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:8138674-8138726 + CAAATTATATATACACGCTGGCACTCAAATGGATGCATCAATTGGCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:4087034-4087086 + CTGCCTATAGTCTGGCCCATGCCATGAGCTGGGCACGCCAGTGTGCAGAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15081:644335-644386 - CCGCGTATAGCTTGGCGCATGCCATGAGCTGGGCGCTCCAGTGTGCCGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAAGTTACTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGT---------------ATG-----------GT-GATG---ATGA------------TACTAGAAGCAAAGACACTAGAATAATGCAAAACATGAATTGTTTACATGGTGTGCGAATTGATCAAAAATAATA-------------------TTG----ATGAATTGCATATTTTGTCA-------------AATTTA-AATG----------CATGAACATACGTGTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTA-----GA-------GCTGTAGAGCTCTCCG--------CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGT...........................................................17201.8537000000000037000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGT....................................................2451.20600000013110000000
.............................................................................................................................................................................................................................................................................TGAACATACGTGTGTGCA........................................................................1811.00100000100000000000
.....................................................................................................................................................................................................................................................................................CGTGTGTGCACACATACAGTTG............................................................2211.00100001000000000000
...............................................................................................................................................................................................................................................................................................................CTGTCACTGTATGCGTA-----GA-------.........................19160.8814000014000000000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGC.......................................................2170.43301100000001000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCA..................................................2650.40200000011000000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCACT................................................2850.40200000020000000000
.........................................................................................................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGTCAC.................................................2950.40200000002000000000
.........................................................................................................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGT....................................................2650.40200000002000000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCACTG...............................................2930.33100000001000000000
............................................................................................................................................................................................................................................................................................................CGGCTGTCACTGTATGCGTA-----GA-------.........................22100.20200000000200000000
.........................................................................................................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGTC...................................................2750.20100000010000000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGTCAC.................................................2750.20100000001000000000
.........................................................................................................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCTGTCA..................................................2850.20100000000010000000
........................................................................................................................GCAAAGACACTAGAAT...............................................................................................................................................................................................................................16200.15300000000003000000
........................................................................................................................................................................................................................................................................................GTGTGCACACATACAGTTGTCGGC.......................................................2470.14100000000100000000
.........................................................................................................................................................................................................................................................................................TGTGCACACATACAGTTGTCGGCT......................................................2470.14100000010000000000
..........................................................................................................................................................................................................................................................................................GTGCACACATACAGTTGTCGGC.......................................................2270.14100000000001000000
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCT......................................................2270.14100000000000010000
...................................................................................................................................................................................................................................................................................................TACAGTTGTCGGCTGTCACTGTA.............................................2390.11100000000001000000
...................................................................................................................................................................................................................................................................................................TACAGTTGTCGGCTGTCACTGTATGC..........................................2690.11100000000000010000
..............................................................................................................................................................................................................................................................................................ACACATACAGTTGTCGGCTGT....................................................21140.07100010000000000000
............................................................................................................................................................................................................................................................................................GCACACATACAGTTGTCGG........................................................19140.07100000001000000000
........................................................................................................................................................................................................................................................................................GTGTGCACACATACAGTTGTCGGT.......................................................24160.06100000001000000000
...................................................................................................................................................................................................................................................................................................TACAGTTGTCGGCTGTCACT................................................20170.06100000010000000000
................................................................................................................................................................................................................................................................................................ACATACAGTTGTCGGCTGTCACT................................................23170.06100000001000000000
droSec2
CAAGTTACTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGTATGGTGTGGCATGATATG-----------GT-GATG---ATGA------------TACTAGAAGCA--GACACTAGAACAATGCAA-----------------TGGT--GCCAATTGATCGAAAATAACATC-------------------------------------------A-------------AATTTACAATG----------CATGAGCATACGTGTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTA-----GA-------GCTGCAGAGCTCTCCG--------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................TGCACACATACAGTTGTCGGCTGT....................................................2480.1310010
..............................................................................................................................................................................................................................................................................................ACACATACAGTTGTCGGCTGTCACTGT..............................................27180.1122000
...................................................................................................................................................................................................................................................................................................TACAGTTGTCGGCTGTCACTGTATGC..........................................26150.0711000
.......................................................................................................................................................................................................................................................................................................GTTGTCGGCTGTCACTGTATG...........................................21170.0611000
..............................................................................................................................................................................................................................................................................................ACACATACAGTTGTCGGCTGTCACT................................................25190.0511000
........................................................................................................................................................................................................................................A-------------AATTTACAATG----------CATGAGCA....................................................................................20200.0510100
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTA-----GT-------.........................18200.0510001
..............................................................................................................................................................................................................................................................................................ACACATACAGTTGTCGGCTGT....................................................21200.0510010
dm3
CAAGTTATTCGCATGCCCACGCCTTCAACTGGGCGCATCAGATCGCTCAGGTATGGTATGA-------------------------AT-GGTA---TCATCACCATAGTAGATAGTAGAAGCAAAGACACTAGAATAATGCAAAACAAGAAATTCTTACATGGT--GCCAATTGATCCAAAATAATA-------------------TAGATAT-------------TTTGACA-------------AATTTACAATGCATGAGCATACATGAACATACGTG--TGCACACATGCAGTGGTCGGCTGTCACTGTATGCGTAGAAAAGAGCTGTTCGCTGTAGAGCTCTCCG--------CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................TAGAAAAGAGCTGTTCGCTGTAGAGC...............26353.00159000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010010100010000001000000000000000000000000000000000000000000000000000192317195100000000000000110013170000000001000000000000000000000000000000000000000000000000000000000011000000113000000000000001001000000
....................................................................................................................................................................................................................T-------------TTTGACA-------------AATTTACAATGCATGAGCA..............................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000010010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTAGAAAAGAGC..............................2585.75460000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102001100000000000000000000000000000000000000000000200000000000010000000210000235220000000000100000000000000000000000000000000000000000000000006000001310000000301000000000000000210000000
..................................................................................................................................................................................................................................................................................................................................AAAGAGCTGTTCGCTGTAGAGC...............2243.50140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014600000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGAGCTGTTCGCTGTAGAGCT..............2143.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000020000000000000000000000000000000000000000000000000000000000000110000000000000000000000000010002000000000010010001000
..................................................................................................................................................................................................................................TTTGACA-------------AATTTACAATGCATGAGCA..............................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAAGAGCTGTTCGCTGTAGAGCT..............2342.75110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000020000000
....................................................................................................................................................................................................................T-------------TTTGACA-------------AATTTACAATGCATGAG................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGACA-------------AATTTACAATGCATGAGCA..............................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCGGCTGTCACTGTATGCGTAGA.....................................23111.64180000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000001320000010000000000000000000000000000000000000000000000000000000000000000000000000000411000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTAGAAAAGAGCTG............................2771.57110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000001020000000000000010010000000000000000000000000000000000000000000000001000000000000000000000000000101000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAAAGAGCTGTTCGCTGTAGAGCTC.............2631.3340000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AAAAGAGCTGTTCGCTGTAGAGC...............2341.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AAGAGCTGTTCGCTGTAGAGC...............2141.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000010000
...........................................................................................TA---TCATCACCATAGTAGCG......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................T-------------TTTGACA-------------AATTTACAATGCATGA.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTGACA-------------AATTTACAATGCATGAGCATAC...........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTGACA-------------AATTTACAATGCATGAGC...............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................T--GCCAATTGATCCAAAATAATA-------------------TAGA.....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AAAAGAGCTGTTCGCTGTAGA.................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010100000000000000000000010000000000000000000000000000
............................................................................................................................................................................TGATCCAAAATAATA-------------------TAGATAT-------------TT...................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TTGATCCAAAATAATA-------------------TAGATAT-------------TT...................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGAGCATACATGAACATACGTG--T...........................................................................2311.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTTGACA-------------AATTTACAATGCATGAGC...............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AAGAGCTGTTCGCTGTAGAGCTCTCCG--------C2821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TG--TGCACACATGCAGTGGTCG.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAAAGAGCTGTTCGCTGTAGAGCTCT............2731.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................T-------------TTTGACA-------------AATTTACAATGCATGAGC...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTGACA-------------AATTTACAATGCATGAGCA..............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................T-------------TTTGACA-------------AATTTACAATGCAT...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................................................................................................................................................................................................ATAT-------------TTTGACA-------------AATTTACAATGCATGA.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................T-------------TTTGACA-------------AATTTACAATGCATG..................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTGACA-------------AATTTACAATGCATGAGCATA............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGCATCAGATCGCTCAGGTATGGTA.............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CACATGCAGTGGTCGGCTGTC...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAGCTGTTCGCTGTAGAGC...............1951.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCGGCTGTCACTGTATGCGTAGAA....................................24110.8290000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000021000100000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAAGAGCTGTTCGCTGTAGAG................2140.7530000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTAGAAAAGAGCT.............................2670.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAGAAAAGAGCTGTTCGCTGTAGA.................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAGAAAAGAGCTGTTCGCTGTAGAGCTC.............2830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAGAAAAGAGCTGTTCGCTGTAGAGCT..............2730.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TATGCGTAGAAAAGAGCTGTTCGC.......................24200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTAGAAAAGAG...............................24100.6060000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000100000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCTGTTCGCTGTAGAGCTCT............2050.6030000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCGGCTGTCACTGTATGCGTAGAAAA..................................2690.5650000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................CACTGTATGCGTAGAAAAGAGCTGT...........................25200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ATGAACATACGTG--TGCACACAT...................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CATGAACATACGTG--TGCACAC.....................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AAGAGCTGTTCGCTGTAGAGCT..............2240.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................................................................................................AGTGGTCGGCTGTCACTG...............................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAAGAGCTGTTCGCTGTAGAGCTC.............2440.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGTATGCGTAGAAAAGAGCTGTTCGC.......................26200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCGGCTGTCACTGTATGCGTAGAAA...................................2590.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAGCTGTTCGCTGTAGAGCT..............2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AGCTGTTCGCTGTAGAGCTCT............2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CGGCTGTCACTGTATGCGTAG......................................21110.3640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000001000
..........................................................................................................................................................................................................................................................................................................................TGCGTAGAAAAGAGCTGTTCGCTG.....................24200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000002000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................TGTTCGCTGTAGAGCTCTCCG--------.2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTAGAAAAGA................................23120.3340000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAGAAAAGAGCTGTTCGCTGTAGAG................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAAAGAGCTGTTCGCTGTAGAGCT..............2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGCGTAGAAAAGAGCTGTTCGCTGTAGA.................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTCGCTGTAGAGCTCTCCG--------C2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTAGAAAAGAGCTGTTCGCTGTAGAGC...............2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AGAAAAGAGCTGTTCGCTGTAGA.................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCTGTTCGCTGTAGAGCTCTCCG--------C2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATACGTG--TGCACACATGCAGT..............................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................ATGCGTAGAAAAGAGCTGTTCGCTGTAGAG................3030.3310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAGCTGTTCGCTGTAGAGCTCTCCG--------C2630.3310000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GAAAAGAGCTGTTCGCTGTAGAG................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GGCTGTCACTGTATGCGTAGAAAA..................................24100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCGTAGAAAAGAGCTGTTC.........................19200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CTGTCACTGTATGCGTAGAAAAGAGC..............................2670.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCTGTCACTGTATGCGTAGAAAAGAGC..............................2770.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCGGCTGTCACTGTATGCGTAG......................................22110.2730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCGGCTGTCACTGTATGCGTAGAAAAGA................................2880.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGAGCTGTTCGCTGTAGAGCTCT............2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGAGCTGTTCGCTGTAGAGC...............2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TATGCGTAGAAAAGAGCTGTTCGCT......................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TATGCGTAGAAAAGAGCTGTTCGCTGT....................27200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AAGAGCTGTTCGCTGTAGAGCTCT............2440.2510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AAAGAGCTGTTCGCTGTAGAGCTCT............2540.2510000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AAAAGAGCTGTTCGCTGTAGAGCTC.............2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AAAAGAGCTGTTCGCTGTAGAGCT..............2440.2510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GGCTGTCACTGTATGCGTAGAAAAGA................................2690.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAGAAAAGAGCTGTTCGCTGTAGAC................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGCGTAGAAAAGAGCTGTTCGCT......................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAGCTGTTCGCTGTAGAG................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AGCTGTTCGCTGTAGAGCT..............1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGTCACTGTATGCGTAGAAAAGAGCATC...........................28200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCTGTCACTGTATGCGTAGAAAAG.................................24110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCTGTCACTGTATGCGTAGAAT...................................22170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTCGCTGTAGAGCTCTCCG--------C2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TACAATGCATGAGCATACATG........................................................................................21130.1520000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTACAATGCATGAGCATACATG........................................................................................23130.1520000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................GAAAAGAGCTGTTCGCTGTAG..................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGCGTAGAAAAGAGCTGTTCGCTGT....................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGCGTAGAAAAGAGCTGTTCGC.......................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTACAATGCATGAGCA..............................................................................................17200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CACTGTATGCGTAGAAAAGAGC..............................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AAGCAAAGACACTAGAATAAT............................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
droEre2
GGTGAGG-----------------------------------------------------------------------------------------GTGA------------GTGTGTTTGCAAAGACT-AAGAATAATGTGGGGCA---ATTATGTACATA-----------GATTGAAAGT--CCATAAGCTTCTGAATTGAAGGTCATAT-------------TTTGTCA-------------AATTTACAATA----------TATGAGCATACGTG--TGCACACATGCAGTGATCGGCTGTCGCTGTATGCGTACAAGAGAGCTGCTGGCTCTAGAGCGCTC-TCTCTCTCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................GTACAAGAGAGCTGCTGGCT......................20200.1020001010
........................................................................................................................................................................................................................................................................................................................TATGCGTACAAGAGAGCTGCTGG........................23200.0511000000
......................................................................................................................................................................................................................................................................................................................TGTATGCGTACAAGAGAGCTGCTGG........................25200.0511000000
..........................................................................................................................................................................................................................................................TACAATA----------TATGAGCATACGTG--TGCA........................................................................25200.0511000000
....................................................................................................................................................................................................................................TGTCA-------------AATTTACAATA----------TATGAGCA....................................................................................24200.0511000000
.......................................................................................................................................................................................................................................CA-------------AATTTACAATA----------TATGAGCATACGTG--............................................................................27200.0511000000
....................................................................................................................................................................................................................T-------------TTTGTCA-------------AATTTACAATA----------TAA.........................................................................................22200.0511000000
droYak3
TAAGGCAATG----------------------------------------------------------------------------------------------------------------------------------CAAAACTAGAGTT-TTAAAATGAT--AGCAATTCATAAAAAATAATA-------------------TAG----AT---TTGAATATTTTGTTA-------------TTTCTACAATG----------CATGTGCATACGTG--TGCACCAATACACTGGTCATCTGTAGCTGTTTGCCTACAAGAGAGCTGCTGCCTCTAGAGCTCTTCG--------CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................TGCCTACAAGAGAGCTGCTGCCTC.....................2411.00101000000000
droEug1
CAAGTTATACCTTAGCTCATGCGTTCAACTGGGCCTTCCAGATTGCTCAGGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTTT-CGCATATTAATGCATGAGAATAAGTGTGCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATTGGTTTTTTGTCGCTGTGTGTGTA-----GAGCGACTGGCCCTAGAATGCTC-----------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------CTTGTGAGTACATG--TGCACACATACAGTCGTCGGCTGTCGCTGTATGCGTACAACAGAGCGGATGGCTCTAGAACGCC-CT--------CSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGTTATTCGCTTGCCCACGCCCTCAACTGGAGCCTCCAGATCGCTCAGGTGTTAT---------------G-------------GCTGATA---AGCG------------GAGTTATG------GAGC-CGAATAATGCTGA-----TATGGTTTACAGGGGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTTAGAT---------------------------------------------ATATA---------------ATA-----------AT-AATT---AG--------------TAAATAAAGTA--AATATAAAGGCAATTCAATATAAGTATTAT------------------------TAATAATGTTAGAATTTTAAAATAAAGAGTGTAT-------------TTTGACAGCGCGCTGCAGCGAA-TTTCTTCG----------CTTGTGAATACATG--TGCACACATACATTCTTCGGCTGTCGCAGTATGCGCGCAAAAGAGCGGCTGGCTTTAGAGCGCTC-T--------CSizeHit CountTotal NormTotal
No Reads
droFic1
CAACTTATTCGCTAGCCCACGCCTTGAATTGGGCCCTCCAGATTGCTCAGGTATGAC---------------A-------------GC-GATA---AGTA------------AACTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGAATTACACCCTGGCCCACGCCTTTAACTGGGCCCACCAAATCGCCAAGGTAAGAC---------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CCGGTTACACCTTGTCCCACTCCCTCAACTGGGCTCTGCAGATGGCTCAAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............TGTCCCACTCCCTCAACTGGG......................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
CCAGTTACACCTTGTCTCATTCCCTCAACTGGGCTCTGCAAATGGCTCAAGTATTAG---------------AAT-----------AC-TATA---GTAG------------TACTATAGT----------------------------------------------------------AGGTACCATT-------------------------------------------A-------------AGATA------------------------------------------------------------------A-----------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CAAGCTATACGTTGGCTCATGCCATCAACTGGGGACTCCAGATCGCAAAGGTGTGT-----------------GTACATATCGACAGAT---AATAAAA----------------------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................GGGACTCCAGATCGCAAAG.....................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CAAGCTATACGTTGGCTCATGCCATCAACTGGGGACTCCAGATCGCAAAGGTGTGT-----------------GTACATATCGACAGAT---AATAAAA----------------------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CGGCCTACTCCTTGGCCCACGCCATGAGCTGGGCCCGTCAGTGCGCTTTGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CAAATTATATATACACGCTGGCACTCAAATGGATGCATCAATTGGCCAAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............CACGCTGGCACTCAAATGGATG....................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................AATGGATGCATCAATTGGCCAAGGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2611.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
CTGCCTATAGTCTGGCCCATGCCATGAGCTGGGCACGCCAGTGTGCAGAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................GAGCTGGGCACGCCAGTGTGCAGA......................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
CCGCGTATAGCTTGGCGCATGCCATGAGCTGGGCGCTCCAGTGTGCCGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:10 PM