ID:dsi_19370 |
Coordinate:3r:10187627-10187688 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10187012_10187626_+]; CDS [3r_10187012_10187626_+]; CDS [3r_10187689_10188031_+]; exon [3r_10187689_10188031_+]; intron [3r_10187627_10187688_+]
No Repeatable elements found
| ##################################################--------------------------------------------------------------################################################## TGCCCGGTGTGCAATTGTTGGATCTTAATCCCGAGTCCCAGCAGCCCATTGTAACTAAATTGCAATGCAATTTAATATGTAAAGTCGCTGATCTCCTATGCTTGTCTTCTAGGAAATCTACAAATCCCTGACTGTTACCTATCTGTATGAGATTCAAGTTGA **************************************************.....((((((((...))))))))......................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
SRR553488 RT_0-2 hours eggs |
SRR902009 testis |
SRR902008 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................TCCCTGACTGTTACCTATCTGTACGAGA.......... | 28 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................CCCTGACTGTTACCTATCTGTATGAGAT......... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................CTACAAATCCCTGACTGTTACC....................... | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................................TCCCTGACTGTTACCTATCTGT................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................AAGACAACAAATCCCTGACTG............................ | 21 | 3 | 4 | 0.75 | 3 | 0 | 1 | 0 | 1 | 1 | 0 |
| ...................................................................................................................................TTGTTATCTATCTGTATGA............ | 19 | 2 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| ..............................................................................................................AGGAAGACAACAAATCCCTGA............................... | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................................AGACAACAAATCCCTGACTG............................ | 20 | 3 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................................................................ACAAATCCCTGACTGAAACA....................... | 20 | 3 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
|
ACGGGCCACACGTTAACAACCTAGAATTAGGGCTCAGGGTCGTCGGGTAACATTGATTTAACGTTACGTTAAATTATACATTTCAGCGACTAGAGGATACGAACAGAAGATCCTTTAGATGTTTAGGGACTGACAATGGATAGACATACTCTAAGTTCAACT
**************************************************.....((((((((...))))))))......................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................GATGTTGAGGGACGGACAATG........................ | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................TCTGTTGTTTAGGGACTGAC............................ | 20 | 3 | 6 | 0.33 | 2 | 0 | 2 | 0 | 0 | 0 |
| .......................................................................................................................TGTTTAGGGACTGACTTTGT....................... | 20 | 3 | 11 | 0.27 | 3 | 0 | 0 | 3 | 0 | 0 |
| .....................................................................................................................GTTGTTTAGGGACTGACTTTG........................ | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................................................................ATGTTGAGGAACGGACAATG........................ | 20 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:36 AM