ID:

dsi_19364

 Coordinate:

2r:7430859-7431008 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.7 -9.7 -9.4

Flybase annnotation

exon [2r_7428251_7431476_-]; CDS [2r_7428251_7431476_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
CGCTTCAGCCAAAGAATCCACACAGAAAACCGAAGATTTAGCTGATTCAGGTGAAATATTAAAGTCAAAGGAAGAAGATGAAGTCGCAGCCCATACTGCGGATAACATTGAAAAAGACGGTAAAAATAGATCAACAGAAGATGTGTTTATGTATGCTTTAGACTGTATTTCGAGTGCCGACGAGTTTGATGTCTTTTCCTCTCAGGACTCCAAGAAGGTAAAGCCAAGCAAAAAACTAAACACGGAAGAT
***************************************************************************************************........((((((...(((((....(((.((.((((.......)))).)).))).......))))).)))))).**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M053
female body
 M023
head
 O002
Head
 SRR618934
dsim w501 ovaries
...................................................................................................................................................TATGTATGCTTTAGACTGTATTTCGAG............................................................................ 27 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0 0
............................................................................................................................................................TTTAGACTGTATTTCGAGTGCC........................................................................ 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................GGATAACATTGAAAAAGACG................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................TGTATTTCGAGTGCCGACGAGTTTGA............................................................. 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TAGACTGTATTTCGAGTGCCGACGAGT................................................................. 27 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................TAGACTGTATTTCGAGTGCCGACGAGTT................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTATGTATGCTTTAGACTGTATTTCGAG............................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................TAGACTGTATTTCGAGTGCC........................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................TTGAAAAAGACGGTAAAAATACATCA..................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................TACTGCGGATAACATTGAAAAAGAC.................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGCTTTAGACTGTATTTCGAGTGCCGA...................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTTTATGTATGCTTTAGACTGTAT.................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AAAACTAAACACGGAAGAT 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......TCCAAAGAATCCACACAGAAAACCGAAGA...................................................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTAGACTGTATTTCGAGTGCCGACGAGT................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATACTGCGGATAACATTGAAAAAGA..................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................TTTAGACTGTATTTCGAGTGCCGACGAGTT................................................................ 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........AAAGAATCCACACAGAAA.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..............................................TCAGGTGAAATATTAAAGTCAAAGGA.................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AGACTGTATTTCGAGTGCCGACGAG.................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TTCCTCTCAGGACTCCAAGAAGGTAT............................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................AAATAGATCAACAGAAGATGTGT........................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................ATTAAAGTCAAAGGAAGA............................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................TCAGGACTCCAAGAAGGTAAA............................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................ACCGAAGATTTAGCTGATTCAGATGAA................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................TATTAAAGTCAAAGGAAGAAGA............................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................ATGTCGCAGTCCATACTG........................................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
...................................................TGAAATATTAAAGTCAG...................................................................................................................................................................................... 17 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1
.........................................CTGATTCAGGCGAAA.................................................................................................................................................................................................. 15 1 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CTAGTGCTCTCAGGACTC........................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCGAAGTCGGTTTCTTAGGTGTGTCTTTTGGCTTCTAAATCGACTAAGTCCACTTTATAATTTCAGTTTCCTTCTTCTACTTCAGCGTCGGGTATGACGCCTATTGTAACTTTTTCTGCCATTTTTATCTAGTTGTCTTCTACACAAATACATACGAAATCTGACATAAAGCTCACGGCTGCTCAAACTACAGAAAAGGAGAGTCCTGAGGTTCTTCCATTTCGGTTCGTTTTTTGATTTGTGCCTTCTA
****************************************************************************........((((((...(((((....(((.((.((((.......)))).)).))).......))))).)))))).*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M053
female body
 SRR902009
testis
.......................................................................................................................................................................................CCAACTACAGAAAAGGA.................................................. 17 1 1 5.00 5 4 0 0 1 0 0 0 0
.......................................................................................................................................................................................CCAACTAAAGAAAAGGAG................................................. 18 2 9 2.89 26 1 17 1 5 1 0 1 0
.......................................................................................................................................................................................CCAACTACAGAAAAGGAGA................................................ 19 1 1 2.00 2 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................CCAACTACAGAAAAGGAG................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................CGGCTGCTCAAGCTACATAA....................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CAAACTACAGGAAAGGAG................................................. 18 1 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................CAAACTACAGGAAAGGAGACCC............................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................AGAAAAGTAAAGTCCTGAGGT...................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................AACTACAGAAAAGGAGAC............................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGGAG................................................. 17 1 1 1.00 1 1 0 0 0 0 0 0 0
......TAGGTTTCTTAGGTGTGTCTT............................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................AAAAGGGGAGTTCTGAGGT...................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CAAACTACAGGAAAGGAGAC............................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGGAGA................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AAACTACAGGAAAGGAG................................................. 17 1 4 0.50 2 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................CCAACTACAGAAAAGGAGGC............................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCAACTACAGAAAAG.................................................... 15 1 8 0.25 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGGAGG................................................ 18 2 4 0.25 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................AAACTACAGGAAAGGAGACCC............................................. 21 3 4 0.25 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGGA.................................................. 16 1 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCAACTACAGAAAAGGAGGT............................................... 20 3 5 0.20 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................AGCCAACTACAGAAAAGGAG................................................. 20 3 5 0.20 1 0 0 0 1 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGGAGAC............................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0
..............TTAGGTGAGTCTTTTGGAGTC....................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................AACTAAAGAAAAGGAG................................................. 16 1 12 0.17 2 0 1 0 1 0 0 0 0
.........................................................................................................................................................................................AACTACAGAAAAGGAGGTCC............................................. 20 3 6 0.17 1 1 0 0 0 0 0 0 0
......TCGGTTTCCAATGTGTGTCTTT.............................................................................................................................................................................................................................. 22 3 6 0.17 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................ACAGAAAAGGAGACTC............................................. 16 1 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGGAGC................................................ 18 2 9 0.11 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CCAACTACAGAAAAGGAGCT............................................... 20 3 11 0.09 1 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................AAAGGGGAGTTCTGAGGT...................................... 18 2 12 0.08 1 0 1 0 0 0 0 0 0
..............TTTGGTGTGTGTTTTGGCTT........................................................................................................................................................................................................................ 20 2 12 0.08 1 0 0 0 0 0 0 0 1
.....TACGGTTTCTTAGGTGTG................................................................................................................................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................ACTACAGGAAAGGAG................................................. 15 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................TCAACTAAGTCCACT.................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 1 0 0 0 0
........................................................................................................................................................................................CAACTACAGAAAAGG................................................... 15 1 16 0.06 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................GAGAGTCTTGAGGTT..................................... 15 1 17 0.06 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................ACAGAAAAGGAGACCCATGA......................................... 20 3 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................ACTAAAGAAAAGGAG................................................. 15 1 20 0.05 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................AACTACAGAAAAGGAGCCC.............................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................CTACAGAAAAGGAGCT............................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................AACTACAGGAAAGGA.................................................. 15 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:7430809-7431058 - dsi_19364 CGCTTCAGCCAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACCGAAGATTTAGCTGATTCAGGTG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAGTCGCAGCCCATACTGCGGATAACATTGAAAAAGACGGTAA------AAATAGATCAACAGAAGATGTGTTTATGTATGCTTTAGACTGTATTTCGAGTGCCGACGAGTTTGATGTCTTTTCCTCTCAGGACTCCAAGAAG-GTAAAGCCAAGCAAAAAACTAAACAC---------GG-------------AAGAT
droSec2 scaffold_1:4279505-4279739 - CGCTTCAGCCAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACCGAAGATTTAGCTGATTCAGATG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAGTCGCAGCCCATACTGCGGAAAACATTGAAAAAGACGGTAA------AAATACATCAACAGAAGATGTGTTTATGTATGCTTTAGACTGTATTTCGAGTGCCGAG---------------TCCTCTCAGGACTCCAAGAAG-GTAAAGCCAAGCAAAAAACTAAACAC---------GG-------------AAGAT
dm3 chr2R:6692351-6692600 - CGCTTCAGCTAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACCGAAGATTTAGCTGATTCAGATG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTCCCAGCCAATACTGCGGATAACATTGAAAAAGACCGGAA------AAATACATCAACAGATGATGTGTTTATGTATGCTTTAGACTGTATATCGAGTGCCGACGAGTTTGATGCCTTTGCCTCTCAGGACTCCAAGAAG-GCGAAGCCAAGCAAAAAACTAAACAC---------GG-------------AAAAC
droEre2 scaffold_4845:19082943-19083225 + CGCTCCAGCCAT---CG------------------------------------------------AA---T---------------------CCACACAGAATACCGATGATTTGGCTGAGCCAGAAGGAGAGAGTAAAGAAGCATTAATAGATGAAAAATTAAAGTCAAAGGAA---------------------------------------------------GATGATG------------------------------AAGATGAAGTCACAGCACATACTGCGAAAAGCATTGAAAAGAACCGGAA------AAACACATCAACAGATGATGTGTTTATGGATGCTTTAGAGACCATTTCCAGTTCCGATGAGTTTGATGCCTTCGCCTCTCAGGACTCCAAGAAG-ATCAAGTCAAGCAAAGAACTAAACAC---------GG-------------AAGAT
droYak3 2R:2438302-2438578 + CATTCCAGCCAA---AG------------------------------------------------AA---T---------------------CCACACAGATTACCGATGATTTGACTGAGCCAGAAAGGGAGAGTAAAAAACTATTAATAGATGAAAAATTAGAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAATCACAGAAAATATTGCGGATAACATTGAAAAAGACCTGAA------AAACACATCAACAGATGATGTGTTTATAGATGCTTTAGAGAGCATTTCCAGTTCCGATGAGTTTGATGCCTTCACCTCTCAGGACTCTAAGAAG-GTCAAGCCAGGAAAAAAACTAAACGC---------GG-------------AAAAA
droEug1 scf7180000409672:4321365-4321647 + CACTCCAACCAA---AG------------------------------------------------AA---T---------------------CAAAAGATAATCTCGATGTTTTGGCTGGACCAAATGAAGACAAAATAGAAGAAGTAACAGATGCAAATGAGACATCGGAGGAA---------------------------------------------------A------------------------------------AAGATGAAGCCAAGGCGCAAGCTGACGATATCAAAGAAAAGGTCCGGGCAAAGCGAGTCGCATCCACGGATGATGTGTTTATGGATGCCCTAGACAGCATTTCCAGTTCAGATGAGCTCGATGCTCCCGCTGTTCAGGATGAAAAGAAG-GCAAAGCATAGCAAAGAGCTGAGCAC---------CG-------------AGGAT
droBia1 scf7180000301506:401386-401668 - CGCCCCAGCTGA---GG------------------------------------------------AA---A---------------------CCACAGAGGAAATCGATGATTTGAATGAGCCGGTCGAAGAGAATATTGAGAAAGTAACAGAAGAAAAGAAAGAATCGGAAGAA---------------------------------------------------A------------------------------------AAGAAGAAGACAGACCACATGATGTGGATAACATTGAAAAGGTCCCGGAAAAGCTAAACACATCCACGGATGATGTGTTTATGGATGCCCTAGACAGCATTTCCAGTTCCGATGAGTTTGATATCGTCGCTCGACAGGAGTCCCAGAAA-GCCAAGCAAAGCAAAAATCTGAACAC---------CA-------------ATAAT
droTak1 scf7180000415877:111236-111518 + CACTCCAGCTAA---AG------------------------------------------------AA---T---------------------CCACAGAGCAAATCGCTGATTTGGCTGAGCTGGACGAAGAAAACATTGGAAAAGTAACAGACGGCAAAGAGAAATCGGAAGAA---------------------------------------------------A------------------------------------AAGAGGAGGCCAAACCACATGCTGTGAATAACAATGAAGGAGTCCCGGCAAAAGTAAACACCTCCACGGATGATGTGTTTATGGATGCGCTAGACAGTATTTCCAGTTCCGATGAGTTTGACGCCATCGCTTCCCACGACTCCAAGAAG-GCCAAGCTAAGCAAAGATCTCGACAC---------CG-------------AGGAT
droEle1 scf7180000491201:146870-147152 - CGCTACAGCCGA---AG------------------------------------------------GA---T---------------------CGACGGAGGAAACCGAAGATTTGGCCGAGGCGACAGAGGAGTCTATTGGAAAAGAAATAGACGCGGAAAAAAAATTACAAGAG---------------------------------------------------A------------------------------------AAAATGTGGTCAAGACACATTCTGTGGATAACAATGAAAAAGTCCGGGCTAAGGTAAACAGCTCCTCGGATGATGTGTTTATGGATGCTCTTGACAGCATTTCCAGCTCCGATGAGTTTGATGCCTTCAGTTCTCAGGACAGCAAGAAG-CCCAAGCAAAGCAACAAGCTTAACGC---------CG-------------TTGAT
droRho1 scf7180000779999:65550-65832 + CGCTCCAGCCAA---AG------------------------------------------------AA---T---------------------CGTCGGAGGAAATCAAAGATATAGCTGAGCTGACAAAGGAAATTATTGAAAAACAAAAAGACGCGAAGGAAAAATCGGAAGAA---------------------------------------------------G------------------------------------AAGATGTGGGCAAAGCACATGCTGCGCATAACAATAAAAAAGAACGGGCAAAGGTAAACACCTCCTCGGATGATGTGTTTATGGATGCTCTAGACAGCATTTCCAGTTCTGATGAGTTTGATGCTTTCGGTCCTCAGGATTCTGACAAG-CCCAAGCTAAGTAAAAAGCTTAATAC---------CG-------------GGGAT
droFic1 scf7180000454066:999488-999773 + TGCCGAACTCGC---AA------------------------------------------------CAGATT---------------------CAAAAGAGAAGGTCGACGATTTAGCAGAGCCCGAAGAACCGAATATAGAAAAGACAACCGAGGATAATGTCAAATCAGAAGAG---------------------------------------------------G------------------------------------AAGAAGATTGCAAAGCACATGCTGTAGATAATAATGAAAAAGTCAAGGAAAAGTTAAATACCTCAACGGATGATGTGTTTATGGATGCTCTTGACAGCATTTCCAGTTCCGATGAGTTTGATGGTTTTGGCTCTCAGGACTCCAAGAAG-ACAAAGTTAGGCAGAAAGCCAAACCC---------CG-------------ACGAC
droKik1 scf7180000302481:170933-171191 - CACTCCAGATAA---AGAAAAAGTAGTAGAAGATATCG------------------GAGAAGGC------TGTTCGGATGTTCAAGAGAAAGAAATAGAGGAAGTGGATGCTTTGCCCGAAGCAGAGGAAGAAAATA------------------------------------------------------------------------------------------------------------------------------------CTTCCAA---------------------------AATACCAACTAAACTAAACACCTCCAAGGAGGATGTGTTTGAGGATGCCCTAGACAACATTTCTAGCTCGGATGAGTTCGATGCATTCGGTTCTCAAGACTCAAAGAAA-GCTGAACCAAGCAAACAGCCGGCCCC---------TG-------------AAAAA
droAna3 scaffold_13266:18185855-18186113 - CGTTGAAGTCATCGAAG---------------AT------------------------------------C---------------------C---------------TGACCAGGACGTGCCAGCACCTGAGAGCTCTACGGACGCGAAAGAGGAAGAGAGCGAGCCAAAGCCG---------------------------------------------------G---------AAGAAAATTCTACCTCAGCAGCCGAAGTGGGGGAGGAC---------------------------AAGACATCGGCGAAGATAAACACC---TCGGAAGACGAGTTCGAGGACGCTTTGGACAATATTTCCAGTGCCGATGAGTTCGAGGGAGCTGCTTCGCAGAAATCCCTGAAAACAAAAGCCAAGAA----------GGC---------CG-------------TCAAG
droBip1 scf7180000396735:1463660-1463913 - CCGGAGA--------------------------TCCTACCAAAGACAAACCAGCACTTGAGA---GC---T------------------------------------------CTACAGACGCGCTTG------------AAAAAAAGAAAGAAGAAGAGAAGG---------AG---------------------------------------------------AAAGATCCGGA---AAATTTGAGCTCTGCAGCGGAAGAGGGTGAGGATAA---------------------------AACATCGTCAAAAATAAACACC---TCGGACGACGTGTTCGAGGATGCTTTAGACAATATTTCCAGTGCGGATGAGTTTGAGGCAGTTGGTTCGAAAAAGTCGAAAAAA-GCCAAAACAGGAGA---------------------CG-------------TTAAG
dp5 3:15957704-15957938 + CGAGACAGGGGA---GG------------------------------------------------AA---A---------------------TTAAAGAAGAAGCATCACATGTGAAAAAACCTGGGG------------------------------------------AGAAA---------------------------------------------------ACCAATG------------------------------GAGATAGTTCTGCAGCC---------------------GAGATCAAGGAAAAGCTAAGCCAATCCACGGATGATATTTTTCTGGATGCTCTGGATAACATAACGAGTTCAGATGATTTTGATGCCACCAGTTCCCAGGACTTGAAGAAG-TCGCAGACATCCGACGAGAAAACCGCTGAGACTTCCG-------------AGGAT
droPer2 scaffold_4:805198-805483 - CGCTGAAGCTGA---AA------------------------------------------------GC---T---------------------ATGTGGAAAA------------------------------------------AGTGGTAGACAACAAAGAAGATTCCGAGACAGGGGAGGAAATTAAAGAAGAAGCATCACATGTGAAAAAACCTGGGGAGAAAACCAATG------------------------------GAGATAGTTCTGCAGCC---------------------GAGATCAAGGAAAAGCTAAGCCAATCCACGGATGATATTTTTCTGGATGCTCTGGATAACATAACGAGTTCAGATGATTTTGATGCCACCAGTTCCCAGGACTTGAAGAAA-TCGCAGACATCCGACGAGAAAACCGCTGAGGCTTCCG-------------AGGAT
droVir3 scaffold_12875:16726544-16726796 - TATTGCTGCCAA---TG------------------------------------------------AG---G---------------------ATGAAAAA---ACAGCAGTAAAGGATGTGCTAGCCGAGGAAAATATGGTAGTTGGTAAAGGCGAGGACGCGGAAATCTCAAAA---------------------------------------------------A------------------------------------CAGATAAGTCCAAAGCGGACG------------AT------GAACAGACAAGCCTCAATAACTCCAACGATGAGGTCTTCATGGATGCATTGGAAAATATATCCAGCTCAGATGAGTTCGAAGCATTGGCAAATCAGCAAATTAAAAAA----------TCCGATGAACTAAATCC---------CC-------------AAAAG
droMoj3 scaffold_6496:10370021-10370298 - GAATTCAACGGA---AACTAAAGAAAAACAAAATATCA------------------ATGAAAGTGAGATCGGTGCAACAGTGAAAGAGAATGTGCCGACCGATGAAAATATGTTAGATGATGAAACGGAAGAAAAT---------------------------------------------------------------------------------------------ACTA------------------------------AAAAGGATCCGAAAATC---------------------ACGAACACAAAAAGATCGCAAGACTCGAATGAGGATGTCTTTTTGGATGCTTTGGAAAACATCTCTAGTTCAGATGAGTTTGAGGCACAGGGCGATCAGAAAACTGTAGAA----------ACTGATGAGCCAATTCC---------CAATGAGCA------AAGCA
droGri2 scaffold_14722:41122-41327 - GAAAGTCGTCGA---AA------------------------------------------------AT---G---------------------ATATAAAGGACGGCGAAATTTCGACTGGAGAAATGCCAGA---------------------------------------AGCA---------------------------------------------------A------------------------------------------CAGCTAC---------------------------AGCCAGAACCGACTTGGATAACTCAAATAATGAAGAGTTCATGGATGCATTGGAGACCATTTCGAGTTCCGATGAGTTCGAGGCAATTGCCGATGAAAAACTCAAAG-------------------AGCCAGTCCC---------CGAAAAGGAGAGCATTAAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGCTTCAGCCAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACCGAAGATTTAGCTGATTCAGGTG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAGTCGCAGCCCATACTGCGGATAACATTGAAAAAGACGGTAA------AAATAGATCAACAGAAGATGTGTTTATGTATGCTTTAGACTGTATTTCGAGTGCCGACGAGTTTGATGTCTTTTCCTCTCAGGACTCCAAGAAG-GTAAAGCCAAGCAAAAAACTAAACAC---------GG-------------AAGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................TATGTATGCTTTAGACTGTATTTCGAG...................................................................................................2713.00300000000210000000
...............................................................................................................................................................................................................................................................................................................................................................TTTAGACTGTATTTCGAGTGCC...............................................................................................2212.00200200000000000000
................................................................................................................................................................................................................................................................................................GGATAACATTGAAAAAGACG................................................................................................................................................................2012.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................TGTATTTCGAGTGCCGACGAGTTTGA....................................................................................2612.00200000010010000000
.................................................................................................................................................................................................................................................................................................................................................................TAGACTGTATTTCGAGTGCCGACGAGT........................................................................................2712.00200000002000000000
.................................................................................................................................................................................................................................................................................................................................................................TAGACTGTATTTCGAGTGCCGACGAGTT.......................................................................................2811.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................TTATGTATGCTTTAGACTGTATTTCGAG...................................................................................................2811.00100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................TAGACTGTATTTCGAGTGCC...............................................................................................2011.00110000000000000000
..........................................................................................................................................................................................................................................................................................TACTGCGGATAACATTGAAAAAGAC.................................................................................................................................................................2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................TGCTTTAGACTGTATTTCGAGTGCCGA.............................................................................................2711.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................TGTTTATGTATGCTTTAGACTGTAT.........................................................................................................2511.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTAAACAC---------GG-------------AAGAT1911.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................TTAGACTGTATTTCGAGTGCCGACGAGT........................................................................................2811.00100000000010000000
........................................................................................................................................................................................................................................................................................CATACTGCGGATAACATTGAAAAAGA..................................................................................................................................................................2611.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................TTTAGACTGTATTTCGAGTGCCGACGAGTT.......................................................................................3011.00100000010000000000
..........AA---AG------------------------------------------------AA---T---------------------CCACACAGAAA.............................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.........................................................................................................................TCAGGTG---------------------------AAATATTAAAGTCAAAGGA......................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................AGACTGTATTTCGAGTGCCGACGAG.........................................................................................2511.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTCAGGACTCCAAGAAG-GTAT...................................................2611.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................AAATAGATCAACAGAAGATGTGT...............................................................................................................................2311.00101000000000000000
...............................................................................................................................................................ATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------A............................................................................................................................................................................................................1811.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACTCCAAGAAG-GTAAA..................................................2111.00100000000000001000
..............................................................................................................................................................TATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGA.........................................................................................................................................................................................................2211.00100000000100000000
..............................................................................................................................TG---------------------------AAATATTAAAGTCAG..........................................................................................................................................................................................................................................................................................................1740.25100000000001000000
droSec2
CGCTTCAGCCAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACCGAAGATTTAGCTGATTCAGATG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAGTCGCAGCCCATACTGCGGAAAACATTGAAAAAGACGGTAA------AAATACATCAACAGAAGATGTGTTTATGTATGCTTTAGACTGTATTTCGAGTGCCGAG---------------TCCTCTCAGGACTCCAAGAAG-GTAAAGCCAAGCAAAAAACTAAACAC---------GG-------------AAGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................ATGAAGTCGCAGCCCATACTGCGGA.................................................................................................................................................................................2512.0020110
................................................................................................................TTAGCTGATTCAGATG---------------------------AA.......................................................................................................................................................................................................................................................................................................................1811.0010010
.......................................................................................................ACCGAAGATTTAGCTGATTCAGATG---------------------------.........................................................................................................................................................................................................................................................................................................................2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................ACTGTATTTCGAGTGCCGAG---------------T............................................................................2111.0010100
................................................................................................................TTAGCTGATTCAGATG---------------------------AAAT.....................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................AAAAGACGGTAA------AAATACATCAAC..........................................................................................................................................2411.0011000
dm3
CGCTTCAGCTAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACCGAAGATTTAGCTGATTCAGATG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTCCCAGCCAATACTGCGGATAACATTGAAAAAGACCGGAA------AAATACATCAACAGATGATGTGTTTATGTATGCTTTAGACTGTATATCGAGTGCCGACGAGTTTGATGCCTTTGCCTCTCAGGACTCCAAGAAG-GCGAAGCCAAGCAAAAAACTAAACAC---------GG-------------AAAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................GAAAACCGAAGATTTAGCTGATTCAGATG---------------------------.........................................................................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTCCCAGC.............................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GTTTGATGCCTTTGCCTCTCAGGAC.................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AGAAAACCGAAGATTTAGCTGATT..........................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGA.........................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CGAAGATTTAGCTGATTCAGAT.....................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TATGCTTTAGACTGTATATCGAGT..................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGCTGATTCAGATG---------------------------AAATATTAAAGTC............................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GAAGATTTAGCTGATTCAGATG---------------------------A........................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCAGGACTCCAAGAAG-GCGAAG.................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
............................................................................................................................................................................................................................................................................................................................................................................TCGAGTGCCGACGAGTTTGATGCCTTT.............................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATCGAGTGCCGACGAGTTTGAT...................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TACTGCGGATAACATTGAAAAAGACCGGA.............................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGACCGGAA------AAATACATCAACAGA.......................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTCCCAGCC............................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AGGAA---------------------------------------------------G------------------------------------AGGATGAAGTCCCAG..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATCGAGTGCCGACGAGTTTGATGC.................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGAAG-GCGAAGCCAAGCAAAAAAC....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTGAAAAAGACCGGAA------AAAT..................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TCGAGTGCCGACGAGTTTGAT...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................AAGATTTAGCTGATTCAGATG---------------------------AAAT.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATTCAGATG---------------------------AAATATTAAAGTC............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATG.......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAGGACTCCAAGAAG-GCGAA..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................GTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGA......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TAGACTGTATATCGAGTGCCGACGAG.........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TAGACTGTATATCGAGTGCCGAC............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ATGCTTTAGACTGTATATC......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CACACAGAAAACCGAAGATTTAGC...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGACCGGAA------AAATACATCAAC..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGT...................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AGATGATGTGTTTATGTA........................................................................................................................1811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTCTCAGGACTCCAAGAAG-GC.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATCGAGTGCCGACGAGTT.......................................................................................1911.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AGAAAACCGAAGATTTAGCTGAG...........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCAGGACTCCAAGAAG-GCGAAGCCAA.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGTATGCTTTAGACTGTA..........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TGTATATCGAGTGCCGACGAG.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................AAACCGAAGATTTAGCTGATTCA........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ATTGAAAAAGACCGGAA------AAAT..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CCTTTGCCTCTCAGGACTCC..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGGACTCCAAGAAG-GCGAAGC................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...TTCAGCTAA---AG------------------------------------------------AA---T---------------------CCACACAGAA..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ATGCTTTAGACTGTATATCGAGTT.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGGACTCCAAGAAG-GCGAAGCCAAGCT..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TG---------------------------AAATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGG..........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAG....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................ATATTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------A............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATCGAGTGCCGACGAGTTTGATGCC................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAGGACTCCAAGAAG-GCGAAG.................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGGACTCCAAGAAG-GCGAA..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTC..................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AGAAAACCGAAGATTTAGCTGATTC.........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCCCAGCCAATACTGCGGATAACATTGAA.......................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGCTAA---AG------------------------------------------------AA---T---------------------CCACACAGAA..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGTGCCGACGAGTTTGATGCCTTTGC...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................AATACTGCGGATAACATTG.........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................AGAAAACCGAAGATTTAGCTGAT...........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTGATGCCTTTGCCTCTCAGGACTCCA.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TAGCTGATTCAGATG---------------------------AAATATTAA................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TGTTTATGTATGCTTTAGACTGTATA........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCAGCTAA---AG------------------------------------------------AA---T---------------------CCACACAGAAAACC..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTC..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AACCGAAGATTTAGCTGATTCA........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCCAAGCAAAAAACTAAACA..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AA---------------------------------------------------G------------------------------------AGGATGAAGTCCCAGC.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AAAGACCGGAA------AAATACATCAACAGAT......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCTCTCAGGACTCCAAGAAG-.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTC..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCAAGAAG-GCGAAGC................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TACTGCGGATAACATTGAAAAAGACCG...............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCTCTCAGGACTCCAAGAAG-GC.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCAAGCAAAAAACT...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................T---------------------CCACACAGAAAACCGAAGATTTAGCTGA............................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTGCCTCTCAGGACTCC..............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGTCCC................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCTCAGGACTCCAAGAAG-GC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TAAAGTCAAAGGAA---------------------------------------------------G------------------------------------AGGATGAAGT...................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCAACAGATGATGTGTTTATGTATGCT....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AAGTCCCAGCCAATACTGCG...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGCTCCAGCCAT---CG------------------------------------------------AA---T---------------------CCACACAGAATACCGATGATTTGGCTGAGCCAGAAGGAGAGAGTAAAGAAGCATTAATAGATGAAAAATTAAAGTCAAAGGAA---------------------------------------------------GATGATG------------------------------AAGATGAAGTCACAGCACATACTGCGAAAAGCATTGAAAAGAACCGGAA------AAACACATCAACAGATGATGTGTTTATGGATGCTTTAGAGACCATTTCCAGTTCCGATGAGTTTGATGCCTTCGCCTCTCAGGACTCCAAGAAG-ATCAAGTCAAGCAAAGAACTAAACAC---------GG-------------AAGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGCCTCTCAGGACTCCAAGAAG-ATCA...................................................2711.0010000001
..........AT---CG------------------------------------------------AA---T---------------------CCACACAGAATACCGAT.......................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
............................................................................................................................................................................................................................................................................GAAGTCACAGCACATACTGCGAAA................................................................................................................................................................................2411.0010001000
.............................................................................................................................................................................................................................................................................................................................................TGATGTGTTTATGGATGCTTTAGA...............................................................................................................2411.0010001000
droYak3
CATTCCAGCCAA---AG------------------------------------------------AA---T---------------------CCACACAGATTACCGATGATTTGACTGAGCCAGAAAGGGAGAGTAAAAAACTATTAATAGATGAAAAATTAGAGTCAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAATCACAGAAAATATTGCGGATAACATTGAAAAAGACCTGAA------AAACACATCAACAGATGATGTGTTTATAGATGCTTTAGAGAGCATTTCCAGTTCCGATGAGTTTGATGCCTTCACCTCTCAGGACTCTAAGAAG-GTCAAGCCAGGAAAAAAACTAAACGC---------GG-------------AAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................CAAAGGAA---------------------------------------------------G------------------------------------AAGATGAAATCACA...............................................................................................................................................................................................2311.00100000010000
..........................................................................................................GATGATTTGACTGAGCCAGAAA....................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
.........................................................................................................CGATGATTTGACTGAGCC.........................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.................................................................................................................................................................................................................................................................................CACAGAAAATATTGCGGAT................................................................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GTTTATAGATGCTTTAGAGAGC...........................................................................................................2211.00101000000000
...............................................................................................................TTTGACTGAGCCAGAAAGGGA................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................ATTTCCAGTTCCGATGAGTT.......................................................................................2011.00100000010000
droEug1
CACTCCAACCAA---AG------------------------------------------------AA---T---------------------CAAAAGATAATCTCGATGTTTTGGCTGGACCAAATGAAGACAAAATAGAAGAAGTAACAGATGCAAATGAGACATCGGAGGAA---------------------------------------------------A------------------------------------AAGATGAAGCCAAGGCGCAAGCTGACGATATCAAAGAAAAGGTCCGGGCAAAGCGAGTCGCATCCACGGATGATGTGTTTATGGATGCCCTAGACAGCATTTCCAGTTCAGATGAGCTCGATGCTCCCGCTGTTCAGGATGAAAAGAAG-GCAAAGCATAGCAAAGAGCTGAGCAC---------CG-------------AGGATSizeHit CountTotal NormTotal
No Reads
droBia1
CGCCCCAGCTGA---GG------------------------------------------------AA---A---------------------CCACAGAGGAAATCGATGATTTGAATGAGCCGGTCGAAGAGAATATTGAGAAAGTAACAGAAGAAAAGAAAGAATCGGAAGAA---------------------------------------------------A------------------------------------AAGAAGAAGACAGACCACATGATGTGGATAACATTGAAAAGGTCCCGGAAAAGCTAAACACATCCACGGATGATGTGTTTATGGATGCCCTAGACAGCATTTCCAGTTCCGATGAGTTTGATATCGTCGCTCGACAGGAGTCCCAGAAA-GCCAAGCAAAGCAAAAATCTGAACAC---------CA-------------ATAATSizeHit CountTotal NormTotal
No Reads
droTak1
CACTCCAGCTAA---AG------------------------------------------------AA---T---------------------CCACAGAGCAAATCGCTGATTTGGCTGAGCTGGACGAAGAAAACATTGGAAAAGTAACAGACGGCAAAGAGAAATCGGAAGAA---------------------------------------------------A------------------------------------AAGAGGAGGCCAAACCACATGCTGTGAATAACAATGAAGGAGTCCCGGCAAAAGTAAACACCTCCACGGATGATGTGTTTATGGATGCGCTAGACAGTATTTCCAGTTCCGATGAGTTTGACGCCATCGCTTCCCACGACTCCAAGAAG-GCCAAGCTAAGCAAAGATCTCGACAC---------CG-------------AGGATSizeHit CountTotal NormTotal
No Reads
droEle1
CGCTACAGCCGA---AG------------------------------------------------GA---T---------------------CGACGGAGGAAACCGAAGATTTGGCCGAGGCGACAGAGGAGTCTATTGGAAAAGAAATAGACGCGGAAAAAAAATTACAAGAG---------------------------------------------------A------------------------------------AAAATGTGGTCAAGACACATTCTGTGGATAACAATGAAAAAGTCCGGGCTAAGGTAAACAGCTCCTCGGATGATGTGTTTATGGATGCTCTTGACAGCATTTCCAGCTCCGATGAGTTTGATGCCTTCAGTTCTCAGGACAGCAAGAAG-CCCAAGCAAAGCAACAAGCTTAACGC---------CG-------------TTGATSizeHit CountTotal NormTotal
No Reads
droRho1
CGCTCCAGCCAA---AG------------------------------------------------AA---T---------------------CGTCGGAGGAAATCAAAGATATAGCTGAGCTGACAAAGGAAATTATTGAAAAACAAAAAGACGCGAAGGAAAAATCGGAAGAA---------------------------------------------------G------------------------------------AAGATGTGGGCAAAGCACATGCTGCGCATAACAATAAAAAAGAACGGGCAAAGGTAAACACCTCCTCGGATGATGTGTTTATGGATGCTCTAGACAGCATTTCCAGTTCTGATGAGTTTGATGCTTTCGGTCCTCAGGATTCTGACAAG-CCCAAGCTAAGTAAAAAGCTTAATAC---------CG-------------GGGATSizeHit CountTotal NormTotal
No Reads
droFic1
TGCCGAACTCGC---AA------------------------------------------------CAGATT---------------------CAAAAGAGAAGGTCGACGATTTAGCAGAGCCCGAAGAACCGAATATAGAAAAGACAACCGAGGATAATGTCAAATCAGAAGAG---------------------------------------------------G------------------------------------AAGAAGATTGCAAAGCACATGCTGTAGATAATAATGAAAAAGTCAAGGAAAAGTTAAATACCTCAACGGATGATGTGTTTATGGATGCTCTTGACAGCATTTCCAGTTCCGATGAGTTTGATGGTTTTGGCTCTCAGGACTCCAAGAAG-ACAAAGTTAGGCAGAAAGCCAAACCC---------CG-------------ACGACSizeHit CountTotal NormTotal
No Reads
droKik1
CACTCCAGATAA---AGAAAAAGTAGTAGAAGATATCG------------------GAGAAGGC------TGTTCGGATGTTCAAGAGAAAGAAATAGAGGAAGTGGATGCTTTGCCCGAAGCAGAGGAAGAAAATA------------------------------------------------------------------------------------------------------------------------------------CTTCCAA---------------------------AATACCAACTAAACTAAACACCTCCAAGGAGGATGTGTTTGAGGATGCCCTAGACAACATTTCTAGCTCGGATGAGTTCGATGCATTCGGTTCTCAAGACTCAAAGAAA-GCTGAACCAAGCAAACAGCCGGCCCC---------TG-------------AAAAASizeHit CountTotal NormTotal
No Reads
droAna3
CGTTGAAGTCATCGAAG---------------AT------------------------------------C---------------------C---------------TGACCAGGACGTGCCAGCACCTGAGAGCTCTACGGACGCGAAAGAGGAAGAGAGCGAGCCAAAGCCG---------------------------------------------------G---------AAGAAAATTCTACCTCAGCAGCCGAAGTGGGGGAGGAC---------------------------AAGACATCGGCGAAGATAAACACC---TCGGAAGACGAGTTCGAGGACGCTTTGGACAATATTTCCAGTGCCGATGAGTTCGAGGGAGCTGCTTCGCAGAAATCCCTGAAAACAAAAGCCAAGAA----------GGC---------CG-------------TCAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................ACCTGAGAGCTCTACGGACGCGAA..............................................................................................................................................................................................................................................................................................................................2412.002000002
..................................................................................................................................................................................................................................................................................................................................................................GGACAATATTTCCAGTGCCGAT............................................................................................2211.001010000
.......GTCATCGAAG---------------AT------------------------------------C---------------------C---------------TGACCAGGA...............................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
CCGGAGA--------------------------TCCTACCAAAGACAAACCAGCACTTGAGA---GC---T------------------------------------------CTACAGACGCGCTTG------------AAAAAAAGAAAGAAGAAGAGAAGG---------AG---------------------------------------------------AAAGATCCGGA---AAATTTGAGCTCTGCAGCGGAAGAGGGTGAGGATAA---------------------------AACATCGTCAAAAATAAACACC---TCGGACGACGTGTTCGAGGATGCTTTAGACAATATTTCCAGTGCGGATGAGTTTGAGGCAGTTGGTTCGAAAAAGTCGAAAAAA-GCCAAAACAGGAGA---------------------CG-------------TTAAGSizeHit CountTotal NormTotal
No Reads
dp5
CGAGACAGGGGA---GG------------------------------------------------AA---A---------------------TTAAAGAAGAAGCATCACATGTGAAAAAACCTGGGG------------------------------------------AGAAA---------------------------------------------------ACCAATG------------------------------GAGATAGTTCTGCAGCC---------------------GAGATCAAGGAAAAGCTAAGCCAATCCACGGATGATATTTTTCTGGATGCTCTGGATAACATAACGAGTTCAGATGATTTTGATGCCACCAGTTCCCAGGACTTGAAGAAG-TCGCAGACATCCGACGAGAAAACCGCTGAGACTTCCG-------------AGGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................CAGCC---------------------GAGATCAAGGAAAAGCT......................................................................................................................................................2211.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGCTGAGACTTCCG-------------AGG..2111.0010100000000
droPer2
CGCTGAAGCTGA---AA------------------------------------------------GC---T---------------------ATGTGGAAAA------------------------------------------AGTGGTAGACAACAAAGAAGATTCCGAGACAGGGGAGGAAATTAAAGAAGAAGCATCACATGTGAAAAAACCTGGGGAGAAAACCAATG------------------------------GAGATAGTTCTGCAGCC---------------------GAGATCAAGGAAAAGCTAAGCCAATCCACGGATGATATTTTTCTGGATGCTCTGGATAACATAACGAGTTCAGATGATTTTGATGCCACCAGTTCCCAGGACTTGAAGAAA-TCGCAGACATCCGACGAGAAAACCGCTGAGGCTTCCG-------------AGGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................GCAGCC---------------------GAGATCAAGGAAA..........................................................................................................................................................1911.001000001
droVir3
TATTGCTGCCAA---TG------------------------------------------------AG---G---------------------ATGAAAAA---ACAGCAGTAAAGGATGTGCTAGCCGAGGAAAATATGGTAGTTGGTAAAGGCGAGGACGCGGAAATCTCAAAA---------------------------------------------------A------------------------------------CAGATAAGTCCAAAGCGGACG------------AT------GAACAGACAAGCCTCAATAACTCCAACGATGAGGTCTTCATGGATGCATTGGAAAATATATCCAGCTCAGATGAGTTCGAAGCATTGGCAAATCAGCAAATTAAAAAA----------TCCGATGAACTAAATCC---------CC-------------AAAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................TGGTAAAGGCGAGGACGCGGAAAT............................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000002
......TGCCAA---TG------------------------------------------------AG---G---------------------ATGAAAAA---ACAGCA.......................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000010000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AAGCGGACG------------AT------GAACAGACAAG.........................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GGTAGTTGGTAAAGGCGAGGAC....................................................................................................................................................................................................................................................................................................................2211.001000000000010000000000000000000000000000000000000000000000000000
...............TG------------------------------------------------AG---G---------------------ATGAAAAA---ACAGCAGTAAAGG................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................TAGCCGAGGAAAATATGGTA......................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAA----------TCCGATGAACTAAATCC---------CC-------------.....2711.001000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GATGAGGTCTTCATGGATG......................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AT------GAACAGACAAGCCTCAATAACTC.............................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AATAACTCCAACGATGAG...................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATCCAGCTCAGATGAGTTCGAAGC.................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................CTAGCCGAGGAAAATATGGTAGT....................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGGCGAGGACGCGGAAATCT..........................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
droMoj3
GAATTCAACGGA---AACTAAAGAAAAACAAAATATCA------------------ATGAAAGTGAGATCGGTGCAACAGTGAAAGAGAATGTGCCGACCGATGAAAATATGTTAGATGATGAAACGGAAGAAAAT---------------------------------------------------------------------------------------------ACTA------------------------------AAAAGGATCCGAAAATC---------------------ACGAACACAAAAAGATCGCAAGACTCGAATGAGGATGTCTTTTTGGATGCTTTGGAAAACATCTCTAGTTCAGATGAGTTTGAGGCACAGGGCGATCAGAAAACTGTAGAA----------ACTGATGAGCCAATTCC---------CAATGAGCA------AAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAA----------ACTGATGAGCCAATTCC---------CAATGAG.............2711.001000001
.............................................................................................................................................................................................................................................................................................................................CGCAAGACTCGAATGAGGATGTCT...............................................................................................................................2411.001100000
droGri2
GAAAGTCGTCGA---AA------------------------------------------------AT---G---------------------ATATAAAGGACGGCGAAATTTCGACTGGAGAAATGCCAGA---------------------------------------AGCA---------------------------------------------------A------------------------------------------CAGCTAC---------------------------AGCCAGAACCGACTTGGATAACTCAAATAATGAAGAGTTCATGGATGCATTGGAGACCATTTCGAGTTCCGATGAGTTCGAGGCAATTGCCGATGAAAAACTCAAAG-------------------AGCCAGTCCC---------CGAAAAGGAGAGCATTAAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:40 PM