ID:

dsi_19320

 Coordinate:

3r:1333251-1333400 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.5 -2.8 -2.8 -2.5

Flybase annnotation

exon [3r_1333401_1334430_-]; five_prime_UTR [3r_1333401_1334430_-]; intron [3r_1331927_1333400_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTTAACAGTGGAAGAGCAAGAAGCGACAGTATCGTCTAACGTTAATTTAGGTAAGTTTCGCGCAGCCCTCCTTTCGGATCCGTCGTTCTTTTTTAGTACTTGCTAAATCGCCCGAGGTTAAATGGTTGGTTAAACACTTGTCCCCAAAGTTTACGCTAGCCAGTGAATTTTGTTGTAAGCGCGGGCGCCAGTGTTGCAAAGCGCCTGTTGGGTCAGCTGATAAAGTTACATGCGTTCAGGTAAAACATCG
********************************************************************.......((..................................))***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M025
embryo
 O001
Testis
 O002
Head
...............................................................................................................TCGAGGTTAAATGGTTGGTTA...................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................TTGCAAAGCGCCTGTTGGGTC.................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
........................GACAGTATCGTCTAACGTTAA............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0
..............................................................................................AGTACTTGCTAAATCGCCC......................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1
..............................................TTAGGTAAGTTTCGCGCAGCC....................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
.......................................................................TTTCGGATCCGTCGTTCTTTTT............................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................TCCTTTCGGATCCGTCGTTC.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
........................GACAGTATCGTCTAACGTTAAT............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0
................CAAGAAGCGACAGTATCGTCT..................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....................AAGCGACAGTATCGTCTA.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0
................CAAGAAGCGACAGTATTGTCT..................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................AAGTTTACGCTAGTCAGTGA.................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................AGTACTTGCTAAATCGCCCGA....................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................CTCCTTTCGGATCCGTCGTTC.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........TGGAAGAGCAAGAAGCGACAGTATCGTC...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0
.....CAGTGGCAGAGCCAGAAGCGTC............................................................................................................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0
.TGAACAGTGGCAGAGCCAGAAG................................................................................................................................................................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0
........................GACAGTATCGTCTGACGTCG.............................................................................................................................................................................................................. 20 3 4 0.25 1 0 1 0 0 0 0 0 0
....................................................AAGTTTCGCGCAGCCT...................................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................CAGATGATAAAGTTCTATGC................. 20 3 13 0.08 1 0 0 0 0 1 0 0 0
..................................................................................................................AGGTCTAATGGTTGGT........................................................................................................................ 16 2 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGCGTTCATGTAAAAAA... 17 2 20 0.05 1 0 1 0 0 0 0 0 0
..............................................................................TCCGTCGGTCTTTTCTAAT......................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
...AACAGTGGTAGAGCAC....................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

CAATTGTCACCTTCTCGTTCTTCGCTGTCATAGCAGATTGCAATTAAATCCATTCAAAGCGCGTCGGGAGGAAAGCCTAGGCAGCAAGAAAAAATCATGAACGATTTAGCGGGCTCCAATTTACCAACCAATTTGTGAACAGGGGTTTCAAATGCGATCGGTCACTTAAAACAACATTCGCGCCCGCGGTCACAACGTTTCGCGGACAACCCAGTCGACTATTTCAATGTACGCAAGTCCATTTTGTAGC
*****************************************************************************************************************************************.......((..................................))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR902008
ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
....................................................................................................................................................................................................................................GTACGCAAGTCCATTTTGTAG. 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0
.................................................................................................................................................................................CCGCGCTCGAGGTCACAACG..................................................... 20 3 4 1.50 6 0 0 4 0 0 0 0 2 0
.............................................................................................ATCATGAACGATTTAGCGGGCT....................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGCGCTCGAGGTCACAACG..................................................... 19 2 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................................................................TCATGAACGATTTAGCGGGCTC...................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................ACAGGGGTTTCAAATGCGATC........................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................TCGGGAGGAAAGCCTAGGC........................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................CGGGAGGAAAGCCTAGGCAGC..................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................GCGCCCGCGGTCACAACGTTT.................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CCGCGCTCGAGGTCACAAC...................................................... 19 3 9 1.00 9 0 0 8 0 0 0 0 1 0
.........................TGTCATAGCAGATTGCAATTA............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................GGGGTTTCAAATGCGATCGGT........................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TCAATGTACGCAAGTCCATTT...... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................CCGCGCTCGAGGTCACAA....................................................... 18 3 20 0.65 13 0 0 9 1 1 0 0 2 0
..AGTGTCACCTTCTCGGTTTTCGC................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCGTGGTCACAACGTCTCGAG.............................................. 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................CGCGCTCGAGGTCACAA....................................................... 17 2 6 0.33 2 0 0 0 0 2 0 0 0 0
.................................................................................................................................................................................................................................AATGTCCGCAAGTCC.......... 15 1 5 0.20 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................GATCACGGGTTGCAAATGC............................................................................................... 19 3 12 0.17 2 0 1 0 0 0 0 0 0 1
...............................................................................................................................................................................................ACAGCGTTTCGCGGTCA.......................................... 17 2 11 0.09 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................GATCAAGGGTTGCAAATGC............................................................................................... 19 3 12 0.08 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GCCCACGGTCACAAGCTTT.................................................. 19 3 17 0.06 1 0 0 0 1 0 0 0 0 0
.............................................................CGTCGGTAGGAAAGCCAAT.......................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 1 0 0 0 0 0
.....................................................................GCAAAGCCTATGCAGC..................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1333201-1333450 - dsi_19320 GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTCTAACGTTAATTTAGGTAAGTTTCGCG-------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTCTT-T------TTTAGTAC--TTGCTAAAT---------------------------------C----------------------------GCCCGAGGTTAA-ATGGTTGGTTAAACACTTGTCCCCAAAGTT----TACGCTAGCC----AG------------------------TGAATTTTGTTGTAAGCGCGGG-C-------GCCAGTGTTGCAAAGCGCCTGTTGGGTCAGCTGATAAAGTTACATGCGT---TCAGGTAAAACAT----CG
droSec2 scaffold_6:1552835-1553084 - GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTCTAACGTTAATTTAGGTAAGTTGCGCG-------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTCTT-T------TTTTGTAC--TTGCTAAAT---------------------------------C----------------------------GCCAGAGGTTAA-ATGGTTGGTTAAACACTTGTCCCCAAAGTT----TACGCTAGCC----AG------------------------TGAATTTTGTTGTAAGCGCGGG-C-------GTCAGTGTTGCAAAGCGCCTGTTGGGTCAGCTGATAAAGTTACATGCGT---TCAGGTAAAACAT----CG
dm3 chr3R:1437592-1437841 - GTTAACAGTGGAAG------------AA---C---AAGAAGCG---------ACAGTATCGTCTAACGTTAATTTAGGTAAGTTGCGCG-------C----------ATTCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTCTT-A------TTTTGTAC--TTGCTGAAT---------------------------------C----------------------------GCCCGAGGTTAA-ATGGTTGGTTAAACACTTGTCCCCAGAGTT----AACGCTAGCC----AT------------------------TGAATTTTGTTGTAAGCGCGGT-C-------GCCAGTGTTGGGAAGCGTCTGTTAGGTCAGCTGATAAAGTTACATGCGT---GCAGGTAAAACAT----CA
droEre2 scaffold_4770:1708700-1708939 - GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCATCTAACGTTTATTTAGGTAAGTTGCG---------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTTAGATTCGTTGTTCTT-T------TTTTGTAC--TTGCTGAAT---------------------------------C----------------------------GCCCAAGGTTAA-ATGCTT-------TACTTGGCCCGAGAGTT----TTCGCAAGCC----AG------------------------TG-ATTTTTTTGTAAGCGCGGG-C-------GCCAGTGTTGCGAAGCAGTCGTTGGGTCAGCTGATAAAGTTACATGCGC---GCAGGTAAAACAG----CG
droYak3 3R:17403029-17403269 - GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTCTAACGTTTATTTAGGTAAGTTGCG---------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGAC---TAGTTCTC-T------TATTGTAC--GTGCGGAAT---------------------------------C----------------------------GACCAAGGTTAA-AGGGTT-------TACTTGGCCCGAGAGTTAGTCTACGCAGGCC----AG------------------------TG-ATTTTTTTGTAAGCGCGGG-C-------GCCAGTGTTGCAAAGCGGTCGTTCGATCAGCTGATAAAGTTACATGCGC---GCAGGTAAAACAG----CG
droEug1 scf7180000409766:395694-395941 - GTTAACAGTGGAAG------------TG---C---AAGAAGCG------GACGTAGTATCGTCTAACGTTAATTTAGGTAAGTTGCT---------C----------AGCTC-C----------------------------------------------------------------------------------------CGCTCTTTTCGATTCCAT-GT--------------------------------------------------------------------------TGATTCCGCAGTGGCGGCAGTCCAAGGTTACAATGGTT-------TACTTGTCCCGAAAGTT----TCCGCTAGCC----CG------------------------TG-TTTTTGTTGTAAGCGCGGA-C-------GTCAGTGTTGCAAAGCGGC-GTTTGGTCAGCTGATAAAGTTACATGCGCAG-GCAGGTAAAGCGATAATCG
droBia1 scf7180000302155:3330608-3330840 + GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACGTTAATTTAGGTAAGTTGCGCG-----CT--------CC-AGCCCTC----------------------------------------------------------------------------------------C------------------GCTCTT-C------TTTC--------GCCCCGC---------------------------------C----------------------------ACCCAAGGTTAC-TTTGCT--CGGTTTGCTTGGCCCG-AAGTC----TGCGCCAGCC----CG------------------------TG-TTTTTGTGGTAAGCGCGAG-C-------GCCAGTGTTGCACAGCGACCGCTGCGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAAAGCGG----CG
droTak1 scf7180000415754:355031-355272 + GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACGTTAATTTAGGTAAGATGCG---------C----------AGCCCTC----------------------------------------------------------------------------------------C-----GCTC-------------TTCATTTTCGCCTTGCTG--TGGCCGAGC---------------------------------C----------------------------GCCCAAGGTTAC-AAGGTT--TAATTTACTTGGCCCGAAAGTT----TCCGCTAGCA----AG------------------------AG-TTTTTGTTGTAAGCGCGGT-T-------GCCAGTGTTGCAAAGCGGTGGCCGGGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAAAACGG----CA
droEle1 scf7180000491021:1204-1422 + GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACGTTAATTTAGGTAAGTTGCG---------C----------AGCTTTT--------------------------------------------------------------------------------------------------------------CTC-A------ATTTATACGCTTGC--------------------------------------T----------------------------AACCAAGGTTAC-ATGGTT-------TACTTAGCCCGAAAGTT----TCCGCTCGCC----AG------------------------TG-TTTTTGTTGTAAGCGCGGG-C-------AACAGTGTTGCAAAGCGGCCGTTGGGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAAATC--------
droRho1 scf7180000760205:10129-10353 + GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACATTAATTTAGGTAAGTTGCCC-C-----------------TGCTTGC--------------------------------------------------------------------------------------------------------------CTC-A------TTTTGT----TCGCTGTGC---------------------------------C----------------------------AACCAAGGTTAT-ATGGTT-------TACTTAGCCCGAAAGTT----TCCGATCGTA----AG------------------------TG-TTTTTGTTGTAAGCGCGGG-C-------GCCAGTGTTCCAAAGCGCCCGTCTTGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAATTCGG----CA
droFic1 scf7180000453850:839699-839928 - GTTAACAGTGGAAG------------TG---C---AAGAAGCA---------GCAGTATCGTCTAACGTTAATTTAGGTAAGCT---------------------------TTC----------------------------------------------------------------------------------------C-----TAT---------TGTT----ATTT---TCGTTGAT--TTGCTGTGC---------------------------------C----------------------------GCCCAAGGTTAC-ACGGTT-------TACTTAACCCGAAAGTT----TCCGCTCGTCCCGCAA------------------------TGGTTTTTGTTGTAAGCGCGAG-C-------GCCAGTGTTGCAAAGCGGTTGTTGGGTCAGCTGATAAAGTTACATGCGCCGGGCAGGTAAAACGA----C-
droAna3 scaffold_13340:18625966-18626204 + GTCAACCGTGGAAG------------TGGCAGTGCAAGAAGCG---------GCAGTATCATCTAACATTAATTTAGGTAAATAAATG-GTGTAAGCA--GCAA--G--CTTTT------------------T--CATG----------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------GTCCAAGGTTGC-ATTGTTA----------------TAAAGTT----TCCGTTCGCC----ATTGGGAGCGGAGCGGGAGCTCTGTGGG-TGTTTGTTGTAAATGG-CT-A-------GCCAGTGTTGGTAAGCGTCCGTCGGGTCAGCTGATAAAGTTACATGCGCAGGCCAGGTAAACCA-------
droBip1 scf7180000395652:543192-543416 - GTCAACCGTGGAAG------------TGGCAGTGCAAGAAGCG---------GCAGTATCATCTAACGTTAATTTAGGTAAATAAATA-GTGTAAGC-----AA--G--CTTTT------------------T--CATG----------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------GTCCAAGGTTGT-ATTGTTA----------------TAAAGTT----T-CGTTCGCC----AG------TTGTGGT----CTCTATGGG-TTTTTGTTGTAAATGG-CT-A-------GCCAGTGTTGGAAAGCGTCCATCGGGTCAGCTGATAAAGTTACATGCGCAGGCCAGGTAAACCA-------
dp5 2:17303211-17303424 - ATTAACAGTGGAAG------------TG---G---AAGAAGGC---------GCACTATCATCTAACGTTAATTTAGGTAAGTCGAG--GTAGAGGCA--GAAG--A-------------------------------------------------------------------------------------------------------------------------------------------GG-----TTTTGTTGTT-------------------------------------------------------CCAAGGCTAT-TTTG--------------------------------CCATCGC----------GACCAAAACTACA----CTCGAG-TGTTTGTTGTAAGCGCCGTTAGCATAAGAGTAGTGTTGAAAAGCTCCCGCCTGGTCAGCTGATAAAGTTACATACGC-----ACGTAAAATA------G
droPer2 scaffold_0:11148400-11148613 - ATTAACAGTGGAAG------------TG---G---AAGAAGGC---------GAACTATCATCTAACGTTAATTTAGGTAAGTCGAG--GTAGAGGCA--GAAG--T-------------------------------------------------------------------------------------------------------------------------------------------GG-----TTTTGTTGTT-------------------------------------------------------CCAAGGCTAT-TTTG--------------------------------CCTTCGC----------GACCAAAACTACA----CACGAG-TGTTTGTTGTAAGCGCCGTTAGCATCAGAGTAGTGTTGAAAAGCTCCCGCCTGGTCAGCTGATAAAGTTACATACGC-----ACGTAAAATA------G
droWil2 scf2_1100000004943:6089493-6089565 - ATTCAAAGTGGAAGTGGACGGAGAAGAAGAAGTAAAAGGAGCA---------GCAGTATCATCTAACATTATTTTAGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:8279557-8279803 - ATTAACAGTGGCAG------------AAGAGG---AAGAAGCA------GCAGCATTATCATCCAACGTTCATTTAGGTAAGTATTG-----TAAAC-----AAC--CGCCACCCCTTCAGCCCTCACAGTTCCATCTAGT------------------------------------------------TGCTATTGGCTTAAG--------------------------------------C--TCG-----CTTTTCCGTTTCAAGGCTAGCTCTG-ACGCTAATTGGCCAATGTTGAATTCGC-------------------------------------------------------------------------------------------------TGCAATTTGTTGTAAACGAA-----------TTCAGTGTTGCAAAACATCCATT-GGTCAGCTGATGAAGTTACATACAT----------------------
droMoj3 scaffold_6540:23507247-23507504 - AGTAACAGTGGCAG------------AAGAGG---AAGAAGCA------GCAGCATTATCATCCATCGTTCATTTAGGTAAGTGTACT-GTAAAAT--------CC-AACA--ACGTTCAGCATTCGCAGTCAAACACAGG-------TCATAG----GTTTATTTGTTGCTTA----------------------------AG--------------------------------------T--TTG-----CT-----G-TTCAAGGCTAGCCCTAAACGCTAATTGGCCATAGTCGAAATCGC-------------------------------------------------------------------------------------------------TGTGTTTTGTTGTAAGCGAA-----------ATCAGTGTTGCAAATCGTAAAT-TGGTCAGCTGATGAAGTTACACATAT---ATATGTA------------
droGri2 scaffold_15074:4881377-4881670 - ATTAACAGTGGAAG------------AGGAAG---AAGAAGCAGCACCAGCAGCATTATCATCCAACGTTCATTTAGGTAAGTGAATA-GTCAAATATTTTTAA--A--TTTCT------------------TCATCTAGTCTATTAGTTGTAGTCTAGTCTATTAGTTGTTTATGTTGCTGCTGCTGCTGCTAAAAGCTAAAG------------------CTCTT-T---------------------------------TTCAAGGCTAGCCCTGAACGCTAATTGGCCAAAGTTGAATTCGC------------------------------------------------------------AGCCGCA----GC------------------------AGCATTTTGTTGTAAGCGAA-----------AACAGTGTTGCCAAACGGCACATTGGTCAGCTGATGAAGTTACACACAT----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTCTAACGTTAATTTAGGTAAGTTTCGCG-------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTCTT-T------TTTAGTAC--TTGCTAAAT---------------------------------C----------------------------GCCCGAGGTTAA-ATGGTTGGTTAAACACTTGTCCCCAAAGTT----TACGCTAGCC----AG------------------------TGAATTTTGTTGTAAGCGCGGG-C-------GCCAGTGTTGCAAAGCGCCTGTTGGGTCAGCTGATAAAGTTACATGCGT---TCAGGTAAAACAT----CGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAAGCGCCTGTTGGGTC...........................................2111.00100000000100000000
..........................................G---------ACAGTATCGTCTAACGTTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
..............................................................................................................................................................................................................................................AGTAC--TTGCTAAAT---------------------------------C----------------------------GCCC.........................................................................................................................................................................................1911.00100000100000000000
.........................................................................TTAGGTAAGTTTCGCG-------C----------AGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
................................................................................................................................................................................................................TTTCGGATCCGTCGTTCTT-T------TT............................................................................................................................................................................................................................................................................2211.00100000000000010000
................................................................................................................TC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTC........................................................................................................................................................................................................................................................................................2011.00100000000010000000
..........................................G---------ACAGTATCGTCTAACGTTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...............................C---AAGAAGCG---------ACAGTATCGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
......................................AAGCG---------ACAGTATCGTCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
..............................................................................................................................................................................................................................................AGTAC--TTGCTAAAT---------------------------------C----------------------------GCCCGA.......................................................................................................................................................................................2111.00100000000010000000
...............................................................................................................CTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTC........................................................................................................................................................................................................................................................................................2111.00100000000010000000
........TGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
...............................................................................AAGTTTCGCG-------C----------AGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................1660.17100000000001000000
droSec2
GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTCTAACGTTAATTTAGGTAAGTTGCGCG-------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTCTT-T------TTTTGTAC--TTGCTAAAT---------------------------------C----------------------------GCCAGAGGTTAA-ATGGTTGGTTAAACACTTGTCCCCAAAGTT----TACGCTAGCC----AG------------------------TGAATTTTGTTGTAAGCGCGGG-C-------GTCAGTGTTGCAAAGCGCCTGTTGGGTCAGCTGATAAAGTTACATGCGT---TCAGGTAAAACAT----CGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTACATGCGT---TCAGGTAAAACAT----C.2611.0010010
...............................................................................................................................................................................................................................................................................................................................AGAGGTTAA-ATGGTTGGTT......................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGCGCCTGTTGGGTCAG.........................................2111.0011000
............AG------------AG---C---AAGAAGCG---------ACAGTATCGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
..........................................G---------ACAGTATCGTCTAACGTTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....................................................................................CGCG-------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGAT.................................................................................................................................................................................................................................................................................................2111.0011000
dm3
GTTAACAGTGGAAG------------AA---C---AAGAAGCG---------ACAGTATCGTCTAACGTTAATTTAGGTAAGTTGCGCG-------C----------ATTCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTCTT-A------TTTTGTAC--TTGCTGAAT---------------------------------C----------------------------GCCCGAGGTTAA-ATGGTTGGTTAAACACTTGTCCCCAGAGTT----AACGCTAGCC----AT------------------------TGAATTTTGTTGTAAGCGCGGT-C-------GCCAGTGTTGGGAAGCGTCTGTTAGGTCAGCTGATAAAGTTACATGCGT---GCAGGTAAAACAT----CASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................AGCG---------ACAGTATCGTCTAACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000010001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000001000000
....................................................ACAGTATCGTCTAACGTTAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000001000000000000000000000000000000000000
..TAACAGTGGAAG------------AA---C---AAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000010000000000000002001000000000000000000000000000000000
....................................................ACAGTATCGTCTAACGTTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...................................AAGAAGCG---------ACAGTATCGTCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................AA---C---AAGAAGCG---------ACAGTATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GTCCCCAGAGTT----AACGCTAGC.....................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGCTGAAT---------------------------------C----------------------------GCCCGAGGTTAA-................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............AG------------AA---C---AAGAAGCG---------ACAGTATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000020000000000000000000000000
..........GAAG------------AA---C---AAGAAGCG---------ACAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000
.........................................CG---------ACAGTATCGTCTAACGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTAACAGTGGAAG------------AA---C---AAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000010000000000000000000000000
...................................AAGAAGCG---------ACAGTATCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................AAGAAGCG---------ACAGTATCGTCTAACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGAAGCG---------ACAGTATCGTCTAACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAAGTTACATGCGT---GCA................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......AGTGGAAG------------AA---C---AAGAAGCG---------ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGTT----AACGCTAGCC----AT------------------------TGAAT.................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................A---C---AAGAAGCG---------ACAGTATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.........................................................................................................................................................................................................................CGTCGTTCTT-A------TTTTGTAC--TT..................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................ACTTGTCCCCAGAGTT----AACGC.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
..........GAAG------------AA---C---AAGAAGCG---------ACAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................C-----TTTCGGATCCGTCGTTCTT-A------..............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......AGTGGAAG------------AA---C---AAGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAGAAGCG---------ACAGTATCGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000
..TAACAGTGGAAG------------AA---C---AAGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000
........................................................................TTTAGGTAAGTTGCGCG-------C----------ATTC..........................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................C--TTGCTGAAT---------------------------------C----------------------------GCCCGAGGTT...................................................................................................................................................................................2112.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGTGGAAG------------AA---C---AAGAAGCG---------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAACAGTGGAAG------------AA---C---AAGAAGCG---------ACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGCGGT-C-------GCCAGTGTTGG............................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
GTTAACAGTGGAAG------------AA---C---AAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................CG-------C----------ATTCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCC...............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TT-A------TTTTGTAC--TTGCTGAAT---------------------------------C----------------------------.............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATGGTTGGTTAAACACTTGTC...........................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000
.....................................................CAGTATCGTCTAACGTTAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTGCTGAAT---------------------------------C----------------------------GCCCGAGGTTA..................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................TTCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCG...........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTTTGTAC--TTGCTGAAT---------------------------------C----------------------------GCC..........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CGAGGTTAA-ATGGTTGGTT......................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.......GTGGAAG------------AA---C---AAGAAGCG---------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGGAAG------------AA---C---AAGAAGCG---------ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................TAATTTAGGTAAGTTGCGCG-------C----------A.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGTCTGTTAGGTCAGCT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CCAGAGTT----AACGCTAGCC----AT------------------------TGA...................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................................AGTATCGTCTAACGTTAATTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.TTAACAGTGGAAG------------AA---C---AAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTTGGGAAGCGTCTGT.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCTGTTAGGTCAGCTGA.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTAGGTAAGTTGCGCG-------C----------ATTCC.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTGTAC--TTGCTGAAT---------------------------------C----------------------------GCCCG........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................CCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTT.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAACAGTGGAAG------------AA---C---AAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGGT-C-------GCCAGTGTTGGGAAGCG......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.TTAACAGTGGAAG------------AA---C---AAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................TTGCGCG-------C----------ATTCCTC----------------------------------------------------------------------------------------C-----TTTCG....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.........GGAAG------------AA---C---AAGAAGCG---------ACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................C-------GCCAGTGTTGGGAAGCGTCT...................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GAGTT----AACGCTAGCC----AT------------------------TGA...................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGGTTGGTTAAACACTTGTCC..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGTTACATGCGT---GCAGG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCGGT-C-------GCCAGTGTTGGG...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............G------------AA---C---AAGAAGCG---------ACAGTATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTTACATGCGT---GCAGGC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GAAG------------AA---C---AAGAAGCG---------ACAGTAATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTAACAGTGGAAG------------AA---C---AAGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.TTAACAGTGGAAG------------AA---C---AAGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGT-C-------GCCAGTGTTGGGA..........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GTTAA-ATGGTTGGTTAAA...................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................T------------------------TGAATTTTGTTGTAAGCGCGG.................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TCTT-A------TTTTGTAC--TTGCTGAA............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................AGCG---------ACAGTATCGTCTAACGTTAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCGGT-C-------GCCAGTGTTGGGA..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACACTTGTCCCCAGAGTT----AACG..........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....ACAGTGGAAG------------AA---C---AAGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......AGTGGAAG------------AA---C---AAGAAGCG---------ACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCGT---GCAGGTAAAACAT----..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...AACAGTGGAAG------------AA---C---AAGAAGCG---------ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GTAAGTTGCGCG-------C----------ATTCCTC----------------------------------------------------------------------------------------C-----.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................AAGAAGCG---------ACAGTATCGTCTAACGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GAGTT----AACGCTAGCC----AT------------------------TGAA..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AC--TTGCTGAAT---------------------------------C----------------------------GCCCGAGGTT...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAGCGCGGT-C-------GCCAGTGTTGGGA..........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTGGGAAGCGTCTGTTA...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................G---------ACAGTATCGTCTAACGTTAATTTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTGTTGGGAAGCGTCTGTTAGG.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................TAC--TTGCTGAAT---------------------------------C----------------------------GCCCGAGG.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTACATGCGT---GCAGGTAAA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGGT-C-------GCCAGTGTTGGGAAG........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.TTAACAGTGGAAG------------AA---C---AAGAAGCG---------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAGCG---------ACAGTATCGTCTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............AG------------AA---C---AAGAAGCG---------ACAGTATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................A---C---AAGAAGCG---------ACAGTATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................C----AT------------------------TGAATTTTGTTGTAAGCG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGCG-------C----------ATTCCTC----------------------------------------------------------------------------------------C-----TTTCGGAT.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATGGTTGGTTAAACACTTGT............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAGTGGAAG------------AA---C---AAGAAGCG---------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................T---------------------------------C----------------------------GCCCGAGGTTAA-ATGGTTGG........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................TTAATTTAGGTAAGTTGCGCG-------.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTTACATGCGT---GCAGGT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................CG---------ACAGTATCGTCTAACGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T----AACGCTAGCC----AT------------------------TGAATTTTG.............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................G---------ACAGTATCGTCTAACGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................TAATTTAGGTAAGTTGCGCG-------.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AACGCTAGCC----AT------------------------TGAATTTTGT............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................A---C---AAGAAGCG---------ACAGTATCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGT-C-------GCCAGTGTTGGGAA.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................GTAC--TTGCTGAAT---------------------------------C----------------------------GCCCGAG......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAGCG---------ACAGTATCGTCTAACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AACAGTGGAAG------------AA---C---AAGAAGCG---------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................AGTT----AACGCTAGCC----AT------------------------TGAATT................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCTGAAT---------------------------------C----------------------------GCCCGAGGTTAA-AA..............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGAAGCGTCTGTTAGGT............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........AAG------------AA---C---AAGAAGCG---------ACAGTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TAA-ATGGTTGGTTAAACACTT..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGAAT---------------------------------C----------------------------GCCCGAGGTTAA-ATGGTTGG........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGTTGTAAGCGCGGT-C-------GCCAGT.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCGCGGT-C-------GCCAGTGTT..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGTAAGCGCGGT-C-------GC.....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................TTAA-ATGGTTGGTTAAACACT...............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......AGTGGAAG------------AA---C---AAGAAGCG---------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAGAAGCG---------ACAGTATCGTCTAACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGT-C-------GCCAGTGTTGGGAAGC.......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CTGAAT---------------------------------C----------------------------GCCCGAGGTTAA-AT..............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGGAAG------------AA---C---AAGAAGCG---------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................AATTTAGGTAAGTTGCGCG-------C----------A.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AACAGTGGAAG------------AA---C---AAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................CGAGGTTAA-ATGGTTGGTTAA....................................................................................................................................................................2111.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................T----AACGCTAGCC----AT------------------------TGAATTTTGTTGTA........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................A---C---AAGAAGCG---------ACAGTATCGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................A---C---AAGAAGCG---------ACAGTATCGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............G------------AA---C---AAGAAGCG---------ACAGTATCGTCTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................C----------ATTCCTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGT..........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AATTTAGGTAAGTTGCGCG-------C----------AA............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....CAGTGGAAG------------AA---C---AAGAAGCG---------AATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................CTC----------------------------------------------------------------------------------------C-----TTTCGGATCCGTCGTTC........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GTTAATTTAGGTAAGTTGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAACAGTGGAAG------------AA---C---AAGAAGCG---------ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCATCTAACGTTTATTTAGGTAAGTTGCG---------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTTAGATTCGTTGTTCTT-T------TTTTGTAC--TTGCTGAAT---------------------------------C----------------------------GCCCAAGGTTAA-ATGCTT-------TACTTGGCCCGAGAGTT----TTCGCAAGCC----AG------------------------TG-ATTTTTTTGTAAGCGCGGG-C-------GCCAGTGTTGCGAAGCAGTCGTTGGGTCAGCTGATAAAGTTACATGCGC---GCAGGTAAAACAG----CGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
GTTAACAGTGGAAG------------AG---C---AA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
GTTAACAGTGGAAG------------AG---C---AAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
GTTAACAGTGGAAG------------AG---C---A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
...........................G---C---AAGAAGCG---------ACAGTATCATCTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
droYak3
GTTAACAGTGGAAG------------AG---C---AAGAAGCG---------ACAGTATCGTCTAACGTTTATTTAGGTAAGTTGCG---------C----------AGCCCTC----------------------------------------------------------------------------------------C-----TTTCGGAC---TAGTTCTC-T------TATTGTAC--GTGCGGAAT---------------------------------C----------------------------GACCAAGGTTAA-AGGGTT-------TACTTGGCCCGAGAGTTAGTCTACGCAGGCC----AG------------------------TG-ATTTTTTTGTAAGCGCGGG-C-------GCCAGTGTTGCAAAGCGGTCGTTCGATCAGCTGATAAAGTTACATGCGC---GCAGGTAAAACAG----CGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
GTTAACAGTGGAAG------------AG---C---AAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
...................................AAGAAGCG---------ACAGTATCGTCTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................................................................................................................................................................................................................................................TGCGGAAT---------------------------------C----------------------------GACCAAGGTTAA-A...............................................................................................................................................................................2211.00101000000000
GTTAACAGTGGAAG------------AG---C---AA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.TTAACAGTGGAAG------------AG---C---AAGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............AG------------AG---C---AAGAAGCG---------ACAGTATCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEug1
GTTAACAGTGGAAG------------TG---C---AAGAAGCG------GACGTAGTATCGTCTAACGTTAATTTAGGTAAGTTGCT---------C----------AGCTC-C----------------------------------------------------------------------------------------CGCTCTTTTCGATTCCAT-GT--------------------------------------------------------------------------TGATTCCGCAGTGGCGGCAGTCCAAGGTTACAATGGTT-------TACTTGTCCCGAAAGTT----TCCGCTAGCC----CG------------------------TG-TTTTTGTTGTAAGCGCGGA-C-------GTCAGTGTTGCAAAGCGGC-GTTTGGTCAGCTGATAAAGTTACATGCGCAG-GCAGGTAAAGCGATAATCGSizeHit CountTotal NormTotal
No Reads
droBia1
GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACGTTAATTTAGGTAAGTTGCGCG-----CT--------CC-AGCCCTC----------------------------------------------------------------------------------------C------------------GCTCTT-C------TTTC--------GCCCCGC---------------------------------C----------------------------ACCCAAGGTTAC-TTTGCT--CGGTTTGCTTGGCCCG-AAGTC----TGCGCCAGCC----CG------------------------TG-TTTTTGTGGTAAGCGCGAG-C-------GCCAGTGTTGCACAGCGACCGCTGCGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAAAGCGG----CGSizeHit CountTotal NormTotal
No Reads
droTak1
GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACGTTAATTTAGGTAAGATGCG---------C----------AGCCCTC----------------------------------------------------------------------------------------C-----GCTC-------------TTCATTTTCGCCTTGCTG--TGGCCGAGC---------------------------------C----------------------------GCCCAAGGTTAC-AAGGTT--TAATTTACTTGGCCCGAAAGTT----TCCGCTAGCA----AG------------------------AG-TTTTTGTTGTAAGCGCGGT-T-------GCCAGTGTTGCAAAGCGGTGGCCGGGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAAAACGG----CASizeHit CountTotal NormTotal
No Reads
droEle1
GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACGTTAATTTAGGTAAGTTGCG---------C----------AGCTTTT--------------------------------------------------------------------------------------------------------------CTC-A------ATTTATACGCTTGC--------------------------------------T----------------------------AACCAAGGTTAC-ATGGTT-------TACTTAGCCCGAAAGTT----TCCGCTCGCC----AG------------------------TG-TTTTTGTTGTAAGCGCGGG-C-------AACAGTGTTGCAAAGCGGCCGTTGGGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAAATC--------SizeHit CountTotal NormTotal
No Reads
droRho1
GTTAACAGTGGAAG------------TG---C---AAGAAGCG---------GCAGTATCGTCTAACATTAATTTAGGTAAGTTGCCC-C-----------------TGCTTGC--------------------------------------------------------------------------------------------------------------CTC-A------TTTTGT----TCGCTGTGC---------------------------------C----------------------------AACCAAGGTTAT-ATGGTT-------TACTTAGCCCGAAAGTT----TCCGATCGTA----AG------------------------TG-TTTTTGTTGTAAGCGCGGG-C-------GCCAGTGTTCCAAAGCGCCCGTCTTGTCAGCTGATAAAGTTACATGCGCAGGGCAGGTAATTCGG----CASizeHit CountTotal NormTotal
No Reads
droFic1
GTTAACAGTGGAAG------------TG---C---AAGAAGCA---------GCAGTATCGTCTAACGTTAATTTAGGTAAGCT---------------------------TTC----------------------------------------------------------------------------------------C-----TAT---------TGTT----ATTT---TCGTTGAT--TTGCTGTGC---------------------------------C----------------------------GCCCAAGGTTAC-ACGGTT-------TACTTAACCCGAAAGTT----TCCGCTCGTCCCGCAA------------------------TGGTTTTTGTTGTAAGCGCGAG-C-------GCCAGTGTTGCAAAGCGGTTGTTGGGTCAGCTGATAAAGTTACATGCGCCGGGCAGGTAAAACGA----C-SizeHit CountTotal NormTotal
No Reads
droAna3
GTCAACCGTGGAAG------------TGGCAGTGCAAGAAGCG---------GCAGTATCATCTAACATTAATTTAGGTAAATAAATG-GTGTAAGCA--GCAA--G--CTTTT------------------T--CATG----------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------GTCCAAGGTTGC-ATTGTTA----------------TAAAGTT----TCCGTTCGCC----ATTGGGAGCGGAGCGGGAGCTCTGTGGG-TGTTTGTTGTAAATGG-CT-A-------GCCAGTGTTGGTAAGCGTCCGTCGGGTCAGCTGATAAAGTTACATGCGCAGGCCAGGTAAACCA-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGG-CT-A-------GCCAGTGTTGGTAAGC.......................................................2711.001010000
......................................................................................................................................................................................................................................................................................................................................GC-ATTGTTA----------------TAAAGTT----TCCGTTCGCC----................................................................................................................................2611.001100000
............AG------------TGGCAGTGCAAGAAGCG---------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
GTCAACCGTGGAAG------------TGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.................................GCAAGAAGCG---------GCAGTATCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..............................................................................................................................................................................................................................................................................................................................................................................GTTCGCC----ATTGGGAGCGGAGC..................................................................................................................2111.001000010
............AG------------TGGCAGTGCAAGAAGCG---------GCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................................................................................................................................................CC----ATTGGGAGCGGAGCGGGAG.............................................................................................................2111.001100000
...............................GTGCAAGAAGCG---------GCAGTATCATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
droBip1
GTCAACCGTGGAAG------------TGGCAGTGCAAGAAGCG---------GCAGTATCATCTAACGTTAATTTAGGTAAATAAATA-GTGTAAGC-----AA--G--CTTTT------------------T--CATG----------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------GTCCAAGGTTGT-ATTGTTA----------------TAAAGTT----T-CGTTCGCC----AG------TTGTGGT----CTCTATGGG-TTTTTGTTGTAAATGG-CT-A-------GCCAGTGTTGGAAAGCGTCCATCGGGTCAGCTGATAAAGTTACATGCGCAGGCCAGGTAAACCA-------SizeHit CountTotal NormTotal
No Reads
dp5
ATTAACAGTGGAAG------------TG---G---AAGAAGGC---------GCACTATCATCTAACGTTAATTTAGGTAAGTCGAG--GTAGAGGCA--GAAG--A-------------------------------------------------------------------------------------------------------------------------------------------GG-----TTTTGTTGTT-------------------------------------------------------CCAAGGCTAT-TTTG--------------------------------CCATCGC----------GACCAAAACTACA----CTCGAG-TGTTTGTTGTAAGCGCCGTTAGCATAAGAGTAGTGTTGAAAAGCTCCCGCCTGGTCAGCTGATAAAGTTACATACGC-----ACGTAAAATA------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........GGAAG------------TG---G---AAGAAGGC---------GCACTATCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....CAGTGGAAG------------TG---G---AAGAAGGC---------GCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..TAACAGTGGAAG------------TG---G---AAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
droPer2
ATTAACAGTGGAAG------------TG---G---AAGAAGGC---------GAACTATCATCTAACGTTAATTTAGGTAAGTCGAG--GTAGAGGCA--GAAG--T-------------------------------------------------------------------------------------------------------------------------------------------GG-----TTTTGTTGTT-------------------------------------------------------CCAAGGCTAT-TTTG--------------------------------CCTTCGC----------GACCAAAACTACA----CACGAG-TGTTTGTTGTAAGCGCCGTTAGCATCAGAGTAGTGTTGAAAAGCTCCCGCCTGGTCAGCTGATAAAGTTACATACGC-----ACGTAAAATA------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
ATTAACAGTGGAAG------------TG---G---A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.......GTGGAAG------------TG---G---AAGAAGGC---------GAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droWil2
ATTCAAAGTGGAAGTGGACGGAGAAGAAGAAGTAAAAGGAGCA---------GCAGTATCATCTAACATTATTTTAGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......AGTGGAAGTGGACGGAGAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................................AAGGAGCA---------GCAGTATCATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................GAAGAAGAAGTAAAAGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..TCAAAGTGGAAGTGGACGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
....................................AGGAGCA---------GCAGTATCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................AGTAAAAGGAGCA---------GCAGTATCATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
................................TAAAAGGAGCA---------GCAGTATCATCTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........................GAAGAAGTAAAAGGAGCA---------GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................GTAAAAGGAGCA---------GCAGTATCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.............................AAGTAAAAGGAGCA---------GCAGTATCATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...CAAAGTGGAAGTGGACGGAGAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
droVir3
ATTAACAGTGGCAG------------AAGAGG---AAGAAGCA------GCAGCATTATCATCCAACGTTCATTTAGGTAAGTATTG-----TAAAC-----AAC--CGCCACCCCTTCAGCCCTCACAGTTCCATCTAGT------------------------------------------------TGCTATTGGCTTAAG--------------------------------------C--TCG-----CTTTTCCGTTTCAAGGCTAGCTCTG-ACGCTAATTGGCCAATGTTGAATTCGC-------------------------------------------------------------------------------------------------TGCAATTTGTTGTAAACGAA-----------TTCAGTGTTGCAAAACATCCATT-GGTCAGCTGATGAAGTTACATACAT----------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......GTGGCAG------------AAGAGG---AAGAAGCA------GCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................GCATTATCATCCAACGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................A------GCAGCATTATCATCCAACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
droMoj3
AGTAACAGTGGCAG------------AAGAGG---AAGAAGCA------GCAGCATTATCATCCATCGTTCATTTAGGTAAGTGTACT-GTAAAAT--------CC-AACA--ACGTTCAGCATTCGCAGTCAAACACAGG-------TCATAG----GTTTATTTGTTGCTTA----------------------------AG--------------------------------------T--TTG-----CT-----G-TTCAAGGCTAGCCCTAAACGCTAATTGGCCATAGTCGAAATCGC-------------------------------------------------------------------------------------------------TGTGTTTTGTTGTAAGCGAA-----------ATCAGTGTTGCAAATCGTAAAT-TGGTCAGCTGATGAAGTTACACATAT---ATATGTA------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTAACAGTGGAAG------------AGGAAG---AAGAAGCAGCACCAGCAGCATTATCATCCAACGTTCATTTAGGTAAGTGAATA-GTCAAATATTTTTAA--A--TTTCT------------------TCATCTAGTCTATTAGTTGTAGTCTAGTCTATTAGTTGTTTATGTTGCTGCTGCTGCTGCTAAAAGCTAAAG------------------CTCTT-T---------------------------------TTCAAGGCTAGCCCTGAACGCTAATTGGCCAAAGTTGAATTCGC------------------------------------------------------------AGCCGCA----GC------------------------AGCATTTTGTTGTAAGCGAA-----------AACAGTGTTGCCAAACGGCACATTGGTCAGCTGATGAAGTTACACACAT----------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................TTGTTTATGTTGCTGCTGC...............................................................................................................................................................................................................................................................................................................................1911.00110
......AGTGGAAG------------AGGAAG---AAGAAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101

Generated: 05/18/2015 at 12:26 PM