ID:

dsi_19287

 Coordinate:

x:8541258-8541407 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.1 -22.0 -21.7 -21.6

Flybase annnotation

exon [x_8541113_8541257_-]; CDS [x_8541113_8541257_-]; intron [x_8541258_8541656_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTAACAATTGTAGCTTTGAAAACAGCTTATTAAACAATTAACTATATATAATTTGATAACCATGGATGAAGAATATTGAAAAAGATCGATAAAGAGGGTGTTACTATTTAAGTCCAAAACCCAAGTTTATGTTTTAGATCGGTTTGCATCCAGTGACTGCACGATTGACTTATGATTTCTACCGTTTATTACGCATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
**************************************************..((.........((((((.((((..........(((((.......((((((.((((((((((....((((....))))....))))))).)))..))))))..........)))))..........))))..)))))).........))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
...AACAATTGTAGCTTTGAAAACAGC............................................................................................................................................................................................................................... 24 0 1 4.00 4 3 0 1 0 0 0 0
......................................................................................................................................................................................................AGTTCGCCGACCTGTCGCGC................................ 20 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................................TTAATGTTTTAGATCGGTTTGCATCCAG................................................................................................ 28 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................TTTGCATCCAGTGACTGCA........................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0
.......................................................................................................................................................CAGTGACTGCACGATTGACTT.............................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................................................ATCGGTTTGCATCCAGTGACT........................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0
.............................................................................................................................................................CTGCACGATTGACTTATGATTTCTACC.................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................TTCTACCGTTTATTACGCATCAGTT................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0
ATTAACAATTGTAGCTTTGAAAACAGC............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................GCCTCCGATAACGAACTCAT... 20 0 1 1.00 1 0 1 0 0 0 0 0
...AACAATTGTAGCTTTGAAAAC.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0
......AATTGTAGCTTTGAAAAC.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................GCTGAAGAAGATTGAAAAAGAC................................................................................................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0
.......................................................................................CGATAAAGAGGGTGA.................................................................................................................................................... 15 1 11 0.18 2 0 0 0 0 0 2 0
................................................................CGCTGAAGAAGATTGAAAAAG..................................................................................................................................................................... 21 3 8 0.13 1 0 1 0 0 0 0 0
..........................................................................................................................................................TGACTGTACCATTGACT............................................................................... 17 2 14 0.07 1 0 0 0 0 0 1 0
..............................................................ATGGCTGAAGAATATGGTAA........................................................................................................................................................................ 20 3 15 0.07 1 0 0 0 0 0 0 1
.......................................................................................CGATAAAGAGGGTGAGA.................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

TAATTGTTAACATCGAAACTTTTGTCGAATAATTTGTTAATTGATATATATTAAACTATTGGTACCTACTTCTTATAACTTTTTCTAGCTATTTCTCCCACAATGATAAATTCAGGTTTTGGGTTCAAATACAAAATCTAGCCAAACGTAGGTCACTGACGTGCTAACTGAATACTAAAGATGGCAAATAATGCGTAGTCAAGCGGCTGGACAGCGCGAAGATATAGCGGAGGCTATTGCTTGAGTACTA
**************************************************..((.........((((((.((((..........(((((.......((((((.((((((((((....((((....))))....))))))).)))..))))))..........)))))..........))))..)))))).........))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
...........................................................................................................................................................................................ACAATGAGTGGTCAAGCGG............................................ 19 3 13 0.54 7 6 1 0 0
..................................................................................TGCTAGCTATTTCAACCACA.................................................................................................................................................... 20 3 9 0.22 2 0 2 0 0
.............................TAATTTGTTAAGAGATAAATAT....................................................................................................................................................................................................... 22 3 9 0.11 1 0 0 1 0
............................................................................................................................................................................................TTATGGGTAGTCAAGAGGC........................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8541208-8541457 - dsi_19287 ATTAACAATT--GTAGCT-TTGAAAACAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------TT--------------A--------------------ACTATA-----------------------------------------------------------------------------------------------------------------------TATA-ATTTGATAACCATGGATGAAGA---------------------------------ATATTGAAAAAGATCG-------------------------ATAAAGAG------------------GGTGTTACTATTTAAGTC--------CAAAACCCAAGTTTATG----------------T--T---T---TAGATCGGTTTGCATCC--AGTGAC-TGCA--------CGATTGACTTATGATT----------------TCTACCGTT----TATTAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droSec2 scaffold_34:354580-354855 - ATTAACAATT--GTAGCT-TTGAAAACAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------TT--------------A--------------------ACTATACTCTT-------------TT-----------------------------------------------------------------------------------------GGAAAATACATAGCAATTCGCTAACCCTAGATGAAGA---------------------------------ATATTGAAAAGGATCG-------------------------ATAAAGAG------------------GGTGTTACTATTGAAGTTATTGTACACAAAACCCAAGTTTATG----------------T--T---G---TAGATCGGTTTGCATCC--AGTGAC-TGCA--------CGATTGACTTATGATT----------------TCTACCGTT----TATTAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
dm3 chrX:8994641-8994920 - ATTAACAATT--GTAGCT-TTGAGAAAAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------TT--------------A--------------------ACTATACTCTT-------------TTAGCTT------------------------------------------------------------------------------------GGAAAATACATAGAATTGCGCTAAGCCTGGATAAATC---------------------------------ATATTGAAAAAGTTCG-------------------------ATAAAGAG------------------GGTGTTACTATTCAAGTCATTGTAGA-GAAACCCAAGTTTATG----------------T--T---A---TAGATCGATTTGCATCC--ATTGAC-TGCA--------AGATTGACTTATGATT----------------TCTATCGTT----TATTAC-----G----CATCAGTTTGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droEre2 scaffold_4690:6122822-6123137 + ATTAACAATT--GTAGCT-TTGAAAACAGCTTATTAAACAAACGTATTAAACAAG-------------CTTATCAA----------------------------------------------------------------------------AT--------------AATAT--------------------TCCTCTTTAGCCAAACCTTTTTAGCTC----------------------------------------------------------------------------GGAGACTTG----AGAC-TAGAAATTCACTAACCCC-GATGAATA---------------------------------ATATTAAAAAAGAGCG-------------------------A-AAAGAG------------------GGTGAAGCTATTCAAGTCATTGTACA-CTATCCAAAGTTTATG----------------C--A---G---TAGATCGGTTTGCATCC--TGTGAC-TCCA--------AGATTGACTTATGATT----------------TCTACCGTT----TATTAT-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droYak3 X:12321686-12321996 + ATTAACAAGT--GTAGCTTTTGAAAACAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------AT--------------AATATGGAATATAAGTTATGAACTGTACTCTTTGGCAAGACTTATTTAGTTT----------------------------------------------------------------------------AGAGACTTGTAAAGTGCA-----------TAATCCCGAATGAATA---------------------------------GTACTTAAAAAGAGCG-------------------------AAAAAGAG------------------GGTAAAACTATTCAAGTGATTGTATG-ATATCCCAGGTTAATG----------------T--A---G---TAGATCGGTTTGCATCC--TGCGAC-TCCA--------CGATTGACTTATGATT----------------TCTACCGTT----TATTAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droEug1 scf7180000409631:406464-406723 - AGTAACCCCT--TTAACT-TTGATAATATTTTAAGGA-------------------------------TTTATTAAGTAAT-----------A---------------------CAGAGGTTTAACTATGATTAAGCTGTGTGAAAAT----TTAAAAAT-----------------------------TCTAAACTTTT-------------TTAA------------------------------------------------------------------------------------------AAATAT------------------------AATA---------------------------------ATATTTAATAATA----------------------------------------------------TATAAATTA-------------------C------------CAAA----------------T--A---G---TAGATCGTTTTGCATCC--CTGTAC-TTGA--------TGATTGACTTATGATT----------------TCTACTGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droBia1 scf7180000301760:4593541-4593784 - ATCGAGTATT--AT--------------------TTAATAT--------------TTCCATAG---CC-------AGTAACTGATTTGACTTAATTTAAATTGAATTTTTCTTG-------------------------G-TTTTTAAG---TTAA-AATAAATGG--------------------------------------------------------------------------------------------------------------------------------------ATTTG----AATC------------------------------------------------------TATT--------------------------------GTG----------------------------------------------------------ATA-TTAACTGAAGTTCA-------------------GCTAGAG---CCGATCGGCTTGCATCC--CCGCAC-TCGA--------TGATTGACTTATGATT----------------TCTACCGTT----TA-TAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droTak1 scf7180000415843:771010-771123 + A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGGTTTGCATCC--CTGTTC-TTGA--------CGATTGACTTATGATT----------------TCTACCGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droEle1 scf7180000491006:2511019-2511219 - ATTAACAATAATATAAC---TTAAAACGACTTGCTAAATTA---------------------------------------------------------------------------------------------------------------TG--------------AATATTGATTATAA--------------------------------------------ACAATATCAAATTATGA-TTGG---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT----------------T--A---G---TAGATCGGTTTGCATTC--CTGTAT-TTTA--------TGATTGATTTATGATT----------------TCTACCGTT----TATCAC-----GTTATCATCAGTTTGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droRho1 scf7180000779841:520256-520597 - AATAACAATTATGTAAC---TTAAATCGGCTTATTTAACAA---------------------------------------------------------------------------------------------------------------TT--------------AATAGTGATCATAT------------------------------------------------------------A-TTGG---TATAACAACTTCTTTAATAATGTTTTAGCAAATTTAAAATACTTTA-------------------------------------TAGACGAATATTAACGATTGTTTGTTAACGTATAATTGTTGTATTTAAATATTGCTTAAAACTAAACATGAGATAGTATCTAAAGTGAGTGCGTCCAGAGTTATACTTGTGTTAC-------------------------------TAAG----------------C--G---G---TAGATCGGTTTGCATTC--CTGTAT-TCTA--------TGATTGACTTATGATT----------------TCTACCGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droFic1 scf7180000453829:962909-963108 - TTCAAGAAGGAA---ACT-ACAAATTAAAAAT---GTATTT----------------------TGTAT--------------------------------------------------------------------------GTTCAAAGAA-----------------CATTTAA--------------------------------------------AACAT----------G------------GTTT--------------------------------------------------------------------------------AATAGTCGAATATTA----------------------------------------------------------------------------------------------------------------------------------------A----------------T--T---G---TCGATCGGCTTGCATCC--GAGTAC-CTAA--------TGATTGACTTATGATT----------------TCTACCGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAGCTAATGAT
droKik1 scf7180000301542:55697-55918 - TTT------------------GATATCAGCTG-----------------------------------------------------------------------------------------------------------CATAAAAAAA---TTAA-AATAAATAATAA--------------------ATTGCAAAATT-------------TTAATTATTAAAAATAATAT----------------------------------------------------------------------------------------------------------TT---------------------------------AT--------------------------------------------------------------------------------------------AATTAAAAAGTTTAGC----------------A--A---C---TTTATTGGTTTGCATCCTCCAGAAACTTATTGA-------AATGACTTATGATTTATATT--------------ACGTT--TATATCACGCCGTT----TATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droAna3 scaffold_13047:805860-806073 - T-------------CACT-TTGAACTGAGTTC----------------------------------GT--------------------------------------------------------------------------GTCAAAATTG-----------------CAATTGA--------------------------------------------TTAAT----------G------------TCCT--------------------------------------------------------------------------------AGTTGACGA---------------------------------ATC----------------------------------------------------------------------T-------------------C------------CATATAGTAGCTCTTATGCA-GTTATAG---ATATTCTATTTGCAACC--CTGATC-CT-TTGAATTTATAGTTGATTTAT-------ACCCCGTTTGATTTATACCGT---------AT-----G----TATTAGTTCGCCGACCTGTCGCGCTTCTATATCGCATCCGATAACGAACTCATGAT
droBip1 scf7180000396431:590264-590492 - TTTTT----------------GA----------TTAAATAT-------------------------CT-------AGCA-------------------------------------------------------------------ATATGA-----------------TTATTGA--------------------------------------------TTGAT----------GATTATGAT----TTAT--------------------------------------------------------------------------------ATTTGACGT------------------------ATTATTG--------------------------AGC----------------------------------------------T-------------------C------------AAAATAGTATCTCTTATGCA-GTTATAGATATCCTTCCGTTTGCAACC--CTGATC-CT-TTGAATTTATAGTTGACTTAT-------TCCTCGTTTGATTTATACCA---------TAT-----G----TATTAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
dp5 XL_group1e:6989083-6989152 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTA----TGATGT-----G----CATCAGTTTGCCGACTTGTCGCGCTTCTATATAGCCTCCGATAACGAACTCATGAT
droPer2 scaffold_13:1566421-1566490 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTA----TGATGT-----G----CATCAGTTTGCCGACTTGTCGCGCTTCTATATAGCCTCCGATAACGAACTCATGAT
droWil2 scf2_1100000004590:2064480-2064543 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TGTTTT-----G----CATCAGTTTGTCGACTTGTCACGCTTCTATATTGCCTCCGATAATGAACTTATGAT
droMoj3 scaffold_6473:13332880-13332963 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGATT----------------ATTATTATTATTGTATTAC-----G----CATTAGTTTGTCGACTTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT
droGri2 scaffold_15203:317324-317406 - TATTACTT----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT----------------ATTATTG------TATTAT-----G----CATTAGTTTGTCGACTTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTAACAATT--GTAGCT-TTGAAAACAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------TT--------------A--------------------ACTATA-----------------------------------------------------------------------------------------------------------------------TATA-ATTTGATAACCATGGATGAAGA---------------------------------ATATTGAAAAAGATCG-------------------------ATAAAGAG------------------GGTGTTACTATTTAAGTC--------CAAAACCCAAGTTTATG----------------T--T---T---TAGATCGGTTTGCATCC--AGTGAC-TGCA--------CGATTGACTTATGATT----------------TCTACCGTT----TATTAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...AACAATT--GTAGCT-TTGAAAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00400310000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGCCGACCTGTCGCGC................................2012.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCATCC--AGTGAC-TGCA--------.....................................................................................................................1911.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AGTGAC-TGCA--------CGATTGACTT...........................................................................................................2111.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTTTGCATCC--AGTGAC-T................................................................................................................................2111.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TGCA--------CGATTGACTTATGATT----------------TCTACC...............................................................................2711.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------TCTACCGTT----TATTAC-----G----CATCAGTT................................................2511.00100010000000000000
ATTAACAATT--GTAGCT-TTGAAAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCCGATAACGAACTCAT...2011.00101000000000000000
...AACAATT--GTAGCT-TTGAAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
......AATT--GTAGCT-TTGAAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CG-------------------------ATAAAGAG------------------GGTGA............................................................................................................................................................................................................................15110.18200000000020000000
droSec2
ATTAACAATT--GTAGCT-TTGAAAACAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------TT--------------A--------------------ACTATACTCTT-------------TT-----------------------------------------------------------------------------------------GGAAAATACATAGCAATTCGCTAACCCTAGATGAAGA---------------------------------ATATTGAAAAGGATCG-------------------------ATAAAGAG------------------GGTGTTACTATTGAAGTTATTGTACACAAAACCCAAGTTTATG----------------T--T---G---TAGATCGGTTTGCATCC--AGTGAC-TGCA--------CGATTGACTTATGATT----------------TCTACCGTT----TATTAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................A---------------------------------ATATTGAAAAGGATCG-------------------------ATAAAGAG------------------GGT..............................................................................................................................................................................................................................2811.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................ATCG-------------------------ATAAAGAG------------------GGTGTTACT........................................................................................................................................................................................................................2111.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCCGACCTGTCGCGCTT..............................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................A---------------------------------ATATTGAAAAGGATCG-------------------------ATA........................................................................................................................................................................................................................................................2011.0010100
dm3
ATTAACAATT--GTAGCT-TTGAGAAAAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------TT--------------A--------------------ACTATACTCTT-------------TTAGCTT------------------------------------------------------------------------------------GGAAAATACATAGAATTGCGCTAAGCCTGGATAAATC---------------------------------ATATTGAAAAAGTTCG-------------------------ATAAAGAG------------------GGTGTTACTATTCAAGTCATTGTAGA-GAAACCCAAGTTTATG----------------T--T---A---TAGATCGATTTGCATCC--ATTGAC-TGCA--------AGATTGACTTATGATT----------------TCTATCGTT----TATTAC-----G----CATCAGTTTGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................TAGAATTGCGCTAAGCCTGGA...........................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGTTTGCCGACCTGTCGCGCT...............................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------T--T---A---TAGATCGATTTGCATCC--AT......................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAC-TGCA--------AGATTGACTTATGA.......................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TACATAGAATTGCGCTAAGCCTGGA...........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAC-----G----CATCAGTTTGCCGAC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTCATTGTAGA-GAAACCCAAGTTT.........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--T---A---TAGATCGATTTGCATCC--........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................AAAAAGTTCG-------------------------ATAAAGAG------------------GG...............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATG----------------T--T---A---TAGATCGATTTGCATCC--AT......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ATTGAC-TGCA--------AGATTGACTT...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTATATCGCCTCCGATAACGAAC.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAG------------------GGTGTTACTATTCAAGT................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATATCGCCTCCGATAACGAACTC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TAGAATTGCGCTAAGCCTGGATA.........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATTCAAGTCATTGTAGA-GAAACCCAA.............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGCCTGGATAAATC---------------------------------ATATTGA.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAC-TGCA--------AGATTGACTTATGATT----------------.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCCGACCTGTCGCG.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TAGAATTGCGCTAAGCCTGGATAAA.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCG-------------------------ATAAAGAG------------------GGTGT............................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACTTATGATT----------------TCTATCGT.............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGATAACGAACTCATGAT2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTGCGCTAAGCCTGGATAAATC---------------------------------ATA.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................AAAATACATAGAATTGCGCTA...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTTGCATCC--ATTGAC-TGCT--------.....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGATT----------------TCTATCGTT----TATTAC-----G----CA......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGA-GAAACCCAAGTTTATG----------------T--...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAACAATT--GTAGCT-TTGAGAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCCGATAACGAACTCATG..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC--ATTGAC-TGCA--------AGATTGACC............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCG-------------------------ATAAAGAG------------------GGTGTTACTATTCAAG.................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--T---A---TAGATCGATTTGCATCC--A.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCAAGTTTATG----------------T--T---A---TAGAT......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTGAAAAAGTTCG-------------------------ATAAAGAG------------------GGTGTA...........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAG------------------GGTGTTACTATTCAAGTCAT.............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................C---------------------------------ATATTGAAAAAGTTCG-------------------------ATAAAGAG------------------GGT..............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCG-------------------------ATAAAGAG------------------GGTGTTAC.........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GCTAAGCCTGGATAAATC---------------------------------ATA.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAC-TGCA--------AGATTGACTTA..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCA--------AGATTGACTTATGATT----------------TCTATCGTT----........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AAGTTCG-------------------------ATAAAGAG------------------GGTGTT...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AAAGTTCG-------------------------ATAAAGAG------------------GGT..............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---A---TAGATCGATTTGCATCC--ATTGAC-.................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................TATACTCTT-------------TTAGCTT------------------------------------------------------------------------------------GGAAA.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCGCTTCTATATCGCCTCC.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--ATTGAC-TGCA--------AGATTGACTTATG........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TATTAC-----G----CATCAGTTTGCCGACCTGT.....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATCGTT----TATTAC-----G----CATCAGTTTGCC............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AGTTCG-------------------------ATAAAGAG------------------GGTGTTACT........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATG----------------T--T---A---TAGATCGATTTG...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................TAGAATTGCGCTAAGCCTGGAT..........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------ATAAAGAG------------------GGTGTTACTATTCAA..................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGACTTATGATT----------------TCTATCGTT----TAT.....................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCC--ATTGAC-TGCA--------AGATTGA..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................T-TTGAGAAAAGCTTATTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEre2
ATTAACAATT--GTAGCT-TTGAAAACAGCTTATTAAACAAACGTATTAAACAAG-------------CTTATCAA----------------------------------------------------------------------------AT--------------AATAT--------------------TCCTCTTTAGCCAAACCTTTTTAGCTC----------------------------------------------------------------------------GGAGACTTG----AGAC-TAGAAATTCACTAACCCC-GATGAATA---------------------------------ATATTAAAAAAGAGCG-------------------------A-AAAGAG------------------GGTGAAGCTATTCAAGTCATTGTACA-CTATCCAAAGTTTATG----------------C--A---G---TAGATCGGTTTGCATCC--TGTGAC-TCCA--------AGATTGACTTATGATT----------------TCTACCGTT----TATTAT-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCCGATAACGAACTCA....2011.0011000000
.............................................................................................................................................................................................................................................................................................................................................GATGAATA---------------------------------ATATTAAAAAAGAGC.....................................................................................................................................................................................................................................................................................2311.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCTCCGATAACGAACTCATG..2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGTCGCGCTTCTATATCGCCTCC.................2611.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................ATTAAAAAAGAGCG-------------------------A-AAAGA....................................................................................................................................................................................................................................................2011.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCCGACCTGTCGCGCT...............................2011.0011000000
...................................AAACAAACGTATTAAACAAG-------------CTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
droYak3
ATTAACAAGT--GTAGCTTTTGAAAACAGCTTATTAAACAA---------------------------------------------------------------------------------------------------------------AT--------------AATATGGAATATAAGTTATGAACTGTACTCTTTGGCAAGACTTATTTAGTTT----------------------------------------------------------------------------AGAGACTTGTAAAGTGCA-----------TAATCCCGAATGAATA---------------------------------GTACTTAAAAAGAGCG-------------------------AAAAAGAG------------------GGTAAAACTATTCAAGTGATTGTATG-ATATCCCAGGTTAATG----------------T--A---G---TAGATCGGTTTGCATCC--TGCGAC-TCCA--------CGATTGACTTATGATT----------------TCTACCGTT----TATTAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...AACAAGT--GTAGCTTTTGAAAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................GCG-------------------------AAAAAGAG------------------GGTAAAACT........................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................GTGCA-----------TAATCCCGAATGAATA---------------------------------GTACTT..............................................................................................................................................................................................................................................................................................2711.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................GTACTTAAAAAGAGCG-------------------------AAAAAGAG------------------GGT..............................................................................................................................................................................................................................2711.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCCGATAACGAACTCATGA.2311.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATCC--TGCGAC-TCCA--------CG...................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTATGATT----------------TCTACCGT.............................................................................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................TACTTAAAAAGAGCG-------------------------AAAAAGAG------------------G................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-TCCA--------CGATTGACTTATGATT----------------TCTACC...............................................................................2911.00110000000000
....................................................................................................................................................................................AAGTTATGAACTGTACTCTTTGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEug1
AGTAACCCCT--TTAACT-TTGATAATATTTTAAGGA-------------------------------TTTATTAAGTAAT-----------A---------------------CAGAGGTTTAACTATGATTAAGCTGTGTGAAAAT----TTAAAAAT-----------------------------TCTAAACTTTT-------------TTAA------------------------------------------------------------------------------------------AAATAT------------------------AATA---------------------------------ATATTTAATAATA----------------------------------------------------TATAAATTA-------------------C------------CAAA----------------T--A---G---TAGATCGTTTTGCATCC--CTGTAC-TTGA--------TGATTGACTTATGATT----------------TCTACTGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
droBia1
ATCGAGTATT--AT--------------------TTAATAT--------------TTCCATAG---CC-------AGTAACTGATTTGACTTAATTTAAATTGAATTTTTCTTG-------------------------G-TTTTTAAG---TTAA-AATAAATGG--------------------------------------------------------------------------------------------------------------------------------------ATTTG----AATC------------------------------------------------------TATT--------------------------------GTG----------------------------------------------------------ATA-TTAACTGAAGTTCA-------------------GCTAGAG---CCGATCGGCTTGCATCC--CCGCAC-TCGA--------TGATTGACTTATGATT----------------TCTACCGTT----TA-TAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
droTak1
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGGTTTGCATCC--CTGTTC-TTGA--------CGATTGACTTATGATT----------------TCTACCGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
droEle1
ATTAACAATAATATAAC---TTAAAACGACTTGCTAAATTA---------------------------------------------------------------------------------------------------------------TG--------------AATATTGATTATAA--------------------------------------------ACAATATCAAATTATGA-TTGG---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT----------------T--A---G---TAGATCGGTTTGCATTC--CTGTAT-TTTA--------TGATTGATTTATGATT----------------TCTACCGTT----TATCAC-----GTTATCATCAGTTTGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
droRho1
AATAACAATTATGTAAC---TTAAATCGGCTTATTTAACAA---------------------------------------------------------------------------------------------------------------TT--------------AATAGTGATCATAT------------------------------------------------------------A-TTGG---TATAACAACTTCTTTAATAATGTTTTAGCAAATTTAAAATACTTTA-------------------------------------TAGACGAATATTAACGATTGTTTGTTAACGTATAATTGTTGTATTTAAATATTGCTTAAAACTAAACATGAGATAGTATCTAAAGTGAGTGCGTCCAGAGTTATACTTGTGTTAC-------------------------------TAAG----------------C--G---G---TAGATCGGTTTGCATTC--CTGTAT-TCTA--------TGATTGACTTATGATT----------------TCTACCGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
droFic1
TTCAAGAAGGAA---ACT-ACAAATTAAAAAT---GTATTT----------------------TGTAT--------------------------------------------------------------------------GTTCAAAGAA-----------------CATTTAA--------------------------------------------AACAT----------G------------GTTT--------------------------------------------------------------------------------AATAGTCGAATATTA----------------------------------------------------------------------------------------------------------------------------------------A----------------T--T---G---TCGATCGGCTTGCATCC--GAGTAC-CTAA--------TGATTGACTTATGATT----------------TCTACCGTT----TATCAC-----G----CATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAGCTAATGATSizeHit CountTotal NormTotal
No Reads
droKik1
TTT------------------GATATCAGCTG-----------------------------------------------------------------------------------------------------------CATAAAAAAA---TTAA-AATAAATAATAA--------------------ATTGCAAAATT-------------TTAATTATTAAAAATAATAT----------------------------------------------------------------------------------------------------------TT---------------------------------AT--------------------------------------------------------------------------------------------AATTAAAAAGTTTAGC----------------A--A---C---TTTATTGGTTTGCATCCTCCAGAAACTTATTGA-------AATGACTTATGATTTATATT--------------ACGTT--TATATCACGCCGTT----TATCAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
droAna3
T-------------CACT-TTGAACTGAGTTC----------------------------------GT--------------------------------------------------------------------------GTCAAAATTG-----------------CAATTGA--------------------------------------------TTAAT----------G------------TCCT--------------------------------------------------------------------------------AGTTGACGA---------------------------------ATC----------------------------------------------------------------------T-------------------C------------CATATAGTAGCTCTTATGCA-GTTATAG---ATATTCTATTTGCAACC--CTGATC-CT-TTGAATTTATAGTTGATTTAT-------ACCCCGTTTGATTTATACCGT---------AT-----G----TATTAGTTCGCCGACCTGTCGCGCTTCTATATCGCATCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGCCGACCTGTCGCGCT...............................2112.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCGACCTGTCGCGCTTCTATATCGC.....................2811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGCCGACCTGTCGCGCTTCT............................2411.001100000
............................GTTC----------------------------------GT--------------------------------------------------------------------------GTCAAAATTG-----------------CAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGTCGCGCTTCTATATCGCATCC.................2711.001100000
droBip1
TTTTT----------------GA----------TTAAATAT-------------------------CT-------AGCA-------------------------------------------------------------------ATATGA-----------------TTATTGA--------------------------------------------TTGAT----------GATTATGAT----TTAT--------------------------------------------------------------------------------ATTTGACGT------------------------ATTATTG--------------------------AGC----------------------------------------------T-------------------C------------AAAATAGTATCTCTTATGCA-GTTATAGATATCCTTCCGTTTGCAACC--CTGATC-CT-TTGAATTTATAGTTGACTTAT-------TCCTCGTTTGATTTATACCA---------TAT-----G----TATTAGTTCGCCGACCTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotal
No Reads
dp5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTA----TGATGT-----G----CATCAGTTTGCCGACTTGTCGCGCTTCTATATAGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCTTCTATATAGCCTCC.................2011.0010100000000
droPer2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGTA----TGATGT-----G----CATCAGTTTGCCGACTTGTCGCGCTTCTATATAGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGATAACGAACTCAT...1812.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGCCTCCGATAACGAACTCAT...2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCCGATAACGAACTCATGAT2411.001100000
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TGTTTT-----G----CATCAGTTTGTCGACTTGTCACGCTTCTATATTGCCTCCGATAATGAACTTATGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGATT----------------ATTATTATTATTGTATTAC-----G----CATTAGTTTGTCGACTTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTCGACTTGTCGCGCT...............................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATT----------------ATTATTATTATTGT.......................................................................2070.141100000
droGri2
TATTACTT----GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT----------------ATTATTG------TATTAT-----G----CATTAGTTTGTCGACTTGTCGCGCTTCTATATCGCCTCCGATAACGAACTCATGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:07 PM