ID:

dsi_19204

 Coordinate:

3r:18083760-18083909 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.3 -3.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
PROTOPDNAP+
mature
star
  1. 2l:21252720-21252735 -
  2. 2r:790238-790253 +
  3. 2r:797165-797180 -
  4. 3r:3396925-3396940 -
  5. dsi_19204  3r:18083795-18083810 -
  6. 3r:27049551-27049566 +
  7. dsi_16976  x:20397400-20397415 -

Sense Strand Reads

AACATACGTGTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTAGAGCTGTAGAGCTCTCCGCTCTCTCGCTCTTGAGCACAAATTCAAGAGAGCCTGGAGCTCTCTTTGCAAAAAAATCGTATCCTGTTATTCCAGTGTCTTTGGTAGAAAGAAGCGTTTAGCTTTTGTGCCCACTAATACAACGGTTTCATAGGGCATAGCTTATCTGCATGGCATGCTGCCGAAAGCAGTCATTCATCGCGA
*****************************************************************************************************************************................((.(((((.....))))).))...************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M025
embryo
 M053
female body
 SRR902009
testis
 GSM343915
embryo
..........TGAGCACACATACAGTTGTCGGCTGT...................................................................................................................................................................................................................... 26 1 15 2.87 43 40 0 0 0 1 0 2 0 0 0 0 0
............TGCACACATACAGTTGT............................................................................................................................................................................................................................. 17 0 20 1.85 37 0 37 0 0 0 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGCTGT...................................................................................................................................................................................................................... 24 0 5 1.20 6 3 0 0 1 1 0 1 0 0 0 0 0
........TATGTGCACACATACAGTTGTCGGC......................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTATCCTGTTATTCCAGTG.......................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................TGCAACAAAATGATATCCTGTTA.................................................................................................................. 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................TGCAACAAAATGATATCCTGTT................................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......CGTGTGTGCACACATACAGTTG.............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................CTGTCACTGTATGCGTAGA....................................................................................................................................................................................................... 19 0 16 0.88 14 0 0 14 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGTCTTTTGTAGAATGAACC........................................................................................ 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGC......................................................................................................................................................................................................................... 21 0 7 0.43 3 0 1 0 0 0 1 0 0 1 0 0 0
............TGCACACATACAGTTGTCGGCTGTCA.................................................................................................................................................................................................................... 26 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGCTGTCACT.................................................................................................................................................................................................................. 28 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0 0 0
..........TGTGCACACATACAGTTGTCGGCTGTCAC................................................................................................................................................................................................................... 29 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0
..........TGTGCACACATACAGTTGTCGGCTGT...................................................................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGTCGATGGTAGAACGAAG......................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGCTGTCACTG................................................................................................................................................................................................................. 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........TGTGCACATATACAGTTGTCGGCTGT...................................................................................................................................................................................................................... 26 1 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTGCCTTTTGTAGAATGAAGC........................................................................................ 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................CGGCTGTCACTGTATGCGTAGA....................................................................................................................................................................................................... 22 0 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0 0
..........TGTGCACACATACAGTTGTCGGCTGTC..................................................................................................................................................................................................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGCTGTCAC................................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
..........TGTGCACACATACAGTTGTCGGCTGTCA.................................................................................................................................................................................................................... 28 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
..........TGTGCACATACACAGTTGTCGGCTGTCAC................................................................................................................................................................................................................... 29 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
............TGCACATACACAGTTGTCGGCTGTCACTG................................................................................................................................................................................................................. 29 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGATGT...................................................................................................................................................................................................................... 24 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGCTGACACTT................................................................................................................................................................................................................. 29 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................GGTAGAAAGAAGCGTT..................................................................................... 16 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.........GTGTGCACACATACAGTTGTCGGC......................................................................................................................................................................................................................... 24 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0
..........TGTGCACATACACAGTTGTCGGCTGT...................................................................................................................................................................................................................... 26 2 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0
..........TGTGCACACATACAGTTGTCGGCT........................................................................................................................................................................................................................ 24 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0
...........GTGCACACATACAGTTGTCGGC......................................................................................................................................................................................................................... 22 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
..........TGTGCACATATACAGTTGTCGGCTG....................................................................................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
............TGCACACATACAGTTGTCGGCT........................................................................................................................................................................................................................ 22 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................GCTCTCTCAGTCGTGAGCA..................................................................................................................................................................... 19 3 16 0.13 2 0 2 0 0 0 0 0 0 0 0 0 0
....................TACAGTTGTCGGCTGTCACTGTA............................................................................................................................................................................................................... 23 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
....................TACAGTTGTCGGCTGTCACTGTATGC............................................................................................................................................................................................................ 26 0 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................CCTGGAGCTGTCTTTCCA..................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0
.........GTGTGCACATACACAGTTGTCG........................................................................................................................................................................................................................... 22 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
...............ACACATACAGTTGTCGGCTGT...................................................................................................................................................................................................................... 21 0 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0
.............GCACACATACAGTTGTCGG.......................................................................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
..........TGAGCACACATACAGTTGTCGGCTG....................................................................................................................................................................................................................... 25 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.........GTGTGCACACATACAGTTGTCGGT......................................................................................................................................................................................................................... 24 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
....................TACAGTTGTCGGCTGTCACT.................................................................................................................................................................................................................. 20 0 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
.................ACATACAGTTGTCGGCTGTCACT.................................................................................................................................................................................................................. 23 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..................TATACAGTTGTCGGCTGTCACTG................................................................................................................................................................................................................. 23 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
............................TCGGCTGTCTCTGTA............................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGCAGCTCTCTTTAAAAAAA................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................AGCTCTCCGCTCTCTCGC.............................................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.............GCATACATACAGTTGTC............................................................................................................................................................................................................................ 17 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
................AACATATAGTTGTGGGCTGTC..................................................................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
...............ATACATACAATTGTCGGCTGTCAC................................................................................................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGGAAGAAAGGAGCCTTTA................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................TGTTGTCGGCTGTCACA.................................................................................................................................................................................................................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGTATGCACACACGTGTGTATGTCAACAGCCGACAGTGACATACGCATCTCGACATCTCGAGAGGCGAGAGAGCGAGAACTCGTGTTTAAGTTCTCTCGGACCTCGAGAGAAACGTTTTTTTAGCATAGGACAATAAGGTCACAGAAACCATCTTTCTTCGCAAATCGAAAACACGGGTGATTATGTTGCCAAAGTATCCCGTATCGAATAGACGTACCGTACGACGGCTTTCGTCAGTAAGTAGCGCT
*************************************************************************************................((.(((((.....))))).))...***************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR902008
ovaries
 M053
female body
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
..........................................................CCGAGAGGCGAGAGAGCGAGAACTCG...................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAAACGTTTTTTTAGCATAGGACAAT.................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACATACGCATCTCT..................................................................................................................................................................................................... 25 1 5 0.60 3 2 1 0 0 0 0 0 0 0 0 0 0
...........................CAGCCGACAGTGACATA.............................................................................................................................................................................................................. 17 0 15 0.53 8 8 0 0 0 0 0 0 0 0 0 0 0
.CGTGTGTACACACGTGTGTATGTCAAC.............................................................................................................................................................................................................................. 27 3 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................TCTCGAGAGGCGAGAGAGCGAGAACT........................................................................................................................................................................ 26 0 11 0.36 4 3 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................ATAAGGCCACAGCTACCATCT............................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................CGACAGTGACATACGCTT......................................................................................................................................................................................................... 18 1 20 0.30 6 0 0 0 0 6 0 0 0 0 0 0 0
.................................ACAGTGACATACGCTTCT....................................................................................................................................................................................................... 18 1 20 0.30 6 0 0 0 0 6 0 0 0 0 0 0 0
.........................................................CTCGAGAGGCGAGAGAGCGAGAACT........................................................................................................................................................................ 25 0 11 0.27 3 2 1 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACATA.............................................................................................................................................................................................................. 16 0 16 0.25 4 4 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GGGCTTTCGGTAGTAAGTAG.... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CGTAAGACGGCTTTCGT.............. 17 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACATACGCA.......................................................................................................................................................................................................... 20 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0 0 0
............ACGTGTGTATGTCAACAGCCGACAGT.................................................................................................................................................................................................................... 26 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................TCGAGAGGCGAGAGAGCGAGAACT........................................................................................................................................................................ 24 0 11 0.18 2 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................AGAGGCGAGAGAGCGAGAACT........................................................................................................................................................................ 21 0 17 0.18 3 0 0 0 2 0 1 0 0 0 0 0 0
.......................TCAACAGCCGACAGTGACAT............................................................................................................................................................................................................... 20 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTCGAGAGGCGAGAGAGCG.............................................................................................................................................................................. 19 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
...................................................CGACATCTCGAGAGGCGAGAGA................................................................................................................................................................................. 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGAGAGGCGAGAGAGCGAGAACT........................................................................................................................................................................ 23 0 14 0.14 2 0 0 0 0 0 2 0 0 0 0 0 0
..........ACACGTGTGTATGTCAACAGCCGA........................................................................................................................................................................................................................ 24 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0
...............TGTGTATGTCAACAGCCGACAGTGA.................................................................................................................................................................................................................. 25 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................TCAACAGCCGACAGTGACGTACGCCTCT....................................................................................................................................................................................................... 28 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
.............CGTGTGTATGTCAACAGCCTAG....................................................................................................................................................................................................................... 22 2 17 0.12 2 0 0 0 0 0 2 0 0 0 0 0 0
...............................................................AGGCGAGAGAGCGAGAACT........................................................................................................................................................................ 19 0 17 0.12 2 0 0 0 2 0 0 0 0 0 0 0 0
...........................CAGCCGACAGTGACAT............................................................................................................................................................................................................... 16 0 17 0.12 2 2 0 0 0 0 0 0 0 0 0 0 0
................GTGTATGTCAACAGCCG......................................................................................................................................................................................................................... 17 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0
.............................GCCGACAGTGACATACGCATCT....................................................................................................................................................................................................... 22 0 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
...........................CAGCCGACAGTGACATACGCATCT....................................................................................................................................................................................................... 24 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................ATCTCGAGAGGCGAGAGAGCGAGAAC......................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................GAGGCGAGAGAGCGAG............................................................................................................................................................................ 16 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACATACGCATCTTG..................................................................................................................................................................................................... 25 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................CAGCCGACAGTGACATACGCATC........................................................................................................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACATACGCATC........................................................................................................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGAGAGGCGAGAGAGCG.............................................................................................................................................................................. 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTTTTAGCATAGGAA..................................................................................................................... 15 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
...........................CAGCCGACAGTGACATACG............................................................................................................................................................................................................ 19 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACATACG............................................................................................................................................................................................................ 18 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
...............TGTGTATGTCAACAGCCGACGGTGA.................................................................................................................................................................................................................. 25 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTTCGAGAGGCCAGAGAGCGAGAACT........................................................................................................................................................................ 26 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................CGACATCTCGAGAGGCGAGAGAGCGA............................................................................................................................................................................. 26 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
......................GTCAGCAGGCGACAGTGACAT............................................................................................................................................................................................................... 21 2 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................GCCGACAGTGACATA.............................................................................................................................................................................................................. 15 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
............................AGCCGACAGTGACAT............................................................................................................................................................................................................... 15 0 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................CGAGAGGCGAGAGAGC............................................................................................................................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................AGGCGAGAGAGCGAGA........................................................................................................................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
....................ATGTCAGCAGGCGGCAGTGAC................................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................CAGCCGACAGTGACA................................................................................................................................................................................................................ 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTCGAGAGGCGAGAGA................................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCGAGAGGCGAGAGA................................................................................................................................................................................. 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................CAGTGCCATACGCATGAC...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................GCCGACAGTGACATACGAAT......................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TCTCGAGAGGCGAGAG.................................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................TATGTCAGCAGGCGACAGTGA.................................................................................................................................................................................................................. 21 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................GCAGGCGACAGTGACATACGCT.......................................................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..........ACACTTGTGTATGTCAGCAG............................................................................................................................................................................................................................ 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
.........CACACTTGTGTATGTCAGCAG............................................................................................................................................................................................................................ 21 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................CGAGAGAGCGAGAACT........................................................................................................................................................................ 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................GAGAGGGGAGAGAGAGAGAACT........................................................................................................................................................................ 22 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:18083710-18083959 - dsi_19204 AACATACG---T--------GTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTAGA------------GCTGTAGAGCTCTCCGCTCTCTCGCTCTTGAGCACAAATTCAAGAGAG----CC---------------TGGAGCT------------------------CTCTTTGCAAAAAAATCGTAT------------CCTGTTA-TTCCAGT-GTCTTTGGTAGA-----AAGAAGCGT-TTAGCTTTTGTGCCCACTAATACA-----AC-GG---TTTCATAGGGCATAGCTTATCTGCATGGCATGCTGCCGAAAGCAGTCATTCATCGCGA
droSec2 scaffold_0:18915238-18915487 - dse_566 AGCATACG---T--------GTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTAGA------------GCTGCAGAGCTCTCCGCTCTCTCGCTCTTGAGCACAAATTCAAGAGAG----CC---------------TGGAGCT------------------------CTCTTTGCAAAAAAATCGTAT------------CTTGTTA-TTCTAGT-GTCTTTGGTTGA-----AAGAAGCGC-TTAGCTTTTGTGCCCAATAATACA-----AC-GG---TTTCATAGGGCATAGCTTATCTGCATGGCATGCAGCCGAAAGCAGTCATTCATCGCGA
dm3 chr3R:18558706-18558994 - AGCATACA---TGAACATACGTGTGCACACATGCAGTGGTCGGCTGTCACTGTATGCGTAGAAAAGAGCTGTTCGCTGTAGAGCTCTCCGCTCTCTCGCTCTTGAATAAAAATGAGAGAGAGAGAGCCTTAGGCAACCTCCTCTAGAGCCA------------C-GC--------------CAAAAAAATTGT-------TACGCATCTTGTTA-TTCTAGT-GTCTTTGGTAG---------AAGCGTGGTAGCTATTGTGCCCAATAATACG---G-AC-GG---TTTCATAGGGCATAGCCTATCTGCATGGCATGCAGCCGAAAGCAGTAATTCATCGCGA
droEre2 scaffold_4929:25884186-25884363 - AGCATACG---T----------GTGCACACATACAGTGATCGGCTGTCGTTGTATGCGTACATGAGCGCTCT---CT------CTCTCT-CTCTCTGGCTTTTGAACAAAAATTCGAGAGAG----CC---------------TGGAGCCA------------GCACG--------------AAAAAAATCGTATGGCGTTACACATCTTATTA-TTCTTGT-GTCTGTGCTAGT-----ACGATACGG-TGAG-------------------------------------------------------------------------------------------
droYak3 X:21271100-21271309 + ATG------CATG--------TGTGCACCAATACAGTGGTCAGCTGTCGCTGTATGCGTACAAGAGAGCTGCTGGCTCTAGAGCTCTCCGCTCTCTGACTTTTGAACAAAATTTCGAGAGAG----CC---------------TGGAGCCACTTGAAAAGCCAGCACGAAAAAATCGTGTGCAAAAAAATCGTAT------------CTTGTTA-TTCTAAT-GTCTTTGGTATT-----A---------CTAACATTTGTGCT----------------------------------------------------T----------------------CCGAAT
droEug1 scf7180000409768:703205-703263 - GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGGGGTTAGCTTATCTACATGCTAGGAAACCCAATGCAGTCATTCATCGCGA
droBia1 scf7180000297315:4305-4480 + CA---------------------------CATACATTGGTTGGTTGTCGCTGTGTGTGTACAAGGGAGCGGCTGGCTCTAGGACGCTCC-CTCTCTGGCTCTAGAACAAATTTTCAAGAGAG----CC---------------TGGAGCCAGTTCTAGAGCCAGTAAGAACAAATCG-----AAAAACATAGTATGGA-----ACGCCATATTA-TTCTAAA-GTTTTTGTTAA--------------------------------------------------------------------------------------------------------------A
droTak1 scf7180000415376:12651-12797 - TGAATACA---T----------GTGCACACATACAGTCGTCGGTTGTCGCTGTATGCGTACAAGAGAGCGGCTGGCTCTAGGGCGCTCT-CTCGCTGGCTTTTGGGCAA--------GAGAG----CG---------------AAAAGCCAGTTGG-----------------CTATTGGGCAAAAAAATTGTAT------------GGCGTTA-TCC-------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491017:253816-253901 - AGT------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCCGAATAATGCT---GATAT-G---GTTTACAGGGGGTTGCTTATCTCCATGGCATGAGACCAAAAGCGGTCATTCATCGTGA
droRho1 scf7180000767489:3798-4010 - TGAATACA---T----------GTGAACACATACTTTCGTCGGCTGTCGCTGTATGCGTGCAAAAGAACGGCTAGCTTTAGAGCGCTCT-CTCGCTGGCTTTTGGGCA---------GAGAG----CG---------------AAACACCAGTTGAAAAGGCAGCACAAAAAATTCGTGTGCAAAAAAATCGTATGGCGTTACGCATCTTAGAGTTTATATTGGTATTTGGTAATACGGCAAGAA------GAGCTTTTGT------------------------------------------------------------------------------------
droFic1 scf7180000454055:260541-260597 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGGGGGTAGCTTATCTCCATGCCATGAAGCCAAAGCCAGTCATTCACCGCGA
droKik1 scf7180000302697:1117363-1117421 - GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCAGGGACTAGCTTATCTCCATGCCAGAACTCCAAGAGCGGTCATTCACCGCGA
droAna3 scaffold_13340:12986673-12986823 + GAAGTTCTC--T----------GTGGAGGAGGCCATCAACTTGGCGAGACAGTGTGCTTTGGTGGGAGGTAA---TA------CTTTCA-CTCTTCTATCA------------------------------------------------------------------------------------------------------------------GT-------------------------------------------------ATATTAAA-----AT-TT---ACTTTTAGGGCATGGCTTATATGCATTCCATGGAGCCAAAGACCCTAGTCCACCGCGA
droBip1 scf7180000396691:1642743-1642822 + CCATTA------AGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTCGTTTG-G---GTTTCCAGGGGATCGCCCATATGCATGCCATGACGCCCAAGGCGGTGGTTCATCGCGA
dp5 2:6275476-6275550 + GCA------TATTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-----TC-T---CTGCCCTAGGGTGTTGCTTATCTTCATGCAATGAAACCCAAAGCGGTGATACATCGTGA
droPer2 scaffold_0:99677-99751 + GCA------TACTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-----TC-T---CTGCCCTAGGGTGTTGCTTATCTTCATGCCATGAAACCCAAAGCGGTGATACATCGCGA
droWil2 scf2_1100000004515:2907281-2907345 + ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTATTACAGGGCCTAGACTATTTGCATGCCATGACGCCCAAACCATTGATTCATCGTGA
droVir3 scaffold_12963:8138810-8138893 + ACT------AAT-----------------------------------------------------------------------------------------------------ACAATAAGA----TC---------------CGT-----------------------------------------------------------------------------------------------------------------------------------TTTTT----TTTTTGCAGGGCATTGCCTATTTACATGCCATGAAACCAAGGTCTGTGATTCATCGTGA
droMoj3 scaffold_6500:18434973-18435030 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTAGGGCGTTGCATACCTGCACGACATGACACCAAAGCCTGTCATTCATCGCGA
droGri2 scaffold_14906:12034834-12034904 - TTA------AGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------------------ATTCT----CATTTATAGGCTATAACTTATATGCATGGCAAGGAACC---GCCCCTTATTCATCGAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AACATACG---T--------GTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTAGA------------GCTGTAGAGCTCTCCGCTCTCTCGCTCTTGAGCACAAATTCAAGAGAG----CC---------------TGGAGCT------------------------CTCTTTGCAAAAAAATCGTAT------------CCTGTTA-TTCCAGT-GTCTTTGGTAGA-----AAGAAGCGT-TTAGCTTTTGTGCCCACTAATACA-----AC-GG---TTTCATAGGGCATAGCTTATCTGCATGGCATGCTGCCGAAAGCAGTCATTCATCGCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................TGCACACATACAGTTGT.................................................................................................................................................................................................................................................................................................................17201.8537000000000037000000
.......................TGCACACATACAGTTGTCGGCTGT..........................................................................................................................................................................................................................................................................................................2451.20600000013110000000
...............................................................................................................................................................................................GTAT------------CCTGTTA-TTCCAGT-G.........................................................................................................................1911.00100001000000000000
......CG---T--------GTGTGCACACATACAGTTG..................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
...........................................CTGTCACTGTATGCGTAGA------------...............................................................................................................................................................................................................................................................................19160.8814000014000000000000
.......................TGCACACATACAGTTGTCGGC.............................................................................................................................................................................................................................................................................................................2170.43301100000001000000
.......................TGCACACATACAGTTGTCGGCTGTCA........................................................................................................................................................................................................................................................................................................2650.40200000011000000000
.......................TGCACACATACAGTTGTCGGCTGTCACT......................................................................................................................................................................................................................................................................................................2850.40200000020000000000
.....................TGTGCACACATACAGTTGTCGGCTGTCAC.......................................................................................................................................................................................................................................................................................................2950.40200000002000000000
.....................TGTGCACACATACAGTTGTCGGCTGT..........................................................................................................................................................................................................................................................................................................2650.40200000002000000000
.......................TGCACACATACAGTTGTCGGCTGTCACTG.....................................................................................................................................................................................................................................................................................................2930.33100000001000000000
........................................CGGCTGTCACTGTATGCGTAGA------------...............................................................................................................................................................................................................................................................................22100.20200000000200000000
.....................TGTGCACACATACAGTTGTCGGCTGTC.........................................................................................................................................................................................................................................................................................................2750.20100000010000000000
.......................TGCACACATACAGTTGTCGGCTGTCAC.......................................................................................................................................................................................................................................................................................................2750.20100000001000000000
.....................TGTGCACACATACAGTTGTCGGCTGTCA........................................................................................................................................................................................................................................................................................................2850.20100000000010000000
.....................................................................................................................................................................................................................................GGTAGA-----AAGAAGCGT-T..............................................................................................1670.14100000000001000000
....................GTGTGCACACATACAGTTGTCGGC.............................................................................................................................................................................................................................................................................................................2470.14100000000100000000
.....................TGTGCACACATACAGTTGTCGGCT............................................................................................................................................................................................................................................................................................................2470.14100000010000000000
......................GTGCACACATACAGTTGTCGGC.............................................................................................................................................................................................................................................................................................................2270.14100000000001000000
.......................TGCACACATACAGTTGTCGGCT............................................................................................................................................................................................................................................................................................................2270.14100000000000010000
...............................TACAGTTGTCGGCTGTCACTGTA...................................................................................................................................................................................................................................................................................................2390.11100000000001000000
...............................TACAGTTGTCGGCTGTCACTGTATGC................................................................................................................................................................................................................................................................................................2690.11100000000000010000
..........................ACACATACAGTTGTCGGCTGT..........................................................................................................................................................................................................................................................................................................21140.07100010000000000000
........................GCACACATACAGTTGTCGG..............................................................................................................................................................................................................................................................................................................19140.07100000001000000000
....................GTGTGCACACATACAGTTGTCGGT.............................................................................................................................................................................................................................................................................................................24160.06100000001000000000
...............................TACAGTTGTCGGCTGTCACT......................................................................................................................................................................................................................................................................................................20170.06100000010000000000
............................ACATACAGTTGTCGGCTGTCACT......................................................................................................................................................................................................................................................................................................23170.06100000001000000000
.................................................................................AGCTCTCCGCTCTCTCGC......................................................................................................................................................................................................................................................18200.05100010000000000000
droSec2
AGCATACG---T--------GTGTGCACACATACAGTTGTCGGCTGTCACTGTATGCGTAGA------------GCTGCAGAGCTCTCCGCTCTCTCGCTCTTGAGCACAAATTCAAGAGAG----CC---------------TGGAGCT------------------------CTCTTTGCAAAAAAATCGTAT------------CTTGTTA-TTCTAGT-GTCTTTGGTTGA-----AAGAAGCGC-TTAGCTTTTGTGCCCAATAATACA-----AC-GG---TTTCATAGGGCATAGCTTATCTGCATGGCATGCAGCCGAAAGCAGTCATTCATCGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................GTAT------------CTTGTTA-TTCTAGT-GTCTTTG...................................................................................................................25200.1533000
.......................TGCACACATACAGTTGTCGGCTGT..........................................................................................................................................................................................................................................................................................................2480.1310010
..........................ACACATACAGTTGTCGGCTGTCACTGT....................................................................................................................................................................................................................................................................................................27180.1122000
.................................................................................................................................................................................................................TGTTA-TTCTAGT-GTCTTTGGTTG...............................................................................................................23190.1121010
...............................TACAGTTGTCGGCTGTCACTGTATGC................................................................................................................................................................................................................................................................................................26150.0711000
...................................GTTGTCGGCTGTCACTGTATG.................................................................................................................................................................................................................................................................................................21170.0611000
..........................ACACATACAGTTGTCGGCTGTCACT......................................................................................................................................................................................................................................................................................................25190.0511000
............................................TGTCACTGTATGCGTAGT------------...............................................................................................................................................................................................................................................................................18200.0510001
...............................................................................................................................................................................................GTAT------------CTTGTTA-TTCTAGT-GTCT......................................................................................................................22200.0511000
..........................ACACATACAGTTGTCGGCTGT..........................................................................................................................................................................................................................................................................................................21200.0510010
...................................................................................................................................................................................................................TTA-TTCTAGT-GTCTTTGGTTG...............................................................................................................21200.0511000
dm3
AGCATACA---TGAACATACGTGTGCACACATGCAGTGGTCGGCTGTCACTGTATGCGTAGAAAAGAGCTGTTCGCTGTAGAGCTCTCCGCTCTCTCGCTCTTGAATAAAAATGAGAGAGAGAGAGCCTTAGGCAACCTCCTCTAGAGCCA------------C-GC--------------CAAAAAAATTGT-------TACGCATCTTGTTA-TTCTAGT-GTCTTTGGTAG---------AAGCGTGGTAGCTATTGTGCCCAATAATACG---G-AC-GG---TTTCATAGGGCATAGCCTATCTGCATGGCATGCAGCCGAAAGCAGTAATTCATCGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................TAGAAAAGAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................26353.00159000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010010100010000001000000000000000000000000000000000000000000000000000192317195100000000000000110013170000000001000000000000000000000000000000000000000000000000000000000011000000113000000000000001001000000
............................................TGTCACTGTATGCGTAGAAAAGAGC....................................................................................................................................................................................................................................................................................2585.75460000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102001100000000000000000000000000000000000000000000200000000000010000000210000235220000000000100000000000000000000000000000000000000000000000006000001310000000301000000000000000210000000
.................................................................................................................................................................................................................TGTTA-TTCTAGT-GTCTTTGGTAG---------AAG...................................................................................................2634.33130000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000040000000000000000000000000000000000000000000000000000000100000000000000000000000000012000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................AAAGAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................2243.50140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014600000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CATCTTGTTA-TTCTAGT-GTCTTTGGTA................................................................................................................27203.10620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000240000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000
................................................................AGAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2143.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000020000000000000000000000000000000000000000000000000000000000000110000000000000000000000000010002000000000010010001000
...........................................................................................................................................................................................................................................................................................................TAGCCTATCTGCATGGCATGCAGCCGA...................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TAG---------AAGCGTGGTAGCTATTGTGC..................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
..............................................................AAAGAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2342.75110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000020000000
...........................................................................................................................................................................................................................AGT-GTCTTTGGTAG---------AAGCG.................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000
..........................................................................................................................................................................................................................................................................................................ATAGCCTATCTGCATGGCATG..........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGGCTGTCACTGTATGCGTAGA...........................................................................................................................................................................................................................................................................................23111.64180000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000001320000010000000000000000000000000000000000000000000000000000000000000000000000000000411000000000000000000000000
............................................TGTCACTGTATGCGTAGAAAAGAGCTG..................................................................................................................................................................................................................................................................................2771.57110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000001020000000000000010010000000000000000000000000000000000000000000000001000000000000000000000000000101000000000000000000000000
............................................................GAAAAGAGCTGTTCGCTGTAGAGCTC...................................................................................................................................................................................................................................................................2631.3340000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
.............................................................AAAAGAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................2341.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AAGAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................2141.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000010000
.........................................................................................................................................................................................................ACGCATCTTGTTA-TTCTAGT-G.........................................................................................................................21201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024000
................................................................................................................................................................................................T-------TACGCATCTTGTTA-TTCTAGT-..........................................................................................................................22201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGTTA-TTCTAGT-GTCTTTGGTAG---------AA....................................................................................................25111.09120000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000011100010000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000
....................................................................................TCTCCGCTCTCTCGCTCTTGA................................................................................................................................................................................................................................................21121.08130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000100000000000000000000000000000000000000000000000000000000000000000000000000000000010011000000000000000000000000000000000000000000001000120000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TAATACG---G-AC-GG---TTTCATAGGGCATA............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAGT-GTCTTTGGTAG---------AAGCGTG...............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAGT-GTCTTTGGTAG---------AAGCGTGGTAGC..........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGCGTGGTAGCTATTGTG...................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................................................................TCTTGAATAAAAATGAGAGAGAGAG.............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AAAAGAGCTGTTCGCTGTAGA.......................................................................................................................................................................................................................................................................2141.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010100000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................TGTTA-TTCTAGT-GTCTTTGGTAG---------AAGCG.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ATACG---G-AC-GG---TTTCATAGGGC...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................TGGTAG---------AAGCGTGGTAGCTAT.......................................................................................2111.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................A-TTCTAGT-GTCTTTGGTAG---------AAGCG.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CAGCCGAAAGCAGTAATTCATCGCGA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AAGAGCTGTTCGCTGTAGAGCTCTCCGC..............................................................................................................................................................................................................................................................2821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................TGTGCACACATGCAGTGGTCG...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GAAAAGAGCTGTTCGCTGTAGAGCTCT..................................................................................................................................................................................................................................................................2731.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................GT-GTCTTTGGTAG---------AAGCGTGGTA............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................AGAGAGCCTTAGGCAACCTAAG...........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................AGT-GTCTTTGGTAG---------AAGCGTGGT.............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GTAGAGCTCTCCGCTCTCTCGCTCTT..................................................................................................................................................................................................................................................2671.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
................................................................................................................................TTAGGCAACCTCCTCTAGAGC....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATAAAAATGAGAGAGAGAGAG...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AGGCAACCTCCTCTAGAGCCA------------......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................TAGAGCTCTCCGCTCTCTCGCTCTT..................................................................................................................................................................................................................................................2581.0080000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CATAGCCTATCTGCATGGCATGC.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CACATGCAGTGGTCGGCTGTC.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TCTAGT-GTCTTTGGTAG---------AAGCGTGG..............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................1951.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TACG---G-AC-GG---TTTCATAGGGCATAGCC.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ATACG---G-AC-GG---TTTCATAGGGCATAGCCTA.......................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGGCTGTCACTGTATGCGTAGAA..........................................................................................................................................................................................................................................................................................24110.8290000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000021000100000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
..............................................................AAAGAGCTGTTCGCTGTAGAG......................................................................................................................................................................................................................................................................2140.7530000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
............................................TGTCACTGTATGCGTAGAAAAGAGCT...................................................................................................................................................................................................................................................................................2670.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TAGAAAAGAGCTGTTCGCTGTAGA.......................................................................................................................................................................................................................................................................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TAGAAAAGAGCTGTTCGCTGTAGAGCTC...................................................................................................................................................................................................................................................................2830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TAGAAAAGAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2730.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................CATCTTGTTA-TTCTAGT-GTCTTTGGTAG---------......................................................................................................28200.65130000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000040121200000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................TATGCGTAGAAAAGAGCTGTTCGC.............................................................................................................................................................................................................................................................................24200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
............................................................................TGTAGAGCTCTCCGCTCTCTCGCTCT...................................................................................................................................................................................................................................................2680.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................CTTGTTA-TTCTAGT-GTCTTTGG..................................................................................................................22200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000
............................................TGTCACTGTATGCGTAGAAAAGAG.....................................................................................................................................................................................................................................................................................24100.6060000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000100000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TCTTGTTA-TTCTAGT-GTCTTTGGT.................................................................................................................24200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...................................................................GCTGTTCGCTGTAGAGCTCT..................................................................................................................................................................................................................................................................2050.6030000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TAGAGCTCTCCGCTCTCTCGCTCT...................................................................................................................................................................................................................................................2490.5650000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGGCTGTCACTGTATGCGTAGAAAA........................................................................................................................................................................................................................................................................................2690.5650000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................CATCTTGTTA-TTCTAGT-GTCTT.....................................................................................................................22200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000
...............................................CACTGTATGCGTAGAAAAGAGCTGT.................................................................................................................................................................................................................................................................................25200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......A---TGAACATACGTGTGCACACAT.........................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGTTA-TTCTAGT-GTCTTTGGTAG---------A.....................................................................................................24120.5060000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000101011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CA---TGAACATACGTGTGCACAC...........................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGTAGAGCTCTCCGCTCTCTCGCT.....................................................................................................................................................................................................................................................2480.5040000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AAGAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2240.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000
.....................................................................TGTTCGCTGTAGAGCTCTCCGCTCTC..........................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................AGTGGTCGGCTGTCACTG.....................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GCTGTTCGCTGTAGAGCTCTCCGCTC............................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AAAGAGCTGTTCGCTGTAGAGCTC...................................................................................................................................................................................................................................................................2440.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................TTGTTA-TTCTAGT-GTCTTTGG..................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TGTATGCGTAGAAAAGAGCTGTTCGC.............................................................................................................................................................................................................................................................................26200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GTTA-TTCTAGT-GTCTTTGGTA................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................CATCTTGTTA-TTCTAGT-GTCTTT....................................................................................................................23200.4590000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGGCTGTCACTGTATGCGTAGAAA.........................................................................................................................................................................................................................................................................................2590.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CTCTCCGCTCTCTCGCTCTTG.................................................................................................................................................................................................................................................21120.4250000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000
.................................................................GAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..................................................................AGCTGTTCGCTGTAGAGCTCT..................................................................................................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................TTCGCTGTAGAGCTCTCCGCTCTCT.........................................................................................................................................................................................................................................................2550.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................TTCGCTGTAGAGCTCTCCGCT.............................................................................................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGTAGAGCTCTCCGCTCTCTCGCTC....................................................................................................................................................................................................................................................2580.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................AGAGCTCTCCGCTCTCTCGCTCTT..................................................................................................................................................................................................................................................2480.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGGCTGTCACTGTATGCGTAG............................................................................................................................................................................................................................................................................................21110.3640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000001000
......................................................TGCGTAGAAAAGAGCTGTTCGCTG...........................................................................................................................................................................................................................................................................24200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000002000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000
.....................................................................TGTTCGCTGTAGAGCTCTCCG...............................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................TGTCACTGTATGCGTAGAAAAGA......................................................................................................................................................................................................................................................................................23120.3340000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................AAAATGAGAGAGAGAGAG...........................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................TAGAAAAGAGCTGTTCGCTGTAGAG......................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GAAAAGAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TAGAGCTCTCCGCTCTCTCGCTC....................................................................................................................................................................................................................................................2390.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGCGTAGAAAAGAGCTGTTCGCTGTAGA.......................................................................................................................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGTTCGCTGTAGAGCTCTCCGC..............................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GTAGAAAAGAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGAAAAGAGCTGTTCGCTGTAGA.......................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GCTGTTCGCTGTAGAGCTCTCCGC..............................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATACGTGTGCACACATGCAGT....................................................................................................................................................................................................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000
.....................................................ATGCGTAGAAAAGAGCTGTTCGCTGTAGAG......................................................................................................................................................................................................................................................................3030.3310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GAGCTGTTCGCTGTAGAGCTCTCCGC..............................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GTTCGCTGTAGAGCTCTCCGCTC............................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GAAAAGAGCTGTTCGCTGTAGAG......................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GGCTGTCACTGTATGCGTAGAAAA........................................................................................................................................................................................................................................................................................24100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ATCTTGTTA-TTCTAGT-GTCTTTGGTA................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CATCTTGTTA-TTCTAGT-GTCTTTG...................................................................................................................24200.3060000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCGTAGAAAAGAGCTGTTC...............................................................................................................................................................................................................................................................................19200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CTGTCACTGTATGCGTAGAAAAGAGC....................................................................................................................................................................................................................................................................................2670.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCTGTCACTGTATGCGTAGAAAAGAGC....................................................................................................................................................................................................................................................................................2770.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
........................................................................TCGCTGTAGAGCTCTCCGCTCT...........................................................................................................................................................................................................................................................2270.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGGCTGTCACTGTATGCGTAG............................................................................................................................................................................................................................................................................................22110.2730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGGCTGTCACTGTATGCGTAGAAAAGA......................................................................................................................................................................................................................................................................................2880.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTCGCTGTAGAGCTCTCCGCTCTCTC........................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TCGCTGTAGAGCTCTCCGCTCTCTCG.......................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AGAGCTGTTCGCTGTAGAGCTCT..................................................................................................................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AGAGCTGTTCGCTGTAGAGC.....................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TATGCGTAGAAAAGAGCTGTTCGCT............................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TATGCGTAGAAAAGAGCTGTTCGCTGT..........................................................................................................................................................................................................................................................................27200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AAGAGCTGTTCGCTGTAGAGCTCT..................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AAAGAGCTGTTCGCTGTAGAGCTCT..................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AAAAGAGCTGTTCGCTGTAGAGCTC...................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AAAAGAGCTGTTCGCTGTAGAGCT....................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCATACG---T----------GTGCACACATACAGTGATCGGCTGTCGTTGTATGCGTACATGAGCGCTCT---CT------CTCTCT-CTCTCTGGCTTTTGAACAAAAATTCGAGAGAG----CC---------------TGGAGCCA------------GCACG--------------AAAAAAATCGTATGGCGTTACACATCTTATTA-TTCTTGT-GTCTGTGCTAGT-----ACGATACGG-TGAG-------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................CTGTGCTAGT-----ACGATACGG-TGA............................................................................................2211.0011000000
.....ACG---T----------GTGCACACATACAGTGATCGGC.............................................................................................................................................................................................................................................................................................................26170.0610000100
...........T----------GTGCACACATACAGTGATCGGCTGT..........................................................................................................................................................................................................................................................................................................26180.0611000000
.........................CACACATACAGTGATCGGCTGTC.........................................................................................................................................................................................................................................................................................................23180.0611000000
..........................ACACATACAGTGATCGGCTGT..........................................................................................................................................................................................................................................................................................................21200.0510000010
....................................................................................................................AGAGAG----CC---------------TGGAGCCA------------GCAC..................................................................................................................................................................................20200.0510010000
droYak3
ATG------CATG--------TGTGCACCAATACAGTGGTCAGCTGTCGCTGTATGCGTACAAGAGAGCTGCTGGCTCTAGAGCTCTCCGCTCTCTGACTTTTGAACAAAATTTCGAGAGAG----CC---------------TGGAGCCACTTGAAAAGCCAGCACGAAAAAATCGTGTGCAAAAAAATCGTAT------------CTTGTTA-TTCTAAT-GTCTTTGGTATT-----A---------CTAACATTTGTGCT----------------------------------------------------T----------------------CCGAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................T-GTCTTTGGTATT-----A---------CTAACATTTGTGC..................................................................................2713.00300120000000
..........................................................TACAAGAGAGCTGCTGGCTCTAGAGC.....................................................................................................................................................................................................................................................................26201.2525000000000025
.....................................................................................................TTGAACAAAATTTCGAGAGAG----CC---------------TG........................................................................................................................................................................................................25201.0521021000000000
........................................................................TGGCTCTAGAGCTCTCCGCTCTCTGAC......................................................................................................................................................................................................................................................2711.00101000000000
......................................................................................TCCGCTCTCTGACTTTTGAACAAAAT.........................................................................................................................................................................................................................................2611.00100100000000
......................................................................................TCCGCTCTCTGACTTTTGAACAAAATT........................................................................................................................................................................................................................................2711.00101000000000
....................................................................................TCTCCGCTCTCTGACTTTTGAACAAAA..........................................................................................................................................................................................................................................2711.00101000000000
........................................................................................................................................................................................AAAAATCGTAT------------CTTGTTA-TTCT..............................................................................................................................2211.00101000000000
...........................................................................................................................................................................................AATCGTAT------------CTTGTTA-TTCTAAT-GTCC......................................................................................................................2611.00100100000000
......................................................................................TCCGCTCTCTGACTTTTGAACAAAATTT.......................................................................................................................................................................................................................................2811.00101000000000
................................................................................................................................................................................................TAT------------CTTGTTA-TTCTAAT-GTCTTTGG..................................................................................................................2511.00101000000000
........................................................................................................................................................TTGAAAAGCCAGCACGAAAAAATCGT.......................................................................................................................................................................2631.00302000010000
.............................................................................................................................................................................................................................T-GTCTTTGGTATT-----A---------CTAACATTTG.....................................................................................2411.00101000000000
.................................................................................................................................................GAGCCACTTGAAAAGCCAGCACGAAAA.............................................................................................................................................................................2711.00101000000000
...................................................................................................................................................GCCACTTGAAAAGCCAGCACGAAAAA............................................................................................................................................................................2611.00101000000000
..............................ATACAGTGGTCAGCTGTCGCTGT....................................................................................................................................................................................................................................................................................................23200.7515015000000000
...........TG--------TGTGCACCAATACAGTGGTCAGC.............................................................................................................................................................................................................................................................................................................2530.67200200000000
.........................CACCAATACAGTGGTCAGCTGT..........................................................................................................................................................................................................................................................................................................22200.5511000000000011
.................................................................................................................................................................................................................TGTTA-TTCTAAT-GTCTTTGGTATT-----A---------C..............................................................................................2620.50101000000000
.....................................................................................................TTGAACAAAATTTCGAGAGAG----CC---------------TGG.......................................................................................................................................................................................................26200.501015100010002
........................................................................................................................................................TTGAAAAGCCAGCACGAAAAAATCGTG......................................................................................................................................................................2730.33100000010000
...........TG--------TGTGCACCAATACAGTGGTCAGCTG...........................................................................................................................................................................................................................................................................................................2730.33100100000000
........................................................................................................................................................TTGAAAAGCCAGCACGAAAAAATCG........................................................................................................................................................................2530.33100100000000
.......................TGCACCAATACAGTGGTCAGCTGT..........................................................................................................................................................................................................................................................................................................24200.25500500000000
....................................................TATGCGTACAAGAGAGCTGCTGGCT............................................................................................................................................................................................................................................................................25200.20400000000004
................................ACAGTGGTCAGCTGTCGCTGTATG.................................................................................................................................................................................................................................................................................................24200.15303000000000
..........................................................TACAAGAGAGCTGCTGGCTCTAGAGCT....................................................................................................................................................................................................................................................................27200.15301000020000
.....................................................................................................TTGAACAAAATTTCGAGAGAG----CC---------------T.........................................................................................................................................................................................................24200.15330000000000
............................CAATACAGTGGTCAGCTGTCGCTG.....................................................................................................................................................................................................................................................................................................24200.15303000000000
......................................................................................................TGAACAAAATTTCGAGAGAG----CC---------------TG........................................................................................................................................................................................................24200.10202000000000
.....................................................................................................TTGAACAAAATTTCGAGAGAG----CC---------------..........................................................................................................................................................................................................23200.10202000000000
.........................CACCAATACAGTGGTCAGCTGTCGC.......................................................................................................................................................................................................................................................................................................25200.10202000000000
..............................ATACAGTGGTCAGCTGTCGCTGTA...................................................................................................................................................................................................................................................................................................24200.10200000020000
.......................................................GCGTACAAGAGAGCTGCTGGCTCTAGA.......................................................................................................................................................................................................................................................................27200.10201100000000
..............................................................................................................ATTTCGAGAGAG----CC---------------TGGC......................................................................................................................................................................................................18200.10200000000002
............................................TGTCGCTGTATGCGTACAAGAGAGC....................................................................................................................................................................................................................................................................................25200.10202000000000
...........................CCAATACAGTGGTCAGCTGTCGC.......................................................................................................................................................................................................................................................................................................23200.05100100000000
.......................TGCACCAATACAGTGGTCAGCTGTCGC.......................................................................................................................................................................................................................................................................................................27200.05100000010000
.................................................................................................................TCGAGAGAG----CC---------------TGGAGCCACTTGA.............................................................................................................................................................................................24200.05101000000000
................................................GCTGTATGCGTACAAGAGAGCTGCT................................................................................................................................................................................................................................................................................25200.05101000000000
..........................................................TACAAGAGAGCTGCTGGC.............................................................................................................................................................................................................................................................................18200.05101000000000
.....................................................................................................TTGAACAAAATTTCGAGAGAG----C..........................................................................................................................................................................................................................22200.05101000000000
......................................................TGCGTACAAGAGAGCTGCTGGCTC...........................................................................................................................................................................................................................................................................24200.05101000000000
.............................................................................................................AATTTCGAGAGAG----CC---------------TGGAGCCACT................................................................................................................................................................................................25200.05101000000000
........................................................................TGGCTCTAGAGCTCTCCGCTC............................................................................................................................................................................................................................................................21200.05100100000000
......................................................................................................TGAACAAAATTTCGAGAGAG----CC---------------TGG.......................................................................................................................................................................................................25200.05101000000000
..........................................................TACAAGAGAGCTGCTGGCTC...........................................................................................................................................................................................................................................................................20200.05101000000000
................................................................................................................TTCGAGAGAG----CC---------------TGGAGC....................................................................................................................................................................................................18200.05100100000000
................................................................................................................................................................................................................TTGTTA-TTCTAAT-GTCTTTGG..................................................................................................................21200.05101000000000
...................................GTGGTCAGCTGTCGCTGTATGCGT..............................................................................................................................................................................................................................................................................................24200.05100000010000
........................................................................TGGCTCTAGAGCTCTCCGCTCTC..........................................................................................................................................................................................................................................................23200.05100100000000
..............................................................................................................ATTTCGAGAGAG----CC---------------TGGAGCC...................................................................................................................................................................................................21200.05110000000000
....................................................................................................................AGAGAG----CC---------------TGGAGCCACTTGAAAAGCC.......................................................................................................................................................................................27200.05101000000000
.....................................................................................................TTGAACAAAATTTCGAGAGAG----CC---------------C.........................................................................................................................................................................................................24200.05110000000000
..............................ATACAGTGGTCAGCTGTCGC.......................................................................................................................................................................................................................................................................................................20200.05100100000000
.................................................................................................................................................................................................................TGTTA-TTCTAAT-GTCTTT....................................................................................................................18200.05101000000000
..............................ATACAGTGGTCAGCTGTCGCC......................................................................................................................................................................................................................................................................................................21200.05100100000000
.......................................................GCGTACAAGAGAGCTGCTGGCTC...........................................................................................................................................................................................................................................................................23200.05101000000000
...............................TACAGTGGTCAGCTGTCGCTGTA...................................................................................................................................................................................................................................................................................................23200.05100100000000
..................................................TGTATGCGTACAAGAGAGCTGCTGGC.............................................................................................................................................................................................................................................................................26200.05101000000000
...............................TACAGTGGTCAGCTGTCGCTGTATG.................................................................................................................................................................................................................................................................................................25200.05100100000000
....................................................TATGCGTACAAGAGAGCTGCTGGCTCT..........................................................................................................................................................................................................................................................................27200.05100100000000
........................GCACCAATACAGTGGTCAGCTGTCG........................................................................................................................................................................................................................................................................................................25200.05101000000000
.....................TGTGCACCAATACAGTGGTCAGCT............................................................................................................................................................................................................................................................................................................24200.05101000000000
..................................................................................................................................................................................................T------------CTTGTTA-TTCTAAT-GTCTTTG...................................................................................................................22200.05101000000000
.......................TGCACCAATACAGTGGTCAGCTG...........................................................................................................................................................................................................................................................................................................23200.05100100000000
........................................................................TGGCTCTAGAGCTCTCCGCTCTCTG........................................................................................................................................................................................................................................................25200.05100100000000
.....................................................................TGCTGGCTCTAGAGCTCTCCGCTCTC..........................................................................................................................................................................................................................................................26200.05101000000000
droEug1
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGGGGTTAGCTTATCTACATGCTAGGAAACCCAATGCAGTCATTCATCGCGASizeHit CountTotal NormTotal
No Reads
droBia1
CA---------------------------CATACATTGGTTGGTTGTCGCTGTGTGTGTACAAGGGAGCGGCTGGCTCTAGGACGCTCC-CTCTCTGGCTCTAGAACAAATTTTCAAGAGAG----CC---------------TGGAGCCAGTTCTAGAGCCAGTAAGAACAAATCG-----AAAAACATAGTATGGA-----ACGCCATATTA-TTCTAAA-GTTTTTGTTAA--------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droTak1
TGAATACA---T----------GTGCACACATACAGTCGTCGGTTGTCGCTGTATGCGTACAAGAGAGCGGCTGGCTCTAGGGCGCTCT-CTCGCTGGCTTTTGGGCAA--------GAGAG----CG---------------AAAAGCCAGTTGG-----------------CTATTGGGCAAAAAAATTGTAT------------GGCGTTA-TCC-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGT------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCCGAATAATGCT---GATAT-G---GTTTACAGGGGGTTGCTTATCTCCATGGCATGAGACCAAAAGCGGTCATTCATCGTGASizeHit CountTotal NormTotal
No Reads
droRho1
TGAATACA---T----------GTGAACACATACTTTCGTCGGCTGTCGCTGTATGCGTGCAAAAGAACGGCTAGCTTTAGAGCGCTCT-CTCGCTGGCTTTTGGGCA---------GAGAG----CG---------------AAACACCAGTTGAAAAGGCAGCACAAAAAATTCGTGTGCAAAAAAATCGTATGGCGTTACGCATCTTAGAGTTTATATTGGTATTTGGTAATACGGCAAGAA------GAGCTTTTGT------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGGGGGTAGCTTATCTCCATGCCATGAAGCCAAAGCCAGTCATTCACCGCGASizeHit CountTotal NormTotal
No Reads
droKik1
GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCAGGGACTAGCTTATCTCCATGCCAGAACTCCAAGAGCGGTCATTCACCGCGASizeHit CountTotal NormTotal
No Reads
droAna3
GAAGTTCTC--T----------GTGGAGGAGGCCATCAACTTGGCGAGACAGTGTGCTTTGGTGGGAGGTAA---TA------CTTTCA-CTCTTCTATCA------------------------------------------------------------------------------------------------------------------GT-------------------------------------------------ATATTAAA-----AT-TT---ACTTTTAGGGCATGGCTTATATGCATTCCATGGAGCCAAAGACCCTAGTCCACCGCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................TGGCGAGACAGTGTGCTTTGGGC.........................................................................................................................................................................................................................................................................................2311.001000010
droBip1
CCATTA------AGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTCGTTTG-G---GTTTCCAGGGGATCGCCCATATGCATGCCATGACGCCCAAGGCGGTGGTTCATCGCGASizeHit CountTotal NormTotal
No Reads
dp5
GCA------TATTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-----TC-T---CTGCCCTAGGGTGTTGCTTATCTTCATGCAATGAAACCCAAAGCGGTGATACATCGTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................GTGTTGCTTATCTTCATGCA.............................2011.0010100000000
droPer2
GCA------TACTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-----TC-T---CTGCCCTAGGGTGTTGCTTATCTTCATGCCATGAAACCCAAAGCGGTGATACATCGCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTATTACAGGGCCTAGACTATTTGCATGCCATGACGCCCAAACCATTGATTCATCGTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ACT------AAT-----------------------------------------------------------------------------------------------------ACAATAAGA----TC---------------CGT-----------------------------------------------------------------------------------------------------------------------------------TTTTT----TTTTTGCAGGGCATTGCCTATTTACATGCCATGAAACCAAGGTCTGTGATTCATCGTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................ATGAAACCAAGGTCTGTGATTCAT.....2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TATTTACATGCCATGAAACCAAGGTC...............2611.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CATGAAACCAAGGTCTGTGATTCAT.....2511.001000000000000001000000000000000000000000000000000000000000000000
...........T-----------------------------------------------------------------------------------------------------ACAATAAGA----TC---------------CGT-----------------------------------------------------------------------------------------------------------------------------------TTTTT----TTTTG......................................................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTAGGGCGTTGCATACCTGCACGACATGACACCAAAGCCTGTCATTCATCGCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTA------AGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------------------ATTCT----CATTTATAGGCTATAACTTATATGCATGGCAAGGAACC---GCCCCTTATTCATCGAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................TGCATGGCAAGGAACC---GCCCCT............2220.50110

Generated: 05/18/2015 at 10:08 PM