ID:

dsi_19179

 Coordinate:

2l:21028269-21028418 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.1 -13.0 -12.6 -12.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
PROTOP_BDNAP-
mature
  1. 2l:22026717-22026740 -
  2. 2r:153906-153929 -
  3. 2r:688909-688932 -
  4. 2r:2110091-2110114 -
  5. 2r:2151298-2151321 -
  6. 2r:3169441-3169464 -
  7. dsi_27260  3l:19132234-19132257 -
  8. 3l:23617701-23617724 -
  9. 3l:24079972-24079995 -
  10. 3l:24231769-24231792 -
  11. 4:494786-494809 -
  12. x:20313356-20313379 -
  13. node_57052:131-154 -
  14. node_36225:3661-3684 -
  15. node_15163:1235-1258 -
  16. node_35725:85-108 -
  17. node_57944:20443-20466 -
  18. node_39540:1335-1358 -
  19. node_79270:117-140 -
  20. node_34822:9054-9077 -
  21. dsi_19179  2l:21028292-21028315 -
  22. 2l:22305781-22305804 -
  23. 2l:23546028-23546051 -
  24. 2r:106418-106441 -
  25. 2r:138097-138120 -
  26. 2r:1143930-1143953 -
  27. 3l:22787113-22787136 -
  28. 3l:23710047-23710070 -
  29. 3l:23954054-23954077 -
  30. 3l:24112681-24112704 -
  31. dsi_8931  4:174988-175011 -
  32. node_66708:1587-1610 -
  33. node_3296:212-235 -
  34. node_92658:101-124 -
  35. node_1575:62-85 -
  36. node_59659:19368-19391 -
  37. node_32628:128-151 -
  38. node_50677:6951-6974 -
  39. node_38552:4527-4550 -
  40. node_6885:1081-1104 -
  41. 2l:20561271-20561294 +
  42. 2l:21539134-21539157 +
  43. 2l:21822725-21822748 +
  44. 2l:21860229-21860252 +
  45. 2l:23452447-23452470 +
  46. 2r:519369-519392 +
  47. 2r:881025-881048 +
  48. 2r:1149129-1149152 +
  49. 2r:1186312-1186335 +
  50. 2r:1856187-1856210 +
  51. 3l:22593732-22593755 +
  52. 4:112815-112838 +
  53. node_42303:7778-7801 +
  54. node_77409:2636-2659 +
  55. node_9846:931-954 +
  56. node_59659:234-257 +
  57. node_58966:5353-5376 +
  58. node_57071:1709-1732 +
  59. node_50677:3792-3815 +
  60. node_43743:1747-1770 +
  61. 2l:21485270-21485293 -
  62. 2r:1077764-1077787 -
  63. 2r:1378366-1378389 -
  64. 3l:22852363-22852386 -
  65. node_58476:591-614 -
  66. node_31339:603-626 -
  67. node_4957:238-261 -
  68. 2l:20974597-20974620 +
  69. 2l:22402827-22402850 +
  70. 2l:22936774-22936797 +
  71. 2l:23499349-23499372 +
  72. 2r:529645-529668 +
  73. 2r:2283567-2283590 +
  74. 3l:18112276-18112299 +
  75. 3l:22542188-22542211 +
  76. 3l:22958580-22958603 +
  77. 3l:23037464-23037487 +
  78. 3l:23813658-23813681 +
  79. x:18588951-18588974 +
  80. x:19558559-19558582 +
  81. x:20534593-20534616 +
  82. node_51319:1042-1065 +
  83. node_124396:1322-1345 +
  84. node_6609:590-613 +
  85. node_54872:9322-9345 +
  86. node_21290:597-620 +
  87. node_55064:674-697 +
  88. 2l:22039399-22039422 +
  89. 3l:23173836-23173859 +
  90. 3l:23630383-23630406 +
  91. 3l:24092654-24092677 +
  92. 4:274019-274042 +
  93. x:19555335-19555358 +
star

Sense Strand Reads

TCAATACTGAACAGAGTGACAATCTATTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGGGAGAACACCGATTTAGACTTCAGAATGTAAAACTTTAAAAATTGGCTATACTTTTTAATGCCATAACAAATGATTCTTCCAAAGACACCAGAATAACAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTAGGGCCGGCTCTAGAGGTGTCTCCTGGCTCTTTTGAATTTTTGTTTAA
*******************************************************....((((......((..((((....((((((((................((((.............)))).........))))).............))).....))))..))....))))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 SRR902008
ovaries
 GSM343915
embryo
 M053
female body
 SRR902009
testis
 M024
male body		 M025
embryo
.........................................................................................................................................................GAATAACAAGATGCGTAACGCCAT......................................................................... 24 0 20 67.95 1359 1008 339 0 2 0 0 0 10 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCC........................................................................... 18 0 20 18.95 379 318 61 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCCATACGA..................................................................... 25 0 20 4.50 90 0 0 90 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TAACGCCATACGATTTTTTTGCACACGA...................................................... 28 0 3 3.67 11 0 0 3 2 5 1 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCCATACGATT................................................................... 27 0 20 2.50 50 39 0 0 0 3 7 0 0 0 1 0 0 0
...........................................................................................................................................................................................TGCACACGATTTTTTAGGGCCGGCT...................................... 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................AACGCCATACGATTTTTTTGCACACGA...................................................... 27 0 3 1.67 5 0 0 2 3 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCCATACGAT.................................................................... 26 0 20 1.35 27 0 0 27 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GAATAACAAGATGCGTAACGCCATACGA..................................................................... 28 0 20 1.25 25 0 0 4 21 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ACGCCATACGATTTTTTT.............................................................. 18 0 9 1.11 10 10 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................ACACTTCAGACTGTAAAACT......................................................................................................................................................... 20 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................CAAAGTGGGAGAACACCGATTT............................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....TACTGAACAGAGTGACAATCTAGTCA............................................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCC........................................................................... 19 0 20 0.50 10 0 10 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCAGACTGTAAAACT......................................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................GAATAACAAGATGCGTAACGCCATACG...................................................................... 27 0 20 0.45 9 0 9 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GAATAACAAGATGCGTAACGCC........................................................................... 22 0 20 0.45 9 0 7 0 0 0 0 0 0 0 0 2 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGAT.................................................................... 25 0 20 0.35 7 0 0 0 1 0 0 0 0 6 0 0 0 0
...........................................................................................................................................................................CGCCATACGATTTTTTTGCACACGA...................................................... 25 0 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTTTTTGCACACAATTTTTTTCGGC........................................... 26 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACAAGATGCGTAACGCCATACGAT.................................................................... 24 0 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGCGTAACGCCATACGATTTTTTTGCACA......................................................... 29 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................GAATAACAAGATGCGTAACGCCATAC....................................................................... 26 0 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTTTTTGCACACGATT.................................................... 17 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTTTTTGCACACGATT.................................................... 16 0 15 0.20 3 0 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATGCGTAACGCCATACGATTT.................................................................. 21 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGATGCGTAACGCCATA........................................................................ 17 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACGATTTTTTTGCACACGATTTT.................................................. 24 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTTTTTGCACACGATTTTTTTGG............................................. 24 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CCAGAATAACAAGACGCGTAACGCCATA........................................................................ 28 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTTTGCACACGATT.................................................... 15 0 17 0.18 3 0 3 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGCGTAACGCCATACGATTTTTTTGCA........................................................... 27 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTTTTTGCACACGATTTTTTTGG............................................. 23 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AATAAGATGAGTAACGCCATACGATT................................................................... 26 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATACGTAACGCCATACGA..................................................................... 25 1 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCTATACGAT.................................................................... 25 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACCAAGATGCGTAACGCCATACGAT.................................................................... 25 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCCGTACGA..................................................................... 25 1 20 0.15 3 0 0 0 0 2 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTTTGCACACGATTTT.................................................. 17 0 14 0.14 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTTGCACACGATTTTTTTGG............................................. 20 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCCATACGATTTTTTTGCACACGA...................................................... 24 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TCCAAAGACACAAGAATAACAAGATGCGT................................................................................. 29 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TAACGCCATACGATTTTTTTGCACACGT...................................................... 28 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................AGAATAACAAGATGCGTAACGCCA.......................................................................... 24 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 2 0 0
..............................................................................................................................................................ACAAGATGCGTAACGCCATACGATT................................................................... 25 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGTTGCGTAACGCCATACGAT.................................................................... 25 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGATTTTT................................................................ 29 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CAACAAGATGCGTAACGCCATACGAT.................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAATAAGATGCGTAACGCCATACGAT.................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AGGATGCGTAACGCCATACGAT.................................................................... 22 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAGATGCGTAACGCCA.......................................................................... 16 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACGATTTTTTTGCACACAATTTTTT................................................ 26 1 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................CCACCATCAAAGGTA..................................................................................................................................................................................................... 15 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GAATAACAAGAAGCGTAACGCCATACGA..................................................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGA..................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................TAACAAGATACGTAACGCCATACGATTTT................................................................. 29 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................AGATGCGTAACGCCATACGATTTTT................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACCAAGATGCGTAACGCCATACGATT................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACAAGATGCGTAACGCCAGACGATT................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................GAATAACAAGATGCGTAACGCCATACGAT.................................................................... 29 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAATAAGATGCGTAACGCCATACGATT................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGCT.................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................GCATAACAAGATGCGTAACGCCATA........................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGCTGCGTAACGCCATACGATT................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................GTGATGCTTCCAAAGAC..................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................CACAAGATGCGTAACGCCATACGAT.................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTGACGCCATACGATT................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTTTTTGGCCACGATTTTT................................................. 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................TAACAAGATGCGTAACGCCATACGATTT.................................................................. 28 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCGTACG...................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AATAACAAGATGCGTAACGCCA.......................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................ATTCAGACTGTAAAACT......................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGAC.................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGATGCGTAACGCCATACG...................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GAACAAGATGCGTAACGCCATACGATT................................................................... 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGACT................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCATAACGCCATACGAT.................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCCATACGATA................................................................... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACCAGGATGCGTAACGCCATACGATT................................................................... 26 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAACAAGATGCGTAACGCTATACGATT................................................................... 27 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................CTAACAAGATGCGTAACGCCATACGATT................................................................... 28 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGAATAATAAGATGAGTAACGCCA.......................................................................... 24 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................AAGATGCGTAACGCCATACGATTT.................................................................. 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGATTA.................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TAGCAAGATGCGTAACGCCATACGAT.................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GTAACAAGATGCGTAACGCCATACGAT.................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................AACAAGGTGCGTAACGCCATACGATTT.................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAAGATGCGTAACGCCATACGATCT.................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCACAAGATGCGTAACGCCATACGAT.................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGTTATGACTTGTCTCACTGTTAGATAAGTAGGAGTCCGCTGGTAGTTTCCATACGTTTCACCCTCTTGTGGCTAAATCTGAAGTCTTACATTTTGAAATTTTTAACCGATATGAAAAATTACGGTATTGTTTACTAAGAAGGTTTCTGTGGTCTTATTGTTCTACGCATTGCGGTATGCTAAAAAAACGTGTGCTAAAAAATCCCGGCCGAGATCTCCACAGAGGACCGAGAAAACTTAAAAACAAATT
*************************************************************************....((((......((..((((....((((((((................((((.............)))).........))))).............))).....))))..))....))))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 O002
Head
 M024
male body		 M053
female body
..................................................................................................................................................................CTACGCATTGCGGTATGCTAAA.................................................................. 22 0 20 11.75 235 0 188 0 0 0 0 0 0 47 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGT......................................................... 24 0 4 5.50 22 8 0 4 9 0 0 1 0 0 0 0
.................................................................................................................................................................TCTACGCATTGCGGTATGCTA.................................................................... 21 0 20 5.30 106 0 106 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGTGT......................................................... 25 0 4 4.25 17 4 0 7 2 0 3 0 1 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTGT....................................................... 26 1 4 3.00 12 6 0 4 1 0 1 0 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGTGTGT....................................................... 27 1 4 2.75 11 6 0 4 0 0 0 0 1 0 0 0
......................................................................................................................................................................GCATTGCGGTATGCTAAAAAAACGTGT......................................................... 27 0 4 2.75 11 9 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................ACGCATTGCGGTATGCTAAA.................................................................. 20 0 20 2.45 49 0 49 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCTACGCATTGCGGTATGCTAA................................................................... 22 0 20 2.40 48 0 48 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AAGGTTTCTGTGGTCTTATTGTTC....................................................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................AGGTTTCTGTGGTCTTATTGTTC....................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GGTTTCTGTGGTCTTATTGTTC....................................................................................... 22 0 3 1.67 5 0 0 0 0 2 1 0 2 0 0 0
....................................................................................................................................................................ACGCATTGCGGTATGCTAAAAAAACGTGT......................................................... 29 0 4 1.50 6 5 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................GGTTTCTGTGGTCTTATTGTTCTAC.................................................................................... 25 0 3 1.33 4 2 0 0 0 0 1 1 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAA............................................................... 19 0 20 1.25 25 0 0 0 0 25 0 0 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGTGTGTT...................................................... 28 1 4 1.00 4 2 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................CTGTGGTCTTATTGTTCTACG................................................................................... 21 0 3 1.00 3 0 0 0 0 0 0 3 0 0 0 0
.........................................................................................................................................AGAAGGTTTCTGTGGTCTTATTGTTC....................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTG........................................................ 25 0 4 1.00 4 1 0 3 0 0 0 0 0 0 0 0
............................GTAGGAGTCCGCTGGTAGTT.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................ATGCTAAAAAAACGTGTGCTAAAAAAT............................................... 27 0 2 1.00 2 0 0 0 0 0 2 0 0 0 0 0
..............................AGGAGTCCGCTGGTAGTTTCCATACGT................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................AGGAGTCCGCTGGTAGTTTCCATACGTT................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TGCGGTATGCTAAAAAAACGTGTGT....................................................... 25 1 5 0.80 4 1 0 3 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CATTGCGGTATGCTAAAAAAACGTGT......................................................... 26 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CATTGCGGTATGCTAAAAAAAC............................................................. 22 0 7 0.71 5 0 0 0 0 5 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTGCTA..................................................... 28 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGTGTGCT...................................................... 28 0 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTGCT...................................................... 27 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CATTGCGGTATGCTAAAAAA............................................................... 20 0 20 0.65 13 0 0 0 0 13 0 0 0 0 0 0
..........................................................................................................................................................................TGCGGTATGCTAAAAAAACGTGTGTT...................................................... 26 1 5 0.60 3 2 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TAGGTTTCTGTGGTCTTATTGTTCTAC.................................................................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................GGTTTCTGTGGTCTTATTGTT........................................................................................ 21 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................GTTTCTGTGGTCTTATTGTTCTAC.................................................................................... 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TAGGTTTCTGTGGTCTTATTGTTC....................................................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................CTGTGGTCTTATTGTT........................................................................................ 16 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................CAGGTTTCTGTGGTCTTATTGTTC....................................................................................... 24 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................CTACGCATTGCGGTATGCTAAAAAAACGT........................................................... 29 0 6 0.33 2 0 0 0 0 0 1 0 0 0 0 1
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGTGTGC....................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GCGGTATGCTAAAAAAACGTGTGCT...................................................... 25 0 6 0.33 2 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAAC............................................................. 21 0 7 0.29 2 0 0 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTGAT...................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTGTTA..................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTGCGGTATGCTAAAAAAACGTGTGT....................................................... 27 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGTGTGTT...................................................... 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGCATTGCGGTATGCTAAAAAAACGTGT......................................................... 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTCTGTGGTCTTATGGTTCTACG................................................................................... 23 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................AATTGCGGTATGCTAAAAAA............................................................... 20 1 20 0.25 5 0 0 0 0 5 0 0 0 0 0 0
......................................................................................................................................................................TTATTGCGGTATGCTAAAAAAACGTGT......................................................... 27 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTGCGGTATGCTAAAAAAACGTGT......................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATGCTAAAAAAACGTGTGCTAAAAA................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GGTTTCTGTGGTCTTA............................................................................................. 16 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................AAAAAAACGCCTGCTAAAAGAT............................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................ATATTGCGGTATGCTAAAAAAACGTGT......................................................... 27 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGTG.......................................................... 24 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................CATTGCGGTATGCTAAAAAAACGT........................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TACGCATTGCGGTATGCTAAAAAAACGT........................................................... 28 0 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................ATTGCGGTATGCTAAAAAAACGT........................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTCTGTGGTCTAATTGTTCTAC.................................................................................... 22 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................TCTACGCATTGCGGTAGGCTAAAAAAACGT........................................................... 30 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GCGGTATGCTAAAAAAACGTGTGCTAA.................................................... 27 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGT........................................................... 22 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAATTGCGGTATGCTAAAAAAACGTGTGT....................................................... 29 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGGTATGCTAAAAAAACGA........................................................... 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GCGGTATGCTAAAAAAACGTGTGTT...................................................... 25 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................TCATTGCGGTATGCTAAAAAAACGT........................................................... 25 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................AGATGGTTTCTGTGGTCTTATTGTTC....................................................................................... 26 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................AATTGCGGTATGCTAAAAAAACGT........................................................... 24 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................CATTGCGGTATGCTAAAAACA.............................................................. 21 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................CTGCAGTCTGACATCTTGA......................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................ATGTTAAAAAAACGTGTGCTAAAAA................................................. 25 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................CGGTATGCTAAAAAAACTTGTGCT...................................................... 24 1 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................CTACTCATTGCGGTATGCTAAAAAA............................................................... 25 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAATTGCGGTATGCTAAAAAAACGT........................................................... 25 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................ATTTGCGGTATGCTAAAAAAACGTGT......................................................... 26 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTAGGTTTCTGTGGTCCT.............................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................CGGTTTCTGTGGTCTTATTGTTCTAC.................................................................................... 26 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................GCGGTATGCTAAAAAAACGTGT......................................................... 22 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................GCGGTATGCTAAAAAAACGTGTGT....................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAAAAAAGGTGTGCTATAAA................................................. 20 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................CGGTATGCTAAAAAAACGTGTGT....................................................... 23 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGTATGCTAAAAAAACGTGT......................................................... 20 0 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0
......................AGATAAGTAGGAGTCTC................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................TTACGCATGGCGGTATGCTAAAAAAACGT........................................................... 29 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................CGGCATGCTAAAAAAACGTATGCGAAAA.................................................. 28 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGTATGCTAAAAAAACGT........................................................... 18 0 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................GCAGTCTGACATCTTGAAA....................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................GGCATGCTAAAAAAACGTAT......................................................... 20 2 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................GTTTCTGTGGTTTTATCGTTCTAC.................................................................................... 24 2 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TATTGCGGTATGCTAAAAAA............................................................... 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................GCTGAAAAAAAGTGTGC....................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................CGCATTGCGGTATGCTAAAAAA............................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGGAGGACCGAGAAGACT............ 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................AAAAATTACGGTATC......................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GCATTGCGGTATGCTA.................................................................... 16 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................TACGCATTGCGGTATGCTAAA.................................................................. 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:21028219-21028468 - dsi_19179 TC----------AA-TACTGAACAGAGTGACAATCTATTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGG------GAGAACACCGATTTAGACTTCAGAATGTAAAACTTTAAAA--------ATT----------GG-----CTATACTTTTTAAT----------------GCC-----ATAACAAATG------------------ATTCTTCCAAAGACACCAGA-----ATAA-CAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTAGGGCCGGCTCTAGAGGTGTCTCCTGGCTCTTTTGAATTTTTGTTTAA
droSec2 scaffold_28:293472-293731 - TC----------AA-TACTGAACAGAGTGACAATCTAGTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGG------GACAACACCGATTTAGACTTCACAATGTTAAATTTTAAAA--------ATTGGATTTTATTGG-----CTATACTTTTTAAT----------------GCC-----ATAACAAATG------------------ATTCTTCCAAAGACACCAGA-----ATAA-CAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTAGGGCCGGCTCTAGAGGTGTCTCCTGGCTCTTTTGAATTTTTGTTTAA
dm3 chr2L:21745963-21746201 - TA----------AA-TACTGAACAGAGTGACAATCTAGTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGG------GGCAACACCGACTTACATTTTACAATGTAAAATGTTAAAA--------ATGGGATTTTATTGG-----CTATATTTTTTAAT----------------GGC-----GTAAAGAATGATTTTTCCT--------TGTACTACCAAAGAGACTATA-----ATAA-CAAGATGAGTAACGCCATACGATTTTTTTGCT-------------------------------CCCCTGGCTCTCTCGAATTTTTGTTCAA
droEre2 scaffold_4784:19528129-19528280 + CG----------GAATGGCATACT--------------------------------------------------------------------------------------------------TTAC-----------------AGGGTCTATACTT-------------C---------------------GCACC------------------ATTTAACCAAAGACACTAGA-----ATAA-TAAGATGCGTAACGCCATACGATTTTTTTGCACACGTTTTTTTCGGGCTGGCTCTAGAGCTGGCTCCATGCTCTCTCGAATTTTTCTTCAA
droYak3 v2_chrUn_5726:953-1136 + AG----------CA-TAGCTAATTGCATTCCAAAG----------------------------------------------------------------------TGCATGATTTTGCAA--------AAAGTACATAATATG---------------------TTAAGC----------------GCAAGAAAT-------------------GTGAAGTCAAAGACATTAGA-----ATAA-CAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTCGTGGTGGCTTTTCAAGTGGCTTTTCGCTCTCTCGAAATTTTATTCAA
droEug1 scf7180000409752:176398-176461 - GC----------AA-TGCGGAGCAGAGCGGCAATCTGGTCATCCTCAGGCGGCCGGGAAAGGTATGCAAAGTGG------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301495:951264-951418 + AG----------AA-TATAAATAAAAA---------------------------------------------------------------------------------------------ATTTAC-----------------A--------------TATAAGTATTTG---------------------C----------CGCTACACGTGGGACGTACCAAAGACATTAGA-----ATAT-GAAGATAAATAACGCCATACGATTTTTTTGCACACGATTTTTTGGTGCTGGCTCTAGAGCTGGCTCCAGGCTCTCT--------TGCTGAA
droTak1 scf7180000415454:33048-33201 - TTTGAAAATTTGATATGA------------------------------------------------------------------------------------------------------------------------------------------------CGTTCATCACATCGAT-----ATAAAAAACTTT------------------TGTTCTACCAAAGACATTAGA-----ATAT-GAAGATGGATAACGCCATACGATTTTTTTGCACACAATTATTTGGTGCTGGCTCTAGAGCTGGCTCCAGGCTCTCT--------TGCTCAA
droEle1 scf7180000490970:938823-938923 + GC----------AA-TGCGGAGCAGTGTGGCAATCTAGTGATCCTCAGGCGACCGGGAAAGGTATGCGGGGTGG------GAAGGAACCGGGGAA-----CAGCATCTCACATTTCAAAA--------GTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000769067:654-837 + AA----------AG-CAACGCAGTGAA----------------------------------------------G------GAGA----CAGTTCAGACCCCATAAAGTATACATATATA-TTT-------------------------------TTTTTATCAGCATCTG---------------------TCACC------------------GTCTGTCCAAAGAC--CAAT-ATAAACTC-TAAGATGCGTAACGCCATACGATTTTTTTGCACACGAATTTTTTGTGCTGGCTTTTCAACTGGCTTTTCGCTCTC---------TGCCCAA
droFic1 scf7180000453973:508230-508294 + GC----------AA-CGCGGAGCAGAGTGGCAGCCTGGTGATCCTCAGGCGGCCAGGAAAGGTATGCAGCGGGG------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droKik1 scf7180000298871:9319-9481 + TT----------CA-GAATTAA------------------------------------------------------------------------------------GTTAAAT------AATTAAC-----------------A------ATG---------CGTTTAGG---------------------T----------TGTCAGACTT-AGTTGAACCAAAGACAATAGA-----GCTA-TAAGATAAGTAACGCCATACGATTTTTTTGCACACGATTTTTTCGTGCTGGCTTTTGAACTGGCTCCAGGCTCTCTTAAA-TTTTGTTCAA
droAna3 scaffold_12916:9342570-9342662 - GC----------AA-TGCGGAGCAGAGTGGCAATGTGGTGATACTCCGGCGACCCGGAAAGGTATGCCTCAGGAAGGGGGGACTCTATCTATGCACATTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA
droBip1 scf7180000396535:1912657-1912714 - GC----------AA-TGCGGAGCAGAGTGGCAATGTGGTGATCCTCCGGCGACCCGGAAAGGTATGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
dp5 XL_group3a:1956154-1956266 - CA----------AA-GACAATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATACATAG-TAAGATGAGTAGCGCCATACAAATTTTTTGTACTTGATTTTTTCTGCCTGGCTTCAGAGCTGGCTCCAGGCTTTCTTAAAATTTTGTTCAA
droPer2 scaffold_11159:433-595 + AA----------CT------------------------------------------------------------------------------------------------------------TTAAAAAAA-------------------------------GGTATTTTTCATTGATCCCCAATGAAAAATAATG------------------AAATAAGCGAAGATAATATGA----GTAAGTAAGATGAGTAACGCCATACAAATTTTTTGTACTTGAATTTTCTG-ACCGGCTCAAGAGCTGACTCCAGGCTCTCTTGAAATTTTGTTCAA
droVir3 scaffold_12963:5619155-5619203 + AC----------AA-TGCTGAACAGAG---CAGTGTCGTCATACTGAGGCGACCG---CAGGTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:16987376-16987424 - AC----------AA-TGCGGAGCAGAG---CAATGTCGCCATCCTGAGGCGACCG---CAGGTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:8215248-8215287 + AC----------AA-TGCCGAGCTAAGC------------------AAAGAGCCACCAAAGGTATGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TC----------AA-TACTGAACAGAGTGACAATCTATTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGG------GAGAACACCGATTTAGACTTCAGAATGTAAAACTTTAAAA--------ATT----------GG-----CTATACTTTTTAAT----------------GCC-----ATAACAAATG------------------ATTCTTCCAAAGACACCAGA-----ATAA-CAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTAGGGCCGGCTCTAGAGGTGTCTCCTGGCTCTTTTGAATTTTTGTTTAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCCAT.........................................................................242067.95135900001008002003390100000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCC...........................................................................182018.9537900003180000061000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGA.....................................................................25204.5090000000900000000000
.............................................................................................................................................................................................................................................................TAACGCCATACGATTTTTTTGCACACGA......................................................2833.671100000032150000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGATT...................................................................27202.5050000139000730000000
................................................................................................................................................................................................................................................................................TGCACACGATTTTTTAGGGCCGGCT......................................2512.00200000000200000000
..............................................................................................................................................................................................................................................................AACGCCATACGATTTTTTTGCACACGA......................................................2731.67500000023000000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGAT....................................................................26201.3527000000270000000000
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCCATACGA.....................................................................28201.2525000000421000000000
...............................................................................................................................................................................................................................................................ACGCCATACGATTTTTTT..............................................................1891.1110000010000000000000
..................................................................CAAAGTGG------GAGAACACCGATTT.................................................................................................................................................................................................................................................2211.00100000100000000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCC...........................................................................19200.5010000000000010000000
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCCATACG......................................................................27200.45900000000009000000
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCC...........................................................................22200.45900000000007002000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGAT....................................................................25200.35700000001000600000
................................................................................................................................................................................................................................................................CGCCATACGATTTTTTTGCACACGA......................................................2560.33200000020000000000
..................................................................................................................................................................................................................................................A-CAAGATGCGTAACGCCATACGAT....................................................................24200.30600000000006000000
.........................................................................................................................................................................................................................................................TGCGTAACGCCATACGATTTTTTTGCACA.........................................................2940.25100000000010000000
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCCATAC.......................................................................26200.25500000000005000000
..........................................................................................................................................................................................................................................................................TTTTTTTGCACACGATT....................................................1790.22200000000002000000
...........................................................................................................................................................................................................................................................................TTTTTTGCACACGATT....................................................16150.20300000000003000000
........................................................................................................................................................................................................................................................ATGCGTAACGCCATACGATTT..................................................................21200.20400000000004000000
......................................................................................................................................................................................................................................................AGATGCGTAACGCCATA........................................................................17200.20400000000004000000
.....................................................................................................................................................................................................................................................................TACGATTTTTTTGCACACGATTTT..................................................2450.20100000000100000000
............................................................................................................................................................................................................................................................................TTTTTGCACACGATT....................................................15170.18300000000003000000
.........................................................................................................................................................................................................................................................TGCGTAACGCCATACGATTTTTTTGCA...........................................................2760.17100000001000000000
............................................................................................................................................................................................................................................................................TTTTTGCACACGATTTT..................................................17140.14200000000002000000
.................................................................................................................................................................................................................................................................GCCATACGATTTTTTTGCACACGA......................................................2470.14100000010000000000
.............................................................................................................................................................................................................................................................TAACGCCATACGATTTTTTTGCACACGT......................................................2880.13100000000010000000
.......................................................................................................................................................................................................................................AGA-----ATAA-CAAGATGCGTAACGCCA..........................................................................24200.10200000000000002000
..................................................................................................................................................................................................................................................A-CAAGATGCGTAACGCCATACGATT...................................................................25200.10200000000002000000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGATTTTT................................................................29200.10200000000002000000
.....................................................................................................................................................................................................................................................AAGATGCGTAACGCCA..........................................................................16200.10200000000002000000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGA.....................................................................24200.05100000000000100000
......................................................................................................................................................................................................................................................AGATGCGTAACGCCATACGATTTTT................................................................25200.05100000000001000000
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCCATACGAT....................................................................29200.05100000000001000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGATTT..................................................................28200.05100000000010000000
.........................................................................................................................................................................................................................................A-----ATAA-CAAGATGCGTAACGCCA..........................................................................22200.05100010000000000000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGAC....................................................................25200.05100000000001000000
......................................................................................................................................................................................................................................................AGATGCGTAACGCCATACG......................................................................19200.05100000000001000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGATA...................................................................27200.05100000000010000000
.....................................................................................................................................................................................................................................................AAGATGCGTAACGCCATACGATTT..................................................................24200.05100000000001000000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGATTA..................................................................27200.05100000000001000000
droSec2
TC----------AA-TACTGAACAGAGTGACAATCTAGTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGG------GACAACACCGATTTAGACTTCACAATGTTAAATTTTAAAA--------ATTGGATTTTATTGG-----CTATACTTTTTAAT----------------GCC-----ATAACAAATG------------------ATTCTTCCAAAGACACCAGA-----ATAA-CAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTAGGGCCGGCTCTAGAGGTGTCTCCTGGCTCTTTTGAATTTTTGTTTAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGATT...................................................................26202.855700525
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCAT.........................................................................21201.653300033
.............A-TACTGAACAGAGTGACAATCTAGT........................................................................................................................................................................................................................................................................................................2511.0010010
........................................................................................................................................................................................................................................GA-----ATAA-CAAGATGCGTAACGCCATA........................................................................25200.0511000
dm3
TA----------AA-TACTGAACAGAGTGACAATCTAGTCATCCTCAGGCGACCATCAAAGGTATGCAAAGTGG------GGCAACACCGACTTACATTTTACAATGTAAAATGTTAAAA--------ATGGGATTTTATTGG-----CTATATTTTTTAAT----------------GGC-----GTAAAGAATGATTTTTCCT--------TGTACTACCAAAGAGACTATA-----ATAA-CAAGATGAGTAACGCCATACGATTTTTTTGCT-------------------------------CCCCTGGCTCTCTCGAATTTTTGTTCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGAT....................................................................261233.253990000000000000000000000500000010000001001111030501182500000010000000000000000000000100030000000000000000000010001000000000000000000000000000011151131065715450000000000000000000000100000000001722040106600000015000010000281141310210000000000000100000000000000000000000000000000000000000000000000001001553120011008100000000000000141644000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGA.....................................................................251216.581990000001100000000000001000000000000000000102011101042000001213000000000000000000000034111400000000130000011000000010004000000000000000000000000321143241200120000000000000000000000000000000000100010010000000020000000006460132210020000000000000000000000000000000000000000000000000000000000000000014121011000331000000000000003646000002
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACG......................................................................24129.2511100000000000000000000001000000000000000001100000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011200013310230000000000000000000000100000000002223020037000000000000000004252100020100000000000001000000000000000000000000000000000000000000000001000015531020200200000000000000012312000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGATT...................................................................27126.08730000000000000000000000100000000000000002200000000220110001000000000000000000000000200000000000000000000000000000000000000000000000000000000060011221122130100000000000000000000000000000000001201000030000012100000000372000000010000000000001000000000000000000000000000000000000000000000000000022210000000210000000000000000100000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCC...........................................................................19122.252700000000000000000000001000000000000000000000010000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011001010000000000000000000000000000000000000000000000000000000000020000000100200000000000000000000000000000000000000000000000000000000000000000000000000102000000001000000000000000100000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATA........................................................................22122.17260000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000002000110000000000000000000000000000001000000000000001000000000004000000081000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000001000000000
.....................................GTCATCCTCAGGCGACCATCA.....................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATCTAGTCATCCTCAGGCGACCATCA.....................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATAC.......................................................................23121.50180000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000050200000000000000000000000001000000000000000100000000000000002030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCAT.........................................................................21121.25150000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000070000000000000000000000000000000000000000000000000000000000000001100000000001000000000000000000000000000000100200
...............TACTGAACAGAGTGACAATCTAGTCA......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTTTTTGCT-------------------------------CCCCTGGCTCTCTCGAA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATCCTCAGGCGACCATCAAAG..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................TTTTTTTGCT-------------------------------CCCCTGGCTCTCTCGA............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGTCATCCTCAGGCGACCATCAAA...................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGAGACTATA-----ATAA-CAAGA......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................ACTGAACAGAGTGACAATCTA..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TATGCAAAGTGG------GGCAACACCGACT..................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................AGTGACAATCTAGTCATCCTCAGGCGA...........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................TTTTTTTGCT-------------------------------CCCCTGGCTCT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TAAT----------------GGC-----GTAAAGAATGATTT.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................AGGTATGCAAAGTGG------GGC............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.A----------AA-TACTGAACAGAGTGACAATCTAG.........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GAACAGAGTGACAATCTAGT........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............AA-TACTGAACAGAGTGACAATCTAGT........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................CAAAGGTATGCAAAGTGG------GGC............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................CAATCTAGTCATCCTCAGGCGACCATC......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGC............................................................................18120.83100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000210000000000000000000000000000000000000000000002000000000001000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGATTT..................................................................28110.6470000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCA..........................................................................20120.5060000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................T-------------------------------CCCCTGGCTCTCTCGAATTTTTGTT...2620.5010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGT.....................................................................25170.2950000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGATC...................................................................27120.2530000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGAA....................................................................26120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGATA...................................................................27140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACG.............................................................................17160.1930000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATAA-CAAGATGAGTAACGCCA..........................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AA-CAAGATGAGTAACGCCATACGATT...................................................................26120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
.....................................................................................................................................................................................................................................................AAGATGAGTAACGCCATACGAT....................................................................22120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................A-CAAGATGAGTAACGCCATACGAT....................................................................24120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................AAGATGAGTAACGCCATACG......................................................................20120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGAG....................................................................26120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000
.........................................................................................................................................................................................................................................A-----ATAA-CAAGATGAGTAACGCC...........................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACC......................................................................24130.1520000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGAAA...................................................................27140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCATACGATTTT.................................................................29110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................A-----ATAA-CAAGATGAGTAACGCCATACGAT....................................................................28120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGATGAGTAACGCCATACGATT...................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AA-CAAGATGAGTAACGCCATACGAT....................................................................25120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................AA-CAAGATGAGTAACGCCAT.........................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATAA-CAAGATGAGTAACGCC...........................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GATGAGTAACGCCATACGAT....................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................ATGAGTAACGCCATACGAT....................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ATGAGTAACGCCATACGATT...................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATAA-CAAGATGAGTAACGCCATACGA.....................................................................26120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGATGAGTAACGCCATACGAT....................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AAGATGAGTAACGCCATACGA.....................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................TGAGTAACGCCATACGAT....................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CAAGATGAGTAACGCCATACG......................................................................21120.0810000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CAAGATGAGTAACGCCATACGAT....................................................................23120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................TAA-CAAGATGAGTAACGCCAG.........................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
droEre2
CG----------GAATGGCATACT--------------------------------------------------------------------------------------------------TTAC-----------------AGGGTCTATACTT-------------C---------------------GCACC------------------ATTTAACCAAAGACACTAGA-----ATAA-TAAGATGCGTAACGCCATACGATTTTTTTGCACACGTTTTTTTCGGGCTGGCTCTAGAGCTGGCTCCATGCTCTCTCGAATTTTTCTTCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................TTTAACCAAAGACACTAGA-----ATAA-TAA........................................................................................2660.1710000100
.....................................................................................................................................................................................................................................................AAGATGCGTAACGCCATACGA.....................................................................21200.1020000002
.........................................................................................................................................................................................................................................................................................TTTTTTCGGGCTGGCTCTAGAGGC..............................24200.1020000002
................................................................................................................................................................................................................................................TAA-TAAGATGCGTAACGCC...........................................................................19200.0511000000
.....................................................................................................................................................................................................................................................AAGATGCGTAACGCCATACGC.....................................................................21200.0510000001
droYak3
AG----------CA-TAGCTAATTGCATTCCAAAG----------------------------------------------------------------------TGCATGATTTTGCAA--------AAAGTACATAATATG---------------------TTAAGC----------------GCAAGAAAT-------------------GTGAAGTCAAAGACATTAGA-----ATAA-CAAGATGCGTAACGCCATACGATTTTTTTGCACACGATTTTTTCGTGGTGGCTTTTCAAGTGGCTTTTCGCTCTCTCGAAATTTTATTCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................TAGA-----ATAA-CAAGATGCGTAACGCCATA........................................................................27201.3026022000040000
......................................................................................................................................................................................................................................TAGA-----ATAA-CAAGATGCGTAACGCC...........................................................................24201.1022002100010000
......................................................................................................................................................................................................................................TAGA-----ATAA-CAAGATGCGTAACGCCAT.........................................................................26200.7515011000040000
.....................................................................................................................................................................................................................................................................TACGATTTTTTTGCACACGATTTT..................................................24200.5511011000000000
.....................................................................................................................................................................................................................................................................TACGATTTTTTTGCACACGATTTTT.................................................25200.5511001100000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGAT....................................................................26200.5010000000100000
.......................TGCATTCCAAAG----------------------------------------------------------------------TGCATGATTTTG..........................................................................................................................................................................................................................2420.50101000000000
..........................................................................................................................................................................................................................................................................................................TTCAAGTGGCTTTTCGCTCTCTCGAAA..........27200.45909000000000
.....................................................................................................................................................................................................................................................................................................GGCTTTTCAAGTGGCTTTTCGCTCTC................26200.35707000000000
..........................................................................................................................................................................................................................................................................................................TTCAAGTGGCTTTTCGCTCTCTCGA............25200.35707000000000
........................................................................................................................................TAATATG---------------------TTAAGC----------------GCAAGAAAT-------------------GTGAAG...................................................................................................................2830.33100100000000
.....................................................................................................................................................................................................................................................................................................GGCTTTTCAAGTGGCTTTTCGCTCT.................25200.25501400000000
....................................................................................................................................................................TTAAGC----------------GCAAGAAAT-------------------GTGAAGT..................................................................................................................2240.25100100000000
....................................................................................................................................................................................................................................................................................................TGGCTTTTCAAGTGGCTTTTCGCTCT.................26200.15301200000000
..........................................................................................................................................................................................................................................................................................................TTCAAGTGGCTTTTCGCTCTCTCG.............24200.10202000000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGATTT..................................................................28200.10202000000000
...........................................................................................................................................................................................................................................................................TTTTTTGCACACGATTTT..................................................18200.10200200000000
........................................................................................................................................................................................................................................................................GATTTTTTTGCACACGATTTTTT................................................23200.05101000000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGATT...................................................................27200.05100100000000
..........................................................................................................................................................................................................................................................................................................TTCAAGTGGCTTTTCGCTCTCTCGAA...........26200.05101000000000
...........................................................................................................................................................................................................................................................................TTTTTTGCACACGATTTTTTCGTGGT..........................................26200.05101000000000
..............................................................................................................................................................................................................................................................AACGCCATACGATTTTTTTGC............................................................21200.05101000000000
.....................................................................................................................................................................................................................................................................TACGATTTTTTTGCACACGATC....................................................22200.05100100000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGT.....................................................................25200.05101000000000
..........................................................................................................................................................................................................................................................................TTTTTTTGCACACGATTTTTTCGTGGTG.........................................28200.05101000000000
........................................................................................................................................................................................................................................................................................................TTTTCAAGTGGCTTTTCGCTCTCTCG.............26200.05101000000000
....................................................................................................................................................................................................................................ATTAGA-----ATAA-CAAGATGCGTAACGCCA..........................................................................27200.05101000000000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCATACGAT....................................................................25200.05100010000000
................................................................................................................................................................................................................................................................................TGCACACGATTTTTTCGTGGT..........................................21200.05101000000000
.....................................................................................................................................................................................................................................................................................................GGCTTTTCAAGTGGCTTTTCGCTCTCT...............27200.05101000000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCAT.........................................................................21200.05100000010000
.............................................................................................................................................................................................................................................................................TTTTGCACACGATTTTTTCGTGGTGGC.......................................27200.05101000000000
.............................................................................................................................................................................................................................................................................................TTCGTGGTGGCTTTTCAAGTGGCTT.........................25200.05101000000000
.....................................................................................................................................................................................................................................................................................................GGCTTTTCAAGTGGCTTTTCGCT...................23200.05101000000000
.........................................................................................................................................................................................................................................A-----ATAA-CAAGATGCGTAACGCCATACGAT....................................................................28200.05101000000000
....................................................................................................................................................................................................................................................................................................TGGCTTTTCAAGTGGCTTTTCGCTCTCT...............28200.05101000000000
................................................................................................................................................................................................................................................TAA-CAAGATGCGTAACGCCATACGA.....................................................................25200.05100000010000
..........................................................................................................................................................................................................................................................................................................TTCAAGTGGCTTTTCGCTCTCTCTC............25200.05101000000000
...........................................................................................................................................................................................................................................................................................................TCAAGTGGCTTTTCGCTCTCTCGA............24200.05101000000000
...........................................................................................................................................................................................................................................................................................................TCAAGTGGCTTTTCGCTCTCTCGAA...........25200.05101000000000
.........................................................................................................................................................................................................................................................................................................TTTCAAGTGGCTTTTCGCTCTCTCGA............26200.05101000000000
..........................................................................................................................................................................................................................................................................................................TTCAAGTGGCTTTTCGCTCTCTCGAAATT........29200.05101000000000
......................................................................................................................................................................................................................................................................ACGATTTTTTTGCACACGATTTTT.................................................24200.05100100000000
....................................................................................................................................................................................................................................................................................................TGGCTTTTCAAGTGGCTTTTCGCTCTC................27200.05101000000000
......................................................................................................................................................................................................................................TAGA-----ATAA-CAAGATGCGTAACGCCATAC.......................................................................28200.05100100000000
.........................................................................................................................................................................................................................................A-----ATAA-CAAGATGCGTAACGCCATACG......................................................................26200.05101000000000
.................................................................................................................................................................................................................................................AA-CAAGATGCGTAACGCCAT.........................................................................20200.05100000010000
......................................................................................................................................................................................................................................................................ACGATTTTTTTGCACACGATTTTTT................................................25200.05100100000000
.............................................................................................................................................................................................................................................................................................................AAGTGGCTTTTCGCTCTCT...............19200.05101000000000
droEug1
GC----------AA-TGCGGAGCAGAGCGGCAATCTGGTCATCCTCAGGCGGCCGGGAAAGGTATGCAAAGTGG------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AG----------AA-TATAAATAAAAA---------------------------------------------------------------------------------------------ATTTAC-----------------A--------------TATAAGTATTTG---------------------C----------CGCTACACGTGGGACGTACCAAAGACATTAGA-----ATAT-GAAGATAAATAACGCCATACGATTTTTTTGCACACGATTTTTTGGTGCTGGCTCTAGAGCTGGCTCCAGGCTCTCT--------TGCTGAASizeHit CountTotal NormTotal
No Reads
droTak1
TTTGAAAATTTGATATGA------------------------------------------------------------------------------------------------------------------------------------------------CGTTCATCACATCGAT-----ATAAAAAACTTT------------------TGTTCTACCAAAGACATTAGA-----ATAT-GAAGATGGATAACGCCATACGATTTTTTTGCACACAATTATTTGGTGCTGGCTCTAGAGCTGGCTCCAGGCTCTCT--------TGCTCAASizeHit CountTotal NormTotal
No Reads
droEle1
GC----------AA-TGCGGAGCAGTGTGGCAATCTAGTGATCCTCAGGCGACCGGGAAAGGTATGCGGGGTGG------GAAGGAACCGGGGAA-----CAGCATCTCACATTTCAAAA--------GTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AA----------AG-CAACGCAGTGAA----------------------------------------------G------GAGA----CAGTTCAGACCCCATAAAGTATACATATATA-TTT-------------------------------TTTTTATCAGCATCTG---------------------TCACC------------------GTCTGTCCAAAGAC--CAAT-ATAAACTC-TAAGATGCGTAACGCCATACGATTTTTTTGCACACGAATTTTTTGTGCTGGCTTTTCAACTGGCTTTTCGCTCTC---------TGCCCAASizeHit CountTotal NormTotal
No Reads
droFic1
GC----------AA-CGCGGAGCAGAGTGGCAGCCTGGTGATCCTCAGGCGGCCAGGAAAGGTATGCAGCGGGG------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
TT----------CA-GAATTAA------------------------------------------------------------------------------------GTTAAAT------AATTAAC-----------------A------ATG---------CGTTTAGG---------------------T----------TGTCAGACTT-AGTTGAACCAAAGACAATAGA-----GCTA-TAAGATAAGTAACGCCATACGATTTTTTTGCACACGATTTTTTCGTGCTGGCTTTTGAACTGGCTCCAGGCTCTCTTAAA-TTTTGTTCAASizeHit CountTotal NormTotal
No Reads
droAna3
GC----------AA-TGCGGAGCAGAGTGGCAATGTGGTGATACTCCGGCGACCCGGAAAGGTATGCCTCAGGAAGGGGGGACTCTATCTATGCACATTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GC----------AA-TGCGGAGCAGAGTGGCAATGTGGTGATCCTCCGGCGACCCGGAAAGGTATGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dp5
CA----------AA-GACAATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATACATAG-TAAGATGAGTAGCGCCATACAAATTTTTTGTACTTGATTTTTTCTGCCTGGCTTCAGAGCTGGCTCCAGGCTTTCTTAAAATTTTGTTCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AA----------CT------------------------------------------------------------------------------------------------------------TTAAAAAAA-------------------------------GGTATTTTTCATTGATCCCCAATGAAAAATAATG------------------AAATAAGCGAAGATAATATGA----GTAAGTAAGATGAGTAACGCCATACAAATTTTTTGTACTTGAATTTTCTG-ACCGGCTCAAGAGCTGACTCCAGGCTCTCTTGAAATTTTGTTCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droVir3
AC----------AA-TGCTGAACAGAG---CAGTGTCGTCATACTGAGGCGACCG---CAGGTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................AGAG---CAGTGTCGTCATACTGAGGC.............................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
AC----------AA-TGCTGAACAGAG---CAGTGTCGTC.......................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
AC----------AA-TGCGGAGCAGAG---CAATGTCGCCATCCTGAGGCGACCG---CAGGTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AC----------AA-TGCCGAGCTAAGC------------------AAAGAGCCACCAAAGGTATGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:44 PM