ID:

dsi_19091

 Coordinate:

3r:20386964-20387113 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.7 -9.1 -8.7

Flybase annnotation

five_prime_UTR [3r_20386931_20387760_+]; exon [3r_20386931_20388159_+]

No Repeatable elements found

Sense Strand Reads

-----------------#########################################################################################################################################################################################################################################
CAGATACTCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCGAATCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAGAAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAGTGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTCGACACGTCTGTCTGTTTTTTCTGTTTTTCTGCTTTACTGCTTCTACGCTATTCTGCTTT
*******************************************************.................(((((...((((((...(((........)))))))))...))))).************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
.........................................................................................................................................................................................ATACTCGACACGTCTGTCTGT............................................ 21 0 1 8.00 8 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTCGCATTTGTGTGGATG.................................................................................................................................... 18 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0
.............................GAAGTCCAAGTCGAATCTAATGTGC.................................................................................................................................................................................................... 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
.................CCGAACCGAACTGAAGTC....................................................................................................................................................................................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GTGGATGTGTGGTTGTAGTGAAGA................................................................................................................... 24 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AATACTCGACACGTCTGT................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TACTTACGTGTAGAGCAGTTCAAGAAA........................................................................................................................................................................ 27 0 1 2.00 2 0 0 0 0 0 1 0 0 0 1 0 0 0
.....................................AGTCGAATCTAATGTGCG................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...........................................................TACGTGTAGAGCAGTTCAAGAAAA....................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 1 0 0
......................................................GTACTTACGTGTAGAGCA.................................................................................................................................................................................. 18 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 1
........................................................................................................................................................................................AATACTCGACACGTCTGTCTGT............................................ 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................ATTCAACGGTCGCATTTGTGTGGATGG................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACGACTAGAAAATACTC........................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................ATCTAATGTGCGTACTTACGTGTAGAGC................................................................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................ACTTACGTGTAGAGCAGTTCAAG........................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAATACTCGACACGTCTGTCTGT............................................ 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CGCATTTGTGTGGATGTG.................................................................................................................................. 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
................................GTCCAAGTCGAATCTAATG....................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATACTCGACACGTCTGTCTGG............................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GACTAGAAAATACTCGACACGTCTGT................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................TCCAAGTCGAATCTAATGTG..................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AATACTCGACACGTCTGC................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AACGGTCGCATTTGTGTGGATGT................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAGTCCAAGTCGAATCTAAT........................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAATACTCGACACGTCTGGCTGG............................................ 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................CGTGTAGAGCCGTTTAAGAC......................................................................................................................................................................... 20 3 4 1.00 4 0 1 3 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ACGAGCACCACGACTAGAAAATACTCGAC........................................................ 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................TACTTACGTGTAGAGCAGTT............................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..GATACTCGCTGCCATCCGAAC................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................GCAGACATTCAACGGTCGCATTTGTG.......................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................TTACGTGTAGAGCAGTTCAAGAAAAT...................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............CATCCGAACCGAACTGAAGTCC...................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................ATCTAATGTGCGTACTTACGTGTAGAG.................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGCATTTTTCCCCTGCAC................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................TGTGCGTACTTACGTGTAGAGCA.................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAAAATACTCGACACGTCTG................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................GTCGAATCTAATGTGCGTACTTACGTG......................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TGCGTACTTACGTGTAGAGCAGTTCAAGA.......................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................CGCATTTTTCCCCTGCACGAGCACG............................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTACGTGTAGAGCAGTTCAAG........................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................ATTCAACGGTCGCATTTGTGTGGATGT................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AATACTCGACACGTCTGTCTGG............................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTTCTACGCTATTCTGCTT. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TGTGTGGTTGTAGTGAGGAGTT................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................TGTAGAGCAGTTCAAATGAATG..................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................TACGTGTAGAGCAGTTCAAGA.......................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................AGTCCAAGTCGAATCTAATGTGC.................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................GTCCAAGTCGAATCTAATGTGCGT.................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACGACTAGAAAATACTCGACACG..................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGACTAGAAAATACTCGACACGTCTGTCT.............................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAATACTCGACACGTCTGTCT.............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................GAACCGAACTGAAGTCCAAGTC................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................ACTCGACACGTCTGTCTGTTT.......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAGAAAATACTCGACACGTCG.................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................TGAAGTCCAAGTCGAATCTAATGTGC.................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........TGCCATCCGAACCGAACTGAAGTCCA..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTCAACGGTCGCATTTGTGTGGATGT................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACTTACGTGTAGAGCAGTTCAAGA.......................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ACTCGACACGTCTGTCTGT............................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................ACCGAACTGAAGTCCAAGTCGAA.............................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................AAATACTCGACACGTCTGC................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAAAATACTCGACACGTCTGTCT.............................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATACTCGACACGTCTGTCC.............................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATACTCGACACGTCTGTCTGTTTTT........................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................GAAGTCCAAGTCGAATCTAA......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATACTCGACACGTCTGTCTGC............................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CATTCAACGGTCGCATTTGT........................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............CCATCCGAACCGAACTGAA.......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...ATACTCGCTGCCATCCGAACCGAACTGAA.......................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................CGCATTTGTGTGGATGTGTGG............................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................GTTTTTTCTGTTTTTCTGCT.......................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAGAAAATACTCGACACGTCTGTCTGT............................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTTTTCTGTTTTTCTGCTTTACTG.................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AAAATACTCGACACGTCTGG................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.AGATACTCGCTGCCA.......................................................................................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............CCATCCGAACCGAACTGAAGTCC...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ATACTCGACACGTCTGTCTG............................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACGACTAGAAAATACTCG.......................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................TCTAATGTGCGTACTTACGTGTAGAGC................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTCAACGGTCGCATTTGTGTGGATG.................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................AACTGAAGTCCAAGTCGA............................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGCGAGCGTTAATCGGATTT.............................................................................................. 21 3 3 1.00 3 0 0 0 0 0 0 0 0 1 1 0 1 0
.............CCATCCGAACCGAACTGA........................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................CTAATGTGCGTACTTACGTGTAGAGC................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CTAGAAAATACTCGACACGTCC.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTGGTTGTAGTGAAGAGTGCC.............................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................CACGTCTGTCTGTTTTTTCT..................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGCCAGCATTAATCGCATT............................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................ATCTAATGTGCGTACTTACGTGTA....................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................ATTTTTCCCCTGCACGAGC............................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCGACACGTCTGTCTGTTTTTTCTGTT.................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................TGTGCGTACTTACGTGTAGAGC................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................ATACTCGACACGTCTGTCT.............................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGCGAGCGTTAATCGGATT............................................................................................... 20 3 4 0.75 3 0 0 0 0 1 1 0 0 1 0 0 0 0
........................................................................................................................................TGCGAGCGTTAATCGGATTT.............................................................................................. 20 3 5 0.60 3 0 0 0 0 0 0 0 0 2 1 0 0 0
.......................................................................................................................................GTGCGAGCGTTAATCGGAT................................................................................................ 19 3 10 0.40 4 0 0 0 0 0 0 0 0 1 1 0 2 0
.......................CGAACTGAAGTCCAGGTA................................................................................................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................TGTAGTTGTCGTGAAGA................................................................................................................... 17 2 12 0.25 3 0 0 0 0 0 0 0 0 0 0 0 3 0
...................................................................................................................ATGTGTGGTTGTAAT........................................................................................................................ 15 1 17 0.18 3 0 0 0 0 3 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGCAAGCGTTAATCGGATT............................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................ATGTGTGGTTGTAGC........................................................................................................................ 15 1 13 0.15 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGTCTGTTTTTTTTCTTTTGCTGC........................... 24 3 13 0.15 2 0 0 0 0 0 0 0 0 0 2 0 0 0
........................................................................................................................................TGCGAGCGTTAATCGGATT............................................................................................... 19 3 16 0.13 2 0 0 0 0 1 0 0 0 0 0 0 1 0
..................................................................................................................................GAAGAGTGCCGTCATT........................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................ATTCCCCTGGACGAGCCCC............................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................GAACTGAAGTCTAGGT.................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................GTGGTTCTAGCGAAGA................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GTCTATGAGCGACGGTAGGCTTGGCTTGACTTCAGGTTCAGCTTAGATTACACGCATGAATGCACATCTCGTCAAGTTCTTTTACACGTCTGTAAGTTGCCAGCGTAAACACACCTACACACCAACATCACTTCTCACGGTCGTAATTAGCGTAAAAAGGGGACGTGCTCGTGGTGCTGATCTTTTATGAGCTGTGCAGACAGACAAAAAAGACAAAAAGACGAAATGACGAAGATGCGATAAGACGAAA
************************************************************************************************************************************.................(((((...((((((...(((........)))))))))...))))).******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 O001
Testis
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
......................................................................GTCAAGTTCTTTTACACGTCT............................................................................................................................................................... 21 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0
..........................TGACTTCAGGTTCAGCTTAGA........................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGACGAAATGACAGAGATTCGAT......... 23 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................TGCACATCTCGTCAAGTTCTT......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.TCTATGAGCGACGGTAGGCT..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................GACTTCAGGTTCAGCTTAGA........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TCTCACGGTCGTAATTAGC................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGACGCTCTCGTGGTGCTGATGT................................................................... 23 3 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.......GGCGACGGTAGGCTTGGCTTG.............................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................GGGCTTGACTTCAGGTTCAGC................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGCTCGGGGTGCTGATCTTTTA............................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................TAAAAAGGGGACGTGCTCGT.............................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
................GGGCTTGGCTTGACTTCAG....................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGACAAAAAAGACAAAAAGACGAAATGA..................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............GTAGGCTTGGCTTGACTTCAG....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......AGCGACGGTAGGCTTGGCTTG.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................TTGGCTTGACTTCAGGTTCAGC................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................AAAAAAGGCAAAAAGACGA.......................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................TCGTCAAGTTCTTTTACACGT................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TGGTGATGATCTCTTAAGAG........................................................... 20 3 3 1.00 3 0 0 1 1 0 0 0 0 0 1 0 0
......GAGCGACGGTAGGCTTGGCTTGA............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................CTTCAGGTTCAGCTTAGGTTA........................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................GTGCTGATCTTTTATGAGCTG........................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................GACGCCCTCGTGGTGCTGATGT................................................................... 22 3 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
..CTGTGAGCGGCGGTAGGCT..................................................................................................................................................................................................................................... 19 2 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGCTGTACAGATAGACAAAAA........................................ 21 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................TCACACGTCTGTCAGGTGCC..................................................................................................................................................... 20 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAGACGTAATGACCAAGTTG............. 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................GCACATCTCGGCAAATTC........................................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTTTTTAGGAGCTGTGTAGA.................................................. 20 3 15 0.13 2 0 0 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................CCGAAAGACAAAAAAGACAA.................................. 20 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................TGACTTCAGGTTCAGG................................................................................................................................................................................................................ 16 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................AAAAAGAAAAAAAGACGAA......................... 19 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AGGGGACGTGCTTGCAGTG.......................................................................... 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GCTGATCTCTGATGAG........................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:20386914-20387163 + dsi_19091 CAGATA----------C--------TCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTTTTTCTGTTTTTCTGCTTTACTGC------TTCTACGCTATTCTGCTTT---
droSec2 scaffold_33:137808-138057 + CAGATA----------C--------TCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTTTTTCTGTTTTTCTGCTTTACTGC------TTCTACGCTATTTTGCTTT---
dm3 chr3R:20876041-20876281 + CAGATA----------C--------TCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAACAGTTCAAG------AAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTT---------TTCTGCTTTATTGC------TTCTACGCTATTCTGCTTT---
droEre2 scaffold_4820:7176443-7176686 - CAGACA----------C--------TCGCTGCCATCCGTACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATACAACAGTCGCATATGTGTGGATGTGTGGTTGTAGTGAAGAGTGCGAGTGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACAACGACTAGAAAATACTC------------GACACGTCTGTCTGTTT-TTCTGTT-TTCTGCTTCTCTGC------TTTTC--------C-----GTT
droYak3 3R:25621485-25621748 - CAGATTCAGATTCACATTCAGACACTCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCAAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATACAACAGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTTTTTCTGTT-TTCTGCTTTTCTGC------TTCT---CTTCTCTGCTTT---
droEug1 scf7180000409692:524485-524668 - CAGATA----------C--------TCGCC------CT-----AAT--AAGTTA---------------AA---CTCTAATGTGCGTACTTACGTGTGAAGCAGTTAAGG------AAAATGTGCAAACATACAGCAA-CACATATATGT----GTGTGGATGTAGTGAAGAG------TGCTAGCATTAATCGCATTTTTCCCTTGCACG------ACGACTAGAAAATACTC------------GACACGTTTGTCTGTG---TCTGTT-------------------------------------------
droBia1 scf7180000302136:1672158-1672375 + CAGATA----------C--------TCGTTGCCATCCAGACCGTGCTGAAGCCA---------------AA---TACTAATGTGTGTACTTACGTGTAAAGCAGTTAAGG------AAAATGTGCGAACACACAACCGCAGC------GTGGC--TGTGGCTGTAGCGAAGAG------TGCCAGCCTTAGTCGCATTTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACACGTTTGTCTGCC---TCTGCC--TCTGCCT--CTGCCTCTGCTTC----------T-----GCC
droTak1 scf7180000415658:190975-191192 + CAGATA----------C--------TCGTTGCCAGCCAAACCGAACTGAAGTCA---------------AA---TACTAATGTGTGTACTTACGTGTAAAGCAGTTAAAGTTAAAAAAAATGTGCAAACACACAACCATAGC------GTGGC--TGTGGATGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACACGTTTGTCTGTT---TCTGAT-TTCTGCCTT-CTGC------TTC----------T-----G--
droEle1 scf7180000491212:188586-188759 + TAAGCA----------C--------TC----------AAAC---ACTAAAGTCAAAAT-----------------ACTAATGTGCGTACTTACGTGTAAAGCAGTTGAGA------AAAATGTGCAAACGTACTACTACCAT--A--TG--TA--CTTGTATGTGGTGAAGAG------TGCCAGCATTAATCGCTTTTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACTCTAGTAGCTA------------------------------------------------------
droRho1 scf7180000778266:7177-7338 - CAGATA----------C--------TC----------AAACCGAACTGAAGTCAAAATC----------------ACTAATGTGCGTACTTACGTGTAAAGCAGTTGAAA------AAAATGTGCAAACATACTACC-----ATA--TG----------TATGTGGTGAAGAG------TGCCAGCATTAATCGCTATTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACTAGT-------------------------------------------------------------
droFic1 scf7180000454055:776559-776746 + CAGATA----------C--------TCGTTGCCAGCCAAACCGAAGTGAAGTCAAA------------------AACTCATGTGCGTACTTACGTGTAAAGCAGTCGAAG------AAAATGTGCAAACATACAACTACCAT--A--TG--TA--CTTGTATGTGGTGAAGAG------TGTCAGCGTTAATCGCCTTTTCCCTCTGCATG------ACGACTAGAAAATACTC------------GATAC-CGTGTCTGTTT---------------------------------------------------
droKik1 scf7180000302388:1045887-1046045 - CAGATA----------C--------TCGCTGCCAGCCGAACCGTACTGAAGTCG---------------ACTACTCCTCATGTGCGTACTCACGTATAAAGCAGTTA---------AAAATGTGCAAACATACCACC-----ATA--TG----------TATGTGGTGAAGAG------TGCCAGCATTAATCGCATTTTTCTTCTGCACG------ACGACTAGAAAAT------------------------------------------------------------------------------------
droAna3 scaffold_13340:6728553-6728742 + CAGATA----------C--------TCGCTGCCAGCCGAACCGAAGTGAACTCGAAT---CTTAAACAC--TATATCTAATGTGTGTAATTAAATATAAAGCAGCTA---------AAAATGTGCAAACATACTACC-----ATA--TG----------TATGTAGTGAAAAG------TGCTAGCATAAATCGCATTTTTATTTTGCACG------ACGACTAGAAAATACTACTCGTACAAAGGCACAC---------------------------------------------------------------
droBip1 scf7180000396708:2110856-2111045 - CAGATA----------C--------TCGCTGCCAGCCGAACCGAAGTGAACTCGAAT---CTTAAACAC--TAAATCTAATGTGTGTAATTAAATATAAAGCAGCTA---------AAAATGTGCAAACATACTACC-----ATA--TG----------TATGTAGTGAAAAG------TGCTAGCATAAATCGCATTTTTATTTTGCACG------ACGACTAGAAAATACTACTCGTACAAAGGCACAC---------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGATA----------C--------TCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTTTTTCTGTTTTTCTGCTTTACTGC------TTCTACGCTATTCTGCTTT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTGT.....................................................2118.00804400000000000000
.........................................................................................................................................GTCGCATTTGTGTGGATG...............................................................................................................................................................1813.00320100000000000000
...............................................GAAGTCCAAGTCG---------AA----TCTAATGTGC.....................................................................................................................................................................................................................................2513.00330000000000000000
...................................CCGAACCGAACTGAAGTC.....................................................................................................................................................................................................................................................................1813.00330000000000000000
....................................................................................................................................................GTGGATGTGTGGTTGTAGTGAAGA..............................................................................................................................................2412.00201010000000000000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGT.........................................................1812.00200200000000000000
......................................................................................TACTTACGTGTAGAGCAGTTCAAG------AAA...................................................................................................................................................................................................2712.00200000011000000000
.......................................................AGTCG---------AA----TCTAATGTGCG....................................................................................................................................................................................................................................1812.00200000000002000000
..........................................................................................TACGTGTAGAGCAGTTCAAG------AAAA..................................................................................................................................................................................................2412.00200000000001010000
.....................................................................................GTACTTACGTGTAGAGCA...................................................................................................................................................................................................................1812.00200000000001100000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGTCTGT.....................................................2212.00202000000000000000
.................................................................................................................................ATTCAACGGTCGCATTTGTGTGGATGG..............................................................................................................................................................2712.00202000000000000000
........................................................................................................................................................................................................................CACGACTAGAAAATACTC------------....................................................................1812.00200200000000000000
......................................................................A----TCTAATGTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2812.00202000000000000000
.......................................................................................ACTTACGTGTAGAGCAGTTCAAG------......................................................................................................................................................................................................2312.00200200000000000000
..................................................................................................................................................................................................................................AAATACTC------------GACACGTCTGTCTGT.....................................................2312.00201100000000000000
...........................................................................................................................................CGCATTTGTGTGGATGTG.............................................................................................................................................................1812.00210100000000000000
..................................................GTCCAAGTCG---------AA----TCTAATG........................................................................................................................................................................................................................................1912.00220000000000000000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTGG.....................................................2112.00200200000000000000
...........................................................................................................................................................................................................................GACTAGAAAATACTC------------GACACGTCTGT.........................................................2611.00100100000000000000
...................................................TCCAAGTCG---------AA----TCTAATGTG......................................................................................................................................................................................................................................2011.00110000000000000000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGC.........................................................1811.00100100000000000000
.....................................................................................................................................AACGGTCGCATTTGTGTGGATGT..............................................................................................................................................................2311.00100100000000000000
................................................AAGTCCAAGTCG---------AA----TCTAAT.........................................................................................................................................................................................................................................2011.00100100000000000000
................................................................................................................................................................................................................ACGAGCACCACGACTAGAAAATACTC------------GAC.................................................................2911.00100000000000010000
......................................................................................TACTTACGTGTAGAGCAGTT................................................................................................................................................................................................................2011.00100000000000001000
..GATA----------C--------TCGCTGCCATCCGAAC.................................................................................................................................................................................................................................................................................2111.00100000100000000000
...........................................................................................................................GCAGACATTCAACGGTCGCATTTGTG.....................................................................................................................................................................2611.00100010000000000000
.........................................................................................TTACGTGTAGAGCAGTTCAAG------AAAAT.................................................................................................................................................................................................2611.00101000000000000000
................................CATCCGAACCGAACTGAAGTCC....................................................................................................................................................................................................................................................................2211.00100000100000000000
......................................................................A----TCTAATGTGCGTACTTACGTGTAGAG.....................................................................................................................................................................................................................2711.00100010000000000000
................................................................................................................................................................................................CGCATTTTTCCCCTGCAC........................................................................................................1811.00100000100000000000
................................................................................TGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2311.00110000000000000000
................................................................................................................................................................................................................................GAAAATACTC------------GACACGTCTG..........................................................2011.00100000000000001000
........................................................GTCG---------AA----TCTAATGTGCGTACTTACGTG..........................................................................................................................................................................................................................2711.00100100000000000000
..................................................................................TGCGTACTTACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2911.00100000010000000000
................................................................................................................................................................................................CGCATTTTTCCCCTGCACGAGCACG.................................................................................................2511.00101000000000000000
.........................................................................................TTACGTGTAGAGCAGTTCAAG------......................................................................................................................................................................................................2111.00100000010000000000
.................................................................................................................................ATTCAACGGTCGCATTTGTGTGGATGT..............................................................................................................................................................2711.00101000000000000000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGTCTGG.....................................................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................C------TTCTACGCTATTCTGCTT....1911.00100010000000000000
..........................................................................................TACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2111.00101000000000000000
.................................................AGTCCAAGTCG---------AA----TCTAATGTGC.....................................................................................................................................................................................................................................2311.00101000000000000000
..................................................GTCCAAGTCG---------AA----TCTAATGTGCGT...................................................................................................................................................................................................................................2411.00100100000000000000
........................................................................................................................................................................................................................CACGACTAGAAAATACTC------------GACACG..............................................................2411.00100100000000000000
..........................................................................................................................................................................................................................CGACTAGAAAATACTC------------GACACGTCTGTCT.......................................................2911.00100100000000000000
..................................................................................................................................................................................................................................AAATACTC------------GACACGTCTGTCT.......................................................2111.00100100000000000000
.....................................GAACCGAACTGAAGTCCAAGTC...............................................................................................................................................................................................................................................................2211.00100000000000001000
......................................................................................................................................................................................................................................ACTC------------GACACGTCTGTCTGTTT...................................................2111.00100100000000000000
..............................................................................................................................................................................................................................TAGAAAATACTC------------GACACGTCG...........................................................2111.00110000000000000000
..............................................TGAAGTCCAAGTCG---------AA----TCTAATGTGC.....................................................................................................................................................................................................................................2611.00100000010000000000
.............................TGCCATCCGAACCGAACTGAAGTCCA...................................................................................................................................................................................................................................................................2611.00101000000000000000
..................................................................................................................................TTCAACGGTCGCATTTGTGTGGATGT..............................................................................................................................................................2611.00101000000000000000
.......................................................................................ACTTACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2411.00101000000000000000
......................................................................................................................................................................................................................................ACTC------------GACACGTCTGTCTGT.....................................................1911.00101000000000000000
.......................................ACCGAACTGAAGTCCAAGTCG---------AA----...............................................................................................................................................................................................................................................2311.00100000000000001000
..................................................................................................................................................................................................................................AAATACTC------------GACACGTCTGC.........................................................1911.00100100000000000000
................................................................................................................................................................................................................................GAAAATACTC------------GACACGTCTGTCT.......................................................2311.00100100000000000000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCC.......................................................1911.00100100000000000000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTGTTTTT.................................................2511.00100000000001000000
...............................................GAAGTCCAAGTCG---------AA----TCTAA..........................................................................................................................................................................................................................................2011.00101000000000000000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTGC.....................................................2111.00101000000000000000
................................................................................................................................CATTCAACGGTCGCATTTGT......................................................................................................................................................................2011.00101000000000000000
...............................CCATCCGAACCGAACTGAA........................................................................................................................................................................................................................................................................1911.00110000000000000000
...ATA----------C--------TCGCTGCCATCCGAACCGAACTGAA........................................................................................................................................................................................................................................................................2911.00100010000000000000
...........................................................................................................................................CGCATTTGTGTGGATGTGTGG..........................................................................................................................................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................GTTTTTTCTGTTTTTCTGCT...................................2011.00100100000000000000
..............................................................................................................................................................................................................................TAGAAAATACTC------------GACACGTCTGTCTGT.....................................................2711.00100100000000000000
.....................................................................................................................................................................................................................................................................TTTTTCTGTTTTTCTGCTTTACTG.............................2411.00101000000000000000
.................................................................................................................................................................................................................................AAAATACTC------------GACACGTCTGG.........................................................2011.00100100000000000000
.AGATA----------C--------TCGCTGCCA........................................................................................................................................................................................................................................................................................1511.00100000010000000000
...............................CCATCCGAACCGAACTGAAGTCC....................................................................................................................................................................................................................................................................2311.00100100000000000000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTG......................................................2011.00100100000000000000
.........................................................................................................................................................................................................................ACGACTAGAAAATACTC------------G...................................................................1811.00100100000000000000
...........................................................................TCTAATGTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2711.00100100000000000000
..................................................................................................................................TTCAACGGTCGCATTTGTGTGGATG...............................................................................................................................................................2511.00110000000000000000
...........................................AACTGAAGTCCAAGTCG---------A....................................................................................................................................................................................................................................................1811.00100010000000000000
...............................CCATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................CTAATGTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2611.00101000000000000000
.............................................................................................................................................................................................................................CTAGAAAATACTC------------GACACGTCC...........................................................2211.00101000000000000000
............................................................................................................................................................GTGGTTGTAGTGAAGAG------TGCC...................................................................................................................................2111.00100000000100000000
........................................................................................................................................................................................................................................................CACGTCTGTCTGTTTTTTCT..............................................2011.00101000000000000000
............................................................................................................................................................................G------TGCCAGCATTAATCGCATT....................................................................................................................2011.00100010000000000000
......................................................................A----TCTAATGTGCGTACTTACGTGTA........................................................................................................................................................................................................................2411.00100000000001000000
...................................................................................................................................................................................................ATTTTTCCCCTGCACGAGC....................................................................................................1911.00100010000000000000
........................................................................................................................................................................................................................................TC------------GACACGTCTGTCTGTTTTTTCTGTT...........................................2711.00100000001000000000
................................................................................TGTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2211.00100000100000000000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCT.......................................................1911.00100100000000000000
........................................................................................................................................................ATGTGTGGTTGTAGC...................................................................................................................................................15130.15200000000002000000
droSec2
CAGATA----------C--------TCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTTTTTCTGTTTTTCTGCTTTACTGC------TTCTACGCTATTTTGCTTT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTGT.....................................................2113.0030210
................................................AAGTCCAAGTCG---------AA----TCTAATGTG......................................................................................................................................................................................................................................2313.0031110
......................................................................A----TCTAATGTGCGTACTTACGTGTA........................................................................................................................................................................................................................2413.0030300
.......................................ACCGAACTGAAGTCCAAG.................................................................................................................................................................................................................................................................1812.0020020
.......................................................................................................................ATGTGCAGACATTCAACGGT...............................................................................................................................................................................2012.0022000
.....................................................................................................................................AACGGTCGCATTTGTGTGG..................................................................................................................................................................1912.0020002
.....A----------C--------TCGCTGCCATCCGAACCGTT.............................................................................................................................................................................................................................................................................2212.0020200
..............................................................................................................................................................GGTTGTAGTGAAGAG------TGCCAGCA...............................................................................................................................2311.0011000
...........................................AACTGAAGTCCAAGTCG---------AA----TCTAATG........................................................................................................................................................................................................................................2611.0010100
.......................................................................................................................ATGTGCAGACATTCAACGGTCG.............................................................................................................................................................................2211.0010010
............................CTGCCATCCGAACCGAACTG..........................................................................................................................................................................................................................................................................2011.0010100
....................................CGAACCGAACTGAAGTCCAAGTC...............................................................................................................................................................................................................................................................2311.0010010
..............................................................................AATGTGCGTACTTACGTG..........................................................................................................................................................................................................................1811.0010001
................................................AAGTCCAAGTCG---------AA----TCTAATG........................................................................................................................................................................................................................................2111.0010100
................................................AAGTCCAAGTCG---------AA----TCTA...........................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................GTGGTTGTAGTGAAGAG------T......................................................................................................................................1811.0010010
................................................AAGTCCAAGTCG---------AA----TCTAATGTGC.....................................................................................................................................................................................................................................2411.0011000
............................................ACTGAAGTCCAAGTCG---------AA----...............................................................................................................................................................................................................................................1811.0010001
..............................................................................AATGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2511.0010010
................................................................................................TAGAGCAGTTCAAG------AAAATGTG..............................................................................................................................................................................................2211.0010100
.........................................................................................................................................GTCGCATTTGTGTGGATGTG.............................................................................................................................................................2011.0010010
.......................................................................................ACTTACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2411.0010100
..............................................................................................................................................................................................................GCACGAGCACCACGACTAGAA.......................................................................................2111.0010100
...........................GCTGCCATCCGAACCGAACTGAA........................................................................................................................................................................................................................................................................2311.0010100
............................................................................................................................................................................................................................ACTAGAAAATACTC------------GACACGTC............................................................2211.0010100
..............................................................................................................................................ATTTGTGTGGATGTGTGGTT........................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................................................CTGTCTGTTTTTTCTGTTTTT........................................2111.0011000
...........................................................................................................................................CGCATTTGTGTGGATGTGTGGTTGTA.....................................................................................................................................................2611.0010100
.....................................................CAAGTCG---------AA----TCTAATGTG......................................................................................................................................................................................................................................1811.0010001
........................................................................................................................................................ATGTGTGGTTGTAGTGAAGA..............................................................................................................................................2011.0010010
................................................................................................................................................TTGTGTGGATGTGTGGTTGT......................................................................................................................................................2011.0010010
..............................................................................................................................................ATTTGTGTGGATGTGTGGTTGTAG....................................................................................................................................................2411.0010100
...........................................................................................................................................................TGTGGTTGTAGTGAAGAG------TGC....................................................................................................................................2111.0010100
...........................................................................................................................................CGCATTTGTGTGGATGTGTGGTT........................................................................................................................................................2311.0010010
.....................................GAACCGAACTGAAGTCCAAG.................................................................................................................................................................................................................................................................2011.0010010
...................................................TCCAAGTCG---------AA----TCTAATG........................................................................................................................................................................................................................................1811.0010010
.....................................................................AA----TCTAATGTGCGTACTTACGTG..........................................................................................................................................................................................................................2311.0010001
................................................................................................................................CATTCAACGGTCGCATTTGTGT....................................................................................................................................................................2211.0010100
....................................................................................CGTACTTACGTGTAGAGCAGTTCAAG------......................................................................................................................................................................................................2611.0010001
...............................................................................ATGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2411.0010010
.AGATA----------C--------TCGCTGCCATCCG....................................................................................................................................................................................................................................................................................1911.0010010
......................................................................A----TCTAATGTGCGTACTTACG............................................................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................................................................GACTAGAAAATACTC------------GACACGTCT...........................................................2411.0010010
................................................................................................................................................................................................CGCATTTTTCCCCTGCACGAG.....................................................................................................2111.0010100
..................................................GTCCAAGTCG---------AA----TCTAATGTGCG....................................................................................................................................................................................................................................2311.0010010
..........................................................................................................................................................GTGTGGTTGTAGTGAAGA..............................................................................................................................................1811.0010010
............................................................................................................................................................................................................................ACTAGAAAATACTC------------GACACGT.............................................................2111.0011000
...................................................TCCAAGTCG---------AA----TCTAATGTGC.....................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................CACGTCTGTCTGTTTTTTCTG.............................................2111.0010100
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGT.........................................................1811.0010010
............................................ACTGAAGTCCAAGTCG---------AA----TCTAATG........................................................................................................................................................................................................................................2511.0011000
..........................................................................................TACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2111.0010010
............................CTGCCATCCGAACCGAACTGAAGTC.....................................................................................................................................................................................................................................................................2511.0010010
.................................................................................................................................................................................................................CGAGCACCACGACTAGAAAATACT.................................................................................2411.0010100
................C--------TCGCTGCCATCCGAACCGAA.............................................................................................................................................................................................................................................................................2111.0010100
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGTCTGT.....................................................2211.0010001
.................................................................................GTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2211.0010010
dm3
CAGATA----------C--------TCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAACAGTTCAAG------AAAATGTGCAGACATTCAACGGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTT---------TTCTGCTTTATTGC------TTCTACGCTATTCTGCTTT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.AGATA----------C--------TCGCTGCCATCCGAACCGAA.............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................AACCGAACTGAAGTCCAA..................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................ACCGAACTGAAGTCCAAGTCG---------A....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................GGATGTGTGGTTGTAGTG..................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................CGAGCACCACGACTAGAAA......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ACGAGCACCACGACTAGAAAAT....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................G---------AA----TCTAATGTGCGTACT................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AACCGAACTGAAGTCCA...................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GTGGTTGTAGTGAAGAG------TGCCA..................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................CACGAGCACCACGACTAGAAAATACTC------------GA..................................................................2911.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GATA----------C--------TCGCTGCCATCCGAACCG...............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................TCCGAACCGAACTGAAGT......................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ATGTGCGTACTTACGTGTAGAACAG..................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................CGAACTGAAGTCCAAGTCG---------AA----...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................CTGCCATCCGAACCGAACTGAA........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................CCATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGTGAAGAG------TGCCAGCATT.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GAG------TGCCAGCATTAATCGC.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGTGCGTACTTACGTGTAGAACAGT.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................GTGGTTGTAGTGAAGAG------T......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................GCCATCCGAACCGAACTGAAGTCCA...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................ATTCAACGGTCGCATTTGTGTG...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................TCTAATGTGCGTACTTACGTGTA........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GTTGTAGTGAAGAG------TGCCAGC................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................TGTGCAGACATTCAACGGTCG.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................TGCTTTATTGC------TTCTACGCTA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CCTGCACGAGCACCACGACTAG.........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TGTGCAGACATTCAACGGTCGC............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTTGTGTGGATGTGTGGTTGTAGTGAAGA..............................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTGCCATCCGAACCGAAC............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCTGCCATCCGAACCGAACT...........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGAAGAG------TGCCAGCATTAATCGCAT.....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................TCCAAGTCG---------AA----TCTAATGTGCGTACT................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................GTGTGGTTGTAGTGAAGAG------TGCC...................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................CAAGTCG---------AA----TCTAATGTG......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CGCATTTGTGTGGATGTGT............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GATGTGTGGTTGTAGTGAAGAG------TGC....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGCTGCCATCCGAACCGAA.............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................TTGTAGTGAAGAG------TGCCAGCATTAAT..........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................ACTGAAGTCCAAGTCG---------AA----TCTA...........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................AACCGAACTGAAGTCCAAGTCG---------A....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGAAGTCCAAGTCG---------AA----TCTAATGT.......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................GCATTTGTGTGGATGTGTGGTTGTAG....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................AACTGAAGTCCAAGTCG---------AA----T..............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................GAAAATACTC------------GACACGTCTGTC........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ACGGTCGCATTTGTGTGGATGTG.............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CGCATTTGTGTGGATGT..............................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACCGAACTGAAGTCCAAGTCG---------.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................CTGCCATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................TTACGTGTAGAACAGTTCAAG------A.....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................GTGTGGTTGTAGTGAAGA..............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................GTGGATGTGTGGTTGTAGTGAAGA..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGCTGCCATCCGAACCGAACTGAAG.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................GACATTCAACGGTCGCATTTGTGT....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TCGCATTTTTCCCCTGCACGAGCACC.................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CACGTCTGTCTGTTT---------TTCTGCTTT.................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CTC------------GACACGTCTGTCTGTTT---------T.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GTACTTACGTGTAGAACAGTTCAAG------AA....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................CAAGTCG---------AA----TCTAATGTGCGTA..................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................CGCTGCCATCCGAACCGAACAC..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................AACTGAAGTCCAAGTCG---------AA----...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................AGTCG---------AA----TCTAATGTGCGTACT................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................GTGTGGATGTGTGGTTGTAGTA..................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ATTTTTCCCCTGCACGAG.....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AAGTCG---------AA----TCTAATGTGCGTA..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................CTAGAAAATACTC------------GACACGTC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCCGAACCGAACTGAAGTCCAAG.................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................ACTAGAAAATACTC------------GACACGTCTG..........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGCTGCCATCCGAACCGAACTGAAGTC.....................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TA----------C--------TCGCTGCCATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droEre2
CAGACA----------C--------TCGCTGCCATCCGTACCGAACTGAAGTCCAAGTCG---------AA----TCTAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATACAACAGTCGCATATGTGTGGATGTGTGGTTGTAGTGAAGAGTGCGAGTGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACAACGACTAGAAAATACTC------------GACACGTCTGTCTGTTT-TTCTGTT-TTCTGCTTCTCTGC------TTTTC--------C-----GTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................GTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2212.0020001010
............................................................................CTAATGTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2612.0020000110
..............................................................................AATGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2512.0021000100
..........................................................................................TACGTGTAGAGCAGTTCAAG------......................................................................................................................................................................................................2012.0020000200
.................................................................................GTGCGTACTTACGTGTAGA......................................................................................................................................................................................................................1911.0010000100
............................................................................................................................................................GTGGTTGTAGTGAAGAGTGCGAGT......................................................................................................................................2411.0011000000
..........................................................................................TACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2111.0010000010
.......................................................................................................................................................GATGTGTGGTTGTAGTGAAGAGTGC..........................................................................................................................................2511.0010001000
.................................................................................................................................................TGTGTGGATGTGTGGTTGTA.....................................................................................................................................................2011.0010000100
.................................................................................................................................................................TGTAGTGAAGAGTGCGAGTGCCAGC................................................................................................................................2511.0010000010
....................................................................................................................................................GTGGATGTGTGGTTGTAGTGAA................................................................................................................................................2211.0010000100
..............................................................................................................................................ATATGTGTGGATGTGTGGTTGTAGT...................................................................................................................................................2511.0010000010
...........................................................................................................................GCAGACATACAACAGTCGC............................................................................................................................................................................1911.0010000010
...................................................................................................................................................................................................ATTTTTCCCCTGCACGAGCAC..................................................................................................2111.0010000010
...................................................................................................................................................................................................ATTTTTCCCCTGCACGAGC....................................................................................................1911.0010000100
.................................ATCCGTACCGAACTGAAGTCC....................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................................................................ATTAATCGCATTTTTCCCCTGCACGA......................................................................................................2611.0010010000
.....................................................................................GTACTTACGTGTAGAGCAGTTCAAG------......................................................................................................................................................................................................2511.0010001000
.......................................................................................................................................................GATGTGTGGTTGTAGTGAA................................................................................................................................................1911.0010000100
...................................................................................................................................ACAACAGTCGCATATGTGTGGATGT..............................................................................................................................................................2511.0010000100
..........................................GAACTGAAGTCCAAGTCG---------A....................................................................................................................................................................................................................................................1911.0010000100
.............................................................................................................................................................................................................TGCACGAGCACAACGACTAGAAAATACTC------------....................................................................2911.0011000000
.....................................................................................GTACTTACGTGTAGAGCAGTTCAAG------A.....................................................................................................................................................................................................2611.0010000100
..................................TCCGTACCGAACTGAAGTCCAAGTCG---------.....................................................................................................................................................................................................................................................2611.0010000100
............................................................................................................................................................GTGGTTGTAGTGAAGAGTGC..........................................................................................................................................2011.0010000010
...............................................................................................GTAGAGCAGTTCAAG------AAAATGTGCA............................................................................................................................................................................................2511.0010000100
.........................................................................................................TCAAG------AAAATGTGCAGAC.........................................................................................................................................................................................1811.0011000000
............................................................................................................................................................................GTGCGAGTGCCAGCATTAATCG........................................................................................................................2211.0010000010
.....................................................................................GTACTTACGTGTAGAGCAGT.................................................................................................................................................................................................................2011.0010001000
...............................................................................................................................................................GTTGTAGTGAAGAGTGCGAGTGCCAGC................................................................................................................................2711.0010001000
.................................ATCCGTACCGAACTGAAGTCCAAGT................................................................................................................................................................................................................................................................2511.0010000100
................................................................................................................................................................................................................................GAAAATACTC------------GACACGTCT...........................................................1911.0010000100
.............................................................................................GTGTAGAGCAGTTCAAG------AAAATGTGCA............................................................................................................................................................................................2711.0010000010
.........................................................................................................................................................TGTGTGGTTGTAGTGAAGAGTG...........................................................................................................................................2211.0011000000
.....................................................................................................................................................................................................................CACAACGACTAGAAAATACTC------------GACACGT.............................................................2811.0011000000
.AGACA----------C--------TCGCTGCCATCCGT...................................................................................................................................................................................................................................................................................2011.0010000010
.................................................................................................................................................................................................................................................................................TCTGCTTCTCTGC------TTTTC--------C-----G..2011.0010000100
..........................................................................................................CAAG------AAAATGTGCAGACATACAACAGT...............................................................................................................................................................................2711.0010000010
..............................................TGAAGTCCAAGTCG---------AA----TCTAATGTGCG....................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................GTGGATGTGTGGTTGTAGTGA.................................................................................................................................................2111.0010000100
...............................................................................................GTAGAGCAGTTCAAG------AAAATGT...............................................................................................................................................................................................2211.0010000100
................C--------TCGCTGCCATCCGTACCG...............................................................................................................................................................................................................................................................................1911.0010100000
..............................................................................................................................................................................................................................TAGAAAATACTC------------GACACGTCTGT.........................................................2311.0010000010
.................................................................................................................................ATACAACAGTCGCATATGTGTGGATGT..............................................................................................................................................................2711.0010000100
..................................................GTCCAAGTCG---------AA----TCTAATGTGCGTACT................................................................................................................................................................................................................................2711.0010000100
............................................................................................CGTGTAGAGCAGTTCAAG------AA....................................................................................................................................................................................................2011.0010000100
..............................................................................................................................................ATATGTGTGGATGTGTGGTTGTAGTG..................................................................................................................................................2611.0010000100
..............................................................................................................................................................GGTTGTAGTGAAGAGTGC..........................................................................................................................................1811.0010000100
...............................................................................................GTAGAGCAGTTCAAG------AAAATGTG..............................................................................................................................................................................................2311.0010000100
....................................................CCAAGTCG---------AA----TCTAATGTGC.....................................................................................................................................................................................................................................2011.0010000010
................................................................................................................................................ATGTGTGGATGTGTGGTT........................................................................................................................................................1811.0010000010
.........................................................................................TTACGTGTAGAGCAGTTCAAG------AAA...................................................................................................................................................................................................2411.0010000010
..............................GCCATCCGTACCGAACTGAAGTCCA...................................................................................................................................................................................................................................................................2511.0010000010
.................................................................................GTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2111.0010010000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGTCT.......................................................2011.0010100000
...............................................................................ATGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2411.0010000100
droYak3
CAGATTCAGATTCACATTCAGACACTCGCTGCCATCCGAACCGAACTGAAGTCCAAGTCG---------AA----TCAAATGTGCGTACTTACGTGTAGAGCAGTTCAAG------AAAATGTGCAGACATACAACAGTCGCATTTGTGTGGATGTGTGGTTGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACGAGCACCACGACTAGAAAATACTC------------GACACGTCTGTCTGTTTTTTCTGTT-TTCTGCTTTTCTGC------TTCT---CTTCTCTGCTTT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................GTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2213.00300020010000
..................................................................................................................................................................................................................................AAATACTC------------GACACGTCTGT.........................................................1913.00301100010000
....................................................................................................................................CAACAGTCGCATTTGTGTGGAT................................................................................................................................................................2212.00200000020000
.................................................................................................................................ATACAACAGTCGCATTTGT......................................................................................................................................................................1912.00220000000000
...............................................................................................GTAGAGCAGTTCAAG------AAAATGTG..............................................................................................................................................................................................2312.00200000020000
....................................................CCAAGTCG---------AA----TCAAATGTGCGTACT................................................................................................................................................................................................................................2512.00200000020000
..........................................................................................................................................................GTGTGGTTGTAGTGAAGAG------TG.....................................................................................................................................2112.00200000020000
...........................................................................................................................................CGCATTTGTGTGGATGTGTGGT.........................................................................................................................................................2212.00202000000000
.......................................................................................................................................................GATGTGTGGTTGTAGTGAA................................................................................................................................................1911.00100000010000
..........................................................................................................CAAG------AAAATGTGCAGACATACAACAGT...............................................................................................................................................................................2711.00100000010000
......................CACTCGCTGCCATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................2711.00101000000000
................................................................................................................................................TTGTGTGGATGTGTGGTTGTAGT...................................................................................................................................................2311.00100100000000
..................................................................................................................................................................GTAGTGAAGAG------TGCCAGCATTAATCGCA......................................................................................................................2811.00100000010000
..................................................GTCCAAGTCG---------AA----TCAAATGTGCGT...................................................................................................................................................................................................................................2411.00100000010000
....................................CGAACCGAACTGAAGTCC....................................................................................................................................................................................................................................................................1811.00110000000000
................................................................................................................................................TTGTGTGGATGTGTGGTTG.......................................................................................................................................................1911.00101000000000
...........................................................................................................................................................TGTGGTTGTAGTGAAGAG------T......................................................................................................................................1911.00100000010000
.......................................ACCGAACTGAAGTCCAAGTC...............................................................................................................................................................................................................................................................2011.00101000000000
...............................................GAAGTCCAAGTCG---------AA----TCAAATGTGC.....................................................................................................................................................................................................................................2511.00100000010000
......................................................................................................................AATGTGCAGACATACAACAGT...............................................................................................................................................................................2111.00101000000000
................................................................................TGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2311.00100000010000
..............................................................................AATGTGCGTACTTACGTGTAGAGCA...................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................CTGTT-TTCTGCTTTTCTGC------TTCT---CT.............2511.00101000000000
...............................................................................ATGTGCGTACTTACGTGTAGAGCAGTTCA..............................................................................................................................................................................................................2911.00100000010000
..........................................................CG---------AA----TCAAATGTGCGTACTTACGTGTAGA......................................................................................................................................................................................................................2911.00100000010000
............................................ACTGAAGTCCAAGTCG---------AA----TCAAATGTGC.....................................................................................................................................................................................................................................2811.00100000010000
............................................................................................................................................................GTGGTTGTAGTGAAGAG------TGC....................................................................................................................................2011.00100100000000
......................................................................................................AGTTCAAG------AAAATGTGCA............................................................................................................................................................................................1811.00101000000000
..............................................................................................................................................................GGTTGTAGTGAAGAG------TGCC...................................................................................................................................1911.00100100000000
..............................................................................................................................................ATTTGTGTGGATGTGTGGTT........................................................................................................................................................2011.00100000010000
.....................................GAACCGAACTGAAGTCCAAG.................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................ATACAACAGTCGCATTTGTGTGGATGTGT............................................................................................................................................................2911.00100000010000
.....................................................................................GTACTTACGTGTAGAGCAGTTCAAG------AA....................................................................................................................................................................................................2711.00100000010000
................................................................................................................................................TTGTGTGGATGTGTGGTTGT......................................................................................................................................................2011.00101000000000
.................................ATCCGAACCGAACTGAAGTCCAAGTC...............................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................AGAAAATACTC------------GACACGTC............................................................1911.00100100000000
..........................CGCTGCCATCCGAACCGAACTGAAG.......................................................................................................................................................................................................................................................................2511.00100010000000
...............................................................................ATGTGCGTACTTACGTGTAGAGCAGT.................................................................................................................................................................................................................2611.00110000000000
...................AGACACTCGCTGCCATCCGAACCGAAC............................................................................................................................................................................................................................................................................2711.00100100000000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGTC........................................................1911.00101000000000
.....................................................................................................................................AACAGTCGCATTTGTGTGGAT................................................................................................................................................................2111.00100000010000
.................................................................................GTGCGTACTTACGTGTAGAG.....................................................................................................................................................................................................................2011.00100000010000
......................CACTCGCTGCCATCCGAACC................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................ATGTGTGGTTGTAGTGAAGAG------TGC....................................................................................................................................2411.00100000010000
..................................................................................................................................................GTGTGGATGTGTGGTTGTAGTGAAG...............................................................................................................................................2511.00101000000000
....TTCAGATTCACATTCAGACAC.................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................................................................TACTC------------GACACGTCTGTCTGT.....................................................2011.00100000010000
.....................................................................................................................AAATGTGCAGACATACAACAGTCG.............................................................................................................................................................................2411.00100000010000
..............................................................................................................................................ATTTGTGTGGATGTGTGGTTGTAGT...................................................................................................................................................2511.00100000010000
.......................................................................................................................................CAGTCGCATTTGTGTGGATGTGTGGTT........................................................................................................................................................2711.00100000010000
..................................................................................................................................................................................................................GAGCACCACGACTAGAAAA.....................................................................................1911.00100010000000
.......................................................................................................................................................GATGTGTGGTTGTAGTGAAGAG------TGCC...................................................................................................................................2611.00100000010000
....................................................................................................................................................GTGGATGTGTGGTTGTAGT...................................................................................................................................................1911.00100000010000
....................................................................................................................................................................................................................................ATACTC------------GACACGTCTGTCTGC.....................................................2111.00100100000000
...................................................................................................................................................................................................ATTTTTCCCCTGCACGAGCACCAC...............................................................................................2411.00100000010000
...................................................................................................................................................................................................................................AATACTC------------GACACGTCTGTCTGT.....................................................2211.00110000000000
.....................................................................................................CAGTTCAAG------AAAATGTGCAGACATAC.....................................................................................................................................................................................2611.00100100000000
.....................................................................................................................AAATGTGCAGACATACAACAGTCGC............................................................................................................................................................................2511.00100000010000
............................CTGCCATCCGAACCGAACTGA.........................................................................................................................................................................................................................................................................2111.00110000000000
...............................................................................................................................................................................................................CACGAGCACCACGACTAGAAA......................................................................................2111.00100100000000
................................................................................................................................CATACAACAGTCGCATTTGTGT....................................................................................................................................................................2211.00100000010000
....................................................................................................................................................GTGGATGTGTGGTTGTAGTGAA................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................ACTC------------GACACGTCTGTCTGG.....................................................1911.00110000000000
.....................................................................................GTACTTACGTGTAGAGCAGTT................................................................................................................................................................................................................2111.00100100000000
....................................................................................................................................CAACAGTCGCATTTGTGTGGATGT..............................................................................................................................................................2411.00100100000000
..............................................................................................................................................................GGTTGTAGTGAAGAG------TGCCAGC................................................................................................................................2211.00100000010000
.................................................................................GTGCGTACTTACGTGTAGAGC....................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................TGTGTGGTTGTAGTGAAGAG------.......................................................................................................................................2011.00100000010000
.................................................................................GTGCGTACTTACGTGTAGAGCAGTT................................................................................................................................................................................................................2511.00100100000000
...................................................TCCAAGTCG---------AA----TCAAATG........................................................................................................................................................................................................................................1811.00101000000000
.....................................GAACCGAACTGAAGTCCAAGTC...............................................................................................................................................................................................................................................................2211.00100000010000
........................................................................................................................................................ATGTGTGGTTGTAGTGAAGA..............................................................................................................................................2011.00101000000000
..................................................................................................................................................................................................CATTTTTCCCCTGCACGAGC....................................................................................................2011.00100000010000
droEug1
CAGATA----------C--------TCGCC------CT-----AAT--AAGTTA---------------AA---CTCTAATGTGCGTACTTACGTGTGAAGCAGTTAAGG------AAAATGTGCAAACATACAGCAA-CACATATATGT----GTGTGGATGTAGTGAAGAG------TGCTAGCATTAATCGCATTTTTCCCTTGCACG------ACGACTAGAAAATACTC------------GACACGTTTGTCTGTG---TCTGTT-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAGATA----------C--------TCGTTGCCATCCAGACCGTGCTGAAGCCA---------------AA---TACTAATGTGTGTACTTACGTGTAAAGCAGTTAAGG------AAAATGTGCGAACACACAACCGCAGC------GTGGC--TGTGGCTGTAGCGAAGAG------TGCCAGCCTTAGTCGCATTTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACACGTTTGTCTGCC---TCTGCC--TCTGCCT--CTGCCTCTGCTTC----------T-----GCCSizeHit CountTotal NormTotal
No Reads
droTak1
CAGATA----------C--------TCGTTGCCAGCCAAACCGAACTGAAGTCA---------------AA---TACTAATGTGTGTACTTACGTGTAAAGCAGTTAAAGTTAAAAAAAATGTGCAAACACACAACCATAGC------GTGGC--TGTGGATGTAGTGAAGAG------TGCCAGCATTAATCGCATTTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACACGTTTGTCTGTT---TCTGAT-TTCTGCCTT-CTGC------TTC----------T-----G--SizeHit CountTotal NormTotal
No Reads
droEle1
TAAGCA----------C--------TC----------AAAC---ACTAAAGTCAAAAT-----------------ACTAATGTGCGTACTTACGTGTAAAGCAGTTGAGA------AAAATGTGCAAACGTACTACTACCAT--A--TG--TA--CTTGTATGTGGTGAAGAG------TGCCAGCATTAATCGCTTTTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACTCTAGTAGCTA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAGATA----------C--------TC----------AAACCGAACTGAAGTCAAAATC----------------ACTAATGTGCGTACTTACGTGTAAAGCAGTTGAAA------AAAATGTGCAAACATACTACC-----ATA--TG----------TATGTGGTGAAGAG------TGCCAGCATTAATCGCTATTTTCCCCTGCACG------ACGACTAGAAAATACTC------------GACTAGT-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAGATA----------C--------TCGTTGCCAGCCAAACCGAAGTGAAGTCAAA------------------AACTCATGTGCGTACTTACGTGTAAAGCAGTCGAAG------AAAATGTGCAAACATACAACTACCAT--A--TG--TA--CTTGTATGTGGTGAAGAG------TGTCAGCGTTAATCGCCTTTTCCCTCTGCATG------ACGACTAGAAAATACTC------------GATAC-CGTGTCTGTTT---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAGATA----------C--------TCGCTGCCAGCCGAACCGTACTGAAGTCG---------------ACTACTCCTCATGTGCGTACTCACGTATAAAGCAGTTA---------AAAATGTGCAAACATACCACC-----ATA--TG----------TATGTGGTGAAGAG------TGCCAGCATTAATCGCATTTTTCTTCTGCACG------ACGACTAGAAAAT------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CAGATA----------C--------TCGCTGCCAGCCGAACCGAAGTGAACTCGAAT---CTTAAACAC--TATATCTAATGTGTGTAATTAAATATAAAGCAGCTA---------AAAATGTGCAAACATACTACC-----ATA--TG----------TATGTAGTGAAAAG------TGCTAGCATAAATCGCATTTTTATTTTGCACG------ACGACTAGAAAATACTACTCGTACAAAGGCACAC---------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................TTTTTATTTTGCACG------ACGACT...........................................................................................2111.001000010
.AGATA----------C--------TCGCTGCCAGCCGA...................................................................................................................................................................................................................................................................................2011.001010000
................................................................................................................................................................................................................................GAAAATACTACTCGTACAAAGGCACAC---------------------------------------------------------------2711.001010000
..........................................................................ATCTAATGTGTGTAATTAAAT...........................................................................................................................................................................................................................2111.001001000
.......................................................AT---CTTAAACAC--TATATCTAATG........................................................................................................................................................................................................................................2211.001010000
..............................GCCAGCCGAACCGAAGTGAACTCGAA..................................................................................................................................................................................................................................................................2611.001000001
................................................................................................................................................A--TG----------TATGTAGTGAAAAG------TGCTAGCATA.............................................................................................................................2711.001000001
...............................................................................................................................................................................................................................AGAAAATACTACTCGTACAAAGG....................................................................2311.001010000
.....................................................................................GTAATTAAATATAAAGCAGCT................................................................................................................................................................................................................2111.001000010
.............................................................................................ATATAAAGCAGCTA---------AAAATGTGC.............................................................................................................................................................................................2311.001010000
....................................................................................................................................................................AGTGAAAAG------TGCTAGCATAAATCGG.......................................................................................................................2511.001010000
...............................................................................................ATAAAGCAGCTA---------AAAATGTGCAAACA........................................................................................................................................................................................2611.001010000
droBip1
CAGATA----------C--------TCGCTGCCAGCCGAACCGAAGTGAACTCGAAT---CTTAAACAC--TAAATCTAATGTGTGTAATTAAATATAAAGCAGCTA---------AAAATGTGCAAACATACTACC-----ATA--TG----------TATGTAGTGAAAAG------TGCTAGCATAAATCGCATTTTTATTTTGCACG------ACGACTAGAAAATACTACTCGTACAAAGGCACAC---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 12:07 PM