ID:

dsi_19085

 Coordinate:

2r:14597957-14598036 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2r_14598037_14598369_+]; CDS [2r_14598037_14598369_+]; CDS [2r_14597900_14597956_+]; exon [2r_14597857_14597956_+]; intron [2r_14597957_14598036_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------##################################################
AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAGAATGCCAAACCCACTGAGAGGTGGAGACGGCACCCCAGGGTGTGGGCTTATATAATCCTCAAATGAATTCCCCAGGCGTTCGCGGCGGCTGAAGCAACCAGCAGCTCCAAGGAGCTTACCTGGCA
**************************************************..................(((.((((..(((...(((((....)))))...))).......))))............)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M025
embryo
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
.......................GTTTGTCTGCTGCTCGTCGGT........................................................................................................................................ 21 0 1 18.00 18 15 3 0 0 0 0 0 0
......................AGTTTGTCTGCTGCTCGTCGGTGCT..................................................................................................................................... 25 0 1 11.00 11 10 1 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGTGCT..................................................................................................................................... 24 0 1 9.00 9 8 0 0 1 0 0 0 0
.............................CTGCTGCTCGTCGGTGCTCAGGC................................................................................................................................ 23 1 1 7.00 7 7 0 0 0 0 0 0 0
..........................TGTCTGCTGCTCGTCGGTGCTCAGGC................................................................................................................................ 26 1 1 7.00 7 6 1 0 0 0 0 0 0
......................AGTTTGTCTGCTGCTCGTCGGT........................................................................................................................................ 22 0 1 6.00 6 4 2 0 0 0 0 0 0
............................................................................................................................GCTCAGGCGTTCGCGGCGGCT................................... 21 2 1 6.00 6 6 0 0 0 0 0 0 0
...........................GTCTGCTGCTCGTCGGTGCT..................................................................................................................................... 20 0 1 6.00 6 6 0 0 0 0 0 0 0
......................AGTTTGTCTGCTGCTCGTC........................................................................................................................................... 19 0 1 4.00 4 3 1 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTC........................................................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0
..............ATTTTAGCAGTTTGTCTG.................................................................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0
..........................TGTCTGCTGCTCGTCGGT........................................................................................................................................ 18 0 1 4.00 4 4 0 0 0 0 0 0 0
............................................................................................................................GCTCAGGCGTTCGCGGCGGCTGA................................. 23 2 1 4.00 4 4 0 0 0 0 0 0 0
....TCCCTGCAAAATTTTAGC.............................................................................................................................................................. 18 0 1 3.00 3 0 3 0 0 0 0 0 0
..........................TGTCTGCTGCTCGTCGGTGCTCAGG................................................................................................................................. 25 0 1 3.00 3 1 2 0 0 0 0 0 0
...........................GTCTGCTGCTCGTCGGTGCTCAGG................................................................................................................................. 24 0 1 3.00 3 3 0 0 0 0 0 0 0
..............................TGCTGCTCGTCGGTGCTCAGGC................................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGTGCG..................................................................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0
.........................TTGTCTGCTGCTCGTCGGTGCT..................................................................................................................................... 22 0 1 2.00 2 0 0 2 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGC........................................................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0
.GGTTCCCTGCAAAATTTTAGC.............................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0
.........................TTGTCTGCTGCTCGTCGGTGCTCAGGC................................................................................................................................ 27 1 1 2.00 2 2 0 0 0 0 0 0 0
............................TCTGCTGCTCGTCGGTGCTCAGG................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGG........................................................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0 0
...........................GTCTGCTGCTCGTCGGTGCACAGGC................................................................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................GTTCGCGGCGGCTGAAGCAACCAGCA...................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGTGCTCAGGC................................................................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................CTGAAGCAACCAGCAGCT................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................CTGCTGCTCGTCGGTGCTCAGGCGTT............................................................................................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................GCCCAGGCGTTCGCGGCGGCTGA................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................TTGTCTGCTGCTCGTCGGT........................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
......................AGTTTGTCTGCTGCTCTTCGGTGCT..................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................CTCAGGCGTTCGCGGCGGCT................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................GCCCAGGCGTTCGCGGCGGCTGAA................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................TGTCTGCTGCTCGTCGGTGCT..................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........................TTTGTCTGCTGCTCGTCGGT........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................TGAAGCAACCAGCAGCTCCAAGG............. 23 0 1 1.00 1 0 1 0 0 0 0 0 0
......................AGTTTGTCTGCTGCTCGGCGGT........................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................GCTCAGGCGTTCGCGGCGGCTT.................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0
..........................TGTCTGCTGCTCGTCGGTGCTCAGAC................................................................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0
................TTTAGCAGTTTGTCTGCTGCT............................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......................AGTTTGTCTGCTGCTCGTCGGG........................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................GTCTGCTGCTCGTCGGTGCTCAG.................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................TGCTCAGGCGTTCGCGGCGGC.................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................CTCAGGCGTTCGCGGCGG..................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0
.............AATTTTAGCAGTTTGTCTG.................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................GCTCAGGCGTTCGCGGCGGCTGG................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGTTGCTCAGG................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................TGCTGCTCGTCGGTGCTCAGG................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGGGCT..................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................TGCTGCTCGTCGGTGCTCAGGCGTT............................................................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................GCGGCTGAAGCAACCAGC....................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGACGGT........................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0
........................TTTGTCTGCTGCTCGTCGGTGCTCAGGC................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................GCAACCAGCAGCTCCAAGGAGCT......... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
............................TCTGCTGCTCGTCGGTGCC..................................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................................GGCGGCTGAAGCAACCAGCA...................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
............AAATTTTAGCAGTTTGTCTG.................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................CCAAGGAGCTTACCTGGCA 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................GTCTGCTGCTCGTCGGTG....................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
........................TTTGTCTGCTGCTCGTCG.......................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................CTAAGCAACCAGCAGCTCCAAGGAGCT......... 27 2 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................CTCCAAGGAGCTTACCTGGC. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................GTTTGTCTGCTGCTCGTCGGTGCTCAG.................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
................TTTAGCAGTTTGTCTGCTGCTCGTC........................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................CTGCTGCTCGTCGGTGCTC.................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................CTGCTGCTCGTCGGTGCTCAGG................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................TGCTCGTCGGTGCTCAGGC................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................TTGTCTGCTGCTCGGCGGT........................................................................................................................................ 19 1 2 0.50 1 1 0 0 0 0 0 0 0
..................................GCTCGTCGGTGCTCAGGC................................................................................................................................ 18 1 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................CTCAGGCGTTCGCGGCGGCC................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0
..................................GCTCGTCGGTGCTCAGGCGTC............................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0
...................AGCGGTTTGTCTGCTGATCGGC........................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 1 0 0 0
.....................................................................CGAGAGGTGGAGACGG............................................................................................... 16 1 6 0.17 1 0 0 0 0 1 0 0 0
.........................................................TGCCAGATCCACTGAGA.......................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 1 0 0
.................................................................................................................................GGCTTTCGCGGCGGC.................................... 15 1 16 0.06 1 0 0 0 0 0 0 1 0
....................................................................................................................................GTTCGCGCCGTCTGAA................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................CAGCAGCTCGAAGGA............ 15 1 20 0.05 1 0 0 0 0 0 0 0 1
.............................................................................................................................CCCACGCGATCGCGGGGG..................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

TCCAAGGGACGTTTTAAAATCGTCAAACAGACGACGAGCAGCCACGAGTCCACTCTTACGGTTTGGGTGACTCTCCACCTCTGCCGTGGGGTCCCACACCCGAATATATTAGGAGTTTACTTAAGGGGTCCGCAAGCGCCGCCGACTTCGTTGGTCGTCGAGGTTCCTCGAATGGACCGT
**************************************************..................(((.((((..(((...(((((....)))))...))).......))))............)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
......................................................................................................................................AGCGCCACCGACTTCGTTAAT......................... 21 3 3 0.67 2 2 0 0 0 0 0
.......................................................................TCTCCACCTCTGCCG.............................................................................................. 15 0 3 0.33 1 0 1 0 0 0 0
.........................................................................................................................TGAGGGGTCCGCCAGC........................................... 16 2 20 0.30 6 0 0 3 2 0 1
........................................ACCACGAGTCCACTC............................................................................................................................. 15 1 15 0.13 2 0 2 0 0 0 0
.........................................................................................................ATATTAGGAGTTTAT............................................................ 15 1 20 0.10 2 0 0 2 0 0 0
...............................................................................................................................................GCCTTCCTTGGTCGTCGAA.................. 19 3 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................CCGCCTTCCTTGGTCG....................... 16 2 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................AGGGGTCCGAAAGCAC......................................... 16 2 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................CGAGTTGGTTGGTCATCGA................... 19 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14597907-14598086 + dsi_19085 AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGGAGACGGCACCCCAGGGTGTGGGCTTATATAA---------TCCTC-A---AATGAATTCCCCAGGCGTTCGCGGCGGCTGAAGCAACCAGCAG------CTCCAAGGAGCTTACCTGGCA
droSec2 scaffold_1:11401969-11402148 + AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGAAGACGGCACCCCAGGGTGTGGGCTTATATAA---------TCCTC-A---AATGAATTCCCCAGGCGTTTGCGGCGGCTGAAGCAACCAGGAG------CTCCAAGGAGCTTACCTGGCA
dm3 chr2R:13907804-13907983 + AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGAAGACGACACCCCAGGGTGTGGGCTTATATAA---------TGCTC-A---AATGAATTCCGCAGGCGTTTGCGGCAGCTGAAGCAGACAGGAG------TTCCAAGGAGCTTACCTGGCA
droEre2 scaffold_4845:8135962-8136138 + AGGTTCCCTGCAAAATTTTAGCAGTGTGTCTGCTGCTCGTCGGCGCTCAGGTGAG-CATAC--C--A--------AGCCCACT-----------GAGAGGTGGAGATGG---CTCAGGGTGTGGGCTTATATAA---------TCCTC-A---AGTGAATTCCCCAGGCGTTTGCGGCAGTTGACGCAGCCAGGAG------TTCCAAGGAGCTTACCTGGCA
droYak3 2R:15271068-15271247 - AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGCGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGGAGGCGACACCCCCGGGTGTGGGCTTATATAA---------TCCTC-C---TATGAATTCACCAGGCGTTCGCCGCCGTTGACGCAGCCAGGAG------TTCCAAGGAGCTCACCTGGCA
droEug1 scf7180000409672:1182297-1182483 - AGGTTCTCTGCAAAATATTAACGGTGTGCTTGCTGCTAGTCGGCGCTCAGGTGAG-AATGG--C--A--------ATCCTCTCGAGAGAGTTGGT-TGAGT---GGCGGTAGTCTAGAGAAGCAGCTTATATAA---------TCCAT-A---AATGAATCCCTCAGGCGTTCGCGGCTGTTGAACCAGCCAAGAG------CTCCAAGGAGCTAACTTGGCA
droBia1 scf7180000301754:2633704-2633862 - AGGTTCCGTGCAAAATATTAACCGTGTGCCTGCTGCTCGTCGGCGCTCAGGTGAG-AATGC--C--A--------AGTCTCCA-----------GAG----------------------AAGCAGCTTATGTAA---------TCTGA-A--AAACAAATCCCCCAGGCGTTCGAGGCAATCCAACCAGCCAAGAG------CTCCAAGGAGCTCACCTGGCA
droTak1 scf7180000415795:260194-260370 + AGGTTCCGTGCAAAATATTAGCGGTGTGCTTGCTGCTCGTCGGCGCTCAGGTGAG-AATGG--C--GAAC-CTCAAGCCCCTT-----------GAGAGGTGAAGA------------GAAACAAGTTATATAA---------TCGCG--ACAAACGAATCCCCCAGGCGTTCGAGGCAGTTCAGCCAGCCAAGAG------CTCCAAGGACCTCGGCTGGCA
droEle1 scf7180000491214:301829-301990 - AGGTTCTCTGCAAAATTTTAACAGTGTGCCTGCTGCTCGGTGGCGCTCAGGTGAG-CATAC--C--G--------AA--------------------------------TACTCCAGAGAAGCAGCTTATATAATTCGTAAATTCCCC-GGTAAATAAATCCCCCAGGCGTTCACAAGGGCAGAGCCAG---------------CCAAGGAGCTCACTTGGCA
droRho1 scf7180000779949:197446-197625 - AGGTTCTCTGCAAATTTTTAACAGTGTGCTTGCTGCTTGCCGGCGCTCAGGTGAG-AATGC--C--GAAG-CCCAAA-CCCTT-----------GGAAGGTGGAGGGTGTACTCCAGAAAAGCAGCTTATATAA---------TCCTC-AATCCCCACATCCCTCAGGCCTTCACAAGAGCACAACCCG---------------CCAAGGAGCTCTCCTGGCA
droFic1 scf7180000453948:1527736-1527906 - AGGTTCTTTGCAAGTTTTTGACGCTCTGCTTGCTGCTCGTCGGCGCTCAGGTGAG-AGTGC--C--C--------CTCCTTTTC----------GAGGGGTGGAGT---AACTCCGGAAAATCAGCTTATATAA---------TCCGC-A---AATACAT-CCGCAGGCGTTCACGA------AATCGGCGGAGAG------TTCCAAGGAGCTGGTCTGGCA
droKik1 scf7180000302385:708765-708932 + AGGTTCTTTGCAAAATATTAGCGGTGTGCTCGCTGCTCGTCAGCGCCCAGGTGAG-ACCGG--A--A--------ATGCTTTT-----------AAGAAA---AGCTA-----------AAACACTTTATGCAA---------TCCCC-ACT-CTTTCATACTTCAGGCGTTCGCGGCAGTTGAACCATTCAAGAC------CTCCAAGGCGGACATCTTTCA
droAna3 scaffold_13266:10278505-10278664 - AGGTTCTCTGCAAAATTTTATTAGTGTGCTCACTGCTAGTCAGTGCCCAGGTAAA-TATTC--A--G--------GGCCTTTC-----------CATTTTT------------------GATCGTATTATATAA---------CACCGCA---GATA---TTTTAAGGCTTTCCAGGCCATCGAACCAGCCAAGGG------CTCCAAAAAGCTCCAATGGCA
droBip1 scf7180000396428:697011-697171 - AGGTTCTCGGCAAAATTTTATTATTGTGCTCACTGCTAGTCAGTGCCCAGGTAACAGATCA--C--A--------AGACCTTT-----------TAGAGAAG-----------------GATCGCGTTATATAA---------CACCG-------CTTTTTTTTAAGGCTTTCAAGGCCCTCGAACCACCCAAGAG------CTCAAACAAGCCGCAATGGCA
dp5 3:6373189-6373349 + AGGTTCTCTGCAAAATATTAGCAGTGTGCTCGCTGCTCGTCAGCGCTCAGGTAAG-AGAAGGCCGCAAAGGCAA-AGACTCCT-----------G--------------------------AAGAGTTATGTAA---------CAA-C-A---AGCAATTCTCATAGGCGTTTGTGGCTGTGGAGCCAGCCA---G------CTCCAGTGAGCTGTCTTGGAA
droPer2 scaffold_2:6589335-6589494 + AGGTTCTCTGCAAAATATTAGCAGTGTGCTCGCTGCTCGTCAGCGCTCAGGTAAG-AGAAGGCCGCAAAG-CAA-AGACTCCT-----------G--------------------------GAGAGTTATGTAA---------CAA-C-A---AGCAATTCTCATAGGCGTTTGTGGCTGTGGAGCCAGCCA---G------CTCGAGTGAGCTGTCTTGGAA
droWil2 scf2_1100000004558:2444938-2445111 + AGGTTCTATGCAAACTCCTGGTGGTTTGCTCGCTACTTTTTAGCGCCCAAGTAAG-TCTTG--T--C--------GCCACATT-----------TTTATCCTTATCCATC-----------GTCCATTATGTAA---------TTTGT-T---GATT-CTTCATTAGGCTTTTACTGCTGCTGAACCGAATACGAACTCCGTGTCCAATGGCTTCGGCTGGGA
droVir3 scaffold_12875:15211336-15211372 - AGGTTCTCTACAAACTGGTAGTGCTCTGCGCACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:8613982-8614027 + AGGTTCTCTGCAAAATTTTTGTGCTATTTGCACTGTTATTCAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:8125688-8125742 + AGGTTCTCTGCAAATTGCTGGTGCTCTGCGCACTGGTATTTAGCGCGAACGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGGAGACGGCACCCCAGGGTGTGGGCTTATATAA---------TCCTC-A---AATGAATTCCCCAGGCGTTCGCGGCGGCTGAAGCAACCAGCAG------CTCCAAGGAGCTTACCTGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................GTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................21118.0018015030000000000000
......................AGTTTGTCTGCTGCTCGTCGGTGCT................................................................................................................................................................................25111.0011010010000000000000
.......................GTTTGTCTGCTGCTCGTCGGTGCT................................................................................................................................................................................2419.00908000000000100000
.............................CTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2317.00707000000000000000
..........................TGTCTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2617.00706010000000000000
......................AGTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2216.00604020000000000000
...........................GTCTGCTGCTCGTCGGTGCT................................................................................................................................................................................2016.00606000000000000000
......................AGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1914.00403010000000000000
.......................GTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1814.00404000000000000000
..............ATTTTAGCAGTTTGTCTG...............................................................................................................................................................................................1814.00404000000000000000
..........................TGTCTGCTGCTCGTCGGT...................................................................................................................................................................................1814.00404000000000000000
....TCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................1813.00300030000000000000
..........................TGTCTGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2513.00301020000000000000
...........................GTCTGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2413.00303000000000000000
..............................TGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2212.00202000000000000000
.......................GTTTGTCTGCTGCTCGTCGGTGCG................................................................................................................................................................................2412.00202000000000000000
.........................TTGTCTGCTGCTCGTCGGTGCT................................................................................................................................................................................2212.00200200000000000000
.......................GTTTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2112.00202000000000000000
.GGTTCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................2112.00200020000000000000
.........................TTGTCTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2712.00202000000000000000
............................TCTGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2312.00202000000000000000
.......................GTTTGTCTGCTGCTCGTCGGG...................................................................................................................................................................................2112.00202000000000000000
.........................................................................................................................................................................GTTCGCGGCGGCTGAAGCAACCAGCA............................2611.00100010000000000000
.......................GTTTGTCTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2911.00101000000000000000
....................................................................................................................................................................................CTGAAGCAACCAGCAG------CT...................1811.00101000000000000000
.........................TTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................1911.00101000000000000000
..........................TGTCTGCTGCTCGTCGGTGCT................................................................................................................................................................................2111.00101000000000000000
........................TTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2011.00101000000000000000
.....................................................................................................................................................................................TGAAGCAACCAGCAG------CTCCAAGG.............2311.00100010000000000000
..........................TGTCTGCTGCTCGTCGGTGCTCAGAC...........................................................................................................................................................................2611.00101000000000000000
................TTTAGCAGTTTGTCTGCTGCT..........................................................................................................................................................................................2111.00101000000000000000
......................AGTTTGTCTGCTGCTCGTCGGG...................................................................................................................................................................................2211.00101000000000000000
...........................GTCTGCTGCTCGTCGGTGCTCAG.............................................................................................................................................................................2311.00101000000000000000
.............AATTTTAGCAGTTTGTCTG...............................................................................................................................................................................................1911.00101000000000000000
..............................TGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2111.00101000000000000000
................................................................................................................................................................................GCGGCTGAAGCAACCAGC.............................1811.00101000000000000000
........................TTTGTCTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2811.00101000000000000000
.........................................................................................................................................................................................GCAACCAGCAG------CTCCAAGGAGCT.........2311.00100010000000000000
............................TCTGCTGCTCGTCGGTGCC................................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................................GGCGGCTGAAGCAACCAGCA............................2011.00100010000000000000
............AAATTTTAGCAGTTTGTCTG...............................................................................................................................................................................................2011.00101000000000000000
............................................................................................................................................................................................................CCAAGGAGCTTACCTGGCA1911.00100010000000000000
...........................GTCTGCTGCTCGTCGGTG..................................................................................................................................................................................1811.00101000000000000000
........................TTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................1811.00100010000000000000
..........................................................................................................................................................................................................CTCCAAGGAGCTTACCTGGC.2011.00100010000000000000
.......................GTTTGTCTGCTGCTCGTCGGTGCTCAG.............................................................................................................................................................................2711.00101000000000000000
................TTTAGCAGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................2511.00100010000000000000
.............................CTGCTGCTCGTCGGTGCTC...............................................................................................................................................................................1911.00101000000000000000
.............................CTGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2211.00101000000000000000
.................................TGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................1911.00101000000000000000
..................................GCTCGTCGGTGCTCAGGC...........................................................................................................................................................................1820.50101000000000000000
droSec2
AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGAAGACGGCACCCCAGGGTGTGGGCTTATATAA---------TCCTC-A---AATGAATTCCCCAGGCGTTTGCGGCGGCTGAAGCAACCAGGAG------CTCCAAGGAGCTTACCTGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................CTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2314.0040040
.........................................................................................................................................................................GTTTGCGGCGGCTGAAGC....................................1814.0040040
.......................GTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1814.0040040
......................................................................................................................................................................................GAAGCAACCAGGAG------CTCCAAGGA............2312.0020200
.......................GTTTGTCTGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2812.0021100
.........................................................................................................................................................................GTTTGCGGCGGCTGAAGCAACCAGGA............................2612.0020020
......................................................................................................................................................................................GAAGCAACCAGGAG------CTCCAAGGAG...........2412.0020020
................................CTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2012.0020020
..................................GCTCGTCGGTGCTCAGGC...........................................................................................................................................................................1812.0020020
.......................GTTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................1912.0020020
.......................GTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2112.0020110
.......................GTTTGTCTGCTGCTCGTCGGTGCTC...............................................................................................................................................................................2511.0010010
......................AGTTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................2011.0010010
....TCCCTGCAAAATTTTAGCAGTTTGT..................................................................................................................................................................................................2511.0010010
..........................................................................................................................................................................................CAACCAGGAG------CTCCAAGG.............1811.0010010
..............ATTTTAGCAGTTTGTCTG...............................................................................................................................................................................................1811.0010010
..........................................................................................................................................................................................................CTCCAAGGAGCTTACCTGGC.2011.0010010
...........................GTCTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2511.0010010
.....................................................................................................................................................................AGGCGTTTGCGGCGGCTGAAGC....................................2211.0010010
..................................................................................................................................................................................GGCTGAAGCAACCAGGAG------CT...................2011.0010100
.......................GTTTGTCTGCTGCTCGTCGGTGCT................................................................................................................................................................................2411.0010001
...................................................................................................................................................................................................G------CTCCAAGGAGCTTACCTGGCA2211.0010010
...........................................................................................................................................................................................................TCCAAGGAGCTTACCTGGCA2011.0010010
........................................................................................................................................................................CGTTTGCGGCGGCTGAAGCAACCAGGA............................2711.0010010
...........................................................................................................................................................................................AACCAGGAG------CTCCAAGGA............1811.0010010
.............................................................................CCCACT-----------GAGAGGTGAAGACGGC.................................................................................................................2211.0010010
......................AGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1911.0010010
......................AGTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2211.0010010
.....................CAGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................2011.0010010
dm3
AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGAAGACGACACCCCAGGGTGTGGGCTTATATAA---------TGCTC-A---AATGAATTCCGCAGGCGTTTGCGGCAGCTGAAGCAGACAGGAG------TTCCAAGGAGCTTACCTGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................GTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010010000000000000000000000000210000000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTGGC.2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTGGCA2214.0040000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCT....1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTGG..2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................GCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................AGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................GGCAGCTGAAGCAGACAGGA............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAGCTGAAGCAGACAGGA............................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTG...1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000
....................................................................................................................................................................................CTGAAGCAGACAGGAG------TTCCAAGG.............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................AGTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................TCTGCTGCTCGTCGGTGCTCAGGT...........................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...........AAAATTTTAGCAGTTTGTCT................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTTCCCTGCAAAATTTTAGCA........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCTGAAGCAGACAGGAG------.....................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................GACAGGAG------TTCCAAGGAGCTTAAGC....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................CAGACAGGAG------TTCCAAGGA............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCTGAAGCAGACAGGAG------TTCCAAGG.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GCAGACAGGAG------TTCCAAGGA............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................GTTTGTCTGCTGCTCGTCGGTGC.................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GGAG------TTCCAAGGAGCTTACCTGGCA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CCAAGGAGCTTACCTGGCA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GACAGGAG------TTCCAAGGAG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........AAAATTTTAGCAGTTTGT..................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGCTCGTCGGTGCTCAGGTGAG-AATGC--C--A--------C...................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GAAGCAGACAGGAG------TTCCAAGGA............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GGAG------TTCCAAGGAGCTTACCTG...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGC--C--A--------AACCCACT-----------GAGAGGT..........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTCCAAGGAGCTTACCTGGCA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................AGCAGACAGGAG------TTCCAAGGA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................TGCTGCTCGTCGGTGCTCAG.............................................................................................................................................................................2011.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAGCTGAAGCAGACAGGAG------.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................GGCAGCTGAAGCAGACAG..............................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGTTTGTCTGCTGCTCGTCGGTG..................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTAGCAGTTTGTCTGCTGCTCGTCGGT...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGTCTGCTGCTCGTCGGTG..................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAGCTGAAGCAGACAGGAG------TTCCAAGG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.GGTTCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCAAAATTTTAGCAGTTTGT..................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGTGAG-AATGC--C--A--------AACCCACT-----------.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGTCTGCTGCTCGTCGGTGCTCAGG............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................GCTGAAGCAGACAGGAG------TTCCAAG..............2411.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCCCTGCAAAATTTTAGCA........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGGTTCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGTCTGCTGCTCGTCGGT...................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................GCGGCAGCTGAAGCAGACAGGA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCTGCTGCTCGTCGGTGCTCAGGC...........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GCAGCTGAAGCAGACAGGA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGTTTGTCTGCTGCTCGTCGG....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GCTCGTCGGTGCTCAGGC...........................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................CTC-A---AATGAATTCCGCAACG......................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGGTTCCCTGCAAAATTTTAGCAGTGTGTCTGCTGCTCGTCGGCGCTCAGGTGAG-CATAC--C--A--------AGCCCACT-----------GAGAGGTGGAGATGG---CTCAGGGTGTGGGCTTATATAA---------TCCTC-A---AGTGAATTCCCCAGGCGTTTGCGGCAGTTGACGCAGCCAGGAG------TTCCAAGGAGCTTACCTGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................GTTTGCGGCAGTTGACGCAGCCAGGA............................26127.002723400000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTGGCA22111.00115003120
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTGGC.2118.0083201110
..........................................................................................................................................................................TTTGCGGCAGTTGACGCAGCCAGGA............................2517.0073200200
.......................GTGTGTCTGCTGCTCGTC......................................................................................................................................................................................1816.0061001130
.......................GTGTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2115.0050104000
......................AGTGTGTCTGCTGCTCGTC......................................................................................................................................................................................1915.0051002020
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTGG..2014.0041001200
.................................TGCTCGTCGGCGCTCAGGC...........................................................................................................................................................................1914.0042100100
......................AGTGTGTCTGCTGCTCGTCGG....................................................................................................................................................................................2113.0030000120
......................AGTGTGTCTGCTGCTCGTCGGCG..................................................................................................................................................................................2313.0030002010
..................................GCTCGTCGGCGCTCAGGC...........................................................................................................................................................................1813.0032100000
...................................................................................................................................................................................................G------TTCCAAGGAGCTTACCTG...1912.0021001000
...........AAAATTTTAGCAGTGTGTCT................................................................................................................................................................................................2012.0020000020
.................................................................................................................................................................................CAGTTGACGCAGCCAGGA............................1812.0021001000
......................AGTGTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2212.0022000000
......................AGTGTGTCTGCTGCTCGTCG.....................................................................................................................................................................................2012.0021000010
.........................................................................................................................................................................GTTTGCGGCAGTTGACGCAGCCA...............................2312.0022000000
................................................................................................................................................................................GCAGTTGACGCAGCCAGGA............................1912.0022000000
........................TGTGTCTGCTGCTCGTCGGCG..................................................................................................................................................................................2111.0011000000
............AAATTTTAGCAGTGTGTCT................................................................................................................................................................................................1911.0010000100
........TGCAAAATTTTAGCAGTGTGTCTGC..............................................................................................................................................................................................2511.0011000000
.....CCCTGCAAAATTTTAGCAGTGTGTCTGCT.............................................................................................................................................................................................2911.0010100000
........................TGTGTCTGCTGCTCGTCGGCGCT................................................................................................................................................................................2311.0010000100
...................................................................................................................................................................................GTTGACGCAGCCAGGAG------TTCCAAC..............2411.0011000000
.......................................................................................................................................................................................ACGCAGCCAGGAG------TTCCAAGGA............2211.0011000000
.................TTAGCAGTGTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................TTGCGGCAGTTGACGCAGCCAGGA............................2411.0011000000
........................................................................................................................................................................................CGCAGCCAGGAG------TTCCAAGGA............2111.0010001000
.GGTTCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................2111.0011000000
.........................GTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................1911.0010000100
.......................GTGTGTCTGCTGCTCGTCGGCG..................................................................................................................................................................................2211.0010001000
.........................................................................................................................................................................GTTTGCGGCAGTTGACGCAGC.................................2111.0011000000
.........................................................................................................................................................................GTTTGCGGCAGTTGACGCAGCCAG..............................2411.0011000000
...................AGCAGTGTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2511.0011000000
..............ATTTTAGCAGTGTGTCTGCT.............................................................................................................................................................................................2011.0010000010
..............................................TCAGGTGAG-CATAC--C--A--------AGC.................................................................................................................................................1911.0010100000
............AAATTTTAGCAGTGTGTCTG...............................................................................................................................................................................................2011.0010000010
....................................................................................................................................................................CAGGCGTTTGCGGCAGTTGACG.....................................2211.0010000100
..............ATTTTAGCAGTGTGTCTG...............................................................................................................................................................................................1811.0010000010
....TCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................1811.0011000000
.........GCAAAATTTTAGCAGTGTGTCTGC..............................................................................................................................................................................................2411.0010100000
.......CTGCAAAATTTTAGCAGTGTGTCT................................................................................................................................................................................................2411.0010100000
.GGTTCCCTGCAAAATTTTAGCAGTGT....................................................................................................................................................................................................2611.0010000010
.......................GTGTGTCTGCTGCTCGTCGG....................................................................................................................................................................................2011.0010000010
droYak3
AGGTTCCCTGCAAAATTTTAGCAGTTTGTCTGCTGCTCGTCGGCGCTCAGGTGAG-AATGC--C--A--------AACCCACT-----------GAGAGGTGGAGGCGACACCCCCGGGTGTGGGCTTATATAA---------TCCTC-C---TATGAATTCACCAGGCGTTCGCCGCCGTTGACGCAGCCAGGAG------TTCCAAGGAGCTCACCTGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................G------TTCCAAGGAGCTCACCTGGC.21148.0048233401260000
........................................................................................................................................................................CGTTCGCCGCCGTTGACGCAGCCAGGA............................27119.0019090000000010
...................................................................................................................................................................................................G------TTCCAAGGAGCTCACCTGG..20117.001709000080000
.......................GTTTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................21114.001413100180000
............................................................................................................................................................................CGCCGCCGTTGACGCAGCCAGGA............................23112.0012011000010000
...................................................................................................................................................................................................G------TTCCAAGGAGCTCACCTGGCA22112.0012010001010000
.........................................................................................................................................................................GTTCGCCGCCGTTGACGCAGCCAGGAG------.....................2719.00900000000009
......................AGTTTGTCTGCTGCTCGTCGG....................................................................................................................................................................................2119.00901000170000
...................................................................................................................................................................................................G------TTCCAAGGAGCTCACCTG...1919.00907100100000
......................AGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1917.00704000030000
........................................................................................................................................................................CGTTCGCCGCCGTTGACGCAGCCAGG.............................2617.00701000000006
.........................................................................................................................................................................GTTCGCCGCCGTTGACGCAGCCAGGA............................2616.00606000000000
.......................GTTTGTCTGCTGCTCGTCGG....................................................................................................................................................................................2016.00602000130000
...........................................................................................................................................................................................................TCCAAGGAGCTCACCTGGC.1915.00505000000000
......................AGTTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................2015.00503000020000
........................................................................................................................................................................CGTTCGCCGCCGTTGACGC....................................1915.00514000000000
.......................GTTTGTCTGCTGCTCGTCGGCGCT................................................................................................................................................................................2415.00512010010000
.......................GTTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................1914.00402000020000
......................AGTTTGTCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2914.00410000000003
...............................................................................................................................................................................CGCCGTTGACGCAGCCAGGA............................2014.00403000010000
..GTTCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................2013.00301200000000
................................................................................................................................................................................GCCGTTGACGCAGCCAGGA............................1913.00303000000000
.............................CTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2213.00301000110000
............................................................................................................................................................................................................CCAAGGAGCTCACCTGGCA1913.00302001000000
.GGTTCCCTGCAAAATTTTAGC.........................................................................................................................................................................................................2113.00303000000000
...................................................................................................................................................................................GTTGACGCAGCCAGGAG------TT...................1913.00301000020000
..............................TGCTGCTCGTCGGCGCTCAGGC...........................................................................................................................................................................2213.00303000000000
...................................................................................................................................................................................GTTGACGCAGCCAGGAG------TTCCAAGGA............2613.00302000010000
.GGTTCCCTGCAAAATTTTAGCA........................................................................................................................................................................................................2213.00303000000000
..GTTCCCTGCAAAATTTTAGCA........................................................................................................................................................................................................2113.00303000000000
...TTCCCTGCAAAATTTTAGCA........................................................................................................................................................................................................2012.00202000000000
..........................TGTCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2512.00202000000000
..........................TGTCTGCTGCTCGTCGGC...................................................................................................................................................................................1812.00201000100000
...........................GTCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2412.00202000000000
...............................GCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2012.00202000000000
.................................TGCTCGTCGGCGCTCAGGC...........................................................................................................................................................................1912.00211000000000
..................................................................................................................................................................................................AG------TTCCAAGGAGCTCACCTGGCA2312.00201001000000
..........................................................................................................................................................................................................TTCCAAGGAGCTCACCTG...1812.00202000000000
.............................CTGCTGCTCGTCGGCGCTCAGGC...........................................................................................................................................................................2312.00202000000000
.......................GTTTGTCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2812.00201010000000
.......................GTTTGTCTGCTGCTCGTCGGCG..................................................................................................................................................................................2212.00201000010000
......................AGTTTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2212.00201000100000
...........................GTCTGCTGCTCGTCGGCGCTCAGGC...........................................................................................................................................................................2512.00202000000000
...........................................................................................................................................................................................................TCCAAGGAGCTCACCTGGCA2012.00202000000000
............................TCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2312.00202000000000
..................................................................................................................................................................................................AG------TTCCAAGGAGCTCACCT....1912.00202000000000
............................................................................................................................................................................CGCCGCCGTTGACGCAGCC................................1911.00101000000000
....................................................................................................................................................................CAGGCGTTCGCCGCCGTTGACGC....................................2311.00101000000000
................................................................................................................................................................................GCCGTTGACGCAGCCAGG.............................1811.00100000100000
.................................TGCTCGTCGGCGCTCAGG............................................................................................................................................................................1811.00100000100000
............AAATTTTAGCAGTTTGTCT................................................................................................................................................................................................1911.00100000010000
.....................CAGTTTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................2311.00110000000000
......................................................................................................................................................................GGCGTTCGCCGCCGTTGACGCAGCCAGGA............................2911.00101000000000
............................................................................................................................................................................CGCCGCCGTTGACGCAGCCAGG.............................2211.00101000000000
............................................................................................................................................................................................................CCAAGGAGCTCACCTGGC.1811.00101000000000
........................................................................................................................................................................................CGCAGCCAGGAG------TTCCAAGGAGC..........2311.00100000010000
..................................GCTCGTCGGCGCTCAGGC...........................................................................................................................................................................1811.00101000000000
.........................................................................................................................................................................GTTCGCCGCCGTTGACGCAGCCA...............................2311.00101000000000
...........AAAATTTTAGCAGTTTGTCT................................................................................................................................................................................................2011.00100000010000
...........AAAATTTTAGCAGTTTGTC.................................................................................................................................................................................................1911.00100000100000
......................................................................................................................................................................................GACGCAGCCAGGAG------TTCCAAGGA............2311.00101000000000
.......................GTTTGTCTGCTGCTCGTCGGCGCTCAG.............................................................................................................................................................................2711.00101000000000
.......................GTTTGTCTGCTGCTCGTCGGCGCTCA..............................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................GCCGCCGTTGACGCAGCCAGG.............................2111.00101000000000
...........................................................................................................................................................................................AGCCAGGAG------TTCCAAGGAGCT.........2111.00100000010000
........................TTTGTCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2711.00101000000000
.................TTAGCAGTTTGTCTGCTGCTCGTCG.....................................................................................................................................................................................2511.00101000000000
..........................................................................................................................................................................................................TTCCAAGGAGCTCACCTGGC.2011.00101000000000
...............................................................................................................................................................................................AGGAG------TTCCAAGGAGCTCACCT....2211.00101000000000
.......................................................................................................................................................................GCGTTCGCCGCCGTTGACGCA...................................2111.00101000000000
.........................TTGTCTGCTGCTCGTCGGCGCTCAGG............................................................................................................................................................................2611.00101000000000
..............ATTTTAGCAGTTTGTCTGCTGCT..........................................................................................................................................................................................2311.00101000000000
.............AATTTTAGCAGTTTGTCTGCTGCTCGTC......................................................................................................................................................................................2811.00100000010000
.........................TTGTCTGCTGCTCGTCGGCGCT................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................AG------TTCCAAGGAGCTCACCTGGC.2211.00101000000000
...................................................................................................................................................................................................G------TTCCAAGGAGCTCACCTGGT.2111.00100001000000
..........................................................................................................................................................................TTCGCCGCCGTTGACGCAGCCAGGA............................2511.00101000000000
.......................................................................................................................................................................GCGTTCGCCGCCGTTGACGC....................................2011.00101000000000
......................AGTTTGTCTGCTGCTCGTCGGCGCTCA..............................................................................................................................................................................2711.00101000000000
........................................................................................................................................................................................CGCAGCCAGGAG------TTCCAAGGAGCTCACCT....2911.00100000010000
...........................GTCTGCTGCTCGTCGGCGCTC...............................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................AG------TTCCAAGGAGCTCACCTGG..2111.00101000000000
.GGTTCCCTGCAAAATTTTAGCAGT......................................................................................................................................................................................................2411.00101000000000
.....................................................................................................................................................................................TGACGCAGCCAGGAG------TTCCAAGGA............2411.00101000000000
..............ATTTTAGCAGTTTGTCTGCTGCTCGTCGGC...................................................................................................................................................................................3011.00100000010000
........................................................................................................................................................................................CGCAGCCAGGAG------TTCCAAGGA............2111.00100000010000
.........................................................................................................................................................................GTTCGCCGCCGTTGACGC....................................1811.00101000000000
.......................GTTTGTCTGCTGCTCGTC......................................................................................................................................................................................1811.00100100000000
.........................TTGTCTGCTGCTCGTCGGCGCTCAGGC...........................................................................................................................................................................2711.00101000000000
..........................................................................................................................................................................................................TTCCAAGGAGCTCACCTGGCA2111.00101000000000
........................................................................................................................................................................CGTTCGCCGCCGTTGACGCAGCCAGGAC------.....................2811.00101000000000
droEug1
AGGTTCTCTGCAAAATATTAACGGTGTGCTTGCTGCTAGTCGGCGCTCAGGTGAG-AATGG--C--A--------ATCCTCTCGAGAGAGTTGGT-TGAGT---GGCGGTAGTCTAGAGAAGCAGCTTATATAA---------TCCAT-A---AATGAATCCCTCAGGCGTTCGCGGCTGTTGAACCAGCCAAGAG------CTCCAAGGAGCTAACTTGGCASizeHit CountTotal NormTotal
No Reads
droBia1
AGGTTCCGTGCAAAATATTAACCGTGTGCCTGCTGCTCGTCGGCGCTCAGGTGAG-AATGC--C--A--------AGTCTCCA-----------GAG----------------------AAGCAGCTTATGTAA---------TCTGA-A--AAACAAATCCCCCAGGCGTTCGAGGCAATCCAACCAGCCAAGAG------CTCCAAGGAGCTCACCTGGCASizeHit CountTotal NormTotal
No Reads
droTak1
AGGTTCCGTGCAAAATATTAGCGGTGTGCTTGCTGCTCGTCGGCGCTCAGGTGAG-AATGG--C--GAAC-CTCAAGCCCCTT-----------GAGAGGTGAAGA------------GAAACAAGTTATATAA---------TCGCG--ACAAACGAATCCCCCAGGCGTTCGAGGCAGTTCAGCCAGCCAAGAG------CTCCAAGGACCTCGGCTGGCASizeHit CountTotal NormTotal
No Reads
droEle1
AGGTTCTCTGCAAAATTTTAACAGTGTGCCTGCTGCTCGGTGGCGCTCAGGTGAG-CATAC--C--G--------AA--------------------------------TACTCCAGAGAAGCAGCTTATATAATTCGTAAATTCCCC-GGTAAATAAATCCCCCAGGCGTTCACAAGGGCAGAGCCAG---------------CCAAGGAGCTCACTTGGCASizeHit CountTotal NormTotal
No Reads
droRho1
AGGTTCTCTGCAAATTTTTAACAGTGTGCTTGCTGCTTGCCGGCGCTCAGGTGAG-AATGC--C--GAAG-CCCAAA-CCCTT-----------GGAAGGTGGAGGGTGTACTCCAGAAAAGCAGCTTATATAA---------TCCTC-AATCCCCACATCCCTCAGGCCTTCACAAGAGCACAACCCG---------------CCAAGGAGCTCTCCTGGCASizeHit CountTotal NormTotal
No Reads
droFic1
AGGTTCTTTGCAAGTTTTTGACGCTCTGCTTGCTGCTCGTCGGCGCTCAGGTGAG-AGTGC--C--C--------CTCCTTTTC----------GAGGGGTGGAGT---AACTCCGGAAAATCAGCTTATATAA---------TCCGC-A---AATACAT-CCGCAGGCGTTCACGA------AATCGGCGGAGAG------TTCCAAGGAGCTGGTCTGGCASizeHit CountTotal NormTotal
No Reads
droKik1
AGGTTCTTTGCAAAATATTAGCGGTGTGCTCGCTGCTCGTCAGCGCCCAGGTGAG-ACCGG--A--A--------ATGCTTTT-----------AAGAAA---AGCTA-----------AAACACTTTATGCAA---------TCCCC-ACT-CTTTCATACTTCAGGCGTTCGCGGCAGTTGAACCATTCAAGAC------CTCCAAGGCGGACATCTTTCASizeHit CountTotal NormTotal
No Reads
droAna3
AGGTTCTCTGCAAAATTTTATTAGTGTGCTCACTGCTAGTCAGTGCCCAGGTAAA-TATTC--A--G--------GGCCTTTC-----------CATTTTT------------------GATCGTATTATATAA---------CACCGCA---GATA---TTTTAAGGCTTTCCAGGCCATCGAACCAGCCAAGGG------CTCCAAAAAGCTCCAATGGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................TTCCAGGCCATCGAACCAGCCAAG.............................2413.003300000
......................AGTGTGCTCACTGCTAGTCAGT...................................................................................................................................................................................2212.002011000
...................................................................................................................................................................................ATCGAACCAGCCAAGGG------CTCCAAAA.............2512.002200000
........................................................................................................................................................................CTTTCCAGGCCATCGAACCAGCCAAG.............................2612.002200000
.........................GTGCTCACTGCTAGTCAGTGCCCAGGC...........................................................................................................................................................................2712.002020000
.....................................................................................................................................................................AGGCTTTCCAGGCCATCGAACCAGCCAAG.............................2912.002000002
...........................................................................................................................................................................TCCAGGCCATCGAACCAGCCAAG.............................2312.002200000
..................TATTAGTGTGCTCACTGCTA.........................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................GAACCAGCCAAGGG------CTCCAAAAAG...........2411.001100000
.........................................................................................................................................................................TTTCCAGGCCATCGAACCAGCCAAG.............................2511.001100000
..................................................................................................................................................................................................GG------CTCCAAAAAGCTCCAATGGC.2211.001010000
........................................................................................................................................................................................ACCAGCCAAGGG------CTCCAAAA.............2011.001100000
.........................GTGCTCACTGCTAGTCAG....................................................................................................................................................................................1811.001010000
......................................................................................................................................................................................GAACCAGCCAAGGG------CTCCAA...............2011.001100000
....................TTAGTGTGCTCACTGCTAGTCAGT...................................................................................................................................................................................2411.001010000
.......................GTGTGCTCACTGCTAGTCAGTGCC................................................................................................................................................................................2411.001010000
......................AGTGTGCTCACTGCTAGTCAG....................................................................................................................................................................................2111.001010000
....TCTCTGCAAAATTTTATTAGT......................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................TTCCAGGCCATCGAACCAG..................................1911.001100000
.................TTATTAGTGTGCTCACTGCTAGTCAGT...................................................................................................................................................................................2711.001001000
.................................................................................................................................................................................CCATCGAACCAGCCAAGGG------CTCCAAA..............2611.001010000
...................ATTAGTGTGCTCACTGCTAGTCAGTGCC................................................................................................................................................................................2811.001010000
...................ATTAGTGTGCTCACTGCTAGTCAG....................................................................................................................................................................................2411.001100000
...................................................................................................................................................................................ATCGAACCAGCCAAGGG------CTC..................2011.001100000
..................................................................................................................................................................................CATCGAACCAGCCAAGGG------CTCCAAAAA............2711.001010000
............AAATTTTATTAGTGTGCTCAC..............................................................................................................................................................................................2111.001010000
................................CTGCTAGTCAGTGCCCAGGC...........................................................................................................................................................................2011.001010000
..........................................................................................................................................................................TTCCAGGCCATCGAACCAGCC................................2111.001100000
...................................................................................................................................................................................ATCGAACCAGCCAAGGG------CTCCA................2211.001000010
.....................................................................................................................................................................................CGAACCAGCCAAGGG------CTCCAAAAA............2411.001100000
.......................................................................................................................................................................GCTTTCCAGGCCATCGAACC....................................2011.001100000
.......................................................................................................................................................................................AACCAGCCAAGGG------CTCCAAAAA............2211.001010000
...........AAAATTTTATTAGTGTGCT.................................................................................................................................................................................................1911.001001000
.......................................................................................................................................................................GCTTTCCAGGCCATCGAACCAGC.................................2311.001010000
........................................................................................................................................................................CTTTCCAGGCCATCGAACCA...................................2011.001100000
.......................................................................................................................................................................................AACCAGCCAAGGG------CTCCAAAA.............2111.001100000
................TTTATTAGTGTGCTCACTGCTAGTCAGT...................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................CATCGAACCAGCCAAGGG------CTCCAAAA.............2611.001100000
..........................................................................................................................................................................................................CTCCAAAAAGCTCCAATGGC.2011.001010000
........................................................................................................................................................................................ACCAGCCAAGGG------CTCCAAAAAGCTCCAAT....2911.001010000
........................................................................................................................................................................................ACCAGCCAAGGG------CTCCAAAAA............2111.001000010
.....................TAGTGTGCTCACTGCTAGTCAGC...................................................................................................................................................................................2311.001010000
..GTTCTCTGCAAAATTTTATTAGTGT....................................................................................................................................................................................................2511.001000010
...................................................................................................................................................................................ATCGAACCAGCCAAGGG------CTCCAAAAA............2611.001100000
...............TTTTATTAGTGTGCTCACTGCTAGTCAGT...................................................................................................................................................................................2911.001010000
..........................................................................................................................................................................TTCCAGGCCATCGAACCAGC.................................2011.001010000
.......CTGCAAAATTTTATTAGTGTGC..................................................................................................................................................................................................2211.001001000
droBip1
AGGTTCTCGGCAAAATTTTATTATTGTGCTCACTGCTAGTCAGTGCCCAGGTAACAGATCA--C--A--------AGACCTTT-----------TAGAGAAG-----------------GATCGCGTTATATAA---------CACCG-------CTTTTTTTTAAGGCTTTCAAGGCCCTCGAACCACCCAAGAG------CTCAAACAAGCCGCAATGGCASizeHit CountTotal NormTotal
No Reads
dp5
AGGTTCTCTGCAAAATATTAGCAGTGTGCTCGCTGCTCGTCAGCGCTCAGGTAAG-AGAAGGCCGCAAAGGCAA-AGACTCCT-----------G--------------------------AAGAGTTATGTAA---------CAA-C-A---AGCAATTCTCATAGGCGTTTGTGGCTGTGGAGCCAGCCA---G------CTCCAGTGAGCTGTCTTGGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCCA---............................23149.004904900000000
..........................................................................................................................................................................................................CTCCAGTGAGCTGTCTTGG..19123.002302300000000
...................................................................................................................................................................................................G------CTCCAGTGAGCTGTCTTGG..20122.002202200000000
......................................................................................................................................................................GGCGTTTGTGGCTGTGGAGCCAGCCA---............................26116.001601600000000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCC................................22114.001401400000000
.......................GTGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................21114.001401400000000
...................................................................................................................................................................................................G------CTCCAGTGAGCTGTCTTGGAA22113.001301300000000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCCA---G------CT...................26113.001301210000000
...................................................................................................................................................................................................G------CTCCAGTGAGCTGTCTTGGA.21112.001201000002000
............................................................................................................................................................................................................CCAGTGAGCTGTCTTGGAA19112.001201100001000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGC.................................21110.001001000000000
..........................................................................................................................................................................TTTGTGGCTGTGGAGCCAGCCA---............................2218.0080700001000
.................................TGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................1918.0080800000000
......................................................................................................................................................................GGCGTTTGTGGCTGTGGAGCCAGCC................................2518.0080800000000
......................................................................................................................................................................GGCGTTTGTGGCTGTGGAGCCAGC.................................2417.0070700000000
............................................................................................................................................................................................................CCAGTGAGCTGTCTTGGA.1816.0060600000000
......................AGTGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................2216.0060600000000
...............................................................................................................................................................................GGCTGTGGAGCCAGCCA---G------CT...................2015.0050500000000
................................................................................................................................................................................GCTGTGGAGCCAGCCA---G------CT...................1915.0050500000000
.....................................................................................................................................................................AGGCGTTTGTGGCTGTGGAGCCAGCCA---............................2714.0040100003000
......................................................................................................................................................................GGCGTTTGTGGCTGTGGAGCCAGCCA---G------.....................2714.0040300001000
.......................GTGTGCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2414.0040400000000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCCA---G------C....................2514.0040400000000
.........................GTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................1914.0040400000000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCCA---G------.....................2414.0040400000000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCCAGCCA---............................2413.0030300000000
......................AGTGTGCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2513.0030300000000
...............................................................................................................................................................................GGCTGTGGAGCCAGCCA---G------CTC..................2113.0030300000000
.................................TGCTCGTCAGCGCTCAGG............................................................................................................................................................................1813.0030300000000
......................AGTGTGCTCGCTGCTCGTCAG....................................................................................................................................................................................2113.0030300000000
...............................................................................................................................................................................GGCTGTGGAGCCAGCCA---G------CTCC.................2213.0030300000000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCCAGCCA---G------.....................2513.0030300000000
..............ATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2013.0030300000000
...............................................................................................................................................................................................A---G------CTCCAGTGAGCTGTCTTGGAA2313.0030300000000
..........................................................................................................................................................................................................CTCCAGTGAGCTGTCTTGGAA2113.0030300000000
........................TGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................2012.0020200000000
..............ATATTAGCAGTGTGCTCGCTGCTC.........................................................................................................................................................................................2412.0020200000000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCCAGCC................................2312.0020200000000
.......................GTGTGCTCGCTGCTCGTCA.....................................................................................................................................................................................1912.0020200000000
.............................................................................................................................................................................GTGGCTGTGGAGCCAGCCA---G------CTCCAGT..............2712.0020200000000
.......................................................................................................................................................................GCGTTTGTGGCTGTGGAGCCAGCCA---............................2512.0020200000000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGC.....................................1812.0020200000000
..GTTCTCTGCAAAATATTAGC.........................................................................................................................................................................................................2012.0020200000000
..........................................................................................................................................................................................................CTCCAGTGAGCTGTCTTGGA.2012.0020200000000
............AAATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2212.0020200000000
...........................................................................................................................................................................................................TCCAGTGAGCTGTCTTGG..1812.0020200000000
..............................................................................................................................................................................................CA---G------CTCCAGTGAGCTGTCTTG...2112.0020200000000
.......................................................................................................................................................................GCGTTTGTGGCTGTGGAGCC....................................2012.0020200000000
.........GCAAAATATTAGCAGTGTGCTCGCTGCT..........................................................................................................................................................................................2812.0020200000000
.......................GTGTGCTCGCTGCTCGTCAG....................................................................................................................................................................................2012.0020200000000
................................CTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2012.0020200000000
................ATTAGCAGTGTGCTCGCTGCTC.........................................................................................................................................................................................2212.0020200000000
...................................................................................................................................................................................................G------CTCCAGTGAGCTGTCTTG...1912.0020200000000
................ATTAGCAGTGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................2812.0020200000000
.................................................................................................................................................................................CTGTGGAGCCAGCCA---G------CT...................1812.0020200000000
.......................................................................................................................................................................................AGCCAGCCA---G------CTCCAGTGA............1912.0020200000000
.......................GTGTGCTCGCTGCTCGTC......................................................................................................................................................................................1812.0020200000000
.........GCAAAATATTAGCAGTGTGCTCGC..............................................................................................................................................................................................2412.0020200000000
.............................................................................................................................................................................GTGGCTGTGGAGCCAGCCA---G------.....................2012.0020200000000
......................................................................................................................................................................GGCGTTTGTGGCTGTGGAGCC....................................2112.0020200000000
...........AAAATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2312.0020200000000
......................AGTGTGCTCGCTGCTCGTCAGCGC.................................................................................................................................................................................2412.0020200000000
...............................................................................................................................................................................GGCTGTGGAGCCAGCCA---G------CTCCAGTGAGC..........2912.0020200000000
.....CTCTGCAAAATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2912.0020200000000
..GTTCTCTGCAAAATATTAGCA........................................................................................................................................................................................................2112.0020200000000
..............ATATTAGCAGTGTGCTCGC..............................................................................................................................................................................................1911.0010100000000
..GTTCTCTGCAAAATATTAGCAGT......................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................CTCCAGTGAGCTGTCTTG...1811.0010100000000
..............ATATTAGCAGTGTGCTCGCTGCT..........................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................TTTGTGGCTGTGGAGCCAGCCA---G------CT...................2511.0010100000000
....TCTCTGCAAAATATTAGCAGTGTGCTCG...............................................................................................................................................................................................2811.0010100000000
..........................................................................................................................................................................TTTGTGGCTGTGGAGCCAGC.................................2011.0010100000000
...........................GCTCGCTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2511.0010100000000
.........................GTGCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................GCGTTTGTGGCTGTGGAGCCA...................................2111.0010100000000
.......CTGCAAAATATTAGCAGTGTGCTC................................................................................................................................................................................................2411.0010100000000
.......CTGCAAAATATTAGCAGTGTGCTCGC..............................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................TGTGGCTGTGGAGCCAGCC................................1911.0010100000000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAG..................................2011.0010100000000
................................................................................................................................................................................GCTGTGGAGCCAGCCA---G------CTC..................2011.0010100000000
.........................GTGCTCGCTGCTCGTCAGCGC.................................................................................................................................................................................2111.0010100000000
............AAATATTAGCAGTGTGCTCGC..............................................................................................................................................................................................2111.0010100000000
...........................GCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2011.0010100000000
...........AAAATATTAGCAGTGTGCTCGC..............................................................................................................................................................................................2211.0010100000000
.........................GTGCTCGCTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2711.0010100000000
.............AATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2111.0010100000000
....................GCAGTGTGCTCGCTGCTCGTCAG....................................................................................................................................................................................2311.0010100000000
.......................GTGTGCTCGCTGCTCGTCAGCGCTCA..............................................................................................................................................................................2611.0010100000000
........TGCAAAATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2611.0010100000000
................................................................................................................................................................................GCTGTGGAGCCAGCCA---G------C....................1811.0010100000000
.........GCAAAATATTAGCAGTGTGCT.................................................................................................................................................................................................2111.0010100000000
..........................TGCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2111.0010100000000
............AAATATTAGCAGTGTGCTC................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................GCCAGCCA---G------CTCCAGTGAG...........1911.0010100000000
.GGTTCTCTGCAAAATATTAGC.........................................................................................................................................................................................................2111.0010100000000
.....CTCTGCAAAATATTAGCAGTGT....................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................TTGTGGCTGTGGAGCCAGCCA---G------CTC..................2511.0010100000000
...................................................................................................................................................................................GTGGAGCCAGCCA---G------CTCCAGTGAGC..........2511.0010100000000
...........AAAATATTAGCAGTGTGCT.................................................................................................................................................................................................1911.0010100000000
.........................GTGCTCGCTGCTCGTCAGCG..................................................................................................................................................................................2011.0010100000000
........TGCAAAATATTAGCAGTGTG...................................................................................................................................................................................................2011.0010100000000
..........CAAAATATTAGCAGTGTGCT.................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................AGGCGTTTGTGGCTGTGG........................................1811.0010100000000
.....................................................................................................................................................................AGGCGTTTGTGGCTGTGGAGCCAG..................................2411.0010100000000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCCAGC.................................2211.0010100000000
............................................................................................................................................................................TGTGGCTGTGGAGCCAGCCA---............................2011.0010100000000
.......................................................................................................................................................................GCGTTTGTGGCTGTGGAGCCAGCCA---G------C....................2711.0010100000000
.GGTTCTCTGCAAAATATTAGCA........................................................................................................................................................................................................2211.0010100000000
....................GCAGTGTGCTCGCTGCTCGTCA.....................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................GCGTTTGTGGCTGTGGAGCCAGCC................................2411.0010100000000
......TCTGCAAAATATTAGCAGTGTGCTCG...............................................................................................................................................................................................2611.0010100000000
................ATTAGCAGTGTGCTCGCTGCTCGT.......................................................................................................................................................................................2411.0010100000000
......................AGTGTGCTCGCTGCTCGT.......................................................................................................................................................................................1811.0010100000000
......................AGTGTGCTCGCTGCTCGTCAGCG..................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................TGTGGAGCCAGCCA---G------CTCCAGTGAGCT.........2711.0010100000000
.........................GTGCTCGCTGCTCGTCAG....................................................................................................................................................................................1811.0010100000000
.....................................................................................................................................................................AGGCGTTTGTGGCTGTGGAGCCAGCC................................2611.0010100000000
...........................................................................................................................................................................TTGTGGCTGTGGAGCCAGCCA---G------CT...................2411.0010100000000
...............................................................................................................................................................................................A---G------CTCCAGTGAGCTGTCTTGGA.2211.0010100000000
...........................................................................................................................................................................................................TCCAGTGAGCTGTCTTGGA.1911.0010100000000
....TCTCTGCAAAATATTAGCA........................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCC....................................1811.0010100000000
.............................TCGCTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................AGGCGTTTGTGGCTGTGGAGCCAGC.................................2511.0010100000000
...........................................................................................................................................................................TTGTGGCTGTGGAGCCAGCC................................2011.0010100000000
...............................................................................................................................................................................GGCTGTGGAGCCAGCCA---G------CTCCAGTGA............2711.0010100000000
..........CAAAATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2411.0010100000000
.................TTAGCAGTGTGCTCGCTGCT..........................................................................................................................................................................................2011.0010100000000
..........................TGCTCGCTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2611.0010100000000
.GGTTCTCTGCAAAATATTAGCAGT......................................................................................................................................................................................................2411.0010100000000
.....CTCTGCAAAATATTAGCA........................................................................................................................................................................................................1811.0010000100000
..............................CGCTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2211.0010100000000
......................AGTGTGCTCGCTGCTCGTCA.....................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCCA...................................2011.0010100000000
droPer2
AGGTTCTCTGCAAAATATTAGCAGTGTGCTCGCTGCTCGTCAGCGCTCAGGTAAG-AGAAGGCCGCAAAG-CAA-AGACTCCT-----------G--------------------------GAGAGTTATGTAA---------CAA-C-A---AGCAATTCTCATAGGCGTTTGTGGCTGTGGAGCCAGCCA---G------CTCGAGTGAGCTGTCTTGGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................AGTGTGCTCGCTGCTCGTCAG....................................................................................................................................................................................21110.0010811000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCCA---G------CT...................2615.005040001
............................................................................................................................................................................................................CGAGTGAGCTGTCTTGGAA1914.004021001
.......................GTGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................2113.003021000
............................................................................................................................................................................TGTGGCTGTGGAGCCAGC.................................1812.002200000
............................................................................................................................................................................TGTGGCTGTGGAGCCAGCC................................1912.002200000
......................AGTGTGCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2512.002200000
...........................................................................................................................................................................................................TCGAGTGAGCTGTCTTGG..1811.001010000
...............................................................................................................................................................................GGCTGTGGAGCCAGCCA---G------CT...................2011.001010000
.......................GTGTGCTCGCTGCTCGTCA.....................................................................................................................................................................................1911.001000001
.GGTTCTCTGCAAAATATTAGC.........................................................................................................................................................................................................2111.001010000
.................................TGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................1911.001010000
.....CTCTGCAAAATATTAGCAGTGTGCTCGC..............................................................................................................................................................................................2811.001010000
............................CTCGCTGCTCGTCAGCGCTCAGGC...........................................................................................................................................................................2411.001010000
...................................................................................................................................................................................................G------CTCGAGTGAGCTGTCTTGGA.2111.001010000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGCCA---............................2311.001010000
..........................................................................................................................................................................................................CTCGAGTGAGCTGTCTTGGA.2011.001100000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCCAGCCA---............................2411.001010000
.......................................................................................................................................................................GCGTTTGTGGCTGTGGAGCCAGC.................................2311.001010000
....................GCAGTGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................2411.001010000
.............AATATTAGCAGTGTGCTCGCT.............................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................GAGTGAGCTGTCTTGGAA1811.001010000
............................................................................................................................................................................TGTGGCTGTGGAGCCAGCCA---G------CT...................2311.001010000
................ATTAGCAGTGTGCTCGCTGCTCGTC......................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCA...................................1911.001010000
.......................GTGTGCTCGCTGCTCGTCAG....................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................GTGGCTGTGGAGCCAGCCA---G------CT...................2211.001010000
................ATTAGCAGTGTGCTCGCTGCTC.........................................................................................................................................................................................2211.001010000
................ATTAGCAGTGTGCTCGCTGCT..........................................................................................................................................................................................2111.001010000
......................AGTGTGCTCGCTGCTCGTCAGCGC.................................................................................................................................................................................2411.001010000
.......................GTGTGCTCGCTGCTCGTCAGCGCT................................................................................................................................................................................2411.001010000
........................................................................................................................................................................CGTTTGTGGCTGTGGAGCC....................................1911.001010000
......................AGTGTGCTCGCTGCTCGTCAGC...................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................GTTTGTGGCTGTGGAGCCAGC.................................2111.001010000
droWil2
AGGTTCTATGCAAACTCCTGGTGGTTTGCTCGCTACTTTTTAGCGCCCAAGTAAG-TCTTG--T--C--------GCCACATT-----------TTTATCCTTATCCATC-----------GTCCATTATGTAA---------TTTGT-T---GATT-CTTCATTAGGCTTTTACTGCTGCTGAACCGAATACGAACTCCGTGTCCAATGGCTTCGGCTGGGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................GTCCAATGGCTTCGGCTGGG.2016.00600060
..........................................................................................................................................................................................................GTCCAATGGCTTCGGCTGGGA2115.00500050
.....CTATGCAAACTCCTGGTGGT......................................................................................................................................................................................................2013.00301020
............AACTCCTGGTGGTTTGCTCGCT.............................................................................................................................................................................................2212.00200020
...................................................................................................................................................................................GCTGAACCGAATACGAACTCCGT.....................2312.00200110
......................................................................................................................................................................................GAACCGAATACGAACTCCGTGTCC.................2411.00101000
.......................................................................................................................................................................................AACCGAATACGAACTCCGTGT...................2111.00101000
.......................................................................................................................................................................................AACCGAATACGAACTCCGTGTC..................2211.00101000
.....................................................................................................................................................................................................TCCGTGTCCAATGGCTTCGGCTGGGA2611.00100010
................................CTACTTTTTAGCGCCCAAG............................................................................................................................................................................1911.00100100
..................................................................................................................................................................................TGCTGAACCGAATACGAACTCCGTGTC..................2711.00100010
.....................................................................................................................................................................................TGAACCGAATACGAACTCCGT.....................2111.00100010
AGGTTCTATGCAAACTCCTGGTGGTTTG...................................................................................................................................................................................................2811.00101000
..........................................................................................................................................................................................................GTCCAATGGCTTCGGCTGG..1911.00101000
..............CTCCTGGTGGTTTGCTCGC..............................................................................................................................................................................................1911.00100010
........................................................................................................................................................................CTTTTACTGCTGCTGAACCGA..................................2111.00101000
.............ACTCCTGGTGGTTTGCTCGCT.............................................................................................................................................................................................2111.00100010
.......................................................................................................................................................................GCTTTTACTGCTGCTGAAC.....................................1911.00101000
........................................................................................................................................................................................ACCGAATACGAACTCCGTGTCCAAT..............2511.00101000
....................................................................................................................................................................................................CTCCGTGTCCAATGGCTTCGGCT....2311.00100010
..........................................................................................................................................................................TTTACTGCTGCTGAACCGAATACGAA...........................2611.00100010
.......................................................................................................................................................................GCTTTTACTGCTGCTGAACC....................................2011.00101000
......................................................................................................................................................................................GAACCGAATACGAACTCCGT.....................2011.00100100
...........AAACTCCTGGTGGTTTGCTCGCT.............................................................................................................................................................................................2311.00100010
.............ACTCCTGGTGGTTTGCTC................................................................................................................................................................................................1811.00100010
..................................................................................................................................................................................TGCTGAACCGAATACGAACTCCGT.....................2411.00100100
.............ACTCCTGGTGGTTTGCTCG...............................................................................................................................................................................................1911.00100010
.............ACTCCTGGTGGTTTGCTCGC..............................................................................................................................................................................................2011.00100100
..............................................................................................................................................................................CTGCTGCTGAACCGAATACGAACTC........................2511.00101000
.....CTATGCAAACTCCTGGTGGTTT....................................................................................................................................................................................................2211.00100010
............AACTCCTGGTGGTTTGCTC................................................................................................................................................................................................1911.00100010
.......................................................................................................................................................................................AACCGAATACGAACTCCGTGTCC.................2311.00100010
.....CTATGCAAACTCCTGGTGGTT.....................................................................................................................................................................................................2111.00101000
droVir3
AGGTTCTCTACAAACTGGTAGTGCTCTGCGCACTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.GGTTCTCTACAAACTGGTAGT.........................................................................................................................................................................................................2117.007004200000000000100000000000000000000000000000000000000000000000
.GGTTCTCTACAAACTGGTA...........................................................................................................................................................................................................1914.004004000000000000000000000000000000000000000000000000000000000000
.....CTCTACAAACTGGTAGTGCTCTGCGCACC.............................................................................................................................................................................................2912.002000200000000000000000000000000000000000000000000000000000000000
...........AAACTGGTAGTGCTCTGCGCACT.............................................................................................................................................................................................2312.002001100000000000000000000000000000000000000000000000000000000000
.....CTCTACAAACTGGTAGTGCTCTGCGCACT.............................................................................................................................................................................................2912.002001100000000000000000000000000000000000000000000000000000000000
.GGTTCTCTACAAACTGGTAGTG........................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
.GGTTCTCTACAAACTGGT............................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
.....CTCTACAAACTGGTAGTGCTCTGCGCA...............................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......CTACAAACTGGTAGTGCTCTGCGCACT.............................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........AAACTGGTAGTGCTCTGCG.................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
............AACTGGTAGTGCTCTGCGCACTGC...........................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..........CAAACTGGTAGTGCTCTGCGCACT.............................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.GGTTCTCTACAAACTGGTAGTGCC......................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..GTTCTCTACAAACTGGTAGT.........................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............CTGGTAGTGCTCTGCGCACT.............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGGTTCTCTGCAAAATTTTTGTGCTATTTGCACTGTTATTCAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..GTTCTCTGCAAAATTTTTGTG........................................................................................................................................................................................................2117.007700000
..GTTCTCTGCAAAATTTTTGTGCTATTTGC................................................................................................................................................................................................2914.004400000
..GTTCTCTGCAAAATTTTTGTGCTATTTG.................................................................................................................................................................................................2812.002200000
..GTTCTCTGCAAAATTTTTGTGCTATT...................................................................................................................................................................................................2612.002200000
.......................CTATTTGCACTGTTATTCAGC...................................................................................................................................................................................2112.002200000
.......CTGCAAAATTTTTGTGCTATTTGCACT.............................................................................................................................................................................................2712.002200000
......................GCTATTTGCACTGTTATTC......................................................................................................................................................................................1912.002200000
......................GCTATTTGCACTGTTATTCAGC...................................................................................................................................................................................2211.001100000
............AAATTTTTGTGCTATTTGC................................................................................................................................................................................................1911.001100000
.GGTTCTCTGCAAAATTTTTGTG........................................................................................................................................................................................................2211.001100000
........................TATTTGCACTGTTATTCA.....................................................................................................................................................................................1811.001100000
......TCTGCAAAATTTTTGTGCTATTTG.................................................................................................................................................................................................2411.001100000
....TCTCTGCAAAATTTTTGTGCTATTTGC................................................................................................................................................................................................2711.001100000
........................TATTTGCACTGTTATTCAGCG..................................................................................................................................................................................2111.001100000
...TTCTCTGCAAAATTTTTGTGCTATT...................................................................................................................................................................................................2511.001100000
..GTTCTCTGCAAAATTTTTG..........................................................................................................................................................................................................1911.001100000
......................GCTATTTGCACTGTTATTCAGCG..................................................................................................................................................................................2311.001100000
.....CTCTGCAAAATTTTTGTGCTATTTGC................................................................................................................................................................................................2611.001100000
AGGTTCTCTGCAAAATTTTTGT.........................................................................................................................................................................................................2211.001100000
........TGCAAAATTTTTGTGCTATTTGC................................................................................................................................................................................................2311.001100000
.GGTTCTCTGCAAAATTTTT...........................................................................................................................................................................................................1911.001100000
..GTTCTCTGCAAAATTTTTGTGC.......................................................................................................................................................................................................2211.001100000
..GTTCTCTGCAAAATTTTTGTGCT......................................................................................................................................................................................................2311.001100000
...........AAAATTTTTGTGCTATTTGCACT.............................................................................................................................................................................................2311.001100000
....TCTCTGCAAAATTTTTGTGCTATT...................................................................................................................................................................................................2411.001100000
.GGTTCTCTGCAAAATTTTTGTGCTATTTG.................................................................................................................................................................................................2911.001100000
...TTCTCTGCAAAATTTTTGTGCTATTTGC................................................................................................................................................................................................2811.001100000
.........GCAAAATTTTTGTGCTATTTGCACT.............................................................................................................................................................................................2511.001100000
droGri2
AGGTTCTCTGCAAATTGCTGGTGCTCTGCGCACTGGTATTTAGCGCGAACGTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:38 AM