ID:dsi_19078 |
Coordinate:3r:10178665-10178814 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10178472_10178664_+]; CDS [3r_10178472_10178664_+]; intron [3r_10178665_10178973_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GGTGCTGATTTGGAGCTACCTTCGTGGTACGATGAGCAGCTATTCAAGCGGTAAGTTGCGTGACTAATTGTTCACTGGTTGCATATAAGCTATTTGCCATTTGTGTACGCACAATAGAAATAATTGTGATAATTACAATATCCATATACATAGGCTATTTATAAGCTTGGAGTTATGTAGCAGTTTGCTATGTGAATAATTATGCGAAAATTTTGTATCTACGGGTTTACATATTAATAACAAAGTGCGA **************************************************((...(((((((.......((...((.((((((((((((((((..(((...((((((..((((((.......))))))................))))))..))).....))).)))))....))))))))))...)))))))))...))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
O001 Testis |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| ...........................TACGATGAGCAGCTATTC............................................................................................................................................................................................................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ......................CGTGGTACGATGAGCAGCG................................................................................................................................................................................................................. | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..TGCTGATCTGGAGATACCTT.................................................................................................................................................................................................................................... | 20 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 |
|
CCACGACTAAACCTCGATGGAAGCACCATGCTACTCGTCGATAAGTTCGCCATTCAACGCACTGATTAACAAGTGACCAACGTATATTCGATAAACGGTAAACACATGCGTGTTATCTTTATTAACACTATTAATGTTATAGGTATATGTATCCGATAAATATTCGAACCTCAATACATCGTCAAACGATACACTTATTAATACGCTTTTAAAACATAGATGCCCAAATGTATAATTATTGTTTCACGCT
**************************************************((...(((((((.......((...((.((((((((((((((((..(((...((((((..((((((.......))))))................))))))..))).....))).)))))....))))))))))...)))))))))...))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
M025 embryo |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................ACAGGCGTGATATCTTTAT................................................................................................................................ | 19 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................AGCACCATGCTCCTCG..................................................................................................................................................................................................................... | 16 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................................CGTCAAACGATCCACTCA..................................................... | 18 | 2 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..............................................................................................................TGTTATCTTTACCGACACTAT....................................................................................................................... | 21 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................................................ATCGGCAAACGATAC.......................................................... | 15 | 1 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................................................................................................................................AATTCTTGTTTCACGC. | 16 | 1 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................................................................................................................................TAAAGCCTAGATGCCCAA....................... | 18 | 2 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................................................................AGGTATATGTAGCAGA.............................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 10:36 AM