ID:

dsi_19015

 Coordinate:

x:8538140-8538357 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.5 -30.4 -30.3

Flybase annnotation

exon [x_8538358_8538609_-]; CDS [x_8538358_8538609_-]; exon [x_8537981_8538139_-]; CDS [x_8537981_8538139_-]; intron [x_8538140_8538357_-]

Repeatable elements

NameClassFamilyStrand
A-richLow_complexityLow_complexity+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAGTCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCTTTATAGTTAAACTTAGGTTTTAATGTATTTTAATTATAATTGCAATCAATTTAGTTAGTTTAGTTTAGTTGAGTTAATATTTTCTCTTGATTTCTATACTTTTGCTAATTTTTCGTTCTGGCTCCTGCCTTCTGTTTTCATTCATTTTTTATGTATAATTTCGATTGGCCCATCTTCGTTCCGAATTGCGATTTTGATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGAC
**************************************************((((((((((..(((((((((((..((.((....)).)).)))))))))))..)))........(((((((..(((.(((..(((((((.........)))))))))).)))...))))))).........(((....))).............(((.....))).........))))))).((...((((........))))...))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 M023
head
 M024
male body		 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
..............TCGACAGACGCAGCGAGTTTGTGCGC...................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................CGAAACAAATTTCGCGG.. 17 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TCGTTCTGGCTCCTACC............................................................................................................................... 17 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................CGTGCCGAAACAAATTTAGCGG.. 22 1 1 1.00 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................CTAATTTTTCGTTCTGGCTCC................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0
.................ACAGAGGCAGAGAGGTTGTGCG....................................................................................................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 1 0
........CGACGATCGTCAGACGCAGC.................................................................................................................................................................................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 1 0 0
.........................................GGCAGGAGAGTAAGTCTGCC................................................................................................................................................................................................................................................................. 20 3 4 0.25 1 1 0 0 0 0 0 0 0
.........GACGATCGTCAGACGCAGC.................................................................................................................................................................................................................................................................................................. 19 2 5 0.20 1 0 0 0 0 0 1 0 0
........................................................CTCCCTGTATAGTTAAA..................................................................................................................................................................................................................................................... 17 2 6 0.17 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TCTTGATTGTCCCATCTTCG.............................................................................. 20 3 9 0.11 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TCGTTCCGGCTCCTACC............................................................................................................................... 17 2 9 0.11 1 0 1 0 0 0 0 0 0
......................................GCCAGCAAAAGAGTTGGT...................................................................................................................................................................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0 0 0 0
..................................................................AGTTAAACTTACGTTT............................................................................................................................................................................................................................................ 16 1 12 0.08 1 0 0 0 0 0 0 0 1
..................CATACGCAGCGGGCTTGTG......................................................................................................................................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATCAGCGAGCCGCTAGCTGTCTGCGTCGCTCAAACACGCGGTCGTTCTCTCAATCAGACGGAAATATCAATTTGAATCCAAAATTACATAAAATTAATATTAACGTTAGTTAAATCAATCAAATCAAATCAACTCAATTATAAAAGAGAACTAAAGATATGAAAACGATTAAAAAGCAAGACCGAGGACGGAAGACAAAAGTAAGTAAAAAATACATATTAAAGCTAACCGGGTAGAAGCAAGGCTTAACGCTAAAACTATCATTGTCACGGTTTTTAAGATTATGTTGCGGTAGCACGGCTTTGTTTAAAGCGCCTG
**************************************************((((((((((..(((((((((((..((.((....)).)).)))))))))))..)))........(((((((..(((.(((..(((((((.........)))))))))).)))...))))))).........(((....))).............(((.....))).........))))))).((...((((........))))...))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
......................................................................................................................................................................................................................................GGCTAGAAGTAAAGCTTAAC.................................................................... 20 3 15 0.20 3 3 0 0 0
............................................................................TCCAAAATCACATACAAT................................................................................................................................................................................................................................ 18 2 6 0.17 1 0 1 0 0
............................................................................................................................................................................................................................AGAACTAACAGGGTAGAAGC.............................................................................. 20 3 9 0.11 1 0 0 1 0
.........................................................................................................................................................................................................................................TAGAAGCACGGCTAAA..................................................................... 16 2 20 0.05 1 1 0 0 0
..........................................................................................................................................................................AAAAAGCTAGACCGGCGACG................................................................................................................................ 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8538090-8538407 - dsi_19015 TAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCT--------------TTATAGT--TAAACTTAGGTTTTAATGT--------------------------------------------------A------------TTTTAATTAT---------------------------------------AATTG----CAATCAAT-------------TTA-------GTTAGTTTAGTTTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-CTTGA--------------TTTCTATACTTTTGCTAATTTTTCGTTCTGGCT--CCTGCCTTCTGTTTTCAT-TCATT---------TTT-----TATGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGAC
droSec2 scaffold_14492:166-483 - TAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCT--------------TTATAGT--TAAACTTAGGTTTTAATGT--------------------------------------------------A------------TTTTAATTAT---------------------------------------AATTG----CAATCAAT-------------TTA-------GTTAGTTTAGTTTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-CTTGA--------------TTTCTATACTTTTGCTAATTTTTCGTTCTGGCT--CCTGCCTTCTGTTTTCAT-TCATT---------TTT-----TATGCATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAGTAACAGTGCCAAAAATTTTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGAC
dm3 chrX:8991497-8991838 - CAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCT--------------TTATAGT--TAATCTTAGGTTTTAATGT--------------------------------------------------A----------------AATTAT-----T-GTTTCAC---------ATTTGCAATGCCAATGATTTGCCATCAATCAAT-------------GTA-------------TTAGTTTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-CTTGA--------------TTTCTATACTTTTGCTAATTTTTCGTTTTGGCT--CTTGCCTTCTGTTTTCAT-TCATT---------TTTTTTTGTATGTATAATTTCG------------A-TTG-GCCCCATCATCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGAC
droEre2 scaffold_4690:6125411-6125771 + CAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTCTGCCTTTTTGCCCTTCACTTTATAGT--TAACCTTCGATTTTAATGC--------------------------------------------------AAGGCCTCGTT-TTTTT-----C---------------------------------------AATTG----CAATCAATGTGTACTTCACATTTA-------GTTAGTTTAGTTTATAGC---------AAGTCCATATTGAG-------------------------------------------------------------------------------------------------------------TTCATA----------------------------------------------------------------------------------------TTTT-T-CATAA--------------TTTGTATACTTTT-CTAATTTTTCGTTCTGGCT--CTTGCCTTCTGTTTTCAT-TCATT---------TCT-----TATGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGATATGCGATA-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACCAACTTCGCGGAC
droYak3 X:12324826-12325195 + CAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTTTGCCTTTTTCTCCTCCACTTTATAGT--TAAT--TAG----------------------------TTAG----------------------------------------TTTTT-----CAATATTGGTTACAC---------TTTTGCCATGCCAATGAATTG----CAATCAGCGTATATTTCACA-TCA-------GTTAGTTGAGTTAAT--T---------AA--CTACTTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTAA-T-CTTAA--TT----------TCTCTATACTTTTGCTAATTTTTCGTTTTGGCT--CCTGCCTTCTGTTTTCAT-TCATT---------TTT-----TATGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGATCTGCGAAT-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACCAACTTCGCGGAC
droEug1 scf7180000409631:403133-403528 - CAG---CCGCTCGGCGATCGACAGACGCAGCGAGTTTGTTCGCCAGCAAGAGAGTTAGTCTGCCATTTGGT-TTATAAATAATAGT--TAATTCTCGTTTTTACTGA--------------------------------------------------AGGGT-GCAGATT----------------------ATTATAGTATTTCTT-----------GATTTT----CAAACAG-----------------AAT----------TTCGATCA---------------------GTTGAGTTCCAAAGCA-CCCTTCAG------------------------------------CACGTCCATTGAAATTTAATTAGTTATATAAGTTTACCCTT----------------TTA----------------------------------------------------------------------------------------TTACCT-CTTAT--------------TTTGTATAATTTTGTTAATGTTACGTTCTGGTT--TTTGCCTTCTGTTTTCAT-TCATT---------TA------AACGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCTATATGCGATG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGAT
droBia1 scf7180000301760:4590243-4590424 - TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----------------------------------------------------------------------------------------CTAGCT-CTTCC--------------TTTCTATACTTTTGTTAATTTTACGTTCTGGTT--CTTGCCTTCTGTTTTCAT-TCATT---------TCG-----TACGTATAATTTCG------------A-TTG-GCC-CACCTTCG-------T-----------TCCGCAATGCGATG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGCGCCGAAACCAACTTCGCGGAC
droTak1 scf7180000415843:774451-774628 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCCTTGT--------------TTTGTATACTTTTATTAACTTTACTTTCTGGTT-TCTTGCCTTCTGTTTTCAT-TCATT---------TCT-----TACGTATAATTTCG------------A-TTG-GCC-CACCTTCG-------T-----------TCCGAAATGCGATT-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGAC
droEle1 scf7180000491006:2506948-2507126 - TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCT-CTTGA--------------TTTCTATACTTTTGTTAATTTTTCGTTCTGGTT--CTTGCCTTCTGTTTTCAT-TCATT---------TCT-----TGCGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAAATGCGACG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGAA
droRho1 scf7180000779841:516492-516761 - TT------------------------------------------------------AGTTCATTT--------------TTGAAGC--TTACCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG------------------------------------CACGTCGATTTATATTGAATTATTTAAATAATTTTACAAATTAAGATTTGGTTGTTCATACG--------------------------------------------------TTG---------------------------------TTTTCT-ATTTA--------------TTTGTATACTTTTGTTAATTTTACGTTCTGGTT--CTTGCCTTCTGTTTTCAT-TCATT---------TTT-----TGCGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAAATGCGACG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGAC
droFic1 scf7180000453829:959768-960165 - CAG---CCGCTCGGCGATCGACAGACGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTCCCCCAATTGGC----CACTTAAAAGT--CTAT--T-------------------CAAATAATTAGTTCACTTTCTTTCAATTGAGTTAACATTCTGAAGGTG-GC--------------------------------------------------------------------------------------------------------TTAAA--TCCAGTCTTT-------------------AATCCCATCTTCGGAAAATGATTTCTGTTAGATTATTTTAAACATTTTTTCACTTCC---------------------------------------TTTGG------ATAAG--------------------------------------------------TTA---------------------------------TTATCT-CTTAA--------------TTTTAATACTTTTGTTAACTTTACGTTCTGGCT--TTTGCCTTCTGTTTTCATTTCATT---------TTT----GTGTGTATAATTTCG------------A-TTG-GCC-CATCCTCG-------T-----------TCCGAAATGCGATG-TT-G-------------ATAGTAACAGTGCCAAAAATTCTCATACAACGCCATCGTGCCGAAACCAACTTCGCGGAC
droKik1 scf7180000301542:52047-52406 - CAGTACTAGATCGGCGATCGACAGGCGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTTCTTAT-----------AT-ATATATTTCTATTTTTCGGTTTTAATTTCATTTTA-----------------------------------------AAAGGTT-TTTTTTT----------------------AGTTTAGTAGTTCTC-----------GCCTTG----CAATCAAA-------------TCA---------------------------------------------------------------------------------------------------------------------------------AAAACTCTTAGAAATGATG-------------------------------------------------TTTTCATGTTAGAAACTGTTA---------------------------------TT---TTCTT-A---------------TTTTAAACTTTTGTTAATTTTACTTTCTTGCT--TTTCTTTTCTCTT-----------------------------ACATTTCATTTCC------------A-TTA-TTT-TATTATCG-------TGTACTCGTGTATTGGCAATGCAATCCTT-GA------------TTAGTAACAGTGCCAAAAATTCTCATCCAACGCCATCGTGCCGACACAAATTTTGCTGAA
droAna3 scaffold_13047:803210-803474 - CAA---CCGCTCGGCGATCGACAGGCGCAGCGAGTTTGTTCGCCAGCAAGAGAGTTAGTCTCAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAG-----------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTTG---------------------------------------TTA----TTTTTAATTTGTCGCAGTTT--------TTAATT---------------------------TAATTTTTTGTAACGATTATGTTGTTTTCTGTTTTCAT-TTCTTACGT-ACACCTT-----TGTATATGATTTCG------------A-TTG-ATT-ATCCGCCG-------A-----------T-TGCGTTGCAAAT-CC-G-------------ATAGTAACCGTGCCAAAAATTCTCATCCAACGCCATCGCGCGGAAACCAACTTTGCGGAC
droBip1 scf7180000396431:587694-587955 - CAA---CCGCTCGGCGATCGACAGGCGCAGCGAGTTTGTTCGCCAGCAAGAGAGTTAGTCTCCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG-----------------A-T-----------------------------------CCCT---------------------------------------------------------------------------------------------------------------------------------------A--TTTTG---------------------------------------TTG----AT-TTAATTTATT----TCT--------TTTATT------------------TAATTT----CGTTTAACGATTTCGTT--C---TTTTCTGTTTTAAT-TTCTTGCAT-AAACTTT-----TGTGTATGATTTCG------------A-TTG-ATT-ATCCACCG-------A-----------T-TGCGTTGCAAAC-CC-G-------------ATAGTAACCGTGCCAAAAATTCTCATCCAACGCCATCGCGCGGAAACCAACTTTGCCGAC
dp5 XL_group1e:6992963-6993228 + GAA---CCGCACGACCATCGATAGACGCAGCGAGTTTGTTCGCCAGCACGAGAGTTAGTTTTCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCCACCCTGCATACCATTCG---------------------------------------TTT----CTTTTAATTCG----AATTT-AGTCT-CTTAATT-------------TGATATATTTT---------------------------CGTTCTCTTTTCAT-TTGTGTTGTTGCA------------ATATGATTTCTTTGGGGATTTGGTTCTGGAAA-ATATTGTAAAT---------------------AATGCA-----T-A-------------ATAGTAACGGTGCCAAAAATTCTCATCCAACGCCATCGGGCGGAAACCAATTTTGCGGAC
droPer2 scaffold_13:1561198-1561467 - GAA---CCGCACGACCATCGATAGACGCAGCGAGTTTGTTCGCCAGCACGAGAGTTAGTTTCCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCCCCCCTGCATACCATTCG---------------------------------------TATTAATTTTTTAATTCG----AATTT-AGTCT-CTTAATT-------------TGATATA---------------------------TTTACGTTCTCTTTTCAT-TTGTGTCGTTGCA------------ATATGATTTCTTTGGGGATTTGGTTCTGGAAA-ATATTGTAAAT---------------------AATGCA-----T-A-------------ATAGTAACGGTGCCAAAAATTCTCATCCAACGCCATCGGGCGGAAACCAATTTTGCGGAC
droWil2 scf2_1100000004590:2060113-2060380 - TGG---ACGTTTGGCCGTCGACAGGCGCAGCGAATTTGTGCGACAACAAGAGAGTTAGTATCTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAA----------------A-TGATAG-TAGATGGGTTTAT--TT--GTC------------------------TCCCTTC--------------------------------------------------------TTTATTATTTACATTGCTTTGAGTATGATG----------------------------------------------------------------------------------------------------------A-T-T------------------------------------------------------TTATTTTCATTTTAATT-TTCTTTCATTTCATTGT-----TATCTTTGGTTTC----------------TG-GTT-TATTATTG-------T-----------T-TTAATTGAACAA-CA-A-------------TTAGTAACTGTGCCCAAAATTCTAATTCAACGCCATCGTGCGGAAACAAATTTCGCGGAA
droVir3 scaffold_12970:9311476-9311740 - dvi_13750 CAG---CCGTTCGGCCATCGATCGCCGCAGCGAATTTGTGCGCCAGCAAGAGAGTTAGTTCCCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC---------------------------------------------------------------------AAAGCA-TAC---------------------------------------------------------------------GCATTTTATAGAT---------------------TCCCC-------GCC---CGTTTTGTAGTTGGTTCTCA--------------------------------------------------------------------------------------------TTTTAGTATCTGTTT--TTTTATTTTTGTTTCTTT-TCT-------------T-----TTCGTTTCGTTTTG------------G-TTG-AAC-CTTTTGCG-------T-----------TCT---TTGCACAC-CT-----TCAAATAACTAAAGTAACAGTGCCCAAAATTCTCATCCAACGGCATCGTCCGGACACAAACTTTGCGGAC
droMoj3 scaffold_6473:13336481-13336740 + CAG---CCGCTCGGCCATCGATCGCCGCAGCGAGTTCGTGCGCCAGCAAGAGAGTTAGTCCTCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGCACACTTTTCC---------------------------------------TTTGTTCGCTCCGATTCG----GTGC--TAA-T-CTTAA--TTTCTCTCTTCTTTTGTATGCTT----TATCATTTCGTTTTGGTT-------------------------------------------------------------------------G-ACA-CTTTTGCGATTTGTTT-----------T---GTTTGCACCA-CTTGA--TCAAATACCCAAAGTAACTGTGCCCAAAATTCTCATTCAACGCCATCGCGTGGACACCAATTTTGCGGAC
droGri2 scaffold_15203:314058-314309 - CAG---CCGATCGGCTATCGATCGCCGCAGCGAGTTCGTGCGCCAGCAAGAGAGTTAGTCCCTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTCCAT-------ATT---CATTTTGTAGT-GGCACTAATTTTGGTATTTATTTTTATTTTTGGTTCGATTCGATTCG---------------------------------------------------------------------------------------------------------G-----TTGGTTTCATTTTG-----------GT-TTG-ATC-CTTTTACG-------T-----------TTTCACTTGCACTG-TTTGGTGTCAAA---CTAAAGTAACCGTTCCCAAAATTCTCATTCAACGCCATCGTGCGGAAACTAATTTTGCGGAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCT--------------TTATAGT--TAAACTTAGGTTTTAATGT--------------------------------------------------A------------TTTTAATTAT---------------------------------------AATTG----CAATCAAT-------------TTA-------GTTAGTTTAGTTTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-CTTGA--------------TTTCTATACTTTTGCTAATTTTTCGTTCTGGCT--CCTGCCTTCTGTTTTCAT-TCATT---------TTT-----TATGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................TCGACAGACGCAGCGAGTTTGTGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACAAATTTCGCGG..1711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTTTTCGTTCTGGCT--CC..................................................................................................................................................................................................2111.00110000000000000000
droSec2
TAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCT--------------TTATAGT--TAAACTTAGGTTTTAATGT--------------------------------------------------A------------TTTTAATTAT---------------------------------------AATTG----CAATCAAT-------------TTA-------GTTAGTTTAGTTTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-CTTGA--------------TTTCTATACTTTTGCTAATTTTTCGTTCTGGCT--CCTGCCTTCTGTTTTCAT-TCATT---------TTT-----TATGCATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAGTAACAGTGCCAAAAATTTTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACGCCATCGTGCCGAAACA............2520.5011000
...............................GAGTTTGTGCGCCAGCAAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100
.......................GACGCAGCGAGTTTGTGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100
.AG---TCGCTCGGCGATCGACAGACGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010010
.......................GACGCAGCGAGTTTGTGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
...............................GAGTTTGTGCGCCAGCAAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010010
dm3
CAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTGCGCCAGCAAGAGAGTTAGTCTGCCT--------------TTATAGT--TAATCTTAGGTTTTAATGT--------------------------------------------------A----------------AATTAT-----T-GTTTCAC---------ATTTGCAATGCCAATGATTTGCCATCAATCAAT-------------GTA-------------TTAGTTTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-CTTGA--------------TTTCTATACTTTTGCTAATTTTTCGTTTTGGCT--CTTGCCTTCTGTTTTCAT-TCATT---------TTTTTTTGTATGTATAATTTCG------------A-TTG-GCCCCATCATCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACAAATTTCGCGGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTGCCGAAACAAATTTCGCGGA.2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACGCAGCGAGTTTGTGCGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGATT-TT-G-------------ATAGTAACAGTGC...............................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------T-----------TCCGAATTGCGATT-TT-G-------------AT..........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------T-----------TCCGAATTGCGATT-TT-G-------------ATAG........................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTAATACAACGCCATCGT.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.AG---TCGCTCGGCGATCGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGGCGATCGACAGACGCAGCGAGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCG-------T-----------TCCGAATTGCGACA-.............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......TCGCTCGGCGATCGACAGACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATT-TT-G-------------ATAGTAACAGTGC...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGATT-TT-G-------------ATAGTAACAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CTCGGCGATCGACAGACGCAGCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AG---TCGCTCGGCGATCGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCG-------T-----------TCCGAATTGCGATT-TT-G-------------ATAG........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAATTGCGATT-TT-G-------------ATAG........................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCTCGGCGATCGACAGACGCAGCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCAGCGAGTTTGTGCGCCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................CCAGCAAGAGAGTTAGTCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGTGCGCCAGCAAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCG-------T-----------TCCGAATTGCGATT-TT-G-------------AT..........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAATTCTAATACAACGC...........................2011.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTTGTGCGCCAGCAAGAGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGACGCAGCGAGTTTGTGCGCCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................T--------------------------------------------------A----------------AATTAT-----T-GTTTCAC---------ATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTTGGCT--CTTGCCTTC...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCCTTCTGTTTTCAT-TC...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCGAGTTTGTGCGCCAGCAAGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACAACGCCATCGTGCCGAAAC.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGCTCGGCGATCGACAGACGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTGTGCGCCAGCAAGAGAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................GAGTTTGTGCGCCAGCAAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGTTTGTGCGCCAGCAAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTGTGCGCCAGCAAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTATAATTTCG------------A-T..............................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCTCGGCGATCGACAGACGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................TTA---------------------GTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTTTCT-..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTAACAGTGCCAAAAAT........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTTTGTGCGCCAGCAAGAGATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-TCATT---------TTTTTTTGTATCA......................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
CAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTCTGCCTTTTTGCCCTTCACTTTATAGT--TAACCTTCGATTTTAATGC--------------------------------------------------AAGGCCTCGTT-TTTTT-----C---------------------------------------AATTG----CAATCAATGTGTACTTCACATTTA-------GTTAGTTTAGTTTATAGC---------AAGTCCATATTGAG-------------------------------------------------------------------------------------------------------------TTCATA----------------------------------------------------------------------------------------TTTT-T-CATAA--------------TTTGTATACTTTT-CTAATTTTTCGTTCTGGCT--CTTGCCTTCTGTTTTCAT-TCATT---------TCT-----TATGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGATATGCGATA-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACCAACTTCGCGGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAATACAACGCCATCGTGCCGAAAC.............2711.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACGCCATCGTGCCGAAACCA...........2511.0011000000
..........TCGGCGATCGACAGACGCAGCGAGTTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.....................CAGACGCAGCGAGTTTGTCCGCCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATACAACGCCATCGTGCCGAAACC............2611.0011000000
................ATCGACAGACGCAGCGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................GACGCAGCGAGTTTGTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
CAG---TCGCTCGGCGATCGACAGACGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTTTGCCTTTTTCTCCTCCACTTTATAGT--TAAT--TAG----------------------------TTAG----------------------------------------TTTTT-----CAATATTGGTTACAC---------TTTTGCCATGCCAATGAATTG----CAATCAGCGTATATTTCACA-TCA-------GTTAGTTGAGTTAAT--T---------AA--CTACTTTGAG-------------------------------------------------------------------------------------------------------------TTAATA----------------------------------------------------------------------------------------TTAA-T-CTTAA--TT----------TCTCTATACTTTTGCTAATTTTTCGTTTTGGCT--CCTGCCTTCTGTTTTCAT-TCATT---------TTT-----TATGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGATCTGCGAAT-TT-G-------------ATAGTAACAGTGCCAAAAATTCTAATACAACGCCATCGTGCCGAAACCAACTTCGCGGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACGCCATCGTGCCGAAACC............2411.00100000010000
..................................................................................................................................................................................................................ATGCCAATGAATTG----CAATCAGCGTATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGCCATCGTGCCGAAAC.............2111.00100000010000
.............................GCGAGTTTGTCCGCCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000
.........................CGCAGCGAGTTTGTCCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................ATCGACAGACGCAGCGAGTTTGTCCGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAATACAACGCCATCG......................1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACGCCATCGTGCCG.................1911.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCGAAACCAACTTCGCGGAC2411.00101000000000
..................................................................................................................................................................................................................ATGCCAATGAATTG----CAATCAGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEug1
CAG---CCGCTCGGCGATCGACAGACGCAGCGAGTTTGTTCGCCAGCAAGAGAGTTAGTCTGCCATTTGGT-TTATAAATAATAGT--TAATTCTCGTTTTTACTGA--------------------------------------------------AGGGT-GCAGATT----------------------ATTATAGTATTTCTT-----------GATTTT----CAAACAG-----------------AAT----------TTCGATCA---------------------GTTGAGTTCCAAAGCA-CCCTTCAG------------------------------------CACGTCCATTGAAATTTAATTAGTTATATAAGTTTACCCTT----------------TTA----------------------------------------------------------------------------------------TTACCT-CTTAT--------------TTTGTATAATTTTGTTAATGTTACGTTCTGGTT--TTTGCCTTCTGTTTTCAT-TCATT---------TA------AACGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCTATATGCGATG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGATSizeHit CountTotal NormTotal
No Reads
droBia1
TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----------------------------------------------------------------------------------------CTAGCT-CTTCC--------------TTTCTATACTTTTGTTAATTTTACGTTCTGGTT--CTTGCCTTCTGTTTTCAT-TCATT---------TCG-----TACGTATAATTTCG------------A-TTG-GCC-CACCTTCG-------T-----------TCCGCAATGCGATG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGCGCCGAAACCAACTTCGCGGACSizeHit CountTotal NormTotal
No Reads
droTak1
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCCTTGT--------------TTTGTATACTTTTATTAACTTTACTTTCTGGTT-TCTTGCCTTCTGTTTTCAT-TCATT---------TCT-----TACGTATAATTTCG------------A-TTG-GCC-CACCTTCG-------T-----------TCCGAAATGCGATT-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGACSizeHit CountTotal NormTotal
No Reads
droEle1
TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCT-CTTGA--------------TTTCTATACTTTTGTTAATTTTTCGTTCTGGTT--CTTGCCTTCTGTTTTCAT-TCATT---------TCT-----TGCGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAAATGCGACG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGAASizeHit CountTotal NormTotal
No Reads
droRho1
TT------------------------------------------------------AGTTCATTT--------------TTGAAGC--TTACCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG------------------------------------CACGTCGATTTATATTGAATTATTTAAATAATTTTACAAATTAAGATTTGGTTGTTCATACG--------------------------------------------------TTG---------------------------------TTTTCT-ATTTA--------------TTTGTATACTTTTGTTAATTTTACGTTCTGGTT--CTTGCCTTCTGTTTTCAT-TCATT---------TTT-----TGCGTATAATTTCG------------A-TTG-GCC-CATCTTCG-------T-----------TCCGAAATGCGACG-TT-G-------------ATAGTAACAGTGCCCAAAATTCTCATACAACGCCATCGTGCCGAAACCAATTTCGCGGACSizeHit CountTotal NormTotal
No Reads
droFic1
CAG---CCGCTCGGCGATCGACAGACGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTCCCCCAATTGGC----CACTTAAAAGT--CTAT--T-------------------CAAATAATTAGTTCACTTTCTTTCAATTGAGTTAACATTCTGAAGGTG-GC--------------------------------------------------------------------------------------------------------TTAAA--TCCAGTCTTT-------------------AATCCCATCTTCGGAAAATGATTTCTGTTAGATTATTTTAAACATTTTTTCACTTCC---------------------------------------TTTGG------ATAAG--------------------------------------------------TTA---------------------------------TTATCT-CTTAA--------------TTTTAATACTTTTGTTAACTTTACGTTCTGGCT--TTTGCCTTCTGTTTTCATTTCATT---------TTT----GTGTGTATAATTTCG------------A-TTG-GCC-CATCCTCG-------T-----------TCCGAAATGCGATG-TT-G-------------ATAGTAACAGTGCCAAAAATTCTCATACAACGCCATCGTGCCGAAACCAACTTCGCGGACSizeHit CountTotal NormTotal
No Reads
droKik1
CAGTACTAGATCGGCGATCGACAGGCGCAGCGAGTTTGTCCGCCAGCAAGAGAGTTAGTTCTTAT-----------AT-ATATATTTCTATTTTTCGGTTTTAATTTCATTTTA-----------------------------------------AAAGGTT-TTTTTTT----------------------AGTTTAGTAGTTCTC-----------GCCTTG----CAATCAAA-------------TCA---------------------------------------------------------------------------------------------------------------------------------AAAACTCTTAGAAATGATG-------------------------------------------------TTTTCATGTTAGAAACTGTTA---------------------------------TT---TTCTT-A---------------TTTTAAACTTTTGTTAATTTTACTTTCTTGCT--TTTCTTTTCTCTT-----------------------------ACATTTCATTTCC------------A-TTA-TTT-TATTATCG-------TGTACTCGTGTATTGGCAATGCAATCCTT-GA------------TTAGTAACAGTGCCAAAAATTCTCATCCAACGCCATCGTGCCGACACAAATTTTGCTGAASizeHit CountTotal NormTotal
No Reads
droAna3
CAA---CCGCTCGGCGATCGACAGGCGCAGCGAGTTTGTTCGCCAGCAAGAGAGTTAGTCTCAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAG-----------------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTTG---------------------------------------TTA----TTTTTAATTTGTCGCAGTTT--------TTAATT---------------------------TAATTTTTTGTAACGATTATGTTGTTTTCTGTTTTCAT-TTCTTACGT-ACACCTT-----TGTATATGATTTCG------------A-TTG-ATT-ATCCGCCG-------A-----------T-TGCGTTGCAAAT-CC-G-------------ATAGTAACCGTGCCAAAAATTCTCATCCAACGCCATCGCGCGGAAACCAACTTTGCGGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................CGACAGGCGCAGCGAGTTTGTTCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........GCTCGGCGATCGACAGGCGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCAAAT-CC-G-------------ATAGTAACCGTGCC..............................................2811.001010000
...............GATCGACAGGCGCAGCGAGTTTGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCAAAAATTCTCATCCAAC.............................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCCAACGCCATCGCGCG..................2111.001100000
..A---CCGCTCGGCGATCGACAGGCGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGCCATCGCGCGGAAACC............2211.001010000
droBip1
CAA---CCGCTCGGCGATCGACAGGCGCAGCGAGTTTGTTCGCCAGCAAGAGAGTTAGTCTCCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG-----------------A-T-----------------------------------CCCT---------------------------------------------------------------------------------------------------------------------------------------A--TTTTG---------------------------------------TTG----AT-TTAATTTATT----TCT--------TTTATT------------------TAATTT----CGTTTAACGATTTCGTT--C---TTTTCTGTTTTAAT-TTCTTGCAT-AAACTTT-----TGTGTATGATTTCG------------A-TTG-ATT-ATCCACCG-------A-----------T-TGCGTTGCAAAC-CC-G-------------ATAGTAACCGTGCCAAAAATTCTCATCCAACGCCATCGCGCGGAAACCAACTTTGCCGACSizeHit CountTotal NormTotal
No Reads
dp5
GAA---CCGCACGACCATCGATAGACGCAGCGAGTTTGTTCGCCAGCACGAGAGTTAGTTTTCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCCACCCTGCATACCATTCG---------------------------------------TTT----CTTTTAATTCG----AATTT-AGTCT-CTTAATT-------------TGATATATTTT---------------------------CGTTCTCTTTTCAT-TTGTGTTGTTGCA------------ATATGATTTCTTTGGGGATTTGGTTCTGGAAA-ATATTGTAAAT---------------------AATGCA-----T-A-------------ATAGTAACGGTGCCAAAAATTCTCATCCAACGCCATCGGGCGGAAACCAATTTTGCGGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGCCATCGGGCGGAAACC............2212.0020002000000
...............CATCGATAGACGCAGCGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............GACCATCGATAGACGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAACGCCATCGGGCGGAAACCA...........2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTCATCCAACGCCATCGGG....................2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTCATCCAACGCCATCGG.....................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCAACGCCATCGGGCGGAAACC............2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCCAACGCCATCGGGCGGAAACC............2611.0010001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAAATTCTCATCCAACGC...........................2211.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAAACCAATTTTGCGG..1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCATCGGGCGGAAACC............2111.0010001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTCATCCAACGCCATC.......................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACGCCATCGGGCGGAAACCAAT.........2611.0010001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTCTTTGGGGATTTGG.................................................................................................................................2011.0010000010000
.......CGCACGACCATCGATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATCGGGCGGAAACCAATTTTGCGGA.2811.0010100000000
droPer2
GAA---CCGCACGACCATCGATAGACGCAGCGAGTTTGTTCGCCAGCACGAGAGTTAGTTTCCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCCCCCCTGCATACCATTCG---------------------------------------TATTAATTTTTTAATTCG----AATTT-AGTCT-CTTAATT-------------TGATATA---------------------------TTTACGTTCTCTTTTCAT-TTGTGTCGTTGCA------------ATATGATTTCTTTGGGGATTTGGTTCTGGAAA-ATATTGTAAAT---------------------AATGCA-----T-A-------------ATAGTAACGGTGCCAAAAATTCTCATCCAACGCCATCGGGCGGAAACCAATTTTGCGGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTCATCCAACGCCATCGGGC...................2411.001100000
.................TCGATAGACGCAGCGAGTTTGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
........GCACGACCATCGATAGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATCCAACGCCATCGGGCGGAAACCA...........2811.001010000
GAA---CCGCACGACCATCGATAGACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.........CACGACCATCGATAGACGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
............GACCATCGATAGACGCAGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droWil2
TGG---ACGTTTGGCCGTCGACAGGCGCAGCGAATTTGTGCGACAACAAGAGAGTTAGTATCTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAA----------------A-TGATAG-TAGATGGGTTTAT--TT--GTC------------------------TCCCTTC--------------------------------------------------------TTTATTATTTACATTGCTTTGAGTATGATG----------------------------------------------------------------------------------------------------------A-T-T------------------------------------------------------TTATTTTCATTTTAATT-TTCTTTCATTTCATTGT-----TATCTTTGGTTTC----------------TG-GTT-TATTATTG-------T-----------T-TTAATTGAACAA-CA-A-------------TTAGTAACTGTGCCCAAAATTCTAATTCAACGCCATCGTGCGGAAACAAATTTCGCGGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCAACGCCATCGTGC...................1911.00100010
.............................GCGAATTTGTGCGACAACAAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................GTCGACAGGCGCAGCGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
............................AGCGAATTTGTGCGACAACAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCAACGCCATCGTGCGGAAACA............2511.00101000
...............CGTCGACAGGCGCAGCGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
droVir3
CAG---CCGTTCGGCCATCGATCGCCGCAGCGAATTTGTGCGCCAGCAAGAGAGTTAGTTCCCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC---------------------------------------------------------------------AAAGCA-TAC---------------------------------------------------------------------GCATTTTATAGAT---------------------TCCCC-------GCC---CGTTTTGTAGTTGGTTCTCA--------------------------------------------------------------------------------------------TTTTAGTATCTGTTT--TTTTATTTTTGTTTCTTT-TCT-------------T-----TTCGTTTCGTTTTG------------G-TTG-AAC-CTTTTGCG-------T-----------TCT---TTGCACAC-CT-----TCAAATAACTAAAGTAACAGTGCCCAAAATTCTCATCCAACGGCATCGTCCGGACACAAACTTTGCGGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTCTTT-TCT-------------T-----TTCGTTTCGTT................................................................................................................................................2512.002000002000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTTT-TCT-------------T-----TTCGTT.....................................................................................................................................................1921.503000000100000000000000000000000000000000000000000000000000000002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................C-------GCC---CGTTTTGTAGTTGGTTCT...................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATCCAACGGCATCGTCCGGACA..............2611.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACGGCATCGTCCGGACACAAACT........2711.001000000000000000000100000000000000000000000000000000000000000000
.....................................................GTTAGTTCCCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC---------------------------------------------------------------------AAAGCA-TAC---------------------------------------------------------------------GC.......................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTCATCCAACGGCATCG......................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATCCAACGGCATCGTCCGGACACA............2811.001001000000000000000000000000000000000000000000000000000000000000
...............................GAATTTGTGCGCCAGCAAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGGCATCGTCCGGACAC.............2111.001010000000000000000000000000000000000000000000000000000000000000
.................................ATTTGTGCGCCAGCAAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACGGCATCGTCCGGACA..............2111.001100000000000000000000000000000000000000000000000000000000000000
........GTTCGGCCATCGATCGCCGCAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCATCCAACGGCATCGTCCGGACA..............2711.001001000000000000000000000000000000000000000000000000000000000000
.............GCCATCGATCGCCGCAGCGAATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................ATCGATCGCCGCAGCGAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGTCCGGACACAAACTTTGC....2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTCTCATCCAACGGC..........................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................TTTGTGCGCCAGCAAGAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTTT-TCT-------------T-----TTCGTTT....................................................................................................................................................2021.002000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGGACACAAACTTTGCGGAC2311.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCATCGTCCGGACACAAACT........2311.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCATCCAACGGCATCGTCCGGACAC.............2711.001001000000000000000000000000000000000000000000000000000000000000
................................AATTTGTGCGCCAGCAAGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................CGCCGCAGCGAATTTGTGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGTCCGGACACAAAC.........1811.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCGTCCGGACACAAAC.........2111.001001000000000000000000000000000000000000000000000000000000000000
..............................CGAATTTGTGCGCCAGCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCCGGACACAAACTTTGC....2211.001000000000000000000000000000000000000000000000000000000000001000
....................................TGTGCGCCAGCAAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTTT-TCT-------------T-----TTCGTT.....................................................................................................................................................1820.501000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTTT-TCT-------------T-----TTCGT......................................................................................................................................................1820.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
CAG---CCGCTCGGCCATCGATCGCCGCAGCGAGTTCGTGCGCCAGCAAGAGAGTTAGTCCTCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAGCACACTTTTCC---------------------------------------TTTGTTCGCTCCGATTCG----GTGC--TAA-T-CTTAA--TTTCTCTCTTCTTTTGTATGCTT----TATCATTTCGTTTTGGTT-------------------------------------------------------------------------G-ACA-CTTTTGCGATTTGTTT-----------T---GTTTGCACCA-CTTGA--TCAAATACCCAAAGTAACTGTGCCCAAAATTCTCATTCAACGCCATCGCGTGGACACCAATTTTGCGGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTTTTCC---------------------------------------TTTGTTCGCT..................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCATTCAACGCCATCGCGT...................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTCGCTCCGATTCG----GTGC--TAA-T-CT........................................................................................................................................................................................................................................................2811.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCATTCAACGCCATCG......................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTCATTCAACGCCATCG......................2111.001100000
............................AGCGAGTTCGTGCGCCAGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
CAG---CCGATCGGCTATCGATCGCCGCAGCGAGTTCGTGCGCCAGCAAGAGAGTTAGTCCCTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTCCAT-------ATT---CATTTTGTAGT-GGCACTAATTTTGGTATTTATTTTTATTTTTGGTTCGATTCGATTCG---------------------------------------------------------------------------------------------------------G-----TTGGTTTCATTTTG-----------GT-TTG-ATC-CTTTTACG-------T-----------TTTCACTTGCACTG-TTTGGTGTCAAA---CTAAAGTAACCGTTCCCAAAATTCTCATTCAACGCCATCGTGCGGAAACTAATTTTGCGGACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 06:56 PM