ID:dsi_18958 |
Coordinate:3r:4354941-4355005 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_4354761_4354940_+]; CDS [3r_4354761_4354940_+]; CDS [3r_4355006_4355460_+]; exon [3r_4355006_4355460_+]; intron [3r_4354941_4355005_+]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------################################################## GGGACAACACCATCAAGATCTGGGATCGCACGGATTTGCAGTGCGTTAAGGTAGCTTTCGACATAGTCAATCCATAAGATTTTGATTATTAACACACTCCCCCCCCGAATTCCAGACCCTAATGGGCCACACTGGATCGGTGCTGTGCCTGCAGTATGACGACAA **************************************************............((((((((...........))))))))..........................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
M053 female body |
SRR902008 ovaries |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................CGGATTTGCAGTGCGTTAAGACC................................................................................................................ | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................ATCTGGGATCGCACGGATTTGCAGTGC......................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................ACGGATTTGCAGTGCGTTAAGACC................................................................................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................TGGGATCGCACGGATTTGCAGTGCGT....................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................ATCGGTGCTGTGCCTGCAGTATGAC..... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..............................CGGATTTGCAGTGCGTTAAG................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................TCGGTGCTGTGCCTGCAGTATGACGACA. | 28 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...ACAACACCATCAAGA................................................................................................................................................... | 15 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................ACTGGATTGGTGCTGAG.................. | 17 | 2 | 12 | 0.08 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................TATTAACACAATCCC................................................................ | 15 | 1 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................................................TAATGGGCCTCACCGG.............................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .................................................................................................................................................GGCCTGAAGTATTACGAC.. | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
|
CCCTGTTGTGGTAGTTCTAGACCCTAGCGTGCCTAAACGTCACGCAATTCCATCGAAAGCTGTATCAGTTAGGTATTCTAAAACTAATAATTGTGTGAGGGGGGGGCTTAAGGTCTGGGATTACCCGGTGTGACCTAGCCACGACACGGACGTCATACTGCTGTT
**************************************************............((((((((...........))))))))..........................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M023 head |
|---|---|---|---|---|---|---|---|
| .........................................................................................................................TACCCGGTGGGACCTA............................ | 16 | 1 | 4 | 0.25 | 1 | 1 | 0 |
| ..........................................................................................................................................CCACGAGATGGAGGTCATA........ | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 |
Generated: 04/24/2015 at 02:45 AM