ID:

dsi_18925

 Coordinate:

3l:12109844-12110104 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.9 -35.8 -35.8

Flybase annnotation

exon [3l_12110105_12110309_-]; CDS [3l_12110105_12110309_-]; exon [3l_12109784_12109843_-]; CDS [3l_12109784_12109843_-]; intron [3l_12109844_12110104_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCACCGCCAAGGAGAAGGCGGTCACCACAGTCAATTTGGCCTCGACGAAGGTGAGTCCTGCGCCTCAGCTCTTATATCTTTCAGATTTTGATTCCTTATTTGCCTATTCTCTTCGATTTGGTTCAATGTAATGTTGATTTTGTATTCTGTTGGTTTATTGTTAGCCTGTCGATTAGTTTTAAATAATTTAAAGCTGTAGAAACCCACTTTAAAAGAGAGAAAAATCCCTTTAGCTAATCCCCACATTTGTTTGTTTAATTAGTACAACTTATTATTTGTATTATTTATTTGCATCCTTTTTTTGGTTGTAGATTAAAGAGGGAACTCTGCTAGATTCCGTACAAAGCGGAGTTACCGATGT
**************************************************(((((..(((.....)))..))))).((((((...((((((.......(((((.........(((((..(((((((((.(((...((........)).....))))))))..)))).)))))..(((((((((...))))))))))))))........)))))))))))).......((.(((((((..........(((.....(((.((((((((........)))))))).)))...)))........))))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.................................................................................................................................................................................................................................................................................................................ACGAAGATTAAAGAGGGAACTCTGCT.............................. 26 3 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................TTATTGTTAGCCTGTCGATTAGTTTTA.................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................CTGCTAGATTCCGTACAAAGCGGAG.......... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................GCTGATTTTGTATTCTG.................................................................................................................................................................................................................... 17 1 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................GAGGGAACTCTGCTAGATTCC....................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................AAGAATTAAAAGCTGTAGAA................................................................................................................................................................ 20 2 4 0.25 1 0 0 1 0 0 0 0 0
.................................................................................................................................AATGGTGATTTTATATTCTTTT.................................................................................................................................................................................................................. 22 3 8 0.13 1 0 0 0 0 0 0 1 0
............AGAGGGCGATCACCACGGT.......................................................................................................................................................................................................................................................................................................................................... 19 3 17 0.12 2 0 0 0 0 2 0 0 0
....................................................................................................................................................................................................................................................................................................................AAGATTAAAGAGGGA...................................... 15 1 12 0.08 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................AGGGAAGTCGGCGAGATTC........................ 19 3 18 0.06 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................GGGGAATTAGTACAACTTA.......................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0
............................................................................................................................ATTGTAATGTTGATT.............................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................................................................................TGTCTGGTTGTAGGTTAAA............................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1
.............GAGGGCGCTTACCACAGT.......................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

CGTGGCGGTTCCTCTTCCGCCAGTGGTGTCAGTTAAACCGGAGCTGCTTCCACTCAGGACGCGGAGTCGAGAATATAGAAAGTCTAAAACTAAGGAATAAACGGATAAGAGAAGCTAAACCAAGTTACATTACAACTAAAACATAAGACAACCAAATAACAATCGGACAGCTAATCAAAATTTATTAAATTTCGACATCTTTGGGTGAAATTTTCTCTCTTTTTAGGGAAATCGATTAGGGGTGTAAACAAACAAATTAATCATGTTGAATAATAAACATAATAAATAAACGTAGGAAAAAAACCAACATCTAATTTCTCCCTTGAGACGATCTAAGGCATGTTTCGCCTCAATGGCTACA
**************************************************(((((..(((.....)))..))))).((((((...((((((.......(((((.........(((((..(((((((((.(((...((........)).....))))))))..)))).)))))..(((((((((...))))))))))))))........)))))))))))).......((.(((((((..........(((.....(((.((((((((........)))))))).)))...)))........))))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
...........................................................................................................AGAGAAGCTAGACCAAATTA.......................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................GTCTGAGACTATGGAATAAAC................................................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0
...........................................................TGCGGAGTCGAGAATATAGAAA........................................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AGACGATCTAAGTCATGTGTA............... 21 3 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TATTATCTCTCTTTTTATGGAA................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0
....................AAGTGGTGTCGGTTAAACCAGA............................................................................................................................................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................................................AGCATGATTCGCCTTAATGG..... 20 3 3 0.33 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................GCATGATTCGCCTTAAT....... 17 2 11 0.27 3 0 0 0 2 0 0 0 1
...................................................................................................................................................................................................................TTTCTGTCTTTTTATGGAAA.................................................................................................................................. 20 2 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CCAATTAATCATGATGA............................................................................................ 17 2 16 0.13 2 0 0 0 2 0 0 0 0
....................................................................................................................................................................................................................TTCTGTCTTTTTATGGAAA.................................................................................................................................. 19 2 12 0.08 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................AAAAAACTAACATCTA................................................ 16 1 16 0.06 1 0 1 0 0 0 0 0 0
......................................CGGAGCAGCTTGCACTC.................................................................................................................................................................................................................................................................................................................. 17 2 17 0.06 1 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................TCTCTCTTTTTCGGG..................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:12109794-12110154 - dsi_18925 GCACCGCCAAGGAGAAGGCGGTCACCACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGCGCCTC----AGCT------CTT----------------------------------------------------------------A--TATCTTTCAGATT----------------------TTGATTCCTTATTTGCCTAT-----------------------TCTCTTCGATTTGGTT-CAATGTAATGTTGATTTTGTATTCTGTTGGTTT-ATTGTTAGCCTGTCGATT-AGT---------------------------------------------------------------------------------------------TTTAAATAATTTAAAGCTGT-------------------------------------------------------------------------------AGAAACCC-----ACTTT----------------AA-------AAGAGAGAAAAATC-------------------------CCTTTAGCTAA--TCCCCACATTTGTTTGTT----TAATTAGTACAA-------------CTTA----TTATTTGTATTATTTATTTGC--------------------ATCC-TTTTTTTGGTTGT----AGATTAAAGAGGGAACTCTGCTAGATTCCGTACAAAGCGGAGTTACCGATGT
droSec2 scaffold_0:4593037-4593393 - CCACCGCCAAGGAGAAAGCGGTCACCACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGCGTCTC----AGCT------CTTATGT------------------------------------------------------------A--CATCTTTCAGATT----------------------TTGATTCCTTATTTGCCTAT-----------------------TCTCTTCGATTTGTTT-TAATATTATGTTAATTTTGTATTCTTTTGGTTT-ATTATTAGTCTGCCGATT-AGT---------------------------------------------------------------------------------------------TTGAAATAATTTATAGCCTT-------------------------------------------------------------------------------AGAAACCC-----AGCTT----------------AA-CCA------------------------------------------CCTGAAGTTAA--ACCCCATATTTGTTTGTTTGCTTAATTGGTATAC-------------CTCA----TTATTTGTATTATTTATTTGC--------------------ATC--CTTTTTTGGTTGT----AGATTAAAGAGGGAACTCTGCTAGATTCCGTACAAAGCGGAGTTACCGATGT
dm3 chr3L:12409055-12409424 - GCACCGCCAAGGAGAAGGCCGTCACCACCGTCA-ATTTGGCCTCGACAAAGGTGAGTCCTGCGCCTC----AGCT------CGT----------------------------------------------------------------A--TATCTTTCAGATT----------------------TTGATTCCTTATTTGCCTAT-----------------------TCTCTTCGATTTGGTT-CAATATTATGTTGATTTTGTATTCTTTTGGTTT-ATTATTAGTCTGCTGATT-AGT---------------------------------------------------------------------------------------------TTTAAATAATTTAAAGCTGT-------------------------------------------------------------------------------AGAAACCC-----ACCTT----------------AA-CAACAAAAGAGAGCAAAATC-------------------------CCTTTAGTTAA--TCCCCATATTTGTTTGTTAATTTAATTGGTACAC-------------CTTA----TTGTTTGTATTATTTATTTGC--------------------ATC--TTTTTTTGGTTGT----AGATTAAAGAGGGAACTCTGCTAGATTCCGTACAATGCGGAGTTACCGATGT
droEre2 scaffold_4784:12404058-12404507 - ACACCGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGACGCTC----AACT------CAT----------------------------------------------------------------A--TATCTTTCAGATT----------------------TTGATTCTTTACTTACCAAC-----------------------TTTATTTGGTTTTGTT-CGATTTAACGAT-ATTTAGTATTGTTTTGGGTA-ATTGTTAGCCTGCTGAGT-TAT---------------------------------------------------------------------------------------------TAAAAATGTTTTATAGCTGTAGATATGTCTACTTTTATGGAAATAGTTCGCATTGAATATGATAAGCGTATTCAGCTACAGATAGTAGATCGTAAATGTAGAAATGC-----ACCTT----------------GA-AATCAGATGTGAACAGAATC-------------------------TCTGAAGGCAA--ACCGCGTATTTGTTTGTTTATTTAGTTTATTGTT-TAT---------CTTA----TTGTTTGTATTATTTATTTGC--------------------ATC---TTTTTTGGTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTACAAAGCGGAGTTACCGATGT
droYak3 3L:12465102-12465501 - CCACCGCCAAGGAGAAGGCCGTCACTACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGCAGATC----AATT------CAT----------------------------------------------------------------A--TACCTTTCAGATT----------------------TTAAATCTTTATTTGCTAAT-----------------------TTTTTTTGATTTTGTG-CAATTTAATGTTGATATTGTATTGTTTTGGTTT-TCTGTTAACCTGTTGAGTTAGG---------------------------------------------------------------------------------------------T--------TATAAAACCGTAGATAGCTCTA--------------------------------------ATGTAGCTACAGAT---ACATCGTAATTGTATAAACCC-----ACCTT----------------AA-AAGCAAATGAGAACAAAATC-------------------------TCTGAAAATAA--TCCCCGTATTTCTTTGTTTATTTAATATGTACAC-------------CTTA----TTGTTTGTATTATTTATTTGC--------------------ATC---TTTTTTGGTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTACAAAGCGGAGTTACCGATGT
droEug1 scf7180000409466:4502295-4502572 - TGCCT-------------------------------------------------------------------------------------------------------------------------------------------------------TTCATATT----------------------ATTACTCTTAATTTATATAC-----------------------TGATCTAGAATTTGCT-TAAGGTATTA-T-ACTTCATATAAT-TTGAATT-ATAAAGTTTTTG-CAATT-TGT---------------------------------------------------------------------------------------------AATCCATAACTTAAA---------------------------------------------------------------------------------------------------ATT----------------AA-ACTTTAAAGAAATCGAAATC-------------------------TGTGAAAGTTGGCTCCCAATATTGATTTGTTTATTTAATTATCATAC-------------ATTT----TTATTTGTATAATTTGTTTGC--------------------GTA---TTTTTTGGTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTACAAAGCGGAGTTACCGATGT
droBia1 scf7180000302428:4681589-4681729 - GCACCGCCAAGGAGAAGGCCGTCACCACTGTCA-ATTTGGCCTCCACGAAGGTGAGTTCTCTAAATT----ATTAA-------------------------------------------------------------------T-------AGCATTTTGGAAT----------------------TTGATCCTTTATTTGCTTAA-----------------------TTTGTCGGATTTTGTT-CGATTTTACTTTGATTTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415703:276904-277045 + ACACTGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCAACGAAGGTGAGTTGTCTTG-------AACT------CTT----------------------------------------------------------------GTTTGTTTACTAGAAT----------------------TTGATCCTTTATTTGCTGAA-----------------------TTTCTCGGATTTTGTT-CAATTTTATACTTATTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491255:773489-773726 - GCACCGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCAACGAAGGTGAGTCTAATAAATG----TATTATAATTTAT--------------------------------------------------------------------------ATGTAT----------------------TTGATCGTTTGTTTGCTTTA-----------------------ATTCTCCGATTTTGTT-ACATTTTGTTGTAATTTCTT-------------TAAATGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----AGATT--TACTGTCTTAAATTTAAATTTTAC------------------------------------------------------------------------------------------------------------------------------------AGT-TTTTGGCCTTGAT--TTGTTTTTAGTGCTATTTACTTTA-AGA------------AAATTACTTAAAAA----------------
droRho1 scf7180000767448:8974-9143 + AAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCCAT-------------------------------------------------------------------------------AGAA--CC-----GCATT----------------GA-AATCTAAAAAGAACGAAATC-------------------------TTTTG--------------------------CATTTAATTTTTCCGC-------------TTCC----TTATTTGTATGATTTAATTTT------GA-GTT-TGT----TTCTTTGTTTTGGTTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTTCAAAGCGGAGTTACTGATGT
droFic1 scf7180000453839:633433-633889 + ACACCGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCAACGAAGGTAAGTCTTTATAA--AATTGAAC------CGT----------------------------------------------------------------T--TGTCTTCCGGATTTGGTTAATTTTCTTTTGATTTCATTATTGCTGATTTACAAATACGATTTCCATTTTTATTCATTTTGAACTTGAATTA--------------------------------------ATTTATTTTTTG-TAGTA-TTTATTTCTTAGATTTTTGAGACAGTAATTTAAATAAATTGATATTTTAAAATATAATTTTCTTTTAAAGCTATTTTTAATATTTGAGTAACGATGT--------TG----------------------------------------------------------------------------------------AAAAACCTTGTTAACACT----------------GA-AATCAAAATAGAACGA-ATC-------------------------TGTGAAAGCAAATATCCCAAATCGGTTTGTTTATTCAGTTTGTATAT-------------T-TC----TTATTTGTATTATTTATTATC--------------------------GCTTTTGTTTGT----AGATTAAAGAAGGAACCTTGCTAGATTCCGTTCAGAGCGGAGTTACTGATGT
droKik1 scf7180000302272:2729-2839 - TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC----TTAGTTATATGATTTATTTGT------GT-TTC-TGTTTTCTTA-TTTGCTTTGTTTGT----AGATTAAAGACGGAACCTTGCTAGACTCGGTTCAAAGCGGTGTCACTGATGT
droAna3 scaffold_13337:1246728-1247004 + ACACGGCAAAGGAGAAGGCAGTCACCACAGTCA-ATTTGGCCTCAACAAAGGTGGGTTTACTAGAG---TA-----------CTTTGTAGTTGGGGCAC----------------ATATGGTTTGATTTATTTGAAGCAAA---------------TTCATTTT----------------------ATTTTGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAGTCGCATTTGTGTATCTAGA---------------------------TTTGAGATTGCTGTTTACAC-------------CT------TATTTAGTATGATTTATTTTT------GTATTT-TGCTTTATTT--CGTATTTTGTTGT----AGATTAAAGAGGGCTCTTTGCTAGAATCCGTTCAGAGCGGTGTCACTGATGT
droBip1 scf7180000396371:1579488-1579765 + ACACGGCAAAGGAGAAAGCAGTCATCACAGTCA-ATTTGGCCTCTACAAAGGTGGGTTCTATTAA--AGTT-----------TTTGGTAGTTCAAGAAG--------------------GGCTTGATTTATTTTAAGTAAA---------------TTTAT-----------------------------------------------------------------------------------------------------------------------TTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------AGATAAAAAAATCTTTTAGTCTCACTTATGTACTTAGA---------------------------TTCTAGTTTGCTGTTTACAC-------------AT------TATTTGGTATTAGTTATTATT------GC-------TTTTATT--TTGTATTTTGTTGT----AGATTAAAGAAGGCACGTTGCTAGATTCTGTTCAGAGTGGTGTCACAGATGT
dp5 XR_group6:3191528-3191650 - ACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATATCTTTGTTTC----TTT-GTTGTC-------------TTTA----TTATTTGTACGTTTTGTTTTC--------------------TTC--CTCTTTTGGTTGT----AGATGAAAGAAGGCACTTTGCTAGAAACCGTTCAGAGCGGTGTTACAGATGT
droPer2 scaffold_9:1486247-1486290 - GTACCGCCAAGGATAAGGCCGTTACAACTGTCAAATTTGGCATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004540:1295115-1295290 + CCACGGCGAAAGAAAAGGCTGTAACTACTGTCA-ATTTGGCCTCAAACAAGGTACATGCAATCAT--------T-------TGT----------------------------------------------------------------A--GATGATTCATCCT----------------------TTTTTTTTTTTGTTAGTACT-----------------------TTTTTT------------------------------------------------TTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------TCATTAAGATAT----------------------------------------------------------------TGTTTTCCCTTTTCTTTTTGATTTTATTTT----------------------------------------------TCCTATGGTTTGT----AGATTA----------------------------------------------
droVir3 scaffold_13049:9341306-9341468 + dvi_19163 GCACTGCCAAGGAAAAAGCCGTAACTACAGTCA-ATTTGGCTTCGACCAAGGTGTGTTGATATAG--A----------------------------------------------------------------------AAAATCAGCT-----------GGGCT----------------------TTCTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTG--------------TTCTTAT-TTTGTTTTGTATAATTTT-----GTTTGAGT-TTT-CGTTTGCTTT--TCGTTTTGGTTGT----AGATTA----------------------------------------------
droMoj3 scaffold_6680:6013906-6014062 - ACACTGCTAAGGAAAAAGCCGTAACCACAGTGA-ATTTGGCTTCGACCAAGGTTCGTTAAACAAG--------TAA-------------------------------------------------------------------CAGCT-----------G--------------------------TTCTTTGTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTT--------------TTTATTT-ATTTATTTGTTTAATTTT-----GTATGAGT-TTTTGGTTTTGTT--TTATTTTTCGCTGT----AGATTA----------------------------------------------
droGri2 scaffold_15110:5114806-5115176 + ACACTGCCAAAGAGAAAGCCGTTACCACGGTTA-ATTTGGCTTCAACTAAGGTAATACTTTTAAA--AGCT----ATATTTTATTTGTATTACAGTGGTTGCTTGGAAATATAAT----TGCCAGAA--------------------------------AAAAA----------------------TAGTTTTAATATGTGCACAT-----------------------ACTTTTTGATTGCGTTTATTTTCACTTGTAGA-TTTA-------------TATATATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----AGAAGTATATAAACTTAAATTTA-TGTCTTATGTACACGTATTT----------------C--------TTTTAA-------AACCTGCTCTTGCTTATT--------------------------GATATTATTTTTTATATGTTTCATTTT-----GTATGCGT-TTT-TATTTGCTTTTTTCGTTTACGTTGT----AGATTAAAGATGGAACTCTGCTAGAATCCGTTCAGAGTGGTGTTACAGAAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCACCGCCAAGGAGAAGGCGGTCACCACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGCGCCTC----AGCT------CTT----------------------------------------------------------------A--TATCTTTCAGATT----------------------TTGATTCCTTATTTGCCTAT-----------------------TCTCTTCGATTTGGTT-CAATGTAATGTTGATTTTGTATTCTGTTGGTTT-ATTGTTAGCCTGTCGATT-AGT---------------------------------------------------------------------------------------------TTTAAATAATTTAAAGCTGT-------------------------------------------------------------------------------AGAAACCC-----ACTTT----------------AA-------AAGAGAGAAAAATC-------------------------CCTTTAGCTAA--TCCCCACATTTGTTTGTT----TAATTAGTACAA-------------CTTA----TTATTTGTATTATTTATTTGC--------------------ATCC-TTTTTTTGGTTGT----AGATTAAAGAGGGAACTCTGCTAGATTCCGTACAAAGCGGAGTTACCGATGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................TT-ATTGTTAGCCTGTCGATT-AGT---------------------------------------------------------------------------------------------TTTA........................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTAGATTCCGTACAAAGCGGAG..........2511.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAACTCTGCTAGATTCC.......................2111.00101000000000000000
droSec2
CCACCGCCAAGGAGAAAGCGGTCACCACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGCGTCTC----AGCT------CTTATGT------------------------------------------------------------A--CATCTTTCAGATT----------------------TTGATTCCTTATTTGCCTAT-----------------------TCTCTTCGATTTGTTT-TAATATTATGTTAATTTTGTATTCTTTTGGTTT-ATTATTAGTCTGCCGATT-AGT---------------------------------------------------------------------------------------------TTGAAATAATTTATAGCCTT-------------------------------------------------------------------------------AGAAACCC-----AGCTT----------------AA-CCA------------------------------------------CCTGAAGTTAA--ACCCCATATTTGTTTGTTTGCTTAATTGGTATAC-------------CTCA----TTATTTGTATTATTTATTTGC--------------------ATC--CTTTTTTGGTTGT----AGATTAAAGAGGGAACTCTGCTAGATTCCGTACAAAGCGGAGTTACCGATGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATTCCGTACAAAGCGGA...........2112.0020020
..................................................................................................................................................................................................................................................................................................................................................................................................................AATTTATAGCCTT-------------------------------------------------------------------------------AGAAACCC-----AGCTT----------------.......................................................................................................................................................................................................................................2611.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGAGGGAACTCTGCTAGATTCCGT.....................2811.0010010
dm3
GCACCGCCAAGGAGAAGGCCGTCACCACCGTCA-ATTTGGCCTCGACAAAGGTGAGTCCTGCGCCTC----AGCT------CGT----------------------------------------------------------------A--TATCTTTCAGATT----------------------TTGATTCCTTATTTGCCTAT-----------------------TCTCTTCGATTTGGTT-CAATATTATGTTGATTTTGTATTCTTTTGGTTT-ATTATTAGTCTGCTGATT-AGT---------------------------------------------------------------------------------------------TTTAAATAATTTAAAGCTGT-------------------------------------------------------------------------------AGAAACCC-----ACCTT----------------AA-CAACAAAAGAGAGCAAAATC-------------------------CCTTTAGTTAA--TCCCCATATTTGTTTGTTAATTTAATTGGTACAC-------------CTTA----TTGTTTGTATTATTTATTTGC--------------------ATC--TTTTTTTGGTTGT----AGATTAAAGAGGGAACTCTGCTAGATTCCGTACAATGCGGAGTTACCGATGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGGGAACTCTGCTAGATTCCGT.....................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGAGAAGGCCGTCACCACCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
......................CACCACCGTCA-ATTTGGCCTCGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATAATTTAAAGCTGT-------------------------------------------------------------------------------AG.......................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CACCGCCAAGGAGAAGGCCGTCACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACCGCCAAGGAGAAGGCCGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAGGGAACTCTGCTAGATTCC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCTAGATTCCGTACA..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTAGATTCCGTACAATGC..............2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGCGGAGTTACCGATGT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------ATC--TTTTTTTGGTTGT----AG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCACCGTCA-ATTTGGCCTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCACCGTCA-ATTTGGCCTCGACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAGGAGAAGGCCGTCACCACCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTAAAGCTGT-------------------------------------------------------------------------------AGAAACCC-----AC..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAATGCGGAGTTACCGAT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................TCA-ATTTGGCCTCGACAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTAGATTCCGTACAATGCGGAGT.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGATTCCGTACAATG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTAGATTCCGTACAATGCG.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCC-----ACCTT----------------AA-CAACAAAAGAGAGCAAA...................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAGAGAGCAAAATC-------------------------C......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGTCACCACCGTCA-ATTTGGCCTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATC-------------------------CCTTTAGTTAA--TCCCCATATTTG..............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCTAGATTCCGTACAATGCGGA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTAGATTCCGTACAATGCGGA...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAATTGGTACAC-------------CTTA----TTGTTTGT...........................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTAGATTCCGTACAATGCGGAGT.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTAA--TCCCCATATTTGTTTGT.........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GTCA-ATTTGGCCTCGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGAACTCTGCTAGAT..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCACCGCCAAGGAGAAGGCCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGCTAGATTCCGTACAATGCGGAG..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACCGCCAAGGAGAAGGCCGTCACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAATGCGGAGTTACCGATGT2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.CACCGCCAAGGAGAAGGCCGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGGGAACTCTGCTAGATT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACACCGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGACGCTC----AACT------CAT----------------------------------------------------------------A--TATCTTTCAGATT----------------------TTGATTCTTTACTTACCAAC-----------------------TTTATTTGGTTTTGTT-CGATTTAACGAT-ATTTAGTATTGTTTTGGGTA-ATTGTTAGCCTGCTGAGT-TAT---------------------------------------------------------------------------------------------TAAAAATGTTTTATAGCTGTAGATATGTCTACTTTTATGGAAATAGTTCGCATTGAATATGATAAGCGTATTCAGCTACAGATAGTAGATCGTAAATGTAGAAATGC-----ACCTT----------------GA-AATCAGATGTGAACAGAATC-------------------------TCTGAAGGCAA--ACCGCGTATTTGTTTGTTTATTTAGTTTATTGTT-TAT---------CTTA----TTGTTTGTATTATTTATTTGC--------------------ATC---TTTTTTGGTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTACAAAGCGGAGTTACCGATGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAGATTCCGTACAAAGCGGA...........2511.0010001000
...................CGTCACCACAGTCA-ATTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATTCCGTACAAAGCGGA...........2111.0010001000
......................CACCACAGTCA-ATTTGGCCTCGACGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------------------------TCTGAAGGCAA--ACCGCGT...................................................................................................................................................................2111.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATC-------------------------TCTGAAGGCAA--ACCGCGTATT................................................................................................................................................................2611.0010000100
droYak3
CCACCGCCAAGGAGAAGGCCGTCACTACAGTCA-ATTTGGCCTCGACGAAGGTGAGTCCTGCAGATC----AATT------CAT----------------------------------------------------------------A--TACCTTTCAGATT----------------------TTAAATCTTTATTTGCTAAT-----------------------TTTTTTTGATTTTGTG-CAATTTAATGTTGATATTGTATTGTTTTGGTTT-TCTGTTAACCTGTTGAGTTAGG---------------------------------------------------------------------------------------------T--------TATAAAACCGTAGATAGCTCTA--------------------------------------ATGTAGCTACAGAT---ACATCGTAATTGTATAAACCC-----ACCTT----------------AA-AAGCAAATGAGAACAAAATC-------------------------TCTGAAAATAA--TCCCCGTATTTCTTTGTTTATTTAATATGTACAC-------------CTTA----TTGTTTGTATTATTTATTTGC--------------------ATC---TTTTTTGGTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTACAAAGCGGAGTTACCGATGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAGATTCCGTACAAAGC..............2211.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAAGCGGAGTTACCGA...2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAACTTTGCTAGATTC........................2011.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGCGGAGTTACCGATGT2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTAGATTCCGTACAAAGCGGAGT.........2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGAAGGAACTTTGCTAGATTCCGT.....................2811.00100000010000
droEug1
TGCCT-------------------------------------------------------------------------------------------------------------------------------------------------------TTCATATT----------------------ATTACTCTTAATTTATATAC-----------------------TGATCTAGAATTTGCT-TAAGGTATTA-T-ACTTCATATAAT-TTGAATT-ATAAAGTTTTTG-CAATT-TGT---------------------------------------------------------------------------------------------AATCCATAACTTAAA---------------------------------------------------------------------------------------------------ATT----------------AA-ACTTTAAAGAAATCGAAATC-------------------------TGTGAAAGTTGGCTCCCAATATTGATTTGTTTATTTAATTATCATAC-------------ATTT----TTATTTGTATAATTTGTTTGC--------------------GTA---TTTTTTGGTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTACAAAGCGGAGTTACCGATGTSizeHit CountTotal NormTotal
No Reads
droBia1
GCACCGCCAAGGAGAAGGCCGTCACCACTGTCA-ATTTGGCCTCCACGAAGGTGAGTTCTCTAAATT----ATTAA-------------------------------------------------------------------T-------AGCATTTTGGAAT----------------------TTGATCCTTTATTTGCTTAA-----------------------TTTGTCGGATTTTGTT-CGATTTTACTTTGATTTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACACTGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCAACGAAGGTGAGTTGTCTTG-------AACT------CTT----------------------------------------------------------------GTTTGTTTACTAGAAT----------------------TTGATCCTTTATTTGCTGAA-----------------------TTTCTCGGATTTTGTT-CAATTTTATACTTATTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCACCGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCAACGAAGGTGAGTCTAATAAATG----TATTATAATTTAT--------------------------------------------------------------------------ATGTAT----------------------TTGATCGTTTGTTTGCTTTA-----------------------ATTCTCCGATTTTGTT-ACATTTTGTTGTAATTTCTT-------------TAAATGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----AGATT--TACTGTCTTAAATTTAAATTTTAC------------------------------------------------------------------------------------------------------------------------------------AGT-TTTTGGCCTTGAT--TTGTTTTTAGTGCTATTTACTTTA-AGA------------AAATTACTTAAAAA----------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCCAT-------------------------------------------------------------------------------AGAA--CC-----GCATT----------------GA-AATCTAAAAAGAACGAAATC-------------------------TTTTG--------------------------CATTTAATTTTTCCGC-------------TTCC----TTATTTGTATGATTTAATTTT------GA-GTT-TGT----TTCTTTGTTTTGGTTTGT----AGATTAAAGAAGGAACTTTGCTAGATTCCGTTCAAAGCGGAGTTACTGATGTSizeHit CountTotal NormTotal
No Reads
droFic1
ACACCGCCAAGGAGAAGGCCGTCACCACAGTCA-ATTTGGCCTCAACGAAGGTAAGTCTTTATAA--AATTGAAC------CGT----------------------------------------------------------------T--TGTCTTCCGGATTTGGTTAATTTTCTTTTGATTTCATTATTGCTGATTTACAAATACGATTTCCATTTTTATTCATTTTGAACTTGAATTA--------------------------------------ATTTATTTTTTG-TAGTA-TTTATTTCTTAGATTTTTGAGACAGTAATTTAAATAAATTGATATTTTAAAATATAATTTTCTTTTAAAGCTATTTTTAATATTTGAGTAACGATGT--------TG----------------------------------------------------------------------------------------AAAAACCTTGTTAACACT----------------GA-AATCAAAATAGAACGA-ATC-------------------------TGTGAAAGCAAATATCCCAAATCGGTTTGTTTATTCAGTTTGTATAT-------------T-TC----TTATTTGTATTATTTATTATC--------------------------GCTTTTGTTTGT----AGATTAAAGAAGGAACCTTGCTAGATTCCGTTCAGAGCGGAGTTACTGATGTSizeHit CountTotal NormTotal
No Reads
droKik1
TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC----TTAGTTATATGATTTATTTGT------GT-TTC-TGTTTTCTTA-TTTGCTTTGTTTGT----AGATTAAAGACGGAACCTTGCTAGACTCGGTTCAAAGCGGTGTCACTGATGTSizeHit CountTotal NormTotal
No Reads
droAna3
ACACGGCAAAGGAGAAGGCAGTCACCACAGTCA-ATTTGGCCTCAACAAAGGTGGGTTTACTAGAG---TA-----------CTTTGTAGTTGGGGCAC----------------ATATGGTTTGATTTATTTGAAGCAAA---------------TTCATTTT----------------------ATTTTGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAGTCGCATTTGTGTATCTAGA---------------------------TTTGAGATTGCTGTTTACAC-------------CT------TATTTAGTATGATTTATTTTT------GTATTT-TGCTTTATTT--CGTATTTTGTTGT----AGATTAAAGAGGGCTCTTTGCTAGAATCCGTTCAGAGCGGTGTCACTGATGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.CACGGCAAAGGAGAAGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........GAGAAGGCAGTCACCACAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGT----AGATTAAAGAGG........................................1911.001000010
droBip1
ACACGGCAAAGGAGAAAGCAGTCATCACAGTCA-ATTTGGCCTCTACAAAGGTGGGTTCTATTAA--AGTT-----------TTTGGTAGTTCAAGAAG--------------------GGCTTGATTTATTTTAAGTAAA---------------TTTAT-----------------------------------------------------------------------------------------------------------------------TTATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------AGATAAAAAAATCTTTTAGTCTCACTTATGTACTTAGA---------------------------TTCTAGTTTGCTGTTTACAC-------------AT------TATTTGGTATTAGTTATTATT------GC-------TTTTATT--TTGTATTTTGTTGT----AGATTAAAGAAGGCACGTTGCTAGATTCTGTTCAGAGTGGTGTCACAGATGTSizeHit CountTotal NormTotal
No Reads
dp5
ACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATATCTTTGTTTC----TTT-GTTGTC-------------TTTA----TTATTTGTACGTTTTGTTTTC--------------------TTC--CTCTTTTGGTTGT----AGATGAAAGAAGGCACTTTGCTAGAAACCGTTCAGAGCGGTGTTACAGATGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGAAACCGTTCAGAGC..............2012.0020100000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTTGCTAGAAACCGTTCAGAGC..............2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGAAACCGTTCAGAGC..............1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCTAGAAACCGTTCAGAGCGGT...........2711.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAGGCACTTTGCTAGA...........................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTTGCTAGAAACCGTTCAGAGCGGC...........2811.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCACTTTGCTAGAAACCGTTCAGAGC..............2811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC--CTCTTTTGGTTGT----AGT.................................................1920.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC----TTT-GTTGTC-------------TTTA----AA.................................................................................................................19200.0510000010000
droPer2
GTACCGCCAAGGATAAGGCCGTTACAACTGTCAAATTTGGCATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....CGCCAAGGATAAGGCCGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
CCACGGCGAAAGAAAAGGCTGTAACTACTGTCA-ATTTGGCCTCAAACAAGGTACATGCAATCAT--------T-------TGT----------------------------------------------------------------A--GATGATTCATCCT----------------------TTTTTTTTTTTGTTAGTACT-----------------------TTTTTT------------------------------------------------TTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------TCATTAAGATAT----------------------------------------------------------------TGTTTTCCCTTTTCTTTTTGATTTTATTTT----------------------------------------------TCCTATGGTTTGT----AGATTA----------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------TCATTAAGATAT----------------------------------------------------------------TGTTTTCCCTTTTC...................................................................................................................................2711.00100010
....GGCGAAAGAAAAGGCTGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.........AAGAAAAGGCTGTAACTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
droVir3
GCACTGCCAAGGAAAAAGCCGTAACTACAGTCA-ATTTGGCTTCGACCAAGGTGTGTTGATATAG--A----------------------------------------------------------------------AAAATCAGCT-----------GGGCT----------------------TTCTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTG--------------TTCTTAT-TTTGTTTTGTATAATTTT-----GTTTGAGT-TTT-CGTTTGCTTT--TCGTTTTGGTTGT----AGATTA----------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................GTGTGTTGATATAG--A----------------------------------------------------------------------AAAATCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-CGTTTGCTTT--TCGTTTTGGTT..........................................................2311.001000000000000000000000000000000000000000000000000000000000000001
...................................................GTGTGTTGATATAG--A----------------------------------------------------------------------AAAATCAGCT-----------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
..................................ATTTGGCTTCGACCAAGGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................T----------------------TTCTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTG--------------TT...........................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................TCTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTG--------------TTCTTAT-TT...................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.....GCCAAGGAAAAAGCCGTAACTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................T----------------------TTCTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTG--------------TTC..........................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................CT----------------------TTCTTTGTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTG--------------TT...........................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
.......CAAGGAAAAAGCCGTAACTACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
ACACTGCTAAGGAAAAAGCCGTAACCACAGTGA-ATTTGGCTTCGACCAAGGTTCGTTAAACAAG--------TAA-------------------------------------------------------------------CAGCT-----------G--------------------------TTCTTTGTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCTT--------------TTTATTT-ATTTATTTGTTTAATTTT-----GTATGAGT-TTTTGGTTTTGTT--TTATTTTTCGCTGT----AGATTA----------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............AAAAAGCCGTAACCACAGTGA-ATTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
ACACTGCCAAAGAGAAAGCCGTTACCACGGTTA-ATTTGGCTTCAACTAAGGTAATACTTTTAAA--AGCT----ATATTTTATTTGTATTACAGTGGTTGCTTGGAAATATAAT----TGCCAGAA--------------------------------AAAAA----------------------TAGTTTTAATATGTGCACAT-----------------------ACTTTTTGATTGCGTTTATTTTCACTTGTAGA-TTTA-------------TATATATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----AGAAGTATATAAACTTAAATTTA-TGTCTTATGTACACGTATTT----------------C--------TTTTAA-------AACCTGCTCTTGCTTATT--------------------------GATATTATTTTTTATATGTTTCATTTT-----GTATGCGT-TTT-TATTTGCTTTTTTCGTTTACGTTGT----AGATTAAAGATGGAACTCTGCTAGAATCCGTTCAGAGTGGTGTTACAGAAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:19 PM