ID:

dsi_18906

Coordinate:

2l:8404584-8404733 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_8404145_8404583_-]; CDS [2l_8404145_8404583_-]; intron [2l_8404584_8405364_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTATTTCAACAGTTTATACTATATTACTCACTTTTTAGTATATATATATATTAAAGTTTAAGGCCGCCCTCGTAACGTTTAAGACTTAATGGGTCAGGAATATATGTACGTTATTGTAGTAGATATATATTTCATACAACTTACGACAAACTTTAGCTGTTCGTCTTATAAATAACTCTGTTACCTGCTTTTCCTTGCAGAATCGGAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCG
**************************************************((.(((...(((((.......((((((((((((((.....(((.(((.......(((.(((..(((((..((((....))))..)))))...))))))........)))))))))))).....)))...)))))..)))))..)))..))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
M024
male body
SRR553487
NRT_0-2 hours eggs
SRR618934
dsim w501 ovaries
GSM343915
embryo
M023
head
..................................................................................................................................................................................................................CCACATAATGGACACGGATGA................... 21 3 7 23.14 162 162 0 0 0 0 0
................................................................................................................................................................................................................AACCACATAATGGACACGGAT..................... 21 3 5 1.80 9 9 0 0 0 0 0
...............................................................................................................................................................................................................GAACCACATAATGGACACGGA...................... 21 3 5 1.60 8 8 0 0 0 0 0
.................................................................................................................................................................................................................ACCACATAATGGACACGGATG.................... 21 3 4 1.25 5 5 0 0 0 0 0
...........................................................................................................................................................................................................CGGAGAGCCACATAATGCATGCGGA...................... 25 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................CCACATAATGGACACGGATG.................... 20 2 3 1.00 3 3 0 0 0 0 0
............................................................................................................................................................................................................................CACGCGGATGCCCTGGCCT........... 19 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................ACCACATAATGGACACGGAT..................... 20 3 10 0.70 7 7 0 0 0 0 0
...................................................................................................................................................................................................................CACATAATGGACACGGATGA................... 20 3 10 0.50 5 5 0 0 0 0 0
...........................TCACGTTTTAGGTTATATATATA........................................................................................................................................................................................................ 23 3 2 0.50 1 0 0 1 0 0 0
...................................................................................................................................................................................................................CACATAATGGACACGGATGAC.................. 21 3 6 0.33 2 2 0 0 0 0 0
.........................................................................................................................................................TAGCTGTTCGACTTACAAAAAA........................................................................... 22 3 3 0.33 1 0 0 0 1 0 0
...................................................................................................................................................................................................................CACATAATGGACACGGATG.................... 19 2 4 0.25 1 1 0 0 0 0 0
..................................................................................................................................................................................................................CCACATAATGGACACGGAT..................... 19 2 6 0.17 1 1 0 0 0 0 0
...............................................................................................................................................................................................................GAACCACATAATGGACACGG....................... 20 3 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................TCTGTTCGACTTTTAAATAAC.......................................................................... 21 3 9 0.11 1 0 1 0 0 0 0
....................................................................................................................................................AACTTTAACTGTTCGTCGTC.................................................................................. 20 3 12 0.08 1 0 0 0 0 1 0
.............................................................................................................................................................................AACTCTGCTACCTGCGT............................................................ 17 2 17 0.06 1 0 0 0 1 0 0
...............................................................................................................................................CGACGATCTTTAGCTGGTC........................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

CATAAAGTTGTCAAATATGATATAATGAGTGAAAAATCATATATATATATAATTTCAAATTCCGGCGGGAGCATTGCAAATTCTGAATTACCCAGTCCTTATATACATGCAATAACATCATCTATATATAAAGTATGTTGAATGCTGTTTGAAATCGACAAGCAGAATATTTATTGAGACAATGGACGAAAAGGAACGTCTTAGCCTCTCGGTGTATTACGTGCGCCTACGGGACCGGAGACGGATAGGC
**************************************************((.(((...(((((.......((((((((((((((.....(((.(((.......(((.(((..(((((..((((....))))..)))))...))))))........)))))))))))).....)))...)))))..)))))..)))..))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
O001
Testis
SRR553488
RT_0-2 hours eggs
SRR553485
Chicharo_3 day-old ovaries
GSM343915
embryo
SRR902008
ovaries
..........................................................................................................................................................................................CGAAAAGGAACGTCTCGACCTCTC........................................ 24 3 2 1.00 2 0 0 1 1 0 0
......................................................................................................................................................................................................TCTTAGCCTCTCGGTGTA.................................. 18 0 2 1.00 2 0 2 0 0 0 0
..................................................................................................................................................................................................................GGTGTATTACCTGTGCCTAC.................... 20 2 3 0.67 2 2 0 0 0 0 0
..............................................................................................................................................................................................................TCTTGGTGTATTACCTGTGCCT...................... 22 3 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................................................................TTGGTGTATTACCTGTGCCTAC.................... 22 3 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TGCAATATCACCATCAATATA.......................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0
..................................................................................................................................................................................................................GGTGTATTACCTGTGCCTACT................... 21 3 7 0.14 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TGGTGTATTACCTGTGCCTA..................... 20 3 10 0.10 1 1 0 0 0 0 0
........................ATGATTGAAAAATCTTAT................................................................................................................................................................................................................ 18 2 15 0.07 1 0 0 1 0 0 0
................................................AAAAGTTCTAATTCCGGCGGG..................................................................................................................................................................................... 21 3 17 0.06 1 0 0 0 0 0 1
.ATAAAGTTGTCAAAGA......................................................................................................................................................................................................................................... 16 1 19 0.05 1 0 0 0 1 0 0
........................ATGAGTGAAAAGTCA................................................................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0
...............................AAAAATCACATATATAT.......................................................................................................................................................................................................... 17 1 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:8404534-8404783 - dsi_18906 GTATTTCAACAGTTTATA------CTATA----------TTACTCACT--------------T-TTTAGTATATATATATATTAAAGTTTAAGGCCGCCCTCGTAACGTTTAAGAC---------------------TT--AATGGGTCAGGAATATATGT--------------ACGTTATTGTAGT---------------------------------------------------AGATA-TATATTTCATACAACTTAC--------------------------------------------------------------------------------------------------------------------GACA--------AAC-TTTAGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTCTTAT-----------AAATAAC-TC---TG-TTAC-----------CTG---CTTTTCCTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCG
droSec2 scaffold_3:4171578-4171825 - GTATTTCAACAGCTTATA------CTATA----------TTACTCACT--------------T-TTTAGTATAT--ATATATTAAAGTTTAAGTCCGCCCTCGTAACATTTAAGAC---------------------TT--AATGGGTCAGGAATATATGT--------------ACGTTATTCTGGT---------------------------------------------------GGATA-TTTTTTTCATACCACTTAC--------------------------------------------------------------------------------------------------------------------GACA--------AAC-TTTAGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCGTAT-----------AAATAAC-TC---TA-ATAC-----------CTG---ATTTTCGTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCG
dm3 chr2L:8690203-8690422 - GTATTTCAACAGTTTAT-----------A----------TTGCTCACT--------------TATTTACTGTAC--ATATATTAAAGTTTAAGGCCGCCCTCGTAACATTTAAGACT---------------------------GTGTCAGGAATATATGT--------------ACGTTTTTCTAAT---------------------------------------------------GAAGA-TTTTGTTCATACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCTTAT-----------GAATAAC-AC---TT-TTAC-----------CTG---CTTTTCGTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCG
droEre2 scaffold_4929:9281674-9281824 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTTTAGTTAT---------------------------------------------------GGA-A-TGTTTTTTATACTGCTTCTGA-----------TTT-------------------------------------------------------------------------------------------------------ACAGCTT--AAC-TTTAATTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATAGTAC-----------TGATTAG-AA---TG-TAAC-----------CCG---TTTTTTGTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGGCTATCCG
droYak3 2L:11338536-11338712 - ATTTCCAA--CGTATATA------CTATA----------CTGC------------------------AAT------ATGT-----------------------------------------------------------------------------------------------------------------------------------------------------ATTTAGCTATAAA-ATCTTTCTTCATACAGCTTTTGA--------------------------------------------------------------------------------------------------------------------TAAATCAT--AAA-TCATTTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATCTTAC-----------TGATTAC-AA---TT-TTACTC-----------C---T-TTTTTTTGCAGAATCG---GAGAGCCACCTAATGCACGCGGATGCCCTGGCCTCTGGCTACCCG
droEug1 scf7180000409554:824606-824850 + GTATTTTAAAAATTT-------------------TTC--TT----------------------------------------------TTTAAGTCTTCGGTCT----------------------------------------------------------------------------------------------------------------------------------------TGA-G-AGATTTT-------------------------------------------------------------------------------------------------------------TC--------------------------------------------AAGGCACCAAAATAAACTAAACAATTAATATTTAAAAACA----------------------------------------------------------------------AT-------------TTAAAAAGATTAATAAAACT---------------------------GTAG------------------------TATTATAATTTATAAATAAGTACATATATGTTTCACTGATTCTTGTAT-----------TAATTTCGAA---TT-T--CTC---------CTT--TA-TTTTCTTGCAGAATCG---GAAAGCCATATAATGCACGCGGATGCCCTGGCCGCTGGTTATCCG
droBia1 scf7180000301518:1086815-1087102 + GCACGTTCGATATCA-------------------CTCTACTTA------------------------AAC------ATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAGA--CTAGTGATCTGTTTTTGAATTCATG-----------------------------TTGC-----------TT--------------------------------------------AATGCTCTTGGTTAAACCACTGCAGCGGTCATCAAACAAA----------------------------------------------------------------------TC-------------TCTAA-----------AACTTTATTTACCTTATAAAAAATGTTGTCAGAAGCAATGATGTTTTTTCTTTAAGTAGTA----------GTAGGGAA-TCCTCTTAGGTCCTCTGATCCCCCTAT-----------TGACCTC-GC---TT-A--C-----------C-----T-CGCGCTTTCAGAGTCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCGCTGGCTACCCG
droTak1 scf7180000410803:61048-61268 - TTTTAGAATTTTTATGAATGTT-------------GC-------------------------------------------------GTTTAATAC-----------------------------------------------------------------------------------------CGGTGGCTTTTTTGACATTAATTTTAAAATGAAAAAAATGTTTACATTTAGCAAGACT-ATCTTTATACATATA-------------------------------------------------------------------------------------------------GA----------------AACCTAAGAAT--------ACA-TTCAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGCCCAA-----------TAACTAA-AA---TT-TTTCC----------TCA---C-TTTTCTTGCAGAATCG---GAAAGCCACATAATGCACGCGGATGCCCTGGCTGCAGGTTATCCG
droEle1 scf7180000491186:1523371-1523617 - ATATCTCAGCAGTCA-------------------ACC--TTTTTTATA--------------G------ATTATTGATAGATTATTGTTAAA----------------------------------------------------AGGTAAGGAAAGAAA--AAAGTGTGAGTTAA-------AGTGGT-----TGTCGGTAA--------------------------------ATAGGACT-ATGTATAT-------------------------------------------------------TA---------------------------------------------------GGTTACTATTTTAAAATTTA-GAAA--------AAT-GTTTGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCGTAC-----------GAACTTC-CA---CTTA--CTCCGTTAT---TTT-T-TTTTTTTTGTCAGAATCG---GAGAGCCATATAATGCACGCGGATGCCCTGGCCTCTGGCTATCCG
droRho1 scf7180000779312:157559-157824 + ATATTTCATTTATTTAAAGGCTACGTTA--------T--TTTCATTAG--------------A------TTAAGA---------AAAATAAA---G---------------------------------------------------------------------GGTTAATTAC-------AGT--TAACTTTTTCGGTAA--------------------------------TT---------------------------------------------------------AGACGAAGACTATCAAACGTTTAATTTAATTTAAAGTTTAAAGTTTTAAAATGTACCAGAGAG---------TCTCTAAGTCTAT--GAGA--------AAGTTTTAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTCGTAC-----------TAACTGC-CA---TT-TATCT----------CCG---C-TTTTCTTGCAGAATCG---GAGAGCCATATAATGCATGCGGATGCCCTGGCCTCTGGGTATCCT
droFic1 scf7180000454102:351826-351990 + TTACGTTAAACAATA-------------------TACT-----------------------------AAT------GTAT---------------------------------------------------------------------------------------------------------------------------------------------------------AGCCAGAAA-AG-------------------GATATAAACTAGA-----------------------------------------------------------------------T---------------------------------TAAATTAAAAACT-GTTACCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCTCGTTT-----------TAACTTC-TC---TT-TTTT-----------CTACCTC-CTCTGTTGCAGAATCG---GAAAGCCATATAATGCATGCGGATGCCCTGGCCGCTGGCTATCCG
droKik1 scf7180000302412:834791-835109 - ATATTTATATATAT--------ATTTAA--------G--AGCCTTACTCTATGATGTTTATATGTATAGTGTAA--A-----------------------------------TAATAGCACGAGAACTCAGTGATTCTTAAGATGAATCAAGATTACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTTTCAAACTTTATATTAATTGTTATATTTTGTATACTTTAACTATCTTTGGTTTCTGTAAAACTCTTTTAATAACATTACAATTTAAATAGTGCAATTAAAAAGATTA----------------------AAATATATTTTCAAATATAA----------------------------------------------------------------CT--------------AAA----------------CTCCTTTATATTTTG---TTTCTCCCTTTAGAGTCT---GAAAGCCATATAATGCACGCCGATGCTTTGGCCGCCGGTTATCCG
droAna3 scaffold_12916:10336729-10336928 - ATTTTTGAAGATTCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGGGTTTGA-----------TTTTATATCTAGAAGTAAACGAATTGTTTTTAAATTTTAA-----------------------------TTCCAAAGAGAATACTTACTATCTAATTATTTA--AAA--------AAATT--------------CAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAA-----------TAACCTT-------T-TATTTT--------TCAA---AATTCTGTTTTAGAATCG---GAAAGTCATATAATGCATGCCGATGCCCTGGCGGCTGGATATCCG
droBip1 scf7180000396572:9629-9791 - ACAAGTTTA-------T-----------AAGACTTTA--AATTTTATA--------------G------T-------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAAAATTA-----------------------------------------------------------------------TTAAAAAGA------------------------------------AT-CGTAGCTAATT----AAC------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA--------------------AGTCCCTAAG-----------TAACTGA-------A-TAAT-----------TTT---GTTATTTTTTTAGAATCG---GAAAGTCATATAATGCACGCCGATGCCCTGGCCTCCGGCTATCCG
dp5 4_group5:973334-973556 + GGATCCGAATGGCT--------TTCCAA--------C--TGTCGTACA--------------A------TTCAGTG--------AAAATCAT---G----------GATGTAAAACTGTATGAAAACTCAAGAT---AT--AATGGCTCTCGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACAGT----------------------------------------------------------------------------T------------------------------------------------------------------------------TATTTGAATTGATGAATGA--------ATGCTCCAC--------GTT-CTTGTTTATTA-------TTAACGTT-CGACTC--------TCTT---GCTCTTTTTACAGAATCG---GAAAGCCATATAATGCACGCCGATGCCCTGACCTCTGGCTATCCG
droPer2 scaffold_5:5378650-5378872 + GGATCCGAATGGCT--------TTCCAA--------C--TGTCGTACA--------------A------TTCAGTG--------AAAATCAT---G----------GATGTAAAACTGTTTGAAAACTCAAGAT---AT--AATGGCTCTCAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAGAGT----------------------------------------------------------------------------T------------------------------------------------------------------------------TATTTGAATTGATGAATGA--------ATGCTCCAC--------GTT-CTTGTTTATTA-------TTAACTTT-CGACTC--------TCTT---GCTCTTTTTACAGAATCG---GAAAGCCATATAATGCACGCCGATGCCCTGAACTCTGGCTATCCG
droWil2 scf2_1100000004884:1127427-1127507 - ACTCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCTC--------TCTCTCTC-TTTATTTGCAGAATCT---GAAAGCCATATAATGCATTCGGATGCTTTGTCTGTGGGTCATCCG
droVir3 scaffold_12723:4663009-4663107 - TGTGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-----------TAATTAT-AA---TT-TTACCT--------GCATTC-T-CTCCTGTACAGAATCGGCGGAAAGTCAACTAATGCATGCGGAGGCGCTGCCGGTGGGTCATCCC
droMoj3 scaffold_6500:10627943-10628018 - TTATCTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------C-----T-CTCGCACACAGAATCGGCCGAAAGTCAAATAATGCATGCAGAGGCTCTGCCCGTTGGACATCCT
droGri2 scaffold_15126:3613654-3613709 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAATCCGCTGAAAGTCCAATAATGCAGGCAGAGGCGTTGCCGGTGGGTCACCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTATTTCAACAGTTTATA------CTATA----------TTACTCACT--------------T-TTTAGTATATATATATATTAAAGTTTAAGGCCGCCCTCGTAACGTTTAAGAC---------------------TT--AATGGGTCAGGAATATATGT--------------ACGTTATTGTAGT---------------------------------------------------AGATA-TATATTTCATACAACTTAC--------------------------------------------------------------------------------------------------------------------GACA--------AAC-TTTAGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTCTTAT-----------AAATAAC-TC---TG-TTAC-----------CTG---CTTTTCCTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCGGATGCCCTGGCCT...........1911.00101000000000000000
droSec2
GTATTTCAACAGCTTATA------CTATA----------TTACTCACT--------------T-TTTAGTATAT--ATATATTAAAGTTTAAGTCCGCCCTCGTAACATTTAAGAC---------------------TT--AATGGGTCAGGAATATATGT--------------ACGTTATTCTGGT---------------------------------------------------GGATA-TTTTTTTCATACCACTTAC--------------------------------------------------------------------------------------------------------------------GACA--------AAC-TTTAGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCATCGTAT-----------AAATAAC-TC---TA-ATAC-----------CTG---ATTTTCGTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
dm3
GTATTTCAACAGTTTAT-----------A----------TTGCTCACT--------------TATTTACTGTAC--ATATATTAAAGTTTAAGGCCGCCCTCGTAACATTTAAGACT---------------------------GTGTCAGGAATATATGT--------------ACGTTTTTCTAAT---------------------------------------------------GAAGA-TTTTGTTCATACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCTTAT-----------GAATAAC-AC---TT-TTAC-----------CTG---CTTTTCGTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGCCTATCCGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAT-----------GAATAAC-AC---TT-TTA....................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTTAAGACT---------------------------GTGTCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAACATTTAAGACT---------------------------GTGTCAGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCGTAACATTTAAGACT---------------------------GTGTCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCCACATAATGCACGCG........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG---GAGAGCCACATAATGCACGCGGA......................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCGTAACATTTAAGACT---------------------------GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGATGCCCTGGCCTCT.........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAACATTTAAGACT---------------------------GTGTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GCCCTCGTAACATTTAAGACT---------------------------GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCACGCGGATGCCCTGGCCTCT.........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCG---GAGAGCCACATAATGC.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAAGACT---------------------------GTGTCAGGAATATATGT--------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCCTGGCCTCTGCCT.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAAGACT---------------------------GTGTCAGGAATAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCACGCGGATGCCCTGGCCTC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCACGCGGATGCCCTGGCCTC..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG---GAGAGCCACATAATGCAC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCACGCGGATGCCCTGGCCT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------CTG---CTTTTCGTTGCAGT....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGCGGATGCCCTGGCCTCT.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCGTAACATTTAAGACT---------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCACGCGGATGCCCTGGCC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---GAGAGCCACATAATGCACGC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCCACATAATGCACGCGGATG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AAGACT---------------------------GTGTCAGGAATATATGT--------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG---GAGAGCCACATAATGCACGCGGAT.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAACATTTAAGACT---------------------------GTGTCAGGAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCGTAACATTTAAGACT---------------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CGTAACATTTAAGACT---------------------------GTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTTAAGACT---------------------------GTGTCAGGAATATATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTCATACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCTTAT-----------GAATAAC-AC---..........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAAGACT---------------------------GTGTCAGGAATATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCGGATGCCCTGGCCT...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AC---TT-TTAC-----------CTG---CTTTTCGTTGC.......................................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCACGCGGATGCCCTGGCCT...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CATTTAAGACT---------------------------GTGTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACATAATGCACGCGGATGCCC.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGCAGAATCG---GAGAG........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCG---GAGAGCCACATAAT...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG---GAGAGCCACATAATGCAC...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGCGGATGCCCTGGC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCGGATGCCCTGGCCTCTGCCTAT...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CCTCGTAACATTTAAGACT---------------------------GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TTAAGACT---------------------------GTGTCAGGAATATATGT--------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGCACGCGGATGCCCT................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCGTAACATTTAAGACT---------------------------GTGTCAGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCGTAACATTTAAGACT---------------------------GTGTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAATGCACGCGGATGCCCT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................ACATTTAAGACT---------------------------GTGTCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTTTAGTTAT---------------------------------------------------GGA-A-TGTTTTTTATACTGCTTCTGA-----------TTT-------------------------------------------------------------------------------------------------------ACAGCTT--AAC-TTTAATTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATAGTAC-----------TGATTAG-AA---TG-TAAC-----------CCG---TTTTTTGTTGCAGAATCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCTCTGGCTATCCGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCGGATGCCCTGGCCTC..........2111.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC-----------CCG---TTTTTTGTTGCAG.....................................................2011.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACGCGGATGCCCTGGCCTCTGG.......2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGCACGCGGATGCCCTT...............2111.0011000000
droYak3
ATTTCCAA--CGTATATA------CTATA----------CTGC------------------------AAT------ATGT-----------------------------------------------------------------------------------------------------------------------------------------------------ATTTAGCTATAAA-ATCTTTCTTCATACAGCTTTTGA--------------------------------------------------------------------------------------------------------------------TAAATCAT--AAA-TCATTTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATCTTAC-----------TGATTAC-AA---TT-TTACTC-----------C---T-TTTTTTTGCAGAATCG---GAGAGCCACCTAATGCACGCGGATGCCCTGGCCTCTGGCTACCCGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGATGCCCTGGCCTCTGGCTACC..2711.00100100000000
droEug1
GTATTTTAAAAATTT-------------------TTC--TT----------------------------------------------TTTAAGTCTTCGGTCT----------------------------------------------------------------------------------------------------------------------------------------TGA-G-AGATTTT-------------------------------------------------------------------------------------------------------------TC--------------------------------------------AAGGCACCAAAATAAACTAAACAATTAATATTTAAAAACA----------------------------------------------------------------------AT-------------TTAAAAAGATTAATAAAACT---------------------------GTAG------------------------TATTATAATTTATAAATAAGTACATATATGTTTCACTGATTCTTGTAT-----------TAATTTCGAA---TT-T--CTC---------CTT--TA-TTTTCTTGCAGAATCG---GAAAGCCATATAATGCACGCGGATGCCCTGGCCGCTGGTTATCCGSizeHit CountTotal NormTotal
No Reads
droBia1
GCACGTTCGATATCA-------------------CTCTACTTA------------------------AAC------ATAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAGA--CTAGTGATCTGTTTTTGAATTCATG-----------------------------TTGC-----------TT--------------------------------------------AATGCTCTTGGTTAAACCACTGCAGCGGTCATCAAACAAA----------------------------------------------------------------------TC-------------TCTAA-----------AACTTTATTTACCTTATAAAAAATGTTGTCAGAAGCAATGATGTTTTTTCTTTAAGTAGTA----------GTAGGGAA-TCCTCTTAGGTCCTCTGATCCCCCTAT-----------TGACCTC-GC---TT-A--C-----------C-----T-CGCGCTTTCAGAGTCG---GAGAGCCACATAATGCACGCGGATGCCCTGGCCGCTGGCTACCCGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTAGAATTTTTATGAATGTT-------------GC-------------------------------------------------GTTTAATAC-----------------------------------------------------------------------------------------CGGTGGCTTTTTTGACATTAATTTTAAAATGAAAAAAATGTTTACATTTAGCAAGACT-ATCTTTATACATATA-------------------------------------------------------------------------------------------------GA----------------AACCTAAGAAT--------ACA-TTCAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCGCCCAA-----------TAACTAA-AA---TT-TTTCC----------TCA---C-TTTTCTTGCAGAATCG---GAAAGCCACATAATGCACGCGGATGCCCTGGCTGCAGGTTATCCGSizeHit CountTotal NormTotal
No Reads
droEle1
ATATCTCAGCAGTCA-------------------ACC--TTTTTTATA--------------G------ATTATTGATAGATTATTGTTAAA----------------------------------------------------AGGTAAGGAAAGAAA--AAAGTGTGAGTTAA-------AGTGGT-----TGTCGGTAA--------------------------------ATAGGACT-ATGTATAT-------------------------------------------------------TA---------------------------------------------------GGTTACTATTTTAAAATTTA-GAAA--------AAT-GTTTGCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTCGTAC-----------GAACTTC-CA---CTTA--CTCCGTTAT---TTT-T-TTTTTTTTGTCAGAATCG---GAGAGCCATATAATGCACGCGGATGCCCTGGCCTCTGGCTATCCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATATTTCATTTATTTAAAGGCTACGTTA--------T--TTTCATTAG--------------A------TTAAGA---------AAAATAAA---G---------------------------------------------------------------------GGTTAATTAC-------AGT--TAACTTTTTCGGTAA--------------------------------TT---------------------------------------------------------AGACGAAGACTATCAAACGTTTAATTTAATTTAAAGTTTAAAGTTTTAAAATGTACCAGAGAG---------TCTCTAAGTCTAT--GAGA--------AAGTTTTAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTCGTAC-----------TAACTGC-CA---TT-TATCT----------CCG---C-TTTTCTTGCAGAATCG---GAGAGCCATATAATGCATGCGGATGCCCTGGCCTCTGGGTATCCTSizeHit CountTotal NormTotal
No Reads
droFic1
TTACGTTAAACAATA-------------------TACT-----------------------------AAT------GTAT---------------------------------------------------------------------------------------------------------------------------------------------------------AGCCAGAAA-AG-------------------GATATAAACTAGA-----------------------------------------------------------------------T---------------------------------TAAATTAAAAACT-GTTACCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCTCGTTT-----------TAACTTC-TC---TT-TTTT-----------CTACCTC-CTCTGTTGCAGAATCG---GAAAGCCATATAATGCATGCGGATGCCCTGGCCGCTGGCTATCCGSizeHit CountTotal NormTotal
No Reads
droKik1
ATATTTATATATAT--------ATTTAA--------G--AGCCTTACTCTATGATGTTTATATGTATAGTGTAA--A-----------------------------------TAATAGCACGAGAACTCAGTGATTCTTAAGATGAATCAAGATTACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTTTTCAAACTTTATATTAATTGTTATATTTTGTATACTTTAACTATCTTTGGTTTCTGTAAAACTCTTTTAATAACATTACAATTTAAATAGTGCAATTAAAAAGATTA----------------------AAATATATTTTCAAATATAA----------------------------------------------------------------CT--------------AAA----------------CTCCTTTATATTTTG---TTTCTCCCTTTAGAGTCT---GAAAGCCATATAATGCACGCCGATGCTTTGGCCGCCGGTTATCCGSizeHit CountTotal NormTotal
No Reads
droAna3
ATTTTTGAAGATTCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGGGTTTGA-----------TTTTATATCTAGAAGTAAACGAATTGTTTTTAAATTTTAA-----------------------------TTCCAAAGAGAATACTTACTATCTAATTATTTA--AAA--------AAATT--------------CAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAA-----------TAACCTT-------T-TATTTT--------TCAA---AATTCTGTTTTAGAATCG---GAAAGTCATATAATGCATGCCGATGCCCTGGCGGCTGGATATCCGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCATGCCGATGCCCTGGCGGCTG........2611.001010000
droBip1
ACAAGTTTA-------T-----------AAGACTTTA--AATTTTATA--------------G------T-------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAAAATTA-----------------------------------------------------------------------TTAAAAAGA------------------------------------AT-CGTAGCTAATT----AAC------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA--------------------AGTCCCTAAG-----------TAACTGA-------A-TAAT-----------TTT---GTTATTTTTTTAGAATCG---GAAAGTCATATAATGCACGCCGATGCCCTGGCCTCCGGCTATCCGSizeHit CountTotal NormTotal
No Reads
dp5
GGATCCGAATGGCT--------TTCCAA--------C--TGTCGTACA--------------A------TTCAGTG--------AAAATCAT---G----------GATGTAAAACTGTATGAAAACTCAAGAT---AT--AATGGCTCTCGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAACAGT----------------------------------------------------------------------------T------------------------------------------------------------------------------TATTTGAATTGATGAATGA--------ATGCTCCAC--------GTT-CTTGTTTATTA-------TTAACGTT-CGACTC--------TCTT---GCTCTTTTTACAGAATCG---GAAAGCCATATAATGCACGCCGATGCCCTGACCTCTGGCTATCCGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---GAAAGCCATATAATGCACG..........................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATGCACGCCGATGCCCTGAA.............2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCATATAATGCACGCC........................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGA--------ATGCTCCAC--------GTT-CTTGT.............................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCCGATGCCCTGACCTCTGGCT.....2611.0010100000000
droPer2
GGATCCGAATGGCT--------TTCCAA--------C--TGTCGTACA--------------A------TTCAGTG--------AAAATCAT---G----------GATGTAAAACTGTTTGAAAACTCAAGAT---AT--AATGGCTCTCAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAGAGT----------------------------------------------------------------------------T------------------------------------------------------------------------------TATTTGAATTGATGAATGA--------ATGCTCCAC--------GTT-CTTGTTTATTA-------TTAACTTT-CGACTC--------TCTT---GCTCTTTTTACAGAATCG---GAAAGCCATATAATGCACGCCGATGCCCTGAACTCTGGCTATCCGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.........................................................................................................................................AT--AATGGCTCTCAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC...................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGCCGATGCCCTGAACTCTG........2311.001010000
droWil2
ACTCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCTC--------TCTCTCTC-TTTATTTGCAGAATCT---GAAAGCCATATAATGCATTCGGATGCTTTGTCTGTGGGTCATCCGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCCATATAATGCATTCGGATGCTT.................2811.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATAATGCATTCGGATGCTT.................2411.00100100
droVir3
TGTGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-----------TAATTAT-AA---TT-TTACCT--------GCATTC-T-CTCCTGTACAGAATCGGCGGAAAGTCAACTAATGCATGCGGAGGCGCTGCCGGTGGGTCATCCCSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTCAACTAATGCATGC.........................1911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGCATGCGGAGGCGCTGCC.............2311.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TTATCTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------C-----T-CTCGCACACAGAATCGGCCGAAAGTCAAATAATGCATGCAGAGGCTCTGCCCGTTGGACATCCTSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAATCCGCTGAAAGTCCAATAATGCAGGCAGAGGCGTTGCCGGTGGGTCACCCGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/18/2015 at 10:13 PM