ID:

dsi_18892

 Coordinate:

x:20416267-20416416 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.9 -2.8 -2.2

Flybase annnotation

CDS [x_20416417_20416659_+]; exon [x_20416417_20416659_+]; intron [x_20415381_20416416_+]

Repeatable elements

NameClassFamilyStrand
PROTOP_BDNAP+
mature
  1. dsi_18892  x:20416295-20416320 +
  2. node_50072:215-240 +
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCGAGCGGAAAGAGAGCAAATTTGGCCTTCACCAAAAAAGTGGATGCATAGTGCCAAACCAATGTATGGCCGTTACGCATCTTGTTATTTTAGTGTCTTTGGTACTATACATATATACAAAGCGTTATTCATTTGTACTAATAGGCCAATCTCTATACTCAAAATTGATTATGGATTAACTTTAACTTCTACCCAACAGACCATGAGCTTATTGAGTCCGAGGACCATGTGGAGGTCAATGGTATTACC
******************************************************************************.............(((((.(((((................))))))))))......******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR902009
testis
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 M024
male body		 M025
embryo
 O002
Head
 GSM343915
embryo
.....GCGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 0 20 201.70 4034 2436 1428 0 0 170 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCC.............................................................................................................................................................................................................................. 23 0 20 72.55 1451 1035 0 0 99 304 0 0 13 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 0 20 50.25 1005 0 0 0 904 0 0 0 69 7 0 25 0 0
............GAGAGCAAATTTGGCCTTCACCAA...................................................................................................................................................................................................................... 24 0 20 34.25 685 0 0 684 0 0 0 0 0 1 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGG................................................................................................................................................................................................................................ 21 0 20 31.95 639 101 536 0 0 0 2 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 22 0 20 24.40 488 0 375 0 0 100 0 2 11 0 0 0 0 0
............GAGAGCAAATTTGGCCTTCACCA....................................................................................................................................................................................................................... 23 0 20 23.20 464 0 0 462 0 0 0 2 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 18 0 20 16.20 324 0 0 324 0 0 0 0 0 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGTGTCTTTGGT.................................................................................................................................................. 26 0 2 13.50 27 3 0 0 7 5 6 0 6 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 23 0 20 12.65 253 0 0 148 0 0 0 105 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTC........................................................................................................................................................................................................................... 26 0 20 9.00 180 27 9 0 32 112 0 0 0 0 0 0 0 0
.................................................................................CTTGTTATTTTAGTGTCTTTGGT.................................................................................................................................................. 23 0 2 8.00 16 5 1 0 1 2 2 0 4 1 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCAAA..................................................................................................................................................................................................................... 26 0 20 7.90 158 0 1 0 0 0 0 157 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCAA...................................................................................................................................................................................................................... 25 0 20 7.30 146 0 0 146 0 0 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCA....................................................................................................................................................................................................................... 24 0 20 7.10 142 0 0 0 0 0 0 107 0 35 0 0 0 0
.......................................................................................................TACTATACATATATACAAAGCGTTATT........................................................................................................................ 27 0 1 7.00 7 0 0 0 3 0 3 0 1 0 0 0 0 0
........................................................................................................ACTATACATATATACAAAGCGTTATT........................................................................................................................ 26 0 1 7.00 7 0 0 0 1 2 2 0 2 0 0 0 0 0
.................................................................................................................................................................................................................TTATTGAGTCCGAGGACCATGTGGA................ 25 0 1 5.00 5 0 0 0 2 0 1 1 1 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 24 0 20 4.55 91 0 0 0 56 0 15 0 20 0 0 0 0 0
.................................................................................CTTGTTATTTTAGTGTCTTTGGTA................................................................................................................................................. 24 0 1 4.00 4 2 0 0 1 0 1 0 0 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGTGTCTTTGG................................................................................................................................................... 25 0 3 4.00 12 0 0 0 5 2 5 0 0 0 0 0 0 0
............................................................................................................TACATATATACAAAGCGTTATTCATT.................................................................................................................... 26 0 1 3.00 3 0 0 0 0 2 1 0 0 0 0 0 0 0
..............................................................................................................................................TAGGCCAATCTCTATACTCAAAATTGA................................................................................. 27 0 1 3.00 3 0 0 0 1 0 1 0 1 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGTGTCTTTGGTA................................................................................................................................................. 27 0 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTTAACCCAACAGACCATGAGCTTAT..................................... 26 2 1 3.00 3 0 0 0 0 0 2 0 1 0 0 0 0 0
..............................................................................................................................................................................................TACCCAACAGACCATGAGCTTATTGAG................................. 27 0 1 3.00 3 0 0 0 1 0 0 1 1 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCTTC........................................................................................................................................................................................................................... 25 0 20 2.40 48 0 0 0 0 45 0 0 3 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCA.............................................................................................................................................................................................................................. 23 1 20 2.10 42 16 26 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 29 0 20 2.10 42 0 1 0 25 14 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................TAACTTTAACCCAACAGACCATGAGCT........................................ 27 2 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TAACCCAACAGACCATGAGCTTATTGAG................................. 28 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TATTGAGTCCGAGGACCATGTGGA................ 24 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................TTTAACTTTAACCCAACAGACCATGAGCT........................................ 29 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..........................................................................................................TATACATATATACAAAGCGTTATT........................................................................................................................ 24 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCATGT................... 27 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCATG.................... 26 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TAGGCCAATCTCTATACTCAAAATT................................................................................... 25 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCA...................... 24 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................................GATTATGGATTAACTTTAACTTC............................................................ 23 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TATTGAGTCCGAGGACCATGTGGAGG.............. 26 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................................................TACTCAAAATTGATTATGGATTAACTT................................................................... 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGTAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 1.70 34 1 28 0 0 5 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 16 0 20 1.20 24 0 0 0 0 0 0 24 0 0 0 0 0 0
.....GCGGAAAGAGAGTAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 1.15 23 0 23 0 0 0 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTC........................................................................................................................................................................................................................... 20 0 20 1.15 23 0 0 0 0 0 0 23 0 0 0 0 0 0
..................................................................................................................................CATTTGTACTAATAGGCCAATCTCTA.............................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TTTATTATGGATTAACTTTAACTTTAAC......................................................... 28 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................CTTGTTATTTTAGTGTCTTTGGTACT............................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TAGGCCAATCTCTATACTCAAAATTGATT............................................................................... 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................AATCTCTATACTCAAAATTGATTATGGA.......................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................CATCTTGTCATTTTAGTGTCTTTGGTA................................................................................................................................................. 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TTAACTTTAACCCAACAGACCATGAGC......................................... 27 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................TGGTACTATACATATATACAAAGCGTTA.......................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TAGGCCAATCTCTATACTCAAAATTGAT................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CATGAGCTTATTGAGTCCGAGGACCATG.................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CAGACCATGAGCTTATTGAGTCCGAG........................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................ATTCATTTGTACTAATAGGCCAATCTC................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................TAACCCAACAGACCATGAGCTTATT.................................... 25 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGAGTCCGAGGACCATGTGGAGGTCAA.......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCCGAGGACCATGTGGAGGTCAATGGT...... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................TTAACTTCTACCCAACAGACCATGAGC......................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACCCAACAGACCATGAGCTTATTGA.................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................GATTATGGATTAACTTTAACTTTAAC......................................................... 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................AAAGTGGATGCATAGTGCCAAACCAA........................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................TTTAACTTTAACCCAACAGACCATGAGC......................................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CACCATGAGCTTATTGAGTCCGAGGAC........................ 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................ACAGACCATGAGCTTATTGAGTCCGA............................ 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................TATACATATATACAAAGCGTTATTCA...................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATTGATTATGGATTAACTTTAACTT............................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................AATTGATTATGGATTAACTTTAACTTC............................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTAACTTTAACCCAACAGACCATGAGCT........................................ 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTGTACTAATAGGCCAATCTCTA.............................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTTAACCCAACAGACCATGAGCTTATTGAG................................. 30 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCAT..................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TTGATTATGGATTAACTTTAACTTTAAC......................................................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................TATACATATATACAAAGCGTTATTCAT..................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGAGTCCGAGGACCATGTGGAGGTC............ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................ATTTGGCCTTCACCAAAAAAGTGGA............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TATTGAGTCCGAGGACCATGTGGAGGTC............ 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................AACTTTAACCCAACAGACCATGAGCT........................................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TACATATATACAAAGCGTTATTCA...................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCCGAGGACCATGTGGAGGT............. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCATGTG.................. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................TACTATACATATATACAAAGCGTTAT......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGATTATGGATTAACTTTAACTTC............................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TAACTTCTACCCAACAGACCATGAGCT........................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TTGATTATGGATTAACTTTAACTTC............................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................ATCTTGTTATTTTAGTGTCTTTGGTA................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TTCTACCCAACAGACCATGAGCTTAT..................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................AACTTTAACTTTAACCCAACAGACCA.............................................. 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................TGGTACTATACATATATACAAAGCGTT........................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATGGATTAACTTTAACTTCTACCCAACAG.................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................GAGCTTATTGAGTCCGAGGAG........................ 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CTTTAACTTTAACCCAACAGACCATGAGC......................................... 29 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................CTTGTTATTTTAGTGTCTTTGGTAC................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTATGGATTAACTTTAACT.............................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AACCCAACAGACCATGAGCTTATTGA.................................. 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................AAATTTGGCCTTCACCAAAAAAGTGGA............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TATTATTGAGTCCGAGGACCATGTGGA................ 27 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TTGATTATGGATTAACTTTAACTTT............................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................TTTGGCCTTCACCAGAAAAGTGGA............................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................TTTGGCCTTCACCAAAAAAGTGG.............................................................................................................................................................................................................. 23 0 20 0.85 17 0 0 0 15 0 0 0 2 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTCAC......................................................................................................................................................................................................................... 28 0 20 0.80 16 0 0 0 4 12 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCTTT............................................................................................................................................................................................................................ 25 1 20 0.75 15 5 9 0 1 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGAACATTTGGCCTT............................................................................................................................................................................................................................ 25 2 20 0.75 15 2 0 0 8 5 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTA........................................................................................................................................................................................................................... 26 1 20 0.75 15 11 0 0 1 2 0 0 1 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTC............................................................................................................................................................................................................................ 25 1 20 0.75 15 7 0 0 3 5 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTT.................................................................................................................................................................................................................................. 19 0 20 0.70 14 1 13 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CTTGTTATTTTAGTGTCTTTGG................................................................................................................................................... 22 0 3 0.67 2 0 1 0 0 0 1 0 0 0 0 0 0 0
.....GCGGAAAAAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.65 13 0 0 0 8 5 0 0 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 23 0 20 0.65 13 8 0 0 0 0 1 0 3 1 0 0 0 0
...........AGAGAGCAAATTTGG................................................................................................................................................................................................................................ 15 0 20 0.60 12 0 0 0 0 0 0 12 0 0 0 0 0 0
..............................................................................CATCTTGTGATTTTAGTGTCTTTGGT.................................................................................................................................................. 26 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGTGTCTTTGGAA................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AATGTATGGCCGTTAC............................................................................................................................................................................. 16 0 20 0.50 10 0 0 0 0 0 0 10 0 0 0 0 0 0
.....................TTTGGCCTTCCCCAAAAAAGTGGA............................................................................................................................................................................................................. 24 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTCA.......................................................................................................................................................................................................................... 27 0 20 0.50 10 0 2 0 5 3 0 0 0 0 0 0 0 0
................................................................................TCTTGTTATTTTAGTGTCTTTGGT.................................................................................................................................................. 24 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCCGGGGACCAGGTGGAGGT............. 20 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....AGCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 26 0 20 0.40 8 1 0 0 0 0 2 2 3 0 0 0 0 0
....................................................TGCCAAACCAATGTATGGCCGTTACGCA.......................................................................................................................................................................... 28 0 20 0.40 8 0 0 0 4 0 3 0 0 1 0 0 0 0
.....GCGGAAAGAGAGCGAATTTGGCC.............................................................................................................................................................................................................................. 23 1 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0
..CGAGCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 28 0 20 0.35 7 1 0 0 2 1 2 0 1 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGACCTT............................................................................................................................................................................................................................ 25 1 20 0.35 7 0 0 0 0 7 0 0 0 0 0 0 0 0
.................................................................................CTTGTTATTTTAGGGTCTTTGGT.................................................................................................................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........AAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 20 0 20 0.30 6 0 0 0 0 0 0 6 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCTTCAC......................................................................................................................................................................................................................... 27 0 20 0.30 6 0 0 0 0 5 0 0 0 0 0 1 0 0
..............................................................ATGTATGGCCGTTACGCA.......................................................................................................................................................................... 18 0 20 0.30 6 0 0 0 0 0 0 6 0 0 0 0 0 0
AGCGAGCGGAAAGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 27 0 20 0.30 6 0 0 0 0 5 1 0 0 0 0 0 0 0
AGCGAGCGGAAAGAGAGCAAATTTG................................................................................................................................................................................................................................. 25 0 20 0.30 6 4 1 0 0 0 0 0 0 1 0 0 0 0
.....GCGGAAAGAGAGAAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.30 6 0 0 0 0 0 6 0 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCTTCA.......................................................................................................................................................................................................................... 26 0 20 0.25 5 0 0 0 0 5 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGGACCAATTGGAGGGCAATGG....... 22 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................GTACTAATAGGCCGATGACT............................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
............GAGAGTAAATTTGGCCTT............................................................................................................................................................................................................................ 18 1 20 0.25 5 0 0 5 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTACTAATAGGCCGA.................................................................................................... 15 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....AGCGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 25 0 20 0.25 5 3 0 0 0 0 0 0 0 0 0 2 0 0
AGCGAGCGGAAAGAGAGCAAATTT.................................................................................................................................................................................................................................. 24 0 20 0.25 5 1 3 0 0 1 0 0 0 0 0 0 0 0
..........................................................................TACGCATCTTGTTATTTTAGTGTCTT...................................................................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....GCGGAAAGAGAGAAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.20 4 0 1 0 0 0 2 0 1 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTAG................................................................................................................................................................................................................................ 21 1 20 0.20 4 0 2 0 0 0 0 0 0 0 0 0 2 0
.....GCGGAAAGAGAGTAAATTTG................................................................................................................................................................................................................................. 20 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 23 0 20 0.20 4 0 0 0 2 0 2 0 0 0 0 0 0 0
.....GCGGAAAGAGAGAAAATTTGGCC.............................................................................................................................................................................................................................. 23 1 20 0.20 4 0 0 0 0 4 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTA................................................................................................................................................................................................................................. 20 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0 0
.....GCGTAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.20 4 0 0 0 4 0 0 0 0 0 0 0 0 0
...............................................................TGTATGGCCGTTACGCAT......................................................................................................................................................................... 18 0 20 0.20 4 0 0 0 0 0 0 4 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCT....................................................................................................................................................................................................................... 24 1 20 0.20 4 0 0 0 0 0 0 4 0 0 0 0 0 0
.............................................................................GCATCTTGTTATTTTAGTGTCTTT..................................................................................................................................................... 24 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGTGTCTTTG.................................................................................................................................................... 24 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................GCATCTTGTTATTTTAGTGTC........................................................................................................................................................ 21 0 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..CGAGCGGAAAGAGAGCAAATTTGGCC.............................................................................................................................................................................................................................. 26 0 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCAAAT.................................................................................................................................................................................................................... 27 1 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0
....AGCGGAAAGAGAGCAAATTTGG................................................................................................................................................................................................................................ 22 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCG.............................................................................................................................................................................................................................. 23 1 20 0.15 3 0 2 0 1 0 0 0 0 0 0 0 0 0
.............AGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 17 0 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0
.....GCGGAAAGAGAGAAAATTTGGCCTTC........................................................................................................................................................................................................................... 26 1 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0
.....TCGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.15 3 1 1 0 0 0 1 0 0 0 0 0 0 0
AGCGAGCGGAAAGAGAGCAAATTTGGCC.............................................................................................................................................................................................................................. 28 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAACTTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 28 0 20 0.15 3 2 0 0 0 0 0 0 1 0 0 0 0 0
.....GCGGAAAGAGAGTAAATTTGGCCTTA........................................................................................................................................................................................................................... 26 2 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCATT............................................................................................................................................................................................................................ 25 1 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0
......CGGAAAGAGAGCGAATTTGGCCT............................................................................................................................................................................................................................. 23 1 20 0.15 3 0 0 0 0 3 0 0 0 0 0 0 0 0
.......................................................................................ATTTTAGTGTCTTTGGT.................................................................................................................................................. 17 0 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................AATCTTGTTATTTTAGTGTCTTTGGTA................................................................................................................................................. 27 1 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGT........................................................................................................................................................... 17 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....GCGAAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCATTA........................................................................................................................................................................................................................... 26 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................ACCAATGTATGGCCGTTACG............................................................................................................................................................................ 20 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCAC...................................................................................................................................................................................................................... 25 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.........AAAGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 18 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 27 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
...................AATTTGGCCTTCACCAAAAAAGTGG.............................................................................................................................................................................................................. 25 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..........AAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 19 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.....GAGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
AGCGAGCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 30 0 20 0.10 2 0 0 0 1 0 1 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGGCCTTC........................................................................................................................................................................................................................... 24 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.........AAAGAGAGCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 25 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGGC.............................................................................................................................................................................................................................. 23 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.....GCTGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.10 2 0 0 0 1 0 1 0 0 0 0 0 0 0
....AGCGGAAAGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCGT............................................................................................................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGG................................................................................................................................................................................................................................ 19 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.....GCGAAAAGAGAGCAAATTTGGCC.............................................................................................................................................................................................................................. 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...GAGCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 27 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.....TCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
...........AGAGAGCGAATTTGGCCTTCACCA....................................................................................................................................................................................................................... 24 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTCACCA....................................................................................................................................................................................................................... 30 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATCTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
....AGCGGAAAGAGAGCAAATTTG................................................................................................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGT................................................................................................................................................................................................................................ 21 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGACCTT............................................................................................................................................................................................................................ 24 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................CTTGTTATTTTAGTGTCTTTGGTG................................................................................................................................................. 24 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TGCATAGTGCCAAACCAATGTATGGC................................................................................................................................................................................... 26 0 20 0.10 2 0 0 0 0 0 0 0 1 0 0 0 0 1
....................ATTTGGCCTTCACCAAAAAAGTGG.............................................................................................................................................................................................................. 24 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTAGCCTT............................................................................................................................................................................................................................ 19 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
...GAGCGGAAAGAGAGCAAATTTGGCC.............................................................................................................................................................................................................................. 25 0 20 0.10 2 1 0 0 0 0 0 0 1 0 0 0 0 0
.....GCGGAAAGAGAGAACATTTGGCCTTCACC........................................................................................................................................................................................................................ 29 2 20 0.10 2 0 0 0 1 1 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCC............................................................................................................................................................................................................................. 24 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.........AAAGAGAGCAAATTTGGCCTTC........................................................................................................................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.....GTGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAAT.................................................................................................................................................................................................................................... 17 0 20 0.10 2 0 0 0 1 0 0 1 0 0 0 0 0 0
..............................................................................CATCTTGTTATTTTAGTGTCTTTGGA.................................................................................................................................................. 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................CGACCGACCTTGAGCTTAT..................................... 19 3 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................ACCGACCTTGAGCTTAT..................................... 17 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................ATTTTAGTGTCTTTG.................................................................................................................................................... 15 0 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................CATCTTGCTATTTTGGTGTCTTTG.................................................................................................................................................... 24 2 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................TGCCAAACCAATGTATGGCCGTTCCGCA.......................................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGGCCTTCACA........................................................................................................................................................................................................................ 27 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................AATGTATGGCCGTTA.............................................................................................................................................................................. 15 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........AAAGAGAGCAAATTTGGCCTTCAC......................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............GAGCAAATTTGGCCTTCACCAA...................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................TGGCCTTCACCAAAAAAGTGG.............................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCTGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGGGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....TCGGAAAGAGAGCAAATTTGGCG.............................................................................................................................................................................................................................. 23 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................TTGGCCTTCACCAAAAAAGTGG.............................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCCC............................................................................................................................................................................................................................ 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAGAGAGAGCAAATTTGGCC.............................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGGCTT............................................................................................................................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........AGAGAGCGAATTTGGC............................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......CGGAAAGAGAGAAAATTTGGCCTT............................................................................................................................................................................................................................ 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....CGCGGAAAGAGAGCAAATTTGGCCC............................................................................................................................................................................................................................. 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........AGAGAGCAAATTTGGCCTTCACCAAAA.................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......CGGAAAGAGAGCCAATTTGGCCTT............................................................................................................................................................................................................................ 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.GCGAGCGGAAAGAGAGCAAA..................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCAAC..................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TATTGAGACGGAGGACTA...................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTCCACCA....................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTAGCC.............................................................................................................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTG................................................................................................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....CGCGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....GCGGAAAGAGAGCGAATTTGGCCTTC........................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTCGGCCTTCACCAAT..................................................................................................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGAGATCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........GAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 22 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGAGAGCAACTTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTCAT......................................................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....CCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTG................................................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGGCCTTG........................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
AGCGAGCGGAAAGAGAGCAAAT.................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......CGGAAAGAGATCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....GCGGAAAGAGAGCAAATATGGC............................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGGAAGAGAGCAAATTTGG................................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCACT............................................................................................................................................................................................................................ 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........ATAGAGCAAATTTGGCCTTCACCAA...................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTGC........................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCGAATTTGGCCTTCAC......................................................................................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................TGCATAGTGCCAAAGCAATGTATGGCCGT................................................................................................................................................................................ 29 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGAACATTTGGC............................................................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGCCCTTC........................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGCAAGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCATCC........................................................................................................................................................................................................................... 26 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................ACCAATGAATGGCCGTTACGCATCTGGT.................................................................................................................................................................... 28 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........AAGAGAGCAAATTTGGCCTTCACCAAA..................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....TCGTAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGACCTTCACC........................................................................................................................................................................................................................ 29 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
AGCGAGCGGAAAGATAGAAAATT................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...GAGCGGAAAGAGAGCAAATTTGGC............................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......CGGAAAGAGAGCAAATTTGACC.............................................................................................................................................................................................................................. 22 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................ATGTATGGCCGTTACGCATCTTGTTA.................................................................................................................................................................. 26 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCAAAAGC.................................................................................................................................................................................................................. 29 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........ATAGAGCAAATTTGGCCTTCACCAAA..................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGAAAAGAGAGCAAATTAGGCCT............................................................................................................................................................................................................................. 24 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGCGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..CGAGCGGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCCTA........................................................................................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....AGCGGAAAAAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTAGCCTTC........................................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......GGAAAGAGAGAAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 27 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGACCT............................................................................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
AGCGAGCGAAAAGAGAGCAAATT................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCATTCACAA....................................................................................................................................................................................................................... 30 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....GCAGAAAGAGAGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................TGCATAGTGCCAAACCAATGTATGGCC.................................................................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...GAGCGAAAAGAGAGCAAATTTAGCCTT............................................................................................................................................................................................................................ 27 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCAACTTTGGCCTTC........................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.GCGAGCGGAAAGAGAGCAAATTTGGCCTT............................................................................................................................................................................................................................ 29 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................TAGTGCTAAACCAATGTATGGCCGTTA.............................................................................................................................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................TGTATAGTGCCAAACCAATGTATGGC................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCCTCACCAAAA.................................................................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................TTGGCCTTCACCAAAGAAGTGG.............................................................................................................................................................................................................. 22 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGCGAATTTGGC............................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGAGAAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 29 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....GCGGAAAAAGAGCAAATTTGGCCC............................................................................................................................................................................................................................. 24 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........AGAGAGCAAATTTGGCCTTCACCATT..................................................................................................................................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....GCGGAAAGAGAGCAACTTTGGC............................................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........GAAAGAGAGCAAATTTGGCCTTCACC........................................................................................................................................................................................................................ 26 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGGCCTTAAC......................................................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........AAAGAGAGCAAATTTGGCCTTCACCA....................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGAGCGCAAATTTGGCC.............................................................................................................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGGGTAAATTTGGCCTT............................................................................................................................................................................................................................ 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGACATTAAATTTGGCC.............................................................................................................................................................................................................................. 23 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....GCGGAAAGAGGGCAAATTTGGCCT............................................................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................AAATTTGGCCTTCACCAAAAAAGT................................................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........AGAGAGCAAAATTGGCCTTCACCAAA..................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....GCGGAAAGAGAGCAAATTTGACC.............................................................................................................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......GGAAAGAGAGCAAATTTGGCCTTCA.......................................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCGCTCGCCTTTCTCTCGTTTAAACCGGAAGTGGTTTTTTCACCTACGTATCACGGTTTGGTTACATACCGGCAATGCGTAGAACAATAAAATCACAGAAACCATGATATGTATATATGTTTCGCAATAAGTAAACATGATTATCCGGTTAGAGATATGAGTTTTAACTAATACCTAATTGAAATTGAAGATGGGTTGTCTGGTACTCGAATAACTCAGGCTCCTGGTACACCTCCAGTTACCATAATGG
********************************************************************************************************************.............(((((.(((((................))))))))))......****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M053
female body
 GSM343915
embryo
 M024
male body		 M025
embryo
.....................................................................CGGCAATGCGTAGAACAAT.................................................................................................................................................................. 19 0 20 184.30 3686 3686 0 0 0 0 0 0 0 0 0 0 0
...CTCGCCTTTCTCTCGTTTA.................................................................................................................................................................................................................................... 19 0 20 57.00 1140 1140 0 0 0 0 0 0 0 0 0 0 0
........................................................................CAATGCGTAGAACAA................................................................................................................................................................... 15 0 20 17.30 346 0 346 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CGCAATAAGTAAACATGATTATCCGGTT.................................................................................................... 28 0 1 9.00 9 0 0 6 0 0 2 1 0 0 0 0 0
................................GGTTTTTTCACCTACGTATCACGGTT................................................................................................................................................................................................ 26 0 1 7.00 7 0 0 2 4 0 0 1 0 0 0 0 0
..................................................................TACCGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 25 0 5 5.00 25 0 12 1 1 8 1 0 2 0 0 0 0
.CGCTCGCCTTTCTCTCGTT...................................................................................................................................................................................................................................... 19 0 20 4.85 97 94 3 0 0 0 0 0 0 0 0 0 0
...................................................................ACCGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 24 0 5 4.00 20 5 3 5 0 5 0 0 1 0 0 1 0
......................................................................................................................................................AGAGATATGAGTTTTAACTAATACCT.......................................................................... 26 0 1 4.00 4 0 0 2 0 0 2 0 0 0 0 0 0
.................................................................ATACCGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 26 0 5 3.00 15 0 1 2 2 5 0 2 0 3 0 0 0
.......................................................................................................................................................................................ATTGAAATTGGGTTGTCTGGTACT........................................... 24 2 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0
..............................GTGGTTTTTTCACCTACGTATCAC.................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0
............................AAGTGGTTTTTTCACCTACGTATCAC.................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................ACAGAAACCATGATATGTATATAT.................................................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.......................................................................GCAATGCGTAGAACAAT.................................................................................................................................................................. 17 0 20 1.65 33 0 33 0 0 0 0 0 0 0 0 0 0
.........................................................................AATGCGTAGAACAATAAA............................................................................................................................................................... 18 0 9 1.56 14 13 1 0 0 0 0 0 0 0 0 0 0
.............................................................TTACATACCGGCAATGCGTAGAA...................................................................................................................................................................... 23 0 20 1.15 23 0 23 0 0 0 0 0 0 0 0 0 0
.................................................................ATAACAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 26 3 7 1.14 8 0 0 0 0 0 0 0 8 0 0 0 0
..........................................................................................................................CGCAATAAGTAAACATGATTATCCGGT..................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CTGGTACTCGAATAACTCAGGCTCCT......................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGAATAACTCAGGCTCCTGGTACACCT................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGGGTTGTCTGGTACTCGAATAACT.................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................CTACGTATCACGGTTTGGTTACAT....................................................................................................................................................................................... 24 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGATATGAGTTTTAACTAATACCTAATTGA.................................................................... 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................TGGTTTTTTCACCTACGTATCACGGT................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................TTCACCTACGTATCACGGTTTGGTT........................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................AAGTAAACATGATTATCCGGTTAGAGAT.............................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................AGATATTTATATATGTTTCGCAATAAGT...................................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................CGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 22 0 5 1.00 5 0 0 1 2 0 1 0 0 1 0 0 0
.............................AGTGGTTTTTTCACCTACGTATCAC.................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................TCACCTACGTATCACGGTTTGGT............................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................GGTTTTTTCACCTAAGTATCACGGTT................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGATATGAGTTTTAACTAATACCTAA........................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................AACAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 24 3 9 0.67 6 0 0 0 0 0 0 0 6 0 0 0 0
............................................................GTTACATACCGGCAATGCGTAGAACAA................................................................................................................................................................... 27 0 20 0.65 13 0 12 0 0 0 0 0 0 0 0 0 1
..................................................................TAACAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 25 3 7 0.57 4 0 0 0 0 0 0 0 4 0 0 0 0
..........................................................................ATGCGTAGAACAATAAA............................................................................................................................................................... 17 0 9 0.56 5 0 5 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATTAATACCTAGTTGAATTTGAA............................................................. 23 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................TTACATACCGGCAATGCGTAGAACA.................................................................................................................................................................... 25 0 20 0.45 9 0 0 0 0 0 0 0 0 9 0 0 0
.................................................................ATACCTGCAATGCGTAGAACAATAAA............................................................................................................................................................... 26 1 7 0.43 3 0 0 1 0 0 2 0 0 0 0 0 0
......................................................................GGCAATGCGTAGAACAATAAA............................................................................................................................................................... 21 0 5 0.40 2 0 0 1 0 1 0 0 0 0 0 0 0
................................................................CATAACAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 27 3 5 0.40 2 0 0 0 0 0 0 0 2 0 0 0 0
..................................................................AACCGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 25 1 5 0.40 2 0 0 0 0 2 0 0 0 0 0 0 0
...................................................................ACTGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 24 1 5 0.40 2 0 0 0 0 0 0 0 2 0 0 0 0
.............................................................TTACATACCAGCAATGCGTAGAACAA................................................................................................................................................................... 26 1 20 0.35 7 0 7 0 0 0 0 0 0 0 0 0 0
........................................................................CAATGCGTAGAACAATAAA............................................................................................................................................................... 19 0 9 0.33 3 0 3 0 0 0 0 0 0 0 0 0 0
.....................................................................CGGCAATGCGTAGAACAATAAAATCAC.......................................................................................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................TACCGGCAATGCGTAG........................................................................................................................................................................ 16 0 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0
.................................................................ATACCGGCAATGCGTAGAACAATAAAA.............................................................................................................................................................. 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................CGGCAATGCGTAGAACAATAAAA.............................................................................................................................................................. 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................TACCGGCAATGCGTAGAACAATA................................................................................................................................................................. 23 0 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TTAATACCTAGTTGAATTTGAA............................................................. 22 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
.CGCTCGCCTTTCTCTCGTTTAAACCGGA............................................................................................................................................................................................................................. 28 0 20 0.20 4 0 0 0 0 0 0 4 0 0 0 0 0
..............................................................TACATAACAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 29 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................AGACCGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................ACATAACAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 28 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
....................TAAACCGGAAGTGGTTT..................................................................................................................................................................................................................... 17 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0
...................................................................ACAGGCAATGCGTAGAACAATAAA............................................................................................................................................................... 24 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................ACCGGCAATGCGGAGAACAATAAAA.............................................................................................................................................................. 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
..GCTCGCCTTTCTCTCGCTT..................................................................................................................................................................................................................................... 19 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................................................CCCGCAATGCGTAGAACAA................................................................................................................................................................... 19 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CGGATAGAGATAAGAGT........................................................................................ 17 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
............CTCTCGTTTAAACCGGAAGTGGTTT..................................................................................................................................................................................................................... 25 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0
...................TTAAACCGGAAGTGGTTTTTT.................................................................................................................................................................................................................. 21 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0 0
.................................................................ATACCGGCAATGCGGAGAACAATAAA............................................................................................................................................................... 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................ACCGGCAATGCGTAGAACAATAAAT.............................................................................................................................................................. 25 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................ACCGGCCATGCGTAGAACAATAAA............................................................................................................................................................... 24 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................TACCGGCAATGCGTAGAACAATGTAAGC............................................................................................................................................................ 28 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................ACCGGCAATGCGTAGAACAAGAAA............................................................................................................................................................... 24 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................TGGTTTTTTCACGTACGTATCACGGT................................................................................................................................................................................................. 26 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................AATGCGTAGAACAATAAAA.............................................................................................................................................................. 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGACTTCTGGTACACCT................ 17 2 13 0.15 2 0 0 0 0 0 0 2 0 0 0 0 0
......................AACCGGAAGTGGTTTT.................................................................................................................................................................................................................... 16 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
..............................................................TACATACCAGCAATGCGTAGAACAA................................................................................................................................................................... 25 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
...............................................................ACATACCGGCAATGCGTAGAACAA................................................................................................................................................................... 24 0 20 0.15 3 0 0 0 0 0 0 0 0 0 3 0 0
..............................................................TACATGCCGGCAATGCGTAGAACAA................................................................................................................................................................... 25 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................TACCGGCAATGCGTAGAACAATACA............................................................................................................................................................... 25 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................ATACCGGCAATGCTTAGAACAATAAA............................................................................................................................................................... 26 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TATGAGGTTTAACTGATACA........................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................AACAGCAGTGCGTAGAACAATAAAA.............................................................................................................................................................. 25 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................GCAATGCGTAGAACAATAAA............................................................................................................................................................... 20 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................GCAGTGCGTAGAACAATAAA............................................................................................................................................................... 20 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................TTACATACCGGCAATGCGTAGAAC..................................................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
TCGCTCGCCTTTCTCTCGCTTA.................................................................................................................................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................ACATACCGGCAATGCGTAGAACAAT.................................................................................................................................................................. 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0
.............................................................TTACATACCGGCAATGTGTAGAACAA................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................TTACATACCGGCAATGCGTAGGACAAT.................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................CATACCCGCAATGCGTAGAACAA................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................TACCGGCAATGTGTAGAA...................................................................................................................................................................... 18 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................ACATACCGGCAATGCGTAGAATAAT.................................................................................................................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................ACATACCGGCAATGCG........................................................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................GGTTACATACCGGCCATGCGTAGAACAA................................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................ATACCAGCAATGCGTAGAACAAT.................................................................................................................................................................. 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
..................TTTAAACCGGAAGTGGTTTTTT.................................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
...........TCTCTCGTTTAAACCGGAAGTGG........................................................................................................................................................................................................................ 23 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...............TCGTTTAAACTGGAAGTGGTTT..................................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................TTACATACCGGCAATGCGTAGAACAA................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................TTACATAGCGGCTATGCATAGAA...................................................................................................................................................................... 23 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
............CTCTCGTTTAAACCGGAAGTGGTT...................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
TCGCTCGCCTTTCTCTCGTGT..................................................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................TACATACCGGCAATGCGTAGAATAAT.................................................................................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
....................TAAACCGGAAGTGGTTTT.................................................................................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................GGTTTGGTTACATACGGGCAATGCGT.......................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................TTACATGCCGGCAATGCGTAGAACAA................................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
GCGCTCGCCTTTCTCTCGTTT..................................................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...............TCGTTTAAACCGGAAG........................................................................................................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................TAACCGGAAGTGGTCTTTTC................................................................................................................................................................................................................. 20 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
............CTCTCGCTTAAACCGGAAGTGGTT...................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.........TTTCTCTCGTTTAAACCGGAAGTGGT....................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
........CTTTTTCTCATTTAAACCGGAAGT.......................................................................................................................................................................................................................... 24 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................TACCGGCAATGCGTAC........................................................................................................................................................................ 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................TAGCAGTGCGTAGAACAATAAA............................................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................ACATACCGGCAATGCGCAGAACAAT.................................................................................................................................................................. 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
...................TTAAACCGGAAGTGGTTTTTTCA................................................................................................................................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
....TCGCCTTTCTCTCGTTTAAACCGG.............................................................................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................AAACCGGAAGTGGTTTTTC.................................................................................................................................................................................................................. 19 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................TACATACCGGCAATGCGTAGAACGAT.................................................................................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................TTGGTTACATACCGGCAGTGCGTAGAT...................................................................................................................................................................... 27 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................TGGTTACATACCGGCAATGCGTAGAACAAT.................................................................................................................................................................. 30 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................ACATGCCGGCAATGCGTAGAACAA................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................TTACATACCGGCAATGCGTAGAACAAG.................................................................................................................................................................. 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
TCGCTCGCCTTTCTCTCGTTT..................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................CCGGCAATGCGTAGAACAATA................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
..........TTCTCTCTTTTAAACCGGAAGTGGTT...................................................................................................................................................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
........CTTTCTCTCGTTTAAACCGGAAGTGGTT...................................................................................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
....GGGCCTTTCTCTCGTTT..................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....CGCCTTTCTAGCGTTTAAATCGGAAGT.......................................................................................................................................................................................................................... 27 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
........CTTTCTCTCGTTTAAACCGGAAGTGGT....................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
............CTCTCGTTTAAACCGGAAGTGGTTTTT................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
......GCCTTTCTCTCGTTTAAACCGGA............................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
TCGCTCGCCTTCCTCTCGTTT..................................................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
............CTCTCGCTTAAACCGGAAGTGGTTT..................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20416217-20416466 + dsi_18892 AG-CGA--GCGGAAAGAGAGCAAATTTGGCCT------TC-----ACC-AAAAAAGTGGATGCATAGTGCCAAACCAATGTATGGCCGTTACGCATCTTG-TTA-TTTTAGT-GTCTT--------TGGTACTATACA-----TATA----------------------------TACAAAGCGTTATTC-----A-TTTGTACTAATAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGATTATGGA---TTAACTTTA-ACTTCTACCCAACAGACCATGAGCTTATTGAGTCCGAGGACCATGTGGAGGTCAATGGTATTACC
droSec2 scaffold_55:52361-52610 + AG-CGA--GCGGAAAGACAGCAAATTTGGCCT------TC-----ACC-AAAAAAGTGGATGCATAGTGCCAAACCAATGTATGGCCGTTACACATCTTG-TTA-TTTTAGT-GTCTT--------TGGTACTATACA-----TATA----------------------------TACAAAGCGTTATTC-----A-TTTGTACTAATAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGATTATGGA---TTAACTTTA-ACTTCTACCCAACAGACCATGAGCTTATTGAGTCCGAGGACCATGTGGAGGTCAATGGTATTACC
dm3 chrUextra:5356912-5357115 - AG-CGA--GCGGAAAGAGAGCAATTTTGGCCG------TC-----ACC-AAAAAAGTGGCTGCATAGTGCCAAACCAATGTATGGCCGTTACGCATCTTG-TTA-TTCTAGT-GTCTT--------TGGTTCATC--CC-TCC---AT----------------------------GCAATGTTTCCGTATGAGCATTTTTTATTAATAAG----------CTTGTTACGTGG-CATTT---------------TTCTAAAATGATT--GGATGTTTAA----------------------------------------------------------CATTAAATTCTGC
droEre2 scaffold_4845:709390-709553 - TG-CGA--GCGGGAAGAGAGCAATTACTGCCG------CC-----ACCAAAAAAAGTGGCTGCATAGTGCAAAACCAATGTATGGCCGTCACGCATCTTA-TTA-TTCTAGT-GTCTT--------TGTTCTTAC--TA-CCG-ATT----------------------------TATGAAATTAAATAT-----T-TTTGTAAAACCTTT----------TTAGTC-----T-TTAAA---------------CC--------------------------------------------------------------------------------------------CA
droYak3 v2_chrUn_6728:145595-145765 + GG-CGA--GCGAAAAGAGAGCAATTTTGGTCG------TC-----ACC-AAAAAAGTGGCTGCATAGTGCAAAGCCAATGTATGGCCGTTACGCATCTTG-TTA-TTATAAT-GTCTT--------TGGTCTTAC--AC-TAT-G--C----------------AAAATCATTTAAATAAAGTG-----------------TATTTATATTTATTACTCGTAGAATA-----TACTA-------------------------------------------------------------------------------------------------------------TACT
droEug1 scf7180000407331:64492-64564 + TA-ATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-TTTTCTACGTAACAGATCACGAGTTAATCGAATCCGAGGACCATGTGGAGGTCAATGGTACCACC
droBia1 scf7180000297212:19896-20024 - TG-CGA--GCGGAGAAAGCGAGATTTTCGTCT------CC-----ACC-AAAAAATGAGCTGCATATAGCAAAACGAACGCATGGTCGTTACTCATCTTA-GACATTATATTGGTCTT--------TGGTCAGAG--TA-ACT-A--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTTTGCA
droTak1 scf7180000415873:54550-54667 - AG-CGA--GCGGAAAGAGCGAAATTTTCGTCA------CC-----ACC-AAAAATCAGGCTGGATATTGCAAAACGAATGTATGGCCGTTACTCATCTTA-GAGATTATATTGGTCTT--------TACTTTTAC--CC-TAT-A--C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491087:899230-899302 - TA-ATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-ATTTCTATCCGCCAGATCATGAGCTTATCGAATCGGAGGACCATGTTGAGGTCAATGGTATCACC
droRho1 scf7180000777150:8415-8596 + GTGCGA--GCGGAGAGAGCGGAATTTTCGTCG------CC-----ACC-AAAAAACGAGCTGCATATTGCAAAACCAATGTATGGGCGTTACGCATCTTA-GTGATTATATTGGTCTT--------TGGTAATAC--TTA---TAA-C---------------------------AACCTTTATCATCTA-----A-TTTGCATTTCCACT----------TCTATC-----C-CGTTA---------------TTAA---------------------------------------------------------------------------AAACTAATATTTTAACT
droFic1 scf7180000454116:158572-158696 + AT-CCGAAGCGTAAGTACTGATACTCCAGCCA------CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA---------------ACCA--ATTGCTAACTCG---CCAATTTGA-CTTTCCACCC-TCAGATCACGAGCTGATCGAGTCCGAGGATCATGTGGAGGTCAACGGCATCACC
droKik1 scf7180000301587:11186-11300 - AG-AAC--GCG-----------ATTGTCGTTG------CC-----ACC-AAAAATGCAGCCTCATATTGCAAAACGAATGTATGCTCGTGAGGCATCTTG-TTAAATCTATT-GTCTT--------TGGTACAAC--TG-TAT-A--T------------------------------AACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTA
droAna3 scaffold_13117:1924856-1924933 - GA-TTG--ACTTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCTCTCATCC-GCAGATCATGAACTTATCGAGTCCGAGGACCATGTCGAAGTCAATGGCATCACC
droBip1 scf7180000396425:141770-141846 + AC-TAA--CTTGAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCCCACCC-ACAGATCATGAGCTCATCGAGTCAGAGGACCATGTCGAGGTCAATGGAATTACC
dp5 Unknown_group_74:3475-3608 + TG-CGA--GCGATA---GTGCAGATTTCGTCT--G---TT-----CCC-AAAAACGTCGCTGCATATGACCATTGAAATGTAAAGGCATTACTCATCTTA-CTATTAATATT-GTCTT--------TGATTATAC--CT-TGT-A--T-----------------------------CAACGAATTGGTA-----A-TTT----------------------------------------------------------------------------------------------------------------------------------------------------GT
droPer2 scaffold_30:779272-779345 + C----------------------------------------------C-AAACACCTCGCTGCATATGACCATTGAAATGTATGGTCGTTACTCATCTAG-CTATTTATATT-GTCTT--------TGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:7228719-7228834 + AT-CCAAAACGTAAGTCCTGCGA------------------------------------------ACTAGCCCATATATGTAGAG-AATAACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAAATTGATTT-----------------------------TAGATCATGAACTAATCGAATCCGAGGATCATGTGGAAGTTAATGGTATTACG
droVir3 scaffold_12958:822257-822448 + TG-AGA--GCGCAATGCTA-CAGATTTCGTTTTCGTTCTCAATTTTCA-AAAAATCAAGCTGCATAGTAGCATTTTGTTGTATGG-CGTTACTCATCTTA-GTGTTTTTATT-GTCTT--------TGGTGCTAC--TGG---TA-ATCTAAAGCGGCTTTTGGTTAATCATT-------------------------------TAGAACA----------ACAATT-----T-TTTAA---------------CATAAGCTTAACTGTCGA---TC-----------------------------------------------------------------------GA
droMoj3 scaffold_6540:32435147-32435248 - TA-TAC--ATATATATAAATCGATATCAGTTC------AT-----AAC-AAAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGC-----T-TTAAACTTAAATTAACTTAAAGAAGTTTAAATTT-------T------------------CAATGGATCTTTGCC------------------------------------TTTTT
droGri2 scaffold_15203:780531-780657 - AT-GCA----------------------------------------------------------------------------TACCAATTGTATATTTTGCTTC-TTTTATT-GTATATCAACTAATCTTAATATATA-----TATA----------------------------TATATATATTTATAT-----A-TGTATATATATGCG----------TAAATT-----T-TAATT---------------CTTTATATTGAGTATTTA---TT-----------------------------------------------------------------------AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AG-CGA--GCGGAAAGAGAGCAAATTTGGCCT------TC-----ACC-AAAAAAGTGGATGCATAGTGCCAAACCAATGTATGGCCGTTACGCATCTTG-TTA-TTTTAGT-GTCTT--------TGGTACTATACA-----TATA----------------------------TACAAAGCGTTATTC-----A-TTTGTACTAATAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGATTATGGA---TTAACTTTA-ACTTCTACCCAACAGACCATGAGCTTATTGAGTCCGAGGACCATGTGGAGGTCAATGGTATTACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........GCGGAAAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................2420201.7040340000000017000024361428000
........GCGGAAAGAGAGCAAATTTGGCC...............................................................................................................................................................................................................................................................................................................................232072.551451000000990304130010350000
........GCGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................252050.251005002570090400690000000
...............GAGAGCAAATTTGGCCT------TC-----ACC-AA...........................................................................................................................................................................................................................................................................................................242034.256850001684000000000000
........GCGGAAAGAGAGCAAATTTGG.................................................................................................................................................................................................................................................................................................................................212031.95639000000020000101536000
........GCGGAAAGAGAGCAAATTTGGC................................................................................................................................................................................................................................................................................................................................222024.404880000000010011200375000
...............GAGAGCAAATTTGGCCT------TC-----ACC-A............................................................................................................................................................................................................................................................................................................232023.204640000462000002000000
..............AGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................182016.203240000324000000000000
.............................................................................................CATCTTG-TTA-TTTTAGT-GTCTT--------TGGT............................................................................................................................................................................................................................26213.502700000076560030000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-.............................................................................................................................................................................................................................................................................................................232012.65253000014800000105000000
........GCGGAAAGAGAGCAAATTTGGCCT------TC-----.................................................................................................................................................................................................................................................................................................................26209.00180000000320112000279000
................................................................................................CTTG-TTA-TTTTAGT-GTCTT--------TGGT............................................................................................................................................................................................................................2328.001600010012240051000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AAA..........................................................................................................................................................................................................................................................................................................26207.901580000000000157001000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AA...........................................................................................................................................................................................................................................................................................................25207.301460000146000000000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-A............................................................................................................................................................................................................................................................................................................24207.1014200035000000107000000
.................................................................................................................................TACTATACA-----TATA----------------------------TACAAAGCGTTATT.................................................................................................................................................................2717.00700000033010000000
..................................................................................................................................ACTATACA-----TATA----------------------------TACAAAGCGTTATT.................................................................................................................................................................2617.00700000012220000000
.....................................................................................................................................................................................................................................................................................................................TTATTGAGTCCGAGGACCATGTGGA................2515.00500000021011000000
.........CGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................24204.559100000056150200000000
................................................................................................CTTG-TTA-TTTTAGT-GTCTT--------TGGTA...........................................................................................................................................................................................................................2414.00400000011000020000
.............................................................................................CATCTTG-TTA-TTTTAGT-GTCTT--------TGG.............................................................................................................................................................................................................................2534.001200000055200000000
......................................................................................................................................TACA-----TATA----------------------------TACAAAGCGTTATTC-----A-TT.......................................................................................................................................................2613.00300000001200000000
...............................................................................................................................................................................................................TAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGA.....................................................................................2713.00300000011010000000
.............................................................................................CATCTTG-TTA-TTTTAGT-GTCTT--------TGGTA...........................................................................................................................................................................................................................2713.00300000020100000000
..................................................................................................................................................................................................................................................................................................TACCCAACAGACCATGAGCTTATTGAG.................................2713.00300000010011000000
.........CGGAAAGAGAGCAAATTTGGCCT------TC-----.................................................................................................................................................................................................................................................................................................................25202.4048000000004530000000
........GCGGAAAGAGAGCAAATTTGGCA...............................................................................................................................................................................................................................................................................................................................23202.10420000000000001626000
........GCGGAAAGAGAGCAAATTTGGCCT------TC-----ACC-.............................................................................................................................................................................................................................................................................................................29202.10420000002511410001000
......................................................................................................................................................................................................................................................................................................................TATTGAGTCCGAGGACCATGTGGA................2412.00200000000101000000
....................................................................................................................................TATACA-----TATA----------------------------TACAAAGCGTTATT.................................................................................................................................................................2412.00200000010100000000
................................................................................................................................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCATGT...................2712.00200000000100010000
................................................................................................................................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCATG....................2612.00200000001000010000
...............................................................................................................................................................................................................TAGG----------CCAATC-----T-CTATA---------------CTCAAAATT.......................................................................................2512.00200000011000000000
................................................................................................................................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCA......................2412.00200000002000000000
.......................................................................................................................................................................................................................................................................GATTATGGA---TTAACTTTA-ACTTC............................................................2312.00200000010100000000
......................................................................................................................................................................................................................................................................................................................TATTGAGTCCGAGGACCATGTGGAGG..............2612.00200000000020000000
.............................................................................................................................................................................................................................................TA---------------CTCAAAATTGATTATGGA---TTAACTT....................................................................2712.00200000000200000000
..............AGAGAGCAAATTTGGC................................................................................................................................................................................................................................................................................................................................16201.2024000000000024000000
..............AGAGAGCAAATTTGGCCT------TC-----.................................................................................................................................................................................................................................................................................................................20201.1523000000000023000000
.............................................................................................................................................................................................C-----A-TTTGTACTAATAGG----------CCAATC-----T-CTA.................................................................................................................2611.00100000000100000000
................................................................................................CTTG-TTA-TTTTAGT-GTCTT--------TGGTACT.........................................................................................................................................................................................................................2611.00100000001000000000
...............................................................................................................................................................................................................TAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGATT...................................................................................2911.00100000000100000000
...............................................................................................................................................................................................................................AATC-----T-CTATA---------------CTCAAAATTGATTATGGA---...........................................................................2811.00100000010000000000
..............................................................................................................................TGGTACTATACA-----TATA----------------------------TACAAAGCGTTA...................................................................................................................................................................2811.00100000010000000000
...............................................................................................................................................................................................................TAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGAT....................................................................................2811.00100000000100000000
..............................................................................................................................................................................................................................................................................................................CATGAGCTTATTGAGTCCGAGGACCATG....................2811.00100000000000010000
.........................................................................................................................................................................................................................................................................................................CAGACCATGAGCTTATTGAGTCCGAG...........................2611.00100000000100000000
..........................................................................................................................................................................................ATTC-----A-TTTGTACTAATAGG----------CCAATC-----T-C...................................................................................................................2711.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................TGAGTCCGAGGACCATGTGGAGGTCAA..........2711.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................TCCGAGGACCATGTGGAGGTCAATGGT......2711.00100000000001000000
.........................................................................................................................................................................................................................................................................................TTA-ACTTCTACCCAACAGACCATGAGC.........................................2711.00100000000100000000
..................................................................................................................................................................................................................................................................................................TACCCAACAGACCATGAGCTTATTGA..................................2611.00100000000001000000
....................................................AAAGTGGATGCATAGTGCCAAACCAA................................................................................................................................................................................................................................................................................2611.00100000000001000000
........................................................................................................................................................................................................................................................................................................ACAGACCATGAGCTTATTGAGTCCGA............................2611.00100000000010000000
....................................................................................................................................TATACA-----TATA----------------------------TACAAAGCGTTATTC-----A-.........................................................................................................................................................2611.00100000000100000000
....................................................................................................................................................................................................................................................................ATTGATTATGGA---TTAACTTTA-ACTT.............................................................2511.00100000000010000000
...................................................................................................................................................................................................................................................................AATTGATTATGGA---TTAACTTTA-ACTTC............................................................2711.00100000010000000000
......................................................................................................................................................................................................TTGTACTAATAGG----------CCAATC-----T-CTA.................................................................................................................2311.00100000000100000000
................................................................................................................................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCAT.....................2511.00100000000010000000
....................................................................................................................................TATACA-----TATA----------------------------TACAAAGCGTTATTC-----A-T........................................................................................................................................................2711.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................TGAGTCCGAGGACCATGTGGAGGTC............2511.00100000000001000000
.......................ATTTGGCCT------TC-----ACC-AAAAAAGTGGA..................................................................................................................................................................................................................................................................................................2511.00100000001000000000
......................................................................................................................................................................................................................................................................................................................TATTGAGTCCGAGGACCATGTGGAGGTC............2811.00100000000001000000
......................................................................................................................................TACA-----TATA----------------------------TACAAAGCGTTATTC-----A-.........................................................................................................................................................2411.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................TCCGAGGACCATGTGGAGGT.............2011.00100010000000000000
................................................................................................................................................................................................................................................................................................................TGAGCTTATTGAGTCCGAGGACCATGTG..................2811.00100000000010000000
.................................................................................................................................TACTATACA-----TATA----------------------------TACAAAGCGTTAT..................................................................................................................................................................2611.00100000000100000000
......................................................................................................................................................................................................................................................................TGATTATGGA---TTAACTTTA-ACTTC............................................................2411.00100000000100000000
..........................................................................................................................................................................................................................................................................................TA-ACTTCTACCCAACAGACCATGAGCT........................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................TTGATTATGGA---TTAACTTTA-ACTTC............................................................2511.00100000000100000000
..............................................................................................ATCTTG-TTA-TTTTAGT-GTCTT--------TGGTA...........................................................................................................................................................................................................................2611.00100000000100000000
...............................................................................................................................................................................................................................................................................................TTCTACCCAACAGACCATGAGCTTAT.....................................2611.00100000000001000000
..............................................................................................................................TGGTACTATACA-----TATA----------------------------TACAAAGCGTT....................................................................................................................................................................2711.00100000010000000000
...........................................................................................................................................................................................................................................................................ATGGA---TTAACTTTA-ACTTCTACCCAACAG..................................................2911.00101000000000000000
.................................................................................................................................................................................................................................................................................................................GAGCTTATTGAGTCCGAGGAG........................2111.00100000001000000000
................................................................................................CTTG-TTA-TTTTAGT-GTCTT--------TGGTAC..........................................................................................................................................................................................................................2511.00100000000000010000
.........................................................................................................................................................................................................................................................................TTATGGA---TTAACTTTA-ACT..............................................................1911.00100000000100000000
.....................AAATTTGGCCT------TC-----ACC-AAAAAAGTGGA..................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.....................................................................................................................................................................................................................................................................TTGATTATGGA---TTAACTTTA-ACTTT............................................................2511.00100000001000000000
........................TTTGGCCT------TC-----ACC-AAAAAAGTGG...................................................................................................................................................................................................................................................................................................23200.8517000000150020000000
........GCGGAAAGAGAGCAAATTTGGCCT------TC-----AC...............................................................................................................................................................................................................................................................................................................28200.8016000000401200000000
........GCGGAAAGAGAGCAAATTTGGCCT------TA-----.................................................................................................................................................................................................................................................................................................................26200.7515000000102100110000
........GCGGAAAGAGAGCAAATTTGGCCT------C.......................................................................................................................................................................................................................................................................................................................25200.751500000030500070000
........GCGGAAAGAGAGCAAATTT...................................................................................................................................................................................................................................................................................................................................19200.7014000000000000113000
................................................................................................CTTG-TTA-TTTTAGT-GTCTT--------TGG.............................................................................................................................................................................................................................2230.67200000001000001000
.........CGGAAAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................23200.651300010001030080000
..............AGAGAGCAAATTTGG.................................................................................................................................................................................................................................................................................................................................15200.6012000000000012000000
............................................................................AATGTATGGCCGTTAC..................................................................................................................................................................................................................................................................16200.5010000000000010000000
........GCGGAAAGAGAGCAAATTTGGCCT------TC-----A................................................................................................................................................................................................................................................................................................................27200.501000000050300002000
...............................................................................................TCTTG-TTA-TTTTAGT-GTCTT--------TGGT............................................................................................................................................................................................................................2420.50100000000100000000
.....A--GCGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................26200.40800000002032010000
...................................................................TGCCAAACCAATGTATGGCCGTTACGCA...............................................................................................................................................................................................................................................................28200.40800010043000000000
...CGA--GCGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................28200.35700000022110010000
............AAAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................20200.30600000000006000000
.........CGGAAAGAGAGCAAATTTGGCCT------TC-----AC...............................................................................................................................................................................................................................................................................................................27200.30600100000500000000
.............................................................................ATGTATGGCCGTTACGCA...............................................................................................................................................................................................................................................................18200.30600000000006000000
AG-CGA--GCGGAAAGAGAGCAAATTTGGC................................................................................................................................................................................................................................................................................................................................27200.30600000001500000000
AG-CGA--GCGGAAAGAGAGCAAATTTG..................................................................................................................................................................................................................................................................................................................................25200.30600010000000041000
.........CGGAAAGAGAGCAAATTTGGCCT------TC-----A................................................................................................................................................................................................................................................................................................................26200.25500000000500000000
.....A--GCGGAAAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................25200.25500200000000030000
AG-CGA--GCGGAAAGAGAGCAAATTT...................................................................................................................................................................................................................................................................................................................................24200.25500000000100013000
.........................................................................................TACGCATCTTG-TTA-TTTTAGT-GTCTT--------................................................................................................................................................................................................................................2640.25100000000010000000
..........GGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................23200.20400000022000000000
........GCGGAAAGAGAGCAAATTTA..................................................................................................................................................................................................................................................................................................................................20200.20400000000000004000
..............................................................................TGTATGGCCGTTACGCAT..............................................................................................................................................................................................................................................................18200.20400000000004000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-T............................................................................................................................................................................................................................................................................................................24200.20400000000004000000
............................................................................................GCATCTTG-TTA-TTTTAGT-GTCTT--------T...............................................................................................................................................................................................................................2460.17100000000001000000
.............................................................................................CATCTTG-TTA-TTTTAGT-GTCTT--------TG..............................................................................................................................................................................................................................2460.17100000000001000000
............................................................................................GCATCTTG-TTA-TTTTAGT-GTC..........................................................................................................................................................................................................................................2160.17100000000001000000
...CGA--GCGGAAAGAGAGCAAATTTGGCC...............................................................................................................................................................................................................................................................................................................................26200.15300000000300000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AAAT.........................................................................................................................................................................................................................................................................................................27200.15300000000003000000
.....A--GCGGAAAGAGAGCAAATTTGG.................................................................................................................................................................................................................................................................................................................................22200.15300000000000003000
........GCGGAAAGAGAGCAAATTTGGCG...............................................................................................................................................................................................................................................................................................................................23200.15300000010000002000
................AGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................17200.15300000000003000000
AG-CGA--GCGGAAAGAGAGCAAATTTGGCC...............................................................................................................................................................................................................................................................................................................................28200.15300000000000030000
.........CGGAAAGAGAGCAAATTTGGCCT------TC-----ACC-.............................................................................................................................................................................................................................................................................................................28200.15300000000010020000
.......................................................................................................A-TTTTAGT-GTCTT--------TGGT............................................................................................................................................................................................................................1770.14100000000001000000
.............................................................................................CATCTTG-TTA-TTTTAGT-.............................................................................................................................................................................................................................................1770.14100000001000000000
.........................................................................ACCAATGTATGGCCGTTACG.................................................................................................................................................................................................................................................................20200.10200000000002000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AC...........................................................................................................................................................................................................................................................................................................25200.10200000000000002000
............AAAGAGAGCAAATTTGGC................................................................................................................................................................................................................................................................................................................................18200.10200000000002000000
..........GGAAAGAGAGCAAATTTGGCCT------TC-----ACC-.............................................................................................................................................................................................................................................................................................................27200.10200000000002000000
......................AATTTGGCCT------TC-----ACC-AAAAAAGTGG...................................................................................................................................................................................................................................................................................................25200.10200000002000000000
.............AAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
AG-CGA--GCGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................30200.10200000011000000000
..........GGAAAGAGAGCAAATTTGGCCT------TC-----.................................................................................................................................................................................................................................................................................................................24200.10200000002000000000
............AAAGAGAGCAAATTTGGCCT------TC-----ACC-.............................................................................................................................................................................................................................................................................................................25200.10200000000002000000
.....A--GCGGAAAGAGAGCAAATTTGGC................................................................................................................................................................................................................................................................................................................................23200.10200000000000002000
..........GGAAAGAGAGCAAATTTGG.................................................................................................................................................................................................................................................................................................................................19200.10200000000000002000
....GA--GCGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................27200.10200000000200000000
........GCGGAAAGAGAGCAAATTTGGCCT------TC-----ACC-A............................................................................................................................................................................................................................................................................................................30200.10200000020000000000
.....A--GCGGAAAGAGAGCAAATTTG..................................................................................................................................................................................................................................................................................................................................21200.10200000000000002000
........GCGGAAAGAGAGCAAATTTGT.................................................................................................................................................................................................................................................................................................................................21200.10200000000000020000
................................................................................................CTTG-TTA-TTTTAGT-GTCTT--------TGGTG...........................................................................................................................................................................................................................24200.10200000000000020000
............................................................TGCATAGTGCCAAACCAATGTATGGC........................................................................................................................................................................................................................................................................26200.10200000000010100000
.......................ATTTGGCCT------TC-----ACC-AAAAAAGTGG...................................................................................................................................................................................................................................................................................................24200.10200000020000000000
....GA--GCGGAAAGAGAGCAAATTTGGCC...............................................................................................................................................................................................................................................................................................................................25200.10200000000010010000
........GCGGAAAGAGAGCAAATTTGGCCC------........................................................................................................................................................................................................................................................................................................................24200.10200000020000000000
............AAAGAGAGCAAATTTGGCCT------TC-----.................................................................................................................................................................................................................................................................................................................22200.10200000000002000000
........GCGGAAAGAGAGCAAAT.....................................................................................................................................................................................................................................................................................................................................17200.10200000010001000000
.............................................................................................CATCTTG-TTA-TTTTAGT-GTCTT--------TGGA............................................................................................................................................................................................................................26100.10100000000000010000
.......................................................................................................A-TTTTAGT-GTCTT--------TG..............................................................................................................................................................................................................................15160.06100000000001000000
..........GGAAAGAGAGCAAATTTGGCCT------TC-----ACA-.............................................................................................................................................................................................................................................................................................................27200.05100000000010000000
............................................................................AATGTATGGCCGTTA...................................................................................................................................................................................................................................................................15200.05100000000001000000
............AAAGAGAGCAAATTTGGCCT------TC-----AC...............................................................................................................................................................................................................................................................................................................24200.05100000000000010000
.................GAGCAAATTTGGCCT------TC-----ACC-AA...........................................................................................................................................................................................................................................................................................................22200.05100000000001000000
..........................TGGCCT------TC-----ACC-AAAAAAGTGG...................................................................................................................................................................................................................................................................................................21200.05100000000100000000
.........................TTGGCCT------TC-----ACC-AAAAAAGTGG...................................................................................................................................................................................................................................................................................................22200.05100000001000000000
........GCGGAAAGAGAGCAAATTTGGCCC------C.......................................................................................................................................................................................................................................................................................................................25200.05100000000000010000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AAAA.........................................................................................................................................................................................................................................................................................................27200.05100010000000000000
.G-CGA--GCGGAAAGAGAGCAAA......................................................................................................................................................................................................................................................................................................................................20200.05100000000100000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AAC..........................................................................................................................................................................................................................................................................................................26200.05100000000001000000
..........GGAAAGAGAGCAAATTTG..................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
...........GAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
........GCGGAAAGAGAGCAAATTTGGCCT------TC-----AT...............................................................................................................................................................................................................................................................................................................28200.05100000000000001000
..........GGAAAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................22200.05100000000000010000
.........CGGAAAGAGAGCAAATTTG..................................................................................................................................................................................................................................................................................................................................19200.05100000000010000000
.........CGGAAAGAGAGCAAATTTGGCCT------TG-----.................................................................................................................................................................................................................................................................................................................25200.05100000000000001000
AG-CGA--GCGGAAAGAGAGCAAAT.....................................................................................................................................................................................................................................................................................................................................22200.05100000000000010000
.............AAGAGAGCAAATTTGGCCT------TC-----ACC-AAA..........................................................................................................................................................................................................................................................................................................27200.05100010000000000000
....GA--GCGGAAAGAGAGCAAATTTGGC................................................................................................................................................................................................................................................................................................................................24200.05100000000100000000
.............................................................................ATGTATGGCCGTTACGCATCTTG-TTA-.....................................................................................................................................................................................................................................................26200.05100000001000000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-AAAAGC.......................................................................................................................................................................................................................................................................................................29200.05100000000001000000
...CGA--GCGGAAAGAGAGCAAATTTGGCCT------........................................................................................................................................................................................................................................................................................................................27200.05100000000100000000
............................................................TGCATAGTGCCAAACCAATGTATGGCC.......................................................................................................................................................................................................................................................................27200.05100000000001000000
.G-CGA--GCGGAAAGAGAGCAAATTTGGCCT------T.......................................................................................................................................................................................................................................................................................................................29200.05100000001000000000
..............AGAGAGCAAATTTGGCCT------TC-----ACC-ATT..........................................................................................................................................................................................................................................................................................................26200.05100010000000000000
...........GAAAGAGAGCAAATTTGGCCT------TC-----ACC-.............................................................................................................................................................................................................................................................................................................26200.05100010000000000000
............AAAGAGAGCAAATTTGGCCT------TC-----ACC-A............................................................................................................................................................................................................................................................................................................26200.05100000000001000000
.....................AAATTTGGCCT------TC-----ACC-AAAAAAGT.....................................................................................................................................................................................................................................................................................................24200.05100000000001000000
..........GGAAAGAGAGCAAATTTGGCCT------TC-----A................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
droSec2
AG-CGA--GCGGAAAGACAGCAAATTTGGCCT------TC-----ACC-AAAAAAGTGGATGCATAGTGCCAAACCAATGTATGGCCGTTACACATCTTG-TTA-TTTTAGT-GTCTT--------TGGTACTATACA-----TATA----------------------------TACAAAGCGTTATTC-----A-TTTGTACTAATAGG----------CCAATC-----T-CTATA---------------CTCAAAATTGATTATGGA---TTAACTTTA-ACTTCTACCCAACAGACCATGAGCTTATTGAGTCCGAGGACCATGTGGAGGTCAATGGTATTACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................TCCGAGGACCATGTGGAGGTC............2111.0010100
............................................................................................ACATCTTG-TTA-TTTTAGT-GTCTT--------TGG.............................................................................................................................................................................................................................2620.5011000
............................................................................................ACATCTTG-TTA-TTTTAGT-GTCTT--------TG..............................................................................................................................................................................................................................2520.5011000
.............................................................................................CATCTTG-TTA-TTTTAGT-GTCTT--------TGGT............................................................................................................................................................................................................................2650.2011000
dm3
AG-CGA--GCGGAAAGAGAGCAATTTTGGCCG------TC-----ACC-AAAAAAGTGGCTGCATAGTGCCAAACCAATGTATGGCCGTTACGCATCTTG-TTA-TTCTAGT-GTCTT--------TGGTTCATC--CC-TCC---AT----------------------------GCAATGTTTCCGTATGAGCATTTTTTATTAATAAG----------CTTGTTACGTGG-CATTT---------------TTCTAAAATGATT--GGATGTTTAA----------------------------------------------------------CATTAAATTCTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........GCGGAAAGAGAGCAATTTTGGCC...............................................................................................................................................................................................................................................................................................................................232015.5531100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000002740000000000000000000000007
.............................................................................................CATCTTG-TTA-TTCTAGT-GTCTT--------TG..............................................................................................................................................................................................................................242015.403080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000002570000000046000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCGGAAAGAGAGCAATTTTGGC................................................................................................................................................................................................................................................................................................................................222010.5521100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061027000000001190000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................CATCTTG-TTA-TTCTAGT-GTCTT--------TGGTT...........................................................................................................................................................................................................................27209.201840000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000100000005000000000000000000000000000000000000000000000000000000000000000000000000000410001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTCTAAAATGATT--GGATGTTTAA----------------------------------------------------------CAT..........26209.05181000000000000000000000000000000000000009018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000590000000000000000000000000000000000000000000000000000001900000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000005600000000000000000000000000
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...........GAAAGAGAGCAATTTTGGCCG------TC-----ACC-AAA..........................................................................................................................................................................................................................................................................................................29200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ATTT---------------TTCTAAAATGATT--GGATGTTTAA----------------------------------------------------------.............27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................T---------------TTCTAAAATGATT--GGATGTTT.........................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TAAAATGATT--GGATGTTTAA----------------------------------------------------------CATTAA.......26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ATTT---------------TTCTAAAATGATT--GGATGTT..........................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTCTAAAATGATT--GGATGTT..........................................................................20200.1530000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................C-----ACC-AAAAAAGTGGCTGCATAG...........................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TA-TTCTAGT-GTCTT--------TGGT............................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....GA--GCGGAAAGAGAGCAATTTTGGCC...............................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................GTATGAGCATTTTTTATTAATAAG----------CTTG.............................................................................................................................28140.1420000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CGTATGAGCATTTTTTATTAATAA............................................................................................................................................24140.1420000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CGTATGAGCATTTTTTATTA................................................................................................................................................20150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TCCGTATGAGCATTTTTTATT.................................................................................................................................................21150.1320000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CCGTATGAGCATTTTTTATT.................................................................................................................................................20150.1320000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TCTAAAATGATT--GGATGTTTAA----------------------------------------------------------CATTAA.......28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GGATGTTTAA----------------------------------------------------------CATTAAATTCTGC23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GG-CATTT---------------TTCTAAAATGATT--GGATGTT..........................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAATGATT--GGATGTTTAA----------------------------------------------------------CA...........20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TATGAGCATTTTTTATTAAT..............................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.................................................................................................TTG-TTA-TTCTAGT-GTCTT--------TGGTTCA.........................................................................................................................................................................................................................25100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TA-TTCTAGT-GTCTT--------TGGTTC..........................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GA--GCGGAAAGAGAGCAATTTTGG.................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...CGA--GCGGAAAGAGAGCAATTTTGGCCG------........................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................TGG-CATTT---------------TTCTAAAATGATT--GGATG............................................................................26200.1020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TT---------------TTCTAAAATGATT--GGATG............................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................TT---------------TTCTAAAATGATT--GGATGA...........................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CCAATGTATGGCCGTTACGCA...............................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000
............AAAGAGAGCAATTTTGGCCG------TC-----ACC-AA...........................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
................................................................................................CTTG-TTA-TTCTAGT-GTCTT--------TG..............................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TAAAATGATT--GGATGTTTAA----------------------------------------------------------CATTAAAA.....28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TG-CGA--GCGGGAAGAGAGCAATTACTGCCG------CC-----ACCAAAAAAAGTGGCTGCATAGTGCAAAACCAATGTATGGCCGTCACGCATCTTA-TTA-TTCTAGT-GTCTT--------TGTTCTTAC--TA-CCG-ATT----------------------------TATGAAATTAAATAT-----T-TTTGTAAAACCTTT----------TTAGTC-----T-TTAAA---------------CC--------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GG-CGA--GCGAAAAGAGAGCAATTTTGGTCG------TC-----ACC-AAAAAAGTGGCTGCATAGTGCAAAGCCAATGTATGGCCGTTACGCATCTTG-TTA-TTATAAT-GTCTT--------TGGTCTTAC--AC-TAT-G--C----------------AAAATCATTTAAATAAAGTG-----------------TATTTATATTTATTACTCGTAGAATA-----TACTA-------------------------------------------------------------------------------------------------------------TACTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....A--GCGAAAAGAGAGCAATTTTGGTCG------........................................................................................................................................................................................................................................................................................................................25202.10420273100110000
...........AAAAGAGAGCAATTTTGGTCG------TC-----ACC-.............................................................................................................................................................................................................................................................................................................26201.2024022200000000
..................................................................................................TG-TTA-TTATAAT-GTCTT--------TGGTCTTA........................................................................................................................................................................................................................2511.00101000000000
............................................................TGCATAGTGCAAAGCCAATGTATG..........................................................................................................................................................................................................................................................................2430.33101000000000
.............................................................GCATAGTGCAAAGCCAATGTATGGC........................................................................................................................................................................................................................................................................2530.33100100000000
............................................................TGCATAGTGCAAAGCCAATGTATGGCCGT.....................................................................................................................................................................................................................................................................2930.33100100000000
.............................................................GCATAGTGCAAAGCCAATGTA............................................................................................................................................................................................................................................................................2130.33101000000000
........................................................................AGCCAATGTATGGCCGTTACGCATCT............................................................................................................................................................................................................................................................2640.25100100000000
.....A--GCGAAAAGAGAGCAATTTTGGTC...............................................................................................................................................................................................................................................................................................................................24200.20403010000000
...........AAAAGAGAGCAATTTTGGTCG------TC-----AC...............................................................................................................................................................................................................................................................................................................25200.15300300000000
.....A--GCGAAAAGAGAGCAATTTTGGT................................................................................................................................................................................................................................................................................................................................23200.15303000000000
...........AAAAGAGAGCAATTTTGGTCG------TC-----ACC-AAA..........................................................................................................................................................................................................................................................................................................29200.10200200000000
.....A--GCGAAAAGAGAGCAATTTTGGTCG------T.......................................................................................................................................................................................................................................................................................................................26200.10200200000000
.............................................................................................CATCTTG-TTA-TTATAAT-GTCTT--------TGG.............................................................................................................................................................................................................................25180.06101000000000
.............AAGAGAGCAATTTTGGTCG------TC-----AC...............................................................................................................................................................................................................................................................................................................23200.05101000000000
...........AAAAGAGAGCAATTTTGGTCG------C.......................................................................................................................................................................................................................................................................................................................22200.05100100000000
............................................................................AATGTATGGCCGTTACGCATCTTG-T........................................................................................................................................................................................................................................................25200.05101000000000
...................GCAATTTTGGTCG------TC-----ACC-AA...........................................................................................................................................................................................................................................................................................................20200.05100000010000
GG-CGA--GCGAAAAGAGAGCAATTTTG..................................................................................................................................................................................................................................................................................................................................25200.05100100000000
.....A--GCGAAAAGAGAGCAATTTTGGTCG------TC-----T................................................................................................................................................................................................................................................................................................................28200.05100000010000
...........AAAAGAGAGCAATTTTGGTCG------TC-----A................................................................................................................................................................................................................................................................................................................24200.05100100000000
..............AGAGAGCAATTTTGGTCG------TC-----ACC-AAA..........................................................................................................................................................................................................................................................................................................26200.05100100000000
...........AAAAGAGAGCAATTTTGGTCG------TC-----.................................................................................................................................................................................................................................................................................................................23200.05101000000000
droEug1
TA-ATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-TTTTCTACGTAACAGATCACGAGTTAATCGAATCCGAGGACCATGTGGAGGTCAATGGTACCACCSizeHit CountTotal NormTotal
No Reads
droBia1
TG-CGA--GCGGAGAAAGCGAGATTTTCGTCT------CC-----ACC-AAAAAATGAGCTGCATATAGCAAAACGAACGCATGGTCGTTACTCATCTTA-GACATTATATTGGTCTT--------TGGTCAGAG--TA-ACT-A--T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTTTTGCASizeHit CountTotal NormTotal
No Reads
droTak1
AG-CGA--GCGGAAAGAGCGAAATTTTCGTCA------CC-----ACC-AAAAATCAGGCTGGATATTGCAAAACGAATGTATGGCCGTTACTCATCTTA-GAGATTATATTGGTCTT--------TACTTTTAC--CC-TAT-A--C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TA-ATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-ATTTCTATCCGCCAGATCATGAGCTTATCGAATCGGAGGACCATGTTGAGGTCAATGGTATCACCSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCGA--GCGGAGAGAGCGGAATTTTCGTCG------CC-----ACC-AAAAAACGAGCTGCATATTGCAAAACCAATGTATGGGCGTTACGCATCTTA-GTGATTATATTGGTCTT--------TGGTAATAC--TTA---TAA-C---------------------------AACCTTTATCATCTA-----A-TTTGCATTTCCACT----------TCTATC-----C-CGTTA---------------TTAA---------------------------------------------------------------------------AAACTAATATTTTAACTSizeHit CountTotal NormTotal
No Reads
droFic1
AT-CCGAAGCGTAAGTACTGATACTCCAGCCA------CC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA---------------ACCA--ATTGCTAACTCG---CCAATTTGA-CTTTCCACCC-TCAGATCACGAGCTGATCGAGTCCGAGGATCATGTGGAGGTCAACGGCATCACCSizeHit CountTotal NormTotal
No Reads
droKik1
AG-AAC--GCG-----------ATTGTCGTTG------CC-----ACC-AAAAATGCAGCCTCATATTGCAAAACGAATGTATGCTCGTGAGGCATCTTG-TTAAATCTATT-GTCTT--------TGGTACAAC--TG-TAT-A--T------------------------------AACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTASizeHit CountTotal NormTotal
No Reads
droAna3
GA-TTG--ACTTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCTCTCATCC-GCAGATCATGAACTTATCGAGTCCGAGGACCATGTCGAAGTCAATGGCATCACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................TATCGAGTCCGAGGACCATGTCGAAGT.............2711.001100000
..........................................................................................................................................................................................................................................................................................................................GAGTCCGAGGACCATGTCGAAGTCAAT.........2711.001100000
................................................................................................................................................................................................................................................................................................................................GAGGACCATGTCGAAGTCAATGGC......2411.001001000
droBip1
AC-TAA--CTTGAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCCCACCC-ACAGATCATGAGCTCATCGAGTCAGAGGACCATGTCGAGGTCAATGGAATTACCSizeHit CountTotal NormTotal
No Reads
dp5
TG-CGA--GCGATA---GTGCAGATTTCGTCT--G---TT-----CCC-AAAAACGTCGCTGCATATGACCATTGAAATGTAAAGGCATTACTCATCTTA-CTATTAATATT-GTCTT--------TGATTATAC--CT-TGT-A--T-----------------------------CAACGAATTGGTA-----A-TTT----------------------------------------------------------------------------------------------------------------------------------------------------GTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
C----------------------------------------------C-AAACACCTCGCTGCATATGACCATTGAAATGTATGGTCGTTACTCATCTAG-CTATTTATATT-GTCTT--------TGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AT-CCAAAACGTAAGTCCTGCGA------------------------------------------ACTAGCCCATATATGTAGAG-AATAACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAAATTGATTT-----------------------------TAGATCATGAACTAATCGAATCCGAGGATCATGTGGAAGTTAATGGTATTACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................CATGAACTAATCGAATCCGAGGAT........................2411.00100001
droVir3
TG-AGA--GCGCAATGCTA-CAGATTTCGTTTTCGTTCTCAATTTTCA-AAAAATCAAGCTGCATAGTAGCATTTTGTTGTATGG-CGTTACTCATCTTA-GTGTTTTTATT-GTCTT--------TGGTGCTAC--TGG---TA-ATCTAAAGCGGCTTTTGGTTAATCATT-------------------------------TAGAACA----------ACAATT-----T-TTTAA---------------CATAAGCTTAACTGTCGA---TC-----------------------------------------------------------------------GASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................TTCGTTCTCAATTTTCA-AAAAATCAAGC..................................................................................................................................................................................................................................................................................................282018.903780000000000000000000000000002050000000017300000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGGT............................................................................................................................................................................................................................2328.5017000000000000000000001000000015180000000100000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAATT..................................................................................................................................................................................................................................................................................................................26206.6013210000000000000000000000013100000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................25206.4512900004010000000000000000000124000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAATTT.................................................................................................................................................................................................................................................................................................................27204.55910000000000004200000020030000000080000000000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGG.............................................................................................................................................................................................................................2234.3313000001000000000000000000000040140100000200000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTC......................................................................................................................................................................................................................................................................................................................22203.90780015015000000000000000000032000160000000000000000000000000000000000
.....................................................ATCAAGCTGCATAGTAGCATTTTGT................................................................................................................................................................................................................................................................................25203.3567000000400000000000000000161290500000000000000000000000000000000012
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGGTGC..........................................................................................................................................................................................................................2512.002001000000000000000000000100000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAATTTT................................................................................................................................................................................................................................................................................................................28201.903800500000000000000000000022000000000011000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTTGTT...............................................................................................................................................................................................................................................................................25201.60320000000000000000000000002700050000000000000000000000000000000000
............................................................TGCATAGTAGCATTTTGTTGTATGG-CG......................................................................................................................................................................................................................................................................27201.10220010000000000000000000000001400050000200000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTTG.................................................................................................................................................................................................................................................................................23201.05210000000000000000000000001800000003000000000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGGTGCTA........................................................................................................................................................................................................................2711.001000000000000000000000000000000000001000000000000000000000000000
...............................TTCGTTCTCAATTTTCA-AAAAATCAAGCT.................................................................................................................................................................................................................................................................................................29201.00200000000000000000000000000401200040000000000000000000000000000000
...............................................................................................TCTTA-GTGTTTTTATT-GTCTT--------TGGTGC..........................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..............................................................CATAGTAGCATTTTGTTGTATGG-C.......................................................................................................................................................................................................................................................................24200.95190000000000000000000000000130005000000010000000000000000000000000
..........................TCGTTTTCGTTCTCAATTTTCA-AAAAA........................................................................................................................................................................................................................................................................................................27200.8016000000000000000000000000000708000000010000000000000000000000000
................CTA-CAGATTTCGTTTTCGTTCTCAA....................................................................................................................................................................................................................................................................................................................25200.6513000100000000000000000000108030000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTC........................................................................................................................................................................................................................................................................................................................20200.65130000000000000000000000000000200000000001000000000000000000001000
.........................TTCGTTTTCGTTCTCAATTTTCA-AAA..........................................................................................................................................................................................................................................................................................................26200.6012000000000000000000000000000050000007000000000000000000000000000
.....................................................ATCAAGCTGCATAGTAGCATTTTGTTG..............................................................................................................................................................................................................................................................................27200.5010001000000000000000000000008000100000000000000000000000000000000
..........................TCGTTTTCGTTCTCAATTTTCA-AAAAAT.......................................................................................................................................................................................................................................................................................................28200.5010000000000000000000000000000000000090010000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGGA............................................................................................................................................................................................................................2360.503000000000000000000000000000000030000000000000000000000000000000
...............................TTCGTTCTCAATTTTCA-AAAAATCAA....................................................................................................................................................................................................................................................................................................26200.5010000000000000000000000000190000000000000000000000000000000000000
................................................................................................CTTA-GTGTTTTTATT-GTCTT--------TG..............................................................................................................................................................................................................................2240.502000000000000000000000000000020000000000000000000000000000000000
...........................................................CTGCATAGTAGCATTTTGTTGTATGG-........................................................................................................................................................................................................................................................................26200.459000000100000000000000000010020100000004000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTTGTC...............................................................................................................................................................................................................................................................................25200.459000030000000000000000000500001000000000000000000000000000000000
..............................................................CATAGTAGCATTTTGTTGTATGG-........................................................................................................................................................................................................................................................................23200.459000000000000000000000002200003000010001000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAA....................................................................................................................................................................................................................................................................................................................24200.408000000000001600000000000000001000000000000000000000000000000000
............................................TTCA-AAAAATCAAGCTGCATAGTAG........................................................................................................................................................................................................................................................................................25200.357001000000000000000001000100030000010000000000000000000000000000
....................CAGATTTCGTTTTCGTTCTCAATTT.................................................................................................................................................................................................................................................................................................................25200.357000000000000000000000000200130000010000000000000000000000000000
...............................TTCGTTCTCAATTTTCA-AAAAATCA.....................................................................................................................................................................................................................................................................................................25200.357000000000000000000000000000000000020500000000000000000000000000
..............................................................CATAGTAGCATTTTGTTGTATGG-CGT.....................................................................................................................................................................................................................................................................26200.357000000000000000000000000060001000000000000000000000000000000000
..................................................................................................TA-GTGTTTTTATT-GTCTT--------TGG.............................................................................................................................................................................................................................2130.331000000000000000000000000000001000000000000000000000000000000000
............................................................TGCATAGTAGCATTTTGTTGTATGG-CGT.....................................................................................................................................................................................................................................................................28200.306000000000000000000000000030300000000000000000000000000000000000
....................CAGATTTCGTTTTCGTTCTCAATT..................................................................................................................................................................................................................................................................................................................24200.306000000000000000000000000103000011000000000000000000000000000000
..................A-CAGATTTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................24200.306004000000000000000000000002000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCT.......................................................................................................................................................................................................................................................................................................................21200.306000040000000100000000000000000000000000000000000000000000000001
..........................................TTTTCA-AAAAATCAAGCTGCATAGTAG........................................................................................................................................................................................................................................................................................27200.255000000100000000000000000000000100030000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAT....................................................................................................................................................................................................................................................................................................................24200.255000000000000000000000000500000000000000000000000000000000000000
..............TGCTA-CAGATTTCGTTTTCGTTCTCA.....................................................................................................................................................................................................................................................................................................................26200.255000000000000000000000000000011001000200000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TG..............................................................................................................................................................................................................................2140.251000000000000000000000000000000000000000100000000000000000000000
........................TTTCGTTTTCGTTCTCAATTTTCA-AAAA.........................................................................................................................................................................................................................................................................................................28200.255000000000000000000000000000000003002000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTTCA-AA...........................................................................................................................................................................................................................................................................................................25200.255000000200000000000000000000000003000000000000000000000000000000
..........................TCGTTTTCGTTCTCAATTTTCA-AAAA.........................................................................................................................................................................................................................................................................................................26200.255000000000000000000000000005000000000000000000000000000000000000
.............................................TCA-AAAAATCAAGCTGCATAGTAGCAT.....................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000020000000020000000000000000000000000
.............................................................GCATAGTAGCATTTTGTTGTATGG-C.......................................................................................................................................................................................................................................................................25200.204000000000000000000000000011000000020000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTTCA-AAAAA........................................................................................................................................................................................................................................................................................................28200.204000000000000000000000000000040000000000000000000000000000000000
...............................TTCGTTCTCAATTTTCA-AAAAATCAAG...................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000000000040000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTTCA-.............................................................................................................................................................................................................................................................................................................23200.204000000000000000000000000004000000000000000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGGTC...........................................................................................................................................................................................................................24200.204000000000000000000000000000000130000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCA.....................................................................................................................................................................................................................................................................................................................23200.204000000000000000000000010000000000300000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTT.........................................................................................................................................................................................................................................................................................................................19200.204000000000000100000000000000000003000000000000000000000000000000
..............................................................................TGTATGG-CGTTACTCATCTTA-.........................................................................................................................................................................................................................................................21200.204000000200000000000200000000000000000000000000000000000000000000
..................................................................................................TA-GTGTTTTTATT-GTCTT--------................................................................................................................................................................................................................................1860.171001000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCT.........................................................................................................................................................................................................................................1860.171000000000000000000000000000000100000000000000000000000000000000
....................................................AATCAAGCTGCATAGTAGCATTTTG.................................................................................................................................................................................................................................................................................25200.153001000000000000000000000000000002000000000000000000000000000000
..................A-CAGATTTCGTTTTCGTTCTCAATTT.................................................................................................................................................................................................................................................................................................................26200.153000100000000000000000000200000000000000000000000000000000000000
.........................TTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................18200.153000000000000000000000000300000000000000000000000000000000000000
..............................................................CATAGTAGCATTTTGTTGTATGG-CG......................................................................................................................................................................................................................................................................25200.153000000000000000000000000100000000002000000000000000000000000000
........................................................AAGCTGCATAGTAGCATTTTGT................................................................................................................................................................................................................................................................................22200.153000000000000000000000000000120000000000000000000000000000000000
.............................................TCA-AAAAATCAAGCTGCATAGTAGCATT....................................................................................................................................................................................................................................................................................28200.153000000000000000000000000000000002001000000000000000000000000000
.G-AGA--GCGCAATGCTA-CAGATTTCGTT...............................................................................................................................................................................................................................................................................................................................26200.102000000000000100000000000000000010000000000000000000000000000000
................................................................TAGTAGCATTTTGTTGTATGG-CGTTACT.................................................................................................................................................................................................................................................................28200.102000000000000000000000000020000000000000000000000000000000000000
...........................................................CTGCATAGTAGCATTTTGTTGTATGG-C.......................................................................................................................................................................................................................................................................27200.102000000000000000000000000000010001000000000000000000000000000000
...AGA--GCGCAATGCTA-CAGATTTCGTTT..............................................................................................................................................................................................................................................................................................................................26200.102000000000000000000001000000000000100000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTT................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000000002000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTTGTTGT.............................................................................................................................................................................................................................................................................27200.102000100000000000000000001000000000000000000000000000000000000000
...........................................TTTCA-AAAAATCAAGCTGCATAGTAG........................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000001001000000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATT..................................................................................................................................................................................................................................................................................................................19200.102000020000000000000000000000000000000000000000000000000000000000
........................................................................TTTTGTTGTATGG-CGTTA...................................................................................................................................................................................................................................................................18200.102000000000000000000000000001100000000000000000000000000000000000
............................................TTCA-AAAAATCAAGCTGCATAGTAGCAT.....................................................................................................................................................................................................................................................................................28200.102000000000000000000000000000100100000000000000000000000000000000
...................................................................TAGCATTTTGTTGTATGG-CGTTAC..................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000020000000000000000000000000000000
..........................................................GCTGCATAGTAGCATTTTGTTGTATGG-CG......................................................................................................................................................................................................................................................................29200.102000000000000000000000000002000000000000000000000000000000000000
....................CAGATTTCGTTTTCGTTCTCA.....................................................................................................................................................................................................................................................................................................................21200.102000000000020000000000000000000000000000000000000000000000000000
............................................................TGCATAGTAGCATTTTGTTGTATG..........................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000000000200000000000000000000000000
...................................................................TAGCATTTTGTTGTATGG-CGTT....................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000020000000000000000000000000000000
..............................TTTCGTTCTCAATTTTCA-AAAAATCA.....................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000010100000000000000000000000000
.......................................CAATTTTCA-AAAAATCAAGCTGCATAG...........................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000002000000000000000000000000000000000
................................TCGTTCTCAATTTTCA-AAAAATCAAGC..................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000020000000000000000000000000000000
..............................TTTCGTTCTCAATTTTCA-AAAAA........................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000200000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGT..........................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000000200000000000000000000000000000
...................................TTCTCAATTTTCA-AAAAATCAAGCTGC...............................................................................................................................................................................................................................................................................................27200.102000000000000000000000000020000000000000000000000000000000000000
.....................AGATTTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000000000002000000000000000000000000
........................TTTCGTTTTCGTTCTCAATTTTCA-AAA..........................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000200000000000000000000000000000000000000
........................TTTCGTTTTCGTTCTCAATTTTCA-AA...........................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000002000000000000000000000000000000000000
.....................AGATTTCGTTTTCGTTCTCAATTT.................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000001000010000000000000000000000000000000
........................................................AAGCTGCATAGTAGCATTTTGTTGT.............................................................................................................................................................................................................................................................................25200.102000000000000000000000000001000010000000000000000000000000000000
............................................................TGCATAGTAGCATTTTGTTGTATGG-CC......................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000020000000000000000000000000000000
..........................................................GCTGCATAGTAGCATTTTGTTGTATGG-........................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000001001000000000000000000000000000
.............................................................GCATAGTAGCATTTTGTTGTATGG-CG......................................................................................................................................................................................................................................................................26200.102000000000000000000000000000002000000000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTT..................................................................................................................................................................................................................................................................................22200.102001000000000000000000000001000000000000000000000000000000000000
..................A-CAGATTTCGTTTTCGTTCTCAATT..................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000200000000000000000000000000000000000000
.............................................TCA-AAAAATCAAGCTGCATAG...........................................................................................................................................................................................................................................................................................21200.102001000000000000000000000000000000000001000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTTGT................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000000100000100000000000000000000000
..........................................................GCTGCATAGTAGCATTTTGTTGTA............................................................................................................................................................................................................................................................................24200.102000000000000000000000000000200000000000000000000000000000000000
....................................TCTCAATTTTCA-AAAAATCAAGCTGC...............................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTTCA-AAAA.........................................................................................................................................................................................................................................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
...............................................A-AAAAATCAAGCTGCATAGTAGCATTT...................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000100000000000000000000000000000000000
.......................................CAATTTTCA-AAAAATCAAGCTGC...............................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
........GCGCAATGCTA-CAGATTTCGTTTTCG...........................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
................CTA-CAGATTTCGTTTTCGTTCTCA.....................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
..........................TCGTTTTCGTTCTCAATTTT................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
..................A-CAGATTTCGTTTTCGTTCTCAATTTT................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000001000000000000000000000000000000000000000
....................................................AATCAAGCTGCATAGTAGCATTTT..................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
...............................................A-AAAAATCAAGCTGCATAGTAGCAT.....................................................................................................................................................................................................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
....................................TCTCAATTTTCA-AAAAATCAAGCTGCA..............................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTTC...............................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000010000000000000000000000000
...............................TTCGTTCTCAATTTTCA-AAAA.........................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.............................................................GCATAGTAGCATTTTGTTG..............................................................................................................................................................................................................................................................................19200.051000000100000000000000000000000000000000000000000000000000000000
..................................................................GTAGCATTTTGTTGTATGG-CGTTACTCATC.............................................................................................................................................................................................................................................................30200.051000000000000000000000000000000000000000000000000000000000000001
......................................TCAATTTTCA-AAAAATCAAGCTGC...............................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
....................................................AATCAAGCTGCATAGTAGCATTTTGTC...............................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................................ATGG-CGTTACTCATCTTA-GTG......................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................................................AATCAAGCTGCATAGTAGCATTTTGTT...............................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
........................TTTCGTTTTCGTTCTCAATT..................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.................................CGTTCTCAATTTTCA-AAAAATCAAGCT.................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
...............................................................ATAGTAGCATTTTGTTGTATG..........................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................GCTGCATAGTAGCATTTTGTTGTATGG-C.......................................................................................................................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
.G-AGA--GCGCAATGCTA-CAGATTTCGTTT..............................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000010
...........................................................CTGCATAGTAGCATTTTGTTGTAT...........................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
.............................................TCA-AAAAATCAAGCTGCATAGTAGC.......................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
................................................................TAGTAGCATTTTGTTGTATGG-CG......................................................................................................................................................................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
...................................TTCTCAATTTTCA-AAAAATCAAGCTGCA..............................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................CTGCATAGTAGCATTTTGTTG..............................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................CTGCATAGTAGCATTTTGTTGTA............................................................................................................................................................................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
....................................................AATCAAGCTGCATAGTAGCATTTTGT................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
....................CAGATTTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
................................................................TAGTAGCATTTTGTTGTATGG-CGTT....................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
..................A-CAGATTTCGTTTTCGTTC........................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000100000000000000000000000
............................................................TGCATAGTAGCATTTTGTTG..............................................................................................................................................................................................................................................................................20200.051000000000000000000000001000000000000000000000000000000000000000
..........................TCGTTTTCGTTCTCAATTTTC...............................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TTT.............................................................................................................................................................................................................................22200.051000000010000000000000000000000000000000000000000000000000000000
..........................TCGTTTTCGTTCTCAATTT.................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000010000000000000000000000000000000000000
.........CGCAATGCTA-CAGATTTCGTTTTCGT..........................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTTTGACC..............................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAATTTA................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
........................................................AAGCTGCATAGTAGCATTTTGTTGTAT...........................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
................................................................TAGTAGCATTTTGTTGTATGG-CGTTA...................................................................................................................................................................................................................................................................26200.051000000000000000000001000000000000000000000000000000000000000000
..............TGCTA-CAGATTTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
.............................TTTTCGTTCTCAATTTTCA-AAAAATCA.....................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................ATCAAGCTGCATAGTAGCATTTTGTT...............................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000001000000000000000000000000
.......................ATTTCGTTTTCGTTCTCAATT..................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................CATAGTAGCATTTTGTTGT.............................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.....................AGATTTCGTTTTCGTTCTCA.....................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................ATCAAGCTGCATAGTAGCATTTTGTC...............................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000000000000000000000000000001
.......................................................CAAGCTGCATAGTAGCATTTTGTTG..............................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
......................................TCAATTTTCA-AAAAATCAAGCTGCA..............................................................................................................................................................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
..........................TCGTTTTCGTTCTCAATTTTCA-AAA..........................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
................CTA-CAGATTTCGTTTTCGTTCTCAATTTT................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000001000000000000000000000000000
..............................................CA-AAAAATCAAGCTGCATAGTAGC.......................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000001000000000000000000000000000
................CTA-CAGATTTCGTTTTCGTTC........................................................................................................................................................................................................................................................................................................................21200.051100000000000000000000000000000000000000000000000000000000000000
............................................TTCA-AAAAATCAAGCTGCATAGTAGC.......................................................................................................................................................................................................................................................................................26200.051000100000000000000000000000000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAC....................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000001000000000000000000000000
................................................................TAGTAGCATTTTGTTGTA............................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATTT...................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
................................TCGTTCTCAATTTTCA-AAAAATCAAG...................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................ATCAAGCTGCATAGTAGCAT.....................................................................................................................................................................................................................................................................................20200.051000000100000000000000000000000000000000000000000000000000000000
............................................................TGCATAGTAGCATTTTGTTGTA............................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................TGTTGTATGG-CGTTACTCATCT............................................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
..........................................TTTTCA-AAAAATCAAGCTGCATAG...........................................................................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCATT....................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCAATTC.................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
TG-AGA--GCGCAATGCTA-CAGATTTCGTT...............................................................................................................................................................................................................................................................................................................................27200.051000000000000000000001000000000000000000000000000000000000000000
......................................................TCAAGCTGCATAGTAGCAT.....................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000001
..............................................................CATAGTAGCATTTTGTTGTATG..........................................................................................................................................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCATG...................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
.................TA-CAGATTTCGTTTTCGTTCTCT.....................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000001000000000000000000000000
........................................................................TTTTGTTGTATGG-CGTTACTCAT..............................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.............ATGCTA-CAGATTTCGTTTTCG...........................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
..................A-CAGATTTCGTTTTCGTTCTCAA....................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................TTTTGTTGTATGG-CGTTACTCATCT............................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
....................................................AATCAAGCTGCATAGTAGCATT....................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
...................................................................TAGCATTTTGTTGTATGG-CGTTACT.................................................................................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
..............................TTTCGTTCTCAATTTTCA-AAAAATCAA....................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.......................ATTTCGTTTTCGTTCTCAAT...................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000010000000000000000000000000
.G-AGA--GCGCAATGCTA-CAGATTTCGT................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................GCATTTTGTTGTATGG-CGTTACTCATC.............................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................GCTGCATAGTAGCATTTTGTTGTATG..........................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................CAAGCTGCATAGTAGCATTTTG.................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.....................................CTCAATTTTCA-AAAAATCAAGCTGCAT.............................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................CTGCATAGTAGCATTTTGTTGTATG..........................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTA-GTGTTTTTATT-GTCTT--------TGGAA...........................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
.............................................TCA-AAAAATCAAGCTGCATAGTAG........................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
..........GCAATGCTA-CAGATTTCGTTTTCGT..........................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000001000
..............................TTTCGTTCTCAATTTTCA-AAAAATC......................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.........................TTCGTTTTCGTTCTCAATTTTCA-AAAAAT.......................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000001000000000000000000000000000
........................TTTCGTTTTCGTTCTCAATTTTCA-A............................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000001000000000000000000000000000000
..................................................AAAATCAAGCTGCATAGTAGCATTTT..................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
........................TTTCGTTTTCGTTCTCAATTTTC...............................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................TTGTTGTATGG-CGTTACTCATCTTA-G........................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.................................CGTTCTCAATTTTCA-AAAAATCAAGC..................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
................CTA-CAGATTTCGTTTTCGTTCTC......................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
....................CAGATTTCGTTTTCGTTCTCAATTTT................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
.............................................TCA-AAAAATCAAGCTGCATAGTAGCATTT...................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................GTTGTATGG-CGTTACTCATCTTA-.........................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
.........CGCAATGCTA-CAGATTTCGTTTTCG...........................................................................................................................................................................................................................................................................................................................25200.051000010000000000000000000000000000000000000000000000000000000000
.............................TTTTCGTTCTCAATTTTCA-AAAAATCAA....................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................ATCAAGCTGCATAGTAGCATTTTG.................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................CTTA-GTGTTTTTATT-GTCTT--------TGGTC...........................................................................................................................................................................................................................25200.051000000000000000000000000000000010000000000000000000000000000000
droMoj3
TA-TAC--ATATATATAAATCGATATCAGTTC------AT-----AAC-AAAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGC-----T-TTAAACTTAAATTAACTTAAAGAAGTTTAAATTT-------T------------------CAATGGATCTTTGCC------------------------------------TTTTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AT-GCA----------------------------------------------------------------------------TACCAATTGTATATTTTGCTTC-TTTTATT-GTATATCAACTAATCTTAATATATA-----TATA----------------------------TATATATATTTATAT-----A-TGTATATATATGCG----------TAAATT-----T-TAATT---------------CTTTATATTGAGTATTTA---TT-----------------------------------------------------------------------AASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:25 PM