ID:

dsi_18799

 Coordinate:

3l:6991688-6991837 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.9 -3.6 -3.5

Flybase annnotation

five_prime_UTR [3l_6991644_6991687_+]; exon [3l_6991644_6991687_+]; intron [3l_6991688_6992424_+]

No Repeatable elements found

Sense Strand Reads

------############################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACACAACAGTAAGTGTTTAGTTTAAATTCAATTACCCAGCGGCTAATGGCTGGTAATTTCGGTGCTGGTGACACATAAAGTGGATATTTCATTTCGTGCGAGTTTATACACCTGCAGAACTCAATTATGGAAATTCGCCAGGCAACGGGCACTGATGAATATATAGTACAAAAGAATCGCTTTTGAAACGCATATTCTGGAACATGCT
******************************************************************************************************************************........(((.((((.((......)).)))))))..........******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 O002
Head
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
....................GTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 19 0 1 11.00 11 7 4 0 0 0 0 0 0 0 0 0 0
.............AGACACTGTTTAGTTCTG........................................................................................................................................................................................................................... 18 0 1 7.00 7 0 0 1 5 0 0 0 0 1 0 0 0
................CACTGTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 23 0 1 7.00 7 4 2 1 0 0 0 0 0 0 0 0 0
................CACTGTTTAGTTCTGTGGC....................................................................................................................................................................................................................... 19 0 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0 0
....................GTTTAGTTCTGTGGCAGG.................................................................................................................................................................................................................... 18 1 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0
...............ACACTGTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 24 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0
.................ACTGTTTAGTTCTGTGGC....................................................................................................................................................................................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
..................CTGTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
....................GTTTAGTTCTGTGGCAGGC................................................................................................................................................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...................TGTTTAGTTCTGTGGCAGCCAACACAC............................................................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACCTGCAGAACTCAATTATG............................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TGCGAGCTTATACACCTGCAGT.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............AGACACTGTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATCGCTTTTGAAACGCATATTCTG......... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GAGTTTATACACCTGCAGAACT....................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................ACTGTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................GTTTAGTTCTGTGGCAGCCAA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................TGCAGAACTCAATTATGGAAATTC........................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GTTCTGTGGCAGCCAACACACAAC......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............GACACTGTTTAGTTCTGTGGCAGCG................................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................CTGTTTAGTTCTGTGGCAGCCAACACAC............................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................TGTTTAGTTCTGTGGCAG..................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............GACACTGTTTAGTTCTGG.......................................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............AGACACTGTTTAGTTCTGTGGCAGCCA.................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................GCAGCCAACACACAACAGTAAGT.................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................GTTTAGTTCTGTGGCAGC.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................TGTTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................CACTGTTTAGTTCTGTGGCAGCCAAC................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GTTCTGTGGCAGCCAACAC.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................CACTGTTTAGTTCTGTGGCAGGC................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AACGCATATTCTCGAACAT... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............AGACACTGTTTAGTTCTGTGGCAGG.................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................AACACACAACAGTAAGTGTT............................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...................TGTTTAGTTCTGTGGCAGCCAACA............................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................GCAGCCAACACACAACAGTAA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................CTGTTTAGTTCTGTGGCAGCCAAC................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................ACTGTTTAGTTCTGTGGCAGCCAACACAC............................................................................................................................................................................................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................AGTTCTGTGGCAGCCAACACACAA.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............AGACACTGTTTAGTTCTGTGGCAGCCAA................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GTTTATACACCTGCAGAACT....................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TATTTCATTTCGTGCGAG.......................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................TTTAGTTCTGTGGCAGCC................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................AACACACAACAGTAAGTG................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............ACACTGTTTAGTTCTGTGGCA...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................GCAGCCAACACACAACAG....................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................CACTGCTTAGTTCTGTGGCAGCCAACA............................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTATACACCTGCAGAACTCAATTATGGA............................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................TTCTGTGGCAGCCAACAC.............................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................GGTAATTTCGGTGCTGGT........................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................GTTTAGTTCTGTGGCAGAC................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTTATACACCTGCAGAACTCAA.................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACCTGCAGAACTCAATTA................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................CTGTTTAGTTCTGTGGCA...................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................CAACACACAACAGTAAGT.................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................CATTTCGTGCGAGTTTATACACCTGCAG........................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................GGTGCTGGTGACACATAAAGTGG............................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAGTACAAAAAAATCGGTTTTT....................... 22 3 5 0.40 2 0 0 0 0 0 0 2 0 0 0 0 0
.................................................................................................................................................................................................................ACAAAAGAATCGCTT.......................... 15 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................TTTGACCCGCAGATTCTGGA....... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0
..........TTCAGACACTGTTGAGA............................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
......................TTAGTTTTGTGGCGGCCA.................................................................................................................................................................................................................. 18 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0
...................TGTATAGTTCTGTGG........................................................................................................................................................................................................................ 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................AGTACAAAAAAATCGGTT.......................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................GGTGACGCATGAAGTGGAC........................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................TTGAGTTCTGTGGCA...................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.....................TTTAATTCTGTGGCAACC................................................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCCTAACCTTAAGTCTGTGACAAATCAAGACACCGTCGGTTGTGTGTTGTCATTCACAAATCAAATTTAAGTTAATGGGTCGCCGATTACCGACCATTAAAGCCACGACCACTGTGTATTTCACCTATAAAGTAAAGCACGCTCAAATATGTGGACGTCTTGAGTTAATACCTTTAAGCGGTCCGTTGCCCGTGACTACTTATATATCATGTTTTCTTAGCGAAAACTTTGCGTATAAGACCTTGTACGA
*******************************************************************************........(((.((((.((......)).)))))))..........****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
.................................CGTCGGTTTTGTGATGTCACT.................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0
................................................................................CGCCGATTACCGATCCTTCA...................................................................................................................................................... 20 3 9 0.11 1 0 1 0
........................................TGTATGTTGTCATCCATAA............................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:6991638-6991887 + dsi_18799 CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACAC---AACAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACCCAG-CGGCTAATG----------GCTGGTA--ATTTCGG-------------TGCT-------GGTGACACATAAA--GTGGATATTTC-ATT---------------------TCGTGCGAGT-TTATACACCTGCA------GAACTCAATTATGGAAATTCGCCAGGCAACG-GGC---ACTGATGAAT---------------ATA-----------T---------AGTA-------------CA----AA--A---------------GAATCGCTTTTGAAACGCATATTCTGGAAC-------------ATGCT
droSec2 scaffold_2:7051414-7051663 + CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACAC---AACAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACCCAG-CGGCTAATG----------GCTGGTA--ATTTCGT-------------TGCT-------GGTGACACATAAA--GTGGATATTTC-ATT---------------------TCGAGCGAGC-TTATACACCTGCA------GAACTCAATTATGGAAATTCGCCAGGCAACA-GGC---ACTGATGAAA---------------ATA-----------T---------AGTA-------------CA----AA--A---------------GAATCGCTTTTGAAACGCATATTCTGGAAC-------------ATGCT
dm3 chr3L:7124959-7125202 + CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAAACAACACAC---AACAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACCCAG-CTGCTAATG----------GGTGGTA--ATATCAG-------------TGCT-------GGTGACACATAAA--GTG-----GAC-ATT---------------------TCGTGCGAGT-TTATACACCTGCA------GAGCTCAATTATGGAAATTCGCCAGGCAACA-GGC---ACTGATGAAA---------------ATA-----------T---------AGTA-------------CA----AA------------------AAATCGCTTTTGAAACGCATATTCTGGAAC-------------ATGCT
droEre2 scaffold_4784:4222683-4222946 - CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACA-----CCAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACACAG-CTGCTGATA-GCTGA--TAGGTGGTA--ATATCAGTGCTCACTAATTGTGGA-------TGTGACACGTAAA--GTG-----GAC-ATT---------------------TGGTGCGAGC-TTCTACACCTGCAGCA---GAACTCAATTATGGAAATTCGCCAAGCAACA-GGC---ACTGAGAAAA---------------ATA-----------T---------TGTG-------------CA----A-------------------AAATCGGCTTCGAAACGCATATTCCAGAAC-------------ATGCC
droYak3 3L:7721788-7722052 + CGGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----CCAGTAAGT---GTATAGTTTAA---------------------------------------ATTCAATTACCCAG-CTGCTGATA-GGGGATATAGGTGGTA--ATATCAGTGCCCAGTAATTGTGGT-------TGTGACACATAAA--GTG-----GAC-ATA---------------------TCGTGCGAGT-TTAAACACCTGCA------GAACTCAATTATGGAAATTCGCCTAACAGCA-GAC---ACTGAGCAAA---------------ATA-----------T---------AGTG-------------CA----AT--C---------------AAGTCTGTTTCAAAACGCATATTCTGAAAC-------------GTACT
droEug1 scf7180000409466:5279737-5280017 + CAGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----AAAGTAAGT---GTTTAGTTTAAATTGGCC-------GCGGTCTGC----------------ATTCAATTGCCCCAAAAGCCC-TTGCC------A------CCTCTATCTGTATTCCGTAATTGTGGA-------TGTGACACATAAA--GTA-----CTC-ATTAAGATAATG-------GTAACTTGTGCGATT-TTGGACACCTGTA------AAATTCGATTATGGAAATTTTCAAAGCAATA-AAC---ACTCAGCAAA---------------AAC-----------TGTGTTTTG-TGTG----------------------------------------AA------TCAAAATTTATAATCAAGAAC-------------TT-TG
droBia1 scf7180000302193:6030209-6030515 + CAGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----AAAGTAAGT---GCCCAGTCCGAATTGCCC-------GCAGTCTGC----------------ATTCAATTACCCCA-GAGCCC-TAGCC------C------C--CTATCAGTGCCCAATAATTGTGCT-------TGTGACACATAAA--GTA-----CTT-ATTTAGATAGAG-------GTACCCTGCGCGAAT-TTGGACACCTGCA------ACACTCAATTATGGAGAACAAC-AAGCAGTC-AGC---ACTGAGCAAA---------------ATA-----------T----TCC--AGTG-AAACTAA-TCC---------AAAGATAA-TAATTACAAATATTGGTTCTAGAACACACGGTCTAGAGC-------------TTGTT
droTak1 scf7180000415773:570957-571242 - CAGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----AGAGTAAGT---GCCCAGTTTAAATTGCCC-------GCGGTCTGC----------------ATTCAATTACCCCAAAAGCCC-TATCC------A------C--CTATCGGTGCCCACTAATTGTGGT-------TGTGACACATAAA--GTA-----CTC-ATTTAGATAGAG-------CTAACTTGTGCGAAT-TTGGACACCTGCAACA---GAATT--ATAATGGAAATTTACAAAGCAATA-AGC---ACTGAGGAAAA--------------ATC-----------T---------AGCT----------GA---------GAATTTAA-----------A----ATTTCAAAATATATATTGTGGAAC-------------ATACG
droEle1 scf7180000491255:314057-314337 - CAGATTGGAATTCAGACAGTGTTTAGTTCTGCGACAGCCAACACA-----AAAGTAAGT---GCCCAATTTAAGTTGCCC-------GCGGTCTGC----------------ATTCAATTGTCCCAAAAGCCC-TCACC------A------C--CTATCAGTGGCAACTAATTGTAGT-------TGTGACACGAAAA--GTT-----CAA-AATTAGATAGTG--------TAAGGTGTGTGAATTTTGGGTACCTGCA------C-------CTAGGGAAATTCACAAACCAATAAGGC---ACTGAGCAAA---------------ACA-----------AGTGTTCCT-TGTG-A-------------------------------------CAATC-ATTCTAAAGCGAATATTCTGGAAT-------------ATACT
droRho1 scf7180000779994:16722-17003 + CGGAATGGAATTCAGACAGTGTTTAGTTCTGTGACAGCCAACACA-----AAAGTAAGT---GACCAATTGCCACTGCCC-------GCGGCATGC----------------ATTCAATTGCCCCAACAGAAC-TCACC------A------C--CTATCAGTGCCCACTAGTTGTGGT-------TGTGACACAAAAA--GTT-----CAACATTTAGATAGTG-------ATA-GGTG--------TTGGACACCTGC-------------AATTATGGAAATTAACAAACCGACATGGC---ACTGAGCAAA---------------ATA-----------AGTGATTC--AGTGC-----------TTAAACAA-----TG------------TAA---TCTTAAAAACAAATATTCTAGAAC------------TTTGTT
droFic1 scf7180000453839:1105426-1105719 + CAGATTGGAATTCAGACAGTGTTTAGTTCTGTGACAGTCAACACAA---AAAAGTAAGT---GCCCAATTTCAATTGCCCG------GCGGTCTGC----------------ATTCAATTACCCCGAAAGCCC-TTACC------C------A--CCAGCAGTGCCCACTAATTGTGGT-------TGTGACACATAAA--GCA-----CTA-ATTTAGATAGGG-------GCACGGTGTACGAAT-TTGGACACCTGCAACA----CACTCAATTGTGGAAATTTACACCCCAATA-CGC---ACTGAGAAAA---------------ACA-----------AGTGTTTTC-CGTG-AACGTAGGTCA---------AAAGTCAA----------------AGCTTAAA-----------AGAAA-------------TTACT
droKik1 scf7180000302391:117214-117514 - GAGATTGGAATTCAGACAGTGTTTAGTTCTGTGTCCGTCAACACC-----AAAGTAAGT---GTCGAGTTCCAA-----------------TCTGG----------------ATTCAATTGCTCCA-TAGCCC-TGCCCGGAATTA------G--CTATCGGTGTCCACAAATTGTAGT-------TCTGACACATAAA--A-A-----CTC-GGTCAGATAATACCCGGA-ATAGGGTGTGTGAAA-TCGGGCACCTGCC------GAATTTAATTATGGAAATGTACAAGACCATA-AAC---ACTGCAAAAA---------------ATC-----------G---------GGCT-------------TT----A-AAAATCAAATAAA-----TACCCTGTTTTAAATGGAGTAATTTGTGCA-------GTGATTAGGCC
droAna3 scaffold_13337:1655952-1656301 + GGGTTTGGAATTCAGACAGTGTGTAGTTCTGTGACCGCCAACACGC--CAGCAGTAAGT---GCCAAGCTCCAATTGTCCGTTCCGAGGGGTCTGCCGGCCCGAGTAATTCAATTCAATTGCCCGA-CG-C---T---C------A------C--CTATCAGTGCCCACTAATGGTGGT-------TGTGACATATAAAAAGAA----CCTC-ATTTAGATAGTAGGTACACGTAAGGTGTGCGAAT-TC-GGCACCTGCACCAACACCATTCAATTCTGGAATTCTACCAAGCAATT-AATGAGTT----TCCAATAGCATTGGATGAA-TAGGAAGTTTGGAAGTGATTACTAAT-------------CTC----A---A---------------ATGTCACTTTTTAGAAGAGTACTTTAGTCT-------------GGTTT
droBip1 scf7180000396544:438640-438999 - GGGTTTGGAATTCAGACAGTGTTTAGTTCTGTGCCCGCCAACACG-----ACAGTAAGT---GCCTAGCTCCAATTGTCCATTCCGAGGGGTCTGCCGTCCCCAGTAATTCAATTCAATTGCCCGA-CG-C---T---C------A------C--CTATCAGTGCCCACTAATGGTAAAAAACACATAACACACATAAAAAGAA-----CTC-ATTTAGATAGTAGGTACACATAAGGTGTGCGAAT-T-CGACACCTGCG------CCACTCAATTATGGAATTCTACCAAGCAATT-AAT---TTTGTGGCCAATACCATTGGATAAA-TAGGAAGATTGGAAGTGATTAGCCAC-------------CTC----A-ACTGTCA------------C----ATTTTAAA-AGAGTACTTTGTTCCGGTTTTAGTCAC-TAGCT
dp5 XR_group6:2311461-2311560 - AAGATTGGAATTCAGACTGTGTTTAGTTCTGTAACGGCCGAGACAT---ACAAGTAAGTCGAG-TCAAGTGATAGTGCCT-------GTAGCCTGG----------------TGCCTAGTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT
droPer2 scaffold_9:601368-601467 - AAGATTGGAATTCAGACTGTGTTTAGTTCTGTAACGGCCGAGACAT---ACAAGTAAGTCGAG-TCAAGTGATAGTGCCT-------GTAGCCTGG----------------TGCC---------------TAGTG----------GCTGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004511:9432818-9432877 - GAGATTGGGATTCAGACTGTGTTTAGTTCTACGACCGCAAAGACATAAAAAAAGTAAGT---G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACAC---AACAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACCCAG-CGGCTAATG----------GCTGGTA--ATTTCGG-------------TGCT-------GGTGACACATAAA--GTGGATATTTC-ATT---------------------TCGTGCGAGT-TTATACACCTGCA------GAACTCAATTATGGAAATTCGCCAGGCAACG-GGC---ACTGATGAAT---------------ATA-----------T---------AGTA-------------CA----AA--A---------------GAATCGCTTTTGAAACGCATATTCTGGAAC-------------ATGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................GTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................19111.001104700000000000000
.............AGACACTGTTTAGTTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................1817.00750011000000000000
................CACTGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2317.00702410000000000000
................CACTGTTTAGTTCTGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................1915.00502300000000000000
....................GTTTAGTTCTGTGGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................1814.00401300000000000000
...............ACACTGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2414.00402200000000000000
.................ACTGTTTAGTTCTGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300030000000000000
..................CTGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
...................TGTTTAGTTCTGTGGCAGCCAACACAC---............................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000000000
..............................................................................................................................................................................................................................................................ACCTGCA------GAACTCAATTATG.....................................................................................................................................................................2011.00101000000000000000
.............AGACACTGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTTTTGAAACGCATATTCTG......................2411.00100010000000000000
...................................................................................................................................................................................................................................................GAGT-TTATACACCTGCA------GAACT.............................................................................................................................................................................2211.00101000000000000000
.................ACTGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
....................GTTTAGTTCTGTGGCAGCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................................................TGCA------GAACTCAATTATGGAAATTC..............................................................................................................................................................2411.00100100000000000000
.........................GTTCTGTGGCAGCCAACACAC---AAC.........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..............GACACTGTTTAGTTCTGTGGCAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..................CTGTTTAGTTCTGTGGCAGCCAACACAC---............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...................TGTTTAGTTCTGTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..............GACACTGTTTAGTTCTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.............AGACACTGTTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
.................................GCAGCCAACACAC---AACAGTAAGT---...............................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
....................GTTTAGTTCTGTGGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...................TGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
................CACTGTTTAGTTCTGTGGCAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.........................GTTCTGTGGCAGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.............AGACACTGTTTAGTTCTGTGGCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
.......................................AACACAC---AACAGTAAGT---GTT............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...................TGTTTAGTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.................................GCAGCCAACACAC---AACAGTAA....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
..................CTGTTTAGTTCTGTGGCAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.................ACTGTTTAGTTCTGTGGCAGCCAACACAC---............................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
........................AGTTCTGTGGCAGCCAACACAC---AA..........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.............AGACACTGTTTAGTTCTGTGGCAGCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.....................................................................................................................................................................................................................................................GT-TTATACACCTGCA------GAACT.............................................................................................................................................................................2011.00101000000000000000
..............................................................................................................................................................................................................TATTTC-ATT---------------------TCGTGCGAG.......................................................................................................................................................................................................1811.00100100000000000000
.....................TTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................................AACACAC---AACAGTAAGT---G..............................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...............ACACTGTTTAGTTCTGTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.................................GCAGCCAACACAC---AACAG.......................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................................................................................................................................................................................................................................................TTATACACCTGCA------GAACTCAATTATGGA...................................................................................................................................................................2811.00100100000000000000
..........................TTCTGTGGCAGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000100000000
.....................................................................................................................................................GGTA--ATTTCGG-------------TGCT-------GGT................................................................................................................................................................................................................................................................1811.00101000000000000000
......................................................................................................................................................................................................................................................T-TTATACACCTGCA------GAACTCAA..........................................................................................................................................................................2211.00100100000000000000
..............................................................................................................................................................................................................................................................ACCTGCA------GAACTCAATTA.......................................................................................................................................................................1811.00100100000000000000
..................CTGTTTAGTTCTGTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
......................................CAACACAC---AACAGTAAGT---...............................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...................................................................................................................................................................................................................C-ATT---------------------TCGTGCGAGT-TTATACACCTGCA------G.................................................................................................................................................................................2811.00100010000000000000
................................................................................................................................................................GG-------------TGCT-------GGTGACACATAAA--GTGG................................................................................................................................................................................................................................................2311.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................A-------------CA----AA--A---------------GAATCGCTT.......................................1530.33100000001000000000
droSec2
CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACAC---AACAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACCCAG-CGGCTAATG----------GCTGGTA--ATTTCGT-------------TGCT-------GGTGACACATAAA--GTGGATATTTC-ATT---------------------TCGAGCGAGC-TTATACACCTGCA------GAACTCAATTATGGAAATTCGCCAGGCAACA-GGC---ACTGATGAAA---------------ATA-----------T---------AGTA-------------CA----AA--A---------------GAATCGCTTTTGAAACGCATATTCTGGAAC-------------ATGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................GTTTAGTTCTGTGGCAGCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021010
...................TGTTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020110
...................TGTTTAGTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2412.0021010
....................GTTTAGTTCTGTGGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
...................TGTTTAGTTCTGTGGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.....................TTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021010
..................CTGTTTAGTTCTGTGGCAGCCAACACA................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.......................................................................................................................TACCCAG-CGGCTAATG----------GC.........................................................................................................................................................................................................................................................................................................1811.0010001
.................ACTGTTTAGTTCTGTGGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................GTTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................TGTTTAGTTCTGTGGCAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.......................TAGTTCTGTGGCAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
...........TCAGACACTGTTTAGTTCTGTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
................................................................................................................ATTCAATTACCCAG-CGGC..........................................................................................................................................................................................................................................................................................................................1811.0010010
...................TGTTTAGTTCTGTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................................................AACAGTAAGT---GTTTAGTTTAA---------------------------------------.............................................................................................................................................................................................................................................................................................................................................2111.0010001
....................................................................................................................AATTACCCAG-CGGCTAATG----------GC.........................................................................................................................................................................................................................................................................................................2111.0010001
.........................GTTCTGTGGCAGCCAACACAC---............................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCATATTCTGGAAC-------------.....1811.0010010
...............................................................................................................................................................................................................ATTTC-ATT---------------------TCGAGCGAGC-TTAT.................................................................................................................................................................................................2211.0011000
.................................................................................................................TTCAATTACCCAG-CGGCTAATG----------GC.........................................................................................................................................................................................................................................................................................................2411.0011000
.....................TTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................GTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............AGACACTGTTTAGTTCTGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
....................GTTTAGTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...............ACACTGTTTAGTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.......................................................................................................................TACCCAG-CGGCTAATG----------GCT........................................................................................................................................................................................................................................................................................................1911.0010010
dm3
CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAAACAACACAC---AACAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACCCAG-CTGCTAATG----------GGTGGTA--ATATCAG-------------TGCT-------GGTGACACATAAA--GTG-----GAC-ATT---------------------TCGTGCGAGT-TTATACACCTGCA------GAGCTCAATTATGGAAATTCGCCAGGCAACA-GGC---ACTGATGAAA---------------ATA-----------T---------AGTA-------------CA----AA------------------AAATCGCTTTTGAAACGCATATTCTGGAAC-------------ATGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................TGGCAAACAACACAC---AAC.........................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AACAGTAAGT---GTTTAGTT.......................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000100100000000000000000000000000000
.................ACTGTTTAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGACACTGTTTAGTTCTGTGGCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TACCCAG-CTGCTAATG----------GGTGGT.....................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAACAACACAC---AACAGTA.....................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GCTAATG----------GGTGGTA--ATAT..............................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000
..................................................................................................................................................................................................ATAAA--GTG-----GAC-ATT---------------------TCGTGCGAG.......................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AACACAC---AACAGTAAGT---GT.............................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................G-CTGCTAATG----------GGTGGTA--A.................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTTTAGTTCTGTGGCAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGACACTGTTTAGTTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..............GACACTGTTTAGTTCTGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TT---------------------TCGTGCGAGT-TTATACACCTG..........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................GTGGCAAACAACACAC---AA..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTAGTTCTGTGGCAAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTTTAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTGGCAAACAACACAC---AAC.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CCCAG-CTGCTAATG----------GGTGG......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCA------GAGCTCAATTATGGAAA.................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAACGCATATTCTGGAA...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGTTTAGTTCTGTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................T---------------------TCGTGCGAGT-TTATACACCT...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................T-------GGTGACACATAAA--GTG-----GA..........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................GCAAACAACACAC---AACAGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTTTAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACTGTTTAGTTCTGTGGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTAGTTCTGTGGCAAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................ACAACACAC---AACAGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGGCAAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTGTGGCAAACAACACAC---............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCAGACACTGTTTAGTTCTGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAACAACACAC---AACAGTAAGT---GT.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
............................CTGTGGCAAACAACACAC---AACA........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTACCCAG-CTGCTAATG----------GGTGG......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTTCTGTGGCAAACAACACAC---AAC.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGGCAACA-GGC---ACTGATG.....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCAAACAACACAC---AACAG.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCAAACAACACAC---AACA........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAACACAC---AACAGTAAGT---GT.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............AGACACTGTTTAGTTCTGTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TAGTTCTGTGGCAAACAACACAC---A...........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGGCAAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGACACTGTTTAGTTCTGTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGGCAAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TAGTTCTGTGGCAAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCA------GAGCTCAATTATGGAAATTCG.............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................GTTTAGTTCTGTGGCAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTAGTTCTGTGGCAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AG-------------TGCT-------GGTGACACATAA.......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCAAACAACACAC---AACAGTAAGT---GTT............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGTTTAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TAAA--GTG-----GAC-ATT---------------------TCGTGCGAGT-TTA..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GCTAATG----------GGTGGTA--ATATCAG-------------..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTGGCAAACAACACAC---AACAGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACTGTTTAGTTCTGTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTTTAGTTCTGTGGCAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AACACAC---AACAGTAAGT---GTTTAGT........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................ACTGTTTAGTTCTGTGGCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTGTTTAGTTCTGTGGCAAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TAGTTCTGTGGCAAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................GTG-----GAC-ATT---------------------TCGTGCGAG.......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACTGTTTAGTTCTGTGGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CCCAG-CTGCTAATG----------GGTGGTA--ATA...............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TAGTTCTGTGGCAAACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............AGACACTGTTTAGTTCTGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCAGACACTGTTTAGTATC...............................................................................................................................................................................................................................................................................................................................................................................................................................19170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................A--ATATCAG-------------TGCT-------GGTGATC............................................................................................................................................................................................................................................................19180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGATTGGAATTCAGACACTGTTTAGTTCTGTGGCAGCCAACACA-----CCAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAATTACACAG-CTGCTGATA-GCTGA--TAGGTGGTA--ATATCAGTGCTCACTAATTGTGGA-------TGTGACACGTAAA--GTG-----GAC-ATT---------------------TGGTGCGAGC-TTCTACACCTGCAGCA---GAACTCAATTATGGAAATTCGCCAAGCAACA-GGC---ACTGAGAAAA---------------ATA-----------T---------TGTG-------------CA----A-------------------AAATCGGCTTCGAAACGCATATTCCAGAAC-------------ATGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................GTTTAGTTCTGTGGCAGCCAACACA-----CC.........................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000
....................GTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
...................TGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021001000
...................TGTTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.....................TTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...................TGTTTAGTTCTGTGGCAGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
.................ACTGTTTAGTTCTGTGGCAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..................CTGTTTAGTTCTGTGGCAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...................TGTTTAGTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
....................GTTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...................TGTTTAGTTCTGTGGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.......................................................AAGT---GTTTAGTTTAA---------------------------------------ATT..........................................................................................................................................................................................................................................................................................................................................1811.0010000010
............................................A-----CCAGTAAGT---GTTTAGTT.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................GTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
............................................A-----CCAGTAAGT---GTTTAGTTTAA---------------------------------------ATTCAA.......................................................................................................................................................................................................................................................................................................................................2711.0010000100
...................TGTTTAGTTCTGTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000
.....................TTTAGTTCTGTGGCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
....................GTTTAGTTCTGTGGCAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
......................TTAGTTCTGTGGCAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
droYak3
CGGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----CCAGTAAGT---GTATAGTTTAA---------------------------------------ATTCAATTACCCAG-CTGCTGATA-GGGGATATAGGTGGTA--ATATCAGTGCCCAGTAATTGTGGT-------TGTGACACATAAA--GTG-----GAC-ATA---------------------TCGTGCGAGT-TTAAACACCTGCA------GAACTCAATTATGGAAATTCGCCTAACAGCA-GAC---ACTGAGCAAA---------------ATA-----------T---------AGTG-------------CA----AT--C---------------AAGTCTGTTTCAAAACGCATATTCTGAAAC-------------GTACTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................TGTTTAGTTCTGTGACAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2413.00302010000000
.....................TTTAGTTCTGTGACAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201000010000
........................AGTTCTGTGACAGCCAACACA-----CC.........................................................................................................................................................................................................................................................................................................................................................................................................2312.00201100000000
.........................GTTCTGTGACAGCCAACACA-----CCA........................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000000000
......................TTAGTTCTGTGACAGCCAACACA-----CC.........................................................................................................................................................................................................................................................................................................................................................................................................2512.00201100000000
.................ACTGTTTAGTTCTGTGACAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000
.........................GTTCTGTGACAGCCAACACA-----CC.........................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100000000
.....................TTTAGTTCTGTGACAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1812.00211000000000
........................AGTTCTGTGACAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000
.......................TAGTTCTGTGACAGCCAACACA-----CC.........................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............AGACACTGTTTAGTTCTGTGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............AGACACTGTTTAGTTCTGTGACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
......................TTAGTTCTGTGACAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.........................GTTCTGTGACAGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............ACACTGTTTAGTTCTGTGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............ACACTGTTTAGTTCTGTGACAGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
................................................................................................................................................................................................ACATAAA--GTG-----GAC-ATA---------------------TCGTGCGAGT-.....................................................................................................................................................................................................2611.00100000010000
...........................TCTGTGACAGCCAACACA-----CCAGT......................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................GCCAACACA-----CCAGTAAGT---G..............................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AACGCATATTCTGAAAC-------------GTA..2011.00101000000000
....................GTTTAGTTCTGTGACAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...................................AGCCAACACA-----CCAGTAAGT---GT.............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............ACACTGTTTAGTTCTGTGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......................TTAGTTCTGTGACAGCCAACACA-----CCA........................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...................TGTTTAGTTCTGTGACAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................TTCTGTGACAGCCAACACA-----CCAGT......................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............................................................................................................................G-CTGCTGATA-GGGGATATAGGT........................................................................................................................................................................................................................................................................................................2211.00100100000000
............CAGACACTGTTTAGTTCTGTGACAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
....................GTTTAGTTCTGTGACAGCCAACACA-----CCA........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...................TGTTTAGTTCTGTGACAGCCAACACA-----C..........................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................CTGTTTAGTTCTGTGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
......................TTAGTTCTGTGACAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
...................TGTTTAGTTCTGTGACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
....................................................................................................................................GATA-GGGGATATAGGTGGTA--..................................................................................................................................................................................................................................................................................................2011.00100000010000
......................TTAGTTCTGTGACAGCCAACACA-----CCAA.......................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
................CACTGTTTAGTTCTGTGACAGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.................................................................................................................................................................................................CATAAA--GTG-----GAC-ATA---------------------TCGTGCGAG.......................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................GGGATATAGGTGGTA--ATA...............................................................................................................................................................................................................................................................................................1811.00101000000000
.............................................................................................................................................ATATAGGTGGTA--ATATCAGTGCCCAGT...................................................................................................................................................................................................................................................................................2711.00100000010000
.............................................................................................................................G-CTGCTGATA-GGGGATATAGGC........................................................................................................................................................................................................................................................................................................2211.00100100000000
..........................TTCTGTGACAGCCAACACA-----CC.........................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEug1
CAGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----AAAGTAAGT---GTTTAGTTTAAATTGGCC-------GCGGTCTGC----------------ATTCAATTGCCCCAAAAGCCC-TTGCC------A------CCTCTATCTGTATTCCGTAATTGTGGA-------TGTGACACATAAA--GTA-----CTC-ATTAAGATAATG-------GTAACTTGTGCGATT-TTGGACACCTGTA------AAATTCGATTATGGAAATTTTCAAAGCAATA-AAC---ACTCAGCAAA---------------AAC-----------TGTGTTTTG-TGTG----------------------------------------AA------TCAAAATTTATAATCAAGAAC-------------TT-TGSizeHit CountTotal NormTotal
No Reads
droBia1
CAGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----AAAGTAAGT---GCCCAGTCCGAATTGCCC-------GCAGTCTGC----------------ATTCAATTACCCCA-GAGCCC-TAGCC------C------C--CTATCAGTGCCCAATAATTGTGCT-------TGTGACACATAAA--GTA-----CTT-ATTTAGATAGAG-------GTACCCTGCGCGAAT-TTGGACACCTGCA------ACACTCAATTATGGAGAACAAC-AAGCAGTC-AGC---ACTGAGCAAA---------------ATA-----------T----TCC--AGTG-AAACTAA-TCC---------AAAGATAA-TAATTACAAATATTGGTTCTAGAACACACGGTCTAGAGC-------------TTGTTSizeHit CountTotal NormTotal
No Reads
droTak1
CAGATTGGAATTCAGACACTGTTTAGTTCTGTGACAGCCAACACA-----AGAGTAAGT---GCCCAGTTTAAATTGCCC-------GCGGTCTGC----------------ATTCAATTACCCCAAAAGCCC-TATCC------A------C--CTATCGGTGCCCACTAATTGTGGT-------TGTGACACATAAA--GTA-----CTC-ATTTAGATAGAG-------CTAACTTGTGCGAAT-TTGGACACCTGCAACA---GAATT--ATAATGGAAATTTACAAAGCAATA-AGC---ACTGAGGAAAA--------------ATC-----------T---------AGCT----------GA---------GAATTTAA-----------A----ATTTCAAAATATATATTGTGGAAC-------------ATACGSizeHit CountTotal NormTotal
No Reads
droEle1
CAGATTGGAATTCAGACAGTGTTTAGTTCTGCGACAGCCAACACA-----AAAGTAAGT---GCCCAATTTAAGTTGCCC-------GCGGTCTGC----------------ATTCAATTGTCCCAAAAGCCC-TCACC------A------C--CTATCAGTGGCAACTAATTGTAGT-------TGTGACACGAAAA--GTT-----CAA-AATTAGATAGTG--------TAAGGTGTGTGAATTTTGGGTACCTGCA------C-------CTAGGGAAATTCACAAACCAATAAGGC---ACTGAGCAAA---------------ACA-----------AGTGTTCCT-TGTG-A-------------------------------------CAATC-ATTCTAAAGCGAATATTCTGGAAT-------------ATACTSizeHit CountTotal NormTotal
No Reads
droRho1
CGGAATGGAATTCAGACAGTGTTTAGTTCTGTGACAGCCAACACA-----AAAGTAAGT---GACCAATTGCCACTGCCC-------GCGGCATGC----------------ATTCAATTGCCCCAACAGAAC-TCACC------A------C--CTATCAGTGCCCACTAGTTGTGGT-------TGTGACACAAAAA--GTT-----CAACATTTAGATAGTG-------ATA-GGTG--------TTGGACACCTGC-------------AATTATGGAAATTAACAAACCGACATGGC---ACTGAGCAAA---------------ATA-----------AGTGATTC--AGTGC-----------TTAAACAA-----TG------------TAA---TCTTAAAAACAAATATTCTAGAAC------------TTTGTTSizeHit CountTotal NormTotal
No Reads
droFic1
CAGATTGGAATTCAGACAGTGTTTAGTTCTGTGACAGTCAACACAA---AAAAGTAAGT---GCCCAATTTCAATTGCCCG------GCGGTCTGC----------------ATTCAATTACCCCGAAAGCCC-TTACC------C------A--CCAGCAGTGCCCACTAATTGTGGT-------TGTGACACATAAA--GCA-----CTA-ATTTAGATAGGG-------GCACGGTGTACGAAT-TTGGACACCTGCAACA----CACTCAATTGTGGAAATTTACACCCCAATA-CGC---ACTGAGAAAA---------------ACA-----------AGTGTTTTC-CGTG-AACGTAGGTCA---------AAAGTCAA----------------AGCTTAAA-----------AGAAA-------------TTACTSizeHit CountTotal NormTotal
No Reads
droKik1
GAGATTGGAATTCAGACAGTGTTTAGTTCTGTGTCCGTCAACACC-----AAAGTAAGT---GTCGAGTTCCAA-----------------TCTGG----------------ATTCAATTGCTCCA-TAGCCC-TGCCCGGAATTA------G--CTATCGGTGTCCACAAATTGTAGT-------TCTGACACATAAA--A-A-----CTC-GGTCAGATAATACCCGGA-ATAGGGTGTGTGAAA-TCGGGCACCTGCC------GAATTTAATTATGGAAATGTACAAGACCATA-AAC---ACTGCAAAAA---------------ATC-----------G---------GGCT-------------TT----A-AAAATCAAATAAA-----TACCCTGTTTTAAATGGAGTAATTTGTGCA-------GTGATTAGGCCSizeHit CountTotal NormTotal
No Reads
droAna3
GGGTTTGGAATTCAGACAGTGTGTAGTTCTGTGACCGCCAACACGC--CAGCAGTAAGT---GCCAAGCTCCAATTGTCCGTTCCGAGGGGTCTGCCGGCCCGAGTAATTCAATTCAATTGCCCGA-CG-C---T---C------A------C--CTATCAGTGCCCACTAATGGTGGT-------TGTGACATATAAAAAGAA----CCTC-ATTTAGATAGTAGGTACACGTAAGGTGTGCGAAT-TC-GGCACCTGCACCAACACCATTCAATTCTGGAATTCTACCAAGCAATT-AATGAGTT----TCCAATAGCATTGGATGAA-TAGGAAGTTTGGAAGTGATTACTAAT-------------CTC----A---A---------------ATGTCACTTTTTAGAAGAGTACTTTAGTCT-------------GGTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GTAGTTCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2515.005230000
........................AGTTCTGTGACCGCCAACACGC--CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2613.003210000
..................GTGTGTAGTTCTGTGACCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2013.003110010
.........................GTTCTGTGACCGCCAACACGC--CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..............GACAGTGTGTAGTTCTGTGACCGCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2812.002010010
........................AGTTCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2312.002011000
................CAGTGTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2312.002100010
..................GTGTGTAGTTCTGTGACCG........................................................................................................................................................................................................................................................................................................................................................................................................................1912.002002000
.............AGACAGTGTGTAGTTCTGTGACCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2512.002010001
...........................TCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
....................GTGTAGTTCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
..................GTGTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2112.002110000
......................GTAGTTCTGTGACCGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
.........................GTTCTGTGACCGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........TCAGACAGTGTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
...................TGTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....................GTGTAGTTCTGTGACCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................................................................TGTCCGTTCCGAGGGGTCTGCCGGCCCG......................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................TCTGTGACCGCCAACACGC--CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................AGTTCTGTGACCGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................TTCTGTGACCGCCAACACGC--CAGCA........................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................TAGTTCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................................................AGTAAGT---GCCAAGCTCCAATTGTCCGT...........................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................TGTGTAGTTCTGTGACCGCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................................................................GTCCGTTCCGAGGGGTCTGCCGGC.........................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................GTGTGTAGTTCTGTGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................................................................TGTCCGTTCCGAGGGGTCTGCC............................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................GTAGTTCTGTGACCGCCAACACGC--CA...........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.............................................................................TCCGTTCCGAGGGGTCTG..............................................................................................................................................................................................................................................................................................................................................................1811.001100000
................CAGTGTGTAGTTCTGTGACCGCCAACAC.................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.........................GTTCTGTGACCGCCAACACGC--CAGCA........................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................GTTCTGTGACCGCCAACACG................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................AGTGTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............AGACAGTGTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................GTTCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................GTAGTTCTGTGACCGCCAACACGC--CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
......................GTAGTTCTGTGACCGCCAACACGC--CAG..........................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................GTGTGTAGTTCTGTGACCGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................GAA-TAGGAAGTTTGGAAGT..................................................................................................1911.001010000
.................AGTGTGTAGTTCTGTGACCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................GTAGTTCTGTGACCGCCAACACGC--.............................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................GTTCCGAGGGGTCTGCCG...........................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................GTTCTGTGACCGCCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................GTTCTGTGACCGCCAACACGC--CAG..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................TGTGTAGTTCTGTGACCGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................CGCCAACACGC--CAGCAGTAAGT---GCC............................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
..........................TTCTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................CGC--CAGCAGTAAGT---GCCAAGCT.......................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........TCAGACAGTGTGTAGTTCTGTGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........................AGTTCTGTGACCGCCAACACGC--CAGCA........................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
....................GTGTAGTTCTGTGACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
............................CTGTGACCGCCAACACGC--C............................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATGTCACTTTTTAGAAGAG.............................1911.001010000
.........................GTTCTGTGACCGCCAACACGC--CA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................................................................................................................CTACCAAGCAATT-AATGAGC...........................................................................................................................................2020.501010000
droBip1
GGGTTTGGAATTCAGACAGTGTTTAGTTCTGTGCCCGCCAACACG-----ACAGTAAGT---GCCTAGCTCCAATTGTCCATTCCGAGGGGTCTGCCGTCCCCAGTAATTCAATTCAATTGCCCGA-CG-C---T---C------A------C--CTATCAGTGCCCACTAATGGTAAAAAACACATAACACACATAAAAAGAA-----CTC-ATTTAGATAGTAGGTACACATAAGGTGTGCGAAT-T-CGACACCTGCG------CCACTCAATTATGGAATTCTACCAAGCAATT-AAT---TTTGTGGCCAATACCATTGGATAAA-TAGGAAGATTGGAAGTGATTAGCCAC-------------CTC----A-ACTGTCA------------C----ATTTTAAA-AGAGTACTTTGTTCCGGTTTTAGTCAC-TAGCTSizeHit CountTotal NormTotal
No Reads
dp5
AAGATTGGAATTCAGACTGTGTTTAGTTCTGTAACGGCCGAGACAT---ACAAGTAAGTCGAG-TCAAGTGATAGTGCCT-------GTAGCCTGG----------------TGCCTAGTGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................GTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................25121.002101540200000
......................TTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2218.0080330200000
.........................GTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1918.0080800000000
..................GTGTTTAGTTCTGTAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2018.0080210500000
......................TTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080600200000
..................GTGTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070330100000
....................GTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2317.0070420100000
..................GTGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2616.0060120102000
..................GTGTTTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050500000000
.........................GTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040400000000
..................GTGTTTAGTTCTGTAACGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030210000000
...................TGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030300000000
.......................TAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030120000000
.................TGTGTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030210000000
....................GTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030120000000
................CTGTGTTTAGTTCTGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020110000000
.................TGTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020110000000
....................GTTTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
................CTGTGTTTAGTTCTGTAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020110000000
....................GTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020010100000
................CTGTGTTTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
.................TGTGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
................CTGTGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020110000000
...................TGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
....................GTTTAGTTCTGTAACGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........ATTCAGACTGTGTTTAGTTCTGTAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..............GACTGTGTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................CTGTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.....................TTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
...........................................CAT---ACAAGTAAGTCGAG-TC...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.......................TAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................CTGTGTTTAGTTCTGTAACGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................TGTAACGGCCGAGACAT---ACAA........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..................GTGTTTAGTTCTGTAACGGCCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..........................TTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000000
......................TTAGTTCTGTAACGGCCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................TGTGTTTAGTTCTGTAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
........................AGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............GACTGTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
..............................GTAACGGCCGAGACAT---AC..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................AGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..................GTGTTTAGTTCTGTAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................TAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
..............................GTAACGGCCGAGACAT---ACA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..................GTGTTTAGTTCTGTAACGGCCGAGACA................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........ATTCAGACTGTGTTTAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............AGACTGTGTTTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........................TTCTGTAACGGCCGAGACAT---ACAAA.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
..........................TTCTGTAACGGCCGAGACA................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................TTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................CTGTAACGGCCGAGACAT---ACAA........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
...........................TCTGTAACGGCCGAGACAT---............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
droPer2
AAGATTGGAATTCAGACTGTGTTTAGTTCTGTAACGGCCGAGACAT---ACAAGTAAGTCGAG-TCAAGTGATAGTGCCT-------GTAGCCTGG----------------TGCC---------------TAGTG----------GCTGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................GTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................23131.00312902000
..................GTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................25125.00252400001
....................GTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................24116.00161600000
................CTGTGTTTAGTTCTGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................19111.00111001000
..................GTGTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................21111.00111100000
..................GTGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................26110.0010910000
......................TTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2219.009612000
................CTGTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2719.009900000
.........................GTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1918.008710000
..................GTGTTTAGTTCTGTAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2017.007412000
....................GTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1917.007700000
..........................TTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1817.007600010
......................TTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2117.007610000
...........................TCTGTAACGGCCGAGACAT---ACAA........................................................................................................................................................................................................................................................................................................................................................................................................2315.005500000
................CTGTGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2814.004400000
.................TGTGTTTAGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2614.004400000
.....................TTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2314.004300001
....................GTTTAGTTCTGTAACGGCCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2314.004400000
.......................TAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
..................GTGTTTAGTTCTGTAACGGCCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2513.003300000
...............ACTGTGTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
..................GTGTTTAGTTCTGTAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
......................TTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................1912.002002000
....................GTTTAGTTCTGTAACGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...............ACTGTGTTTAGTTCTGTAACGGCCGAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
.....................TTTAGTTCTGTAACGGCCGAGACA................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
......................TTAGTTCTGTAACGGCCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........ATTCAGACTGTGTTTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.................................................ACAAGTAAGTCGAG-TCAAGTGATAGT.................................................................................................................................................................................................................................................................................................................................................................................2611.001000100
...........................TCTGTAACGGCCGAGACA................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................GTTTAGTTCTGTAACGGCCGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................AGTTCTGTAACGGCCGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...........................TCTGTAACGGCCGAGACAT---A...........................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................TCTGTAACGGCCGAGACAT---ACA.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................GTTTAGTTCTGTAACGGCCGA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................TGTGTTTAGTTCTGTAACGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............GACTGTGTTTAGTTCTGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............AGACTGTGTTTAGTTCTGTAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................CTGTGTTTAGTTCTGTAACGGCCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droWil2
GAGATTGGGATTCAGACTGTGTTTAGTTCTACGACCGCAAAGACATAAAAAAAGTAAGT---G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........ATTCAGACTGTGTTTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................18186.0086860000
.........................GTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1914.00412010
.........ATTCAGACTGTGTTTAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00330000
.........ATTCAGACTGTGTTTAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000
......................TTAGTTCTACGACCGCAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2113.00301020
..................GTGTTTAGTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2613.00302010
....................GTTTAGTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2412.00211000
......................TTAGTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201010
.......................TAGTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201010
....................GTTTAGTTCTACGACCGCAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
..........................TTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
......................TTAGTTCTACGACCGCAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201010
....................GTTTAGTTCTACGACCGCAAAGACAT...............................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000
.......................TAGTTCTACGACCGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................GTTCTACGACCGCAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
....................GTTTAGTTCTACGACCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................GTGTTTAGTTCTACGACCGCAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.........................GTTCTACGACCGCAAAGACA................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.................TGTGTTTAGTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.............................TACGACCGCAAAGACATAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
GAGATTGGGATTCAGACTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................TTCTACGACCGCAAAGACATAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
......................TTAGTTCTACGACCGCAAAGACAT...............................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...................................CGCAAAGACATAAAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
....................GTTTAGTTCTACGACCGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................TCTACGACCGCAAAGACATAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................TTTAGTTCTACGACCGCAAAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...........................TCTACGACCGCAAAGACATA..............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................AGTTCTACGACCGCAAAGACA................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........ATTCAGACTGTGTTTAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.................TGTGTTTAGTTCTACGACCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................GTGTTTAGTTCTACGACCGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
............CAGACTGTGTTTAGTTCTACGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
......................TTAGTTCTACGACCGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................CTGTGTTTAGTTCTACGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....................TTTAGTTCTACGACCGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..................GTGTTTAGTTCTACGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010

Generated: 05/18/2015 at 10:29 AM