dsi_18671

CDS [3l_6990776_6990784_+]; intron [3l_6990676_6990745_+]; five_prime_UTR [3l_6990746_6990775_+]; exon [3l_6990746_6990784_+]; exon [3l_6990922_6991278_+]; CDS [3l_6990922_6991167_+]; intron [3l_6990785_6990921_+]

-----------#######################################-----------------------------------------------------------------------------------------------------------------------------------------################################################## CAAATTTCCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTGCACTTTGGATATAACGTCAAATTAGTGAAAGATTGCATAAGAGGAAATTCCCATTCATTTCTCACTGTTATGGTGTTTTATATAAGTACAATATTCCCTGACTCCGACTTCCCTTTGCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA ************************************************.......(((.(((....(((......((((..(((((((((.((..(((((.(((((((........)))))...)).))))))).)))))).))).............)))).......)))...))).)))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	M053 female body	M025 embryo	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries
.........................................................................................................................................................................................CGTTCGAGGAAGCCACTGAAC...............................	21	1	1	7.00	7	4	2	1	0	0	0	0
..........................................................................................................................................................................................GTTCGAGGAAGCCACTGAACT..............................	21	0	1	3.00	3	1	0	2	0	0	0	0
.......................................................................................................................................................................................GTCGTTCGAGGAAGCCACTGAACT..............................	24	3	1	2.00	2	0	1	1	0	0	0	0
.............................................................................................................................................................................................CGAGGAAGCCACTGAACT..............................	18	0	1	2.00	2	2	0	0	0	0	0	0
.............................................................................................................................................................................................CGAGGAAGCCACTGAACTC.............................	19	0	1	2.00	2	2	0	0	0	0	0	0
......................................................................................................................................................................................................CACTGAACTCGCCAAGAAGTT..................	21	0	1	2.00	2	2	0	0	0	0	0	0
.........................................................................................................................................................................................CGTTCGAGGAAGCCACTGAA................................	20	1	1	2.00	2	1	1	0	0	0	0	0
...........................................................................................................................................................................................TTCGAGGAAGCCACTGAACT..............................	20	0	1	1.00	1	1	0	0	0	0	0	0
.................................CTAGCAACATGGTGTCGT..........................................................................................................................................................................................	18	1	1	1.00	1	0	0	1	0	0	0	0
.......................................................................................................................................................................................GTCGTTCGAGGAAGCCACTGAAC...............................	23	3	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................CCACTGAACTCGCCAAGA......................	18	0	1	1.00	1	1	0	0	0	0	0	0
..................AACAAGAATCCTATACTAGCAACATGGT...............................................................................................................................................................................................	28	0	1	1.00	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................TTCGAGGAAGCCACTGAACTCGAC..........................	24	1	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................GTTCGAGGAAGCCACTGAACG..............................	21	1	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................CACTGAACACGCCAAGAAG....................	19	1	1	1.00	1	0	0	1	0	0	0	0
.......................................................................................................................................................................................................ACTGAACTCGCCAAGAAGTT..................	20	0	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................AGGAAGCCACTGAACTCGCCAAGA......................	24	0	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................TCGAGGAAGCCACTGAACTC.............................	20	0	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................TCGAGGAAGCCACTGAACTCGCCAA........................	25	0	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................TTCTCTGACTCGGACTTCCCTTTT..........................................................	24	3	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................CGTTCGAGGAAGCCACTGAACTCGCC..........................	26	1	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................TCGCCAAGAAGTTCACCAAGAAGCCCACC..	29	0	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................CGTTCGAGGAAGCCACTGAACTCGCCAAG.......................	29	1	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................TCGAGGAAGCCACTGAACT..............................	19	0	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................TCGAGGAAGCCACTGAACTCGC...........................	22	0	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................CGTTCGAGGAAGCCACTG..................................	18	1	1	1.00	1	1	0	0	0	0	0	0
..............TACCAACAAGAATCCTATACTAGC.......................................................................................................................................................................................................	24	0	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................................................................................................AGCCACTGAACTCGCCAA........................	18	0	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................CGAGGAAGCCACTGAAC...............................	17	0	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................AGCCACTGAACTCGCCAAGAAGT...................	23	0	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................GTCGTTCGAGGAAGCCACTGAACTCGC...........................	27	3	1	1.00	1	0	1	0	0	0	0	0
............................................................................................................................................................................................TCGAGGAAGCCACTGAAC...............................	18	0	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................TTCGAGGAAGCCACTGAACTCGCC..........................	24	0	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................................................................CTGAACTCGCCAAGAAGT...................	18	0	1	1.00	1	0	0	1	0	0	0	0
..........................TCCTATACTAGCAACATGGTGTCGTT.........................................................................................................................................................................................	26	1	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................................................TGAACAGATCGAGGAAGCCCCA...................................	22	3	1	1.00	1	0	0	0	1	0	0	0
........................................................................................................................................................................................................................GTTCACGAAGAAGCCCGCCGA	21	2	1	1.00	1	0	0	0	1	0	0	0
......................................................................................................................................................................................................CACTGAACTCGCCAAGAAGT...................	20	0	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................GCCACTGAACTCGCCAAGAAGT...................	22	0	1	1.00	1	0	1	0	0	0	0	0
.............................................................................................................................................................................................................CTCGCCAAGAAGTTCACCAA............	20	0	1	1.00	1	0	1	0	0	0	0	0
.....TTCCAGCATTACCAACAAG.....................................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................CTGAACTTGCCAAGAAGTT..................	19	1	1	1.00	1	0	1	0	0	0	0	0
.............................................................................................................................................................................................CGAGGAAGCCACTGAACC..............................	18	1	2	0.50	1	1	0	0	0	0	0	0
....................................................................................................................................................................................TGAACAGGTCGAGGAAGCCCT....................................	21	3	3	0.33	1	0	0	0	1	0	0	0
...............................................................ACTTTGGATAAAACGTC.............................................................................................................................................................	17	1	5	0.20	1	0	0	0	0	0	1	0
.....................................................................................................AGAGGAAAATCCCATT........................................................................................................................	16	1	15	0.07	1	0	0	0	0	0	1	0
.........................................................................................................................................................................................AGTACGAGGACGCCACT...................................	17	2	20	0.05	1	0	0	0	0	0	0	1
.............................................................................................................................................................CCCTGACCCTGACTTCCAT.............................................................	19	3	20	0.05	1	0	0	0	0	1	0	0
...................ACAAGACTGCTATACT..........................................................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	0	1	0

GTTTAAAGGTCGTAATGGTTGTTCTTAGGATATGATCGTTGTACCACAGCCATTCATAAGACGTGAAACCTATATTGCAGTTTAATCACTTTCTAACGTATTCTCCTTTAAGGGTAAGTAAAGAGTGACAATACCACAAAATATATTCATGTTATAAGGGACTGAGGCTGAAGGGAAACGACTTGTCAAGCTCCTTCGGTGACTTGAGCGGTTCTTCAAGTGGTTCTTCGGGTGGCT ************************************************.......(((.(((....(((......((((..(((((((((.((..(((((.(((((((........)))))...)).))))))).)))))).))).............)))).......)))...))).)))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR902008 ovaries	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	GSM343915 embryo
...............................................................................................................................................TATTCATGGCATAAGGGA............................................................................	18	2	3	3.00	9	9	0	0	0	0	0	0
................................................................................................................................................ATTCATGGCATAAGGGA............................................................................	17	2	5	1.60	8	7	0	0	1	0	0	0
.............................................................................................TACCGTCTTCTCCTGTAAGGGT..........................................................................................................................	22	3	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................TTATTCATGGCATAAGGGA............................................................................	19	3	14	0.43	6	6	0	0	0	0	0	0
...................................................................................................................................................................GAGGCTGAAGGGAAT...........................................................	15	1	8	0.13	1	0	0	1	0	0	0	0
.....................................................................................................TCTCCATGACGGGTAAGTA.....................................................................................................................	19	3	16	0.06	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................................TTGAGCAGTTTTTCAAGT................	18	2	17	0.06	1	0	0	1	0	0	0	0
....................................................................................................................................................................AGGCTGAAGGGAATAGA........................................................	17	2	18	0.06	1	0	0	0	0	0	1	0
..................................................................................................................TCAGTAAAGATTGACAATAA.......................................................................................................	20	3	18	0.06	1	0	0	0	0	1	0	0
..........CGAAATGGTTGGTCTTA..................................................................................................................................................................................................................	17	2	19	0.05	1	0	0	1	0	0	0	0
....................................................................................................................................................................................................AGGTGACTGGAGAGGTTCT......................	19	3	20	0.05	1	0	0	0	0	1	0	0
.....................................................................................................................................................................GGCTGAAGGGAACCG.........................................................	15	1	20	0.05	1	0	0	0	0	1	0	0
........GCCGTCATGGTTGGTCTTA..................................................................................................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	3l:6990735-6990971 +	dsi_18671	CAA--ATTT------CCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTGCACTTTGGATATAACG------------TCAAATT-A-GTGAAAGATTGCA------------TAAGAGG----------------------------------------------------------------------------------------AAATTCCCATTCATTTCTCACTGTTAT--------------------GGT-----------------------------GTTTTATATAAGTACAATATTCC-C------------------TGACTCC-----GACTTCCCTTT--GCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droSec2	scaffold_2:7050521-7050757 +		CAA--ATTT------CCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTGCACTTTGGATATAACG------------TCAAATT-A-GTGAAAGATTGCA------------TAAGAGG----------------------------------------------------------------------------------------AAATTCCCATTCATTTCTCACTGTTAT--------------------GGT-----------------------------GTTTTATATAAGTACCAAATTCC-C------------------TGACTCC-----GACTTTCCTTT--GCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
dm3	chr3L:7124061-7124293 +		CAA--ATTT------TCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTGAGTATTCTACACTTTGGATATAACG------------TCAATTT-A-GTGAAAGATTGCA------------TAAGAGG----------------------------------------------------------------------------------------AAATTCCCAT--TTTTCACACTTTTAT--------------------GGT-----------------------------GT--TATATAAGTACAAAGTTTC-C------------------TGACTGC-----GACTTTCCTTT--GCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAACAAGTTCACCAAGAAGCCCACGGA
droEre2	scaffold_4784:4223586-4223812 -		CCA--ATTT------TCAGCACTACCAACCAGAATCCTATACTAACAACATGGTCTCGGTAAGTATTCTGCACCTTGGATATATCA------------TCAAATA-A-GTGAAAGATTGCC------------CAAAAGG----------------------------------------------------------------------------------------AATCTCCCAT--ATTATTCACTTATAT--------------------GAT-------------------------TA--------------------------CTGATTCCCATAATA-----ATCGCT-----TACCTCGCTCC--ACTGCACAGTTCGAGGAAGCCAGTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droYak3	3L:7720882-7721122 +		CCA--ATTT------TCAGCATAACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTCCACCCTGGATATATCG------------TCAAATA-A-GTGAGAGATTGCC------------TAAACGG----------------------------------------------------------------------------------------AATTTGCAAT--ATTTTTCACTTGTTT--------------------GGT-------------------------------TTTATATAAG------ATTCCTTTGATTCCTTTAATA-----AACACT-----GGCTTCGCTTT--ACTAAACAGTTTGAGGAAGCAACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droEug1	scf7180000409466:5278843-5279101 +		C-------T------TTAGCATTACCAACAAGAATCCAAACCTAACAACATGGTGTCTGTAAGTATTAAACTCTATGGATATATCT------------ATAAATT-A-TGGAGA--ATGTT------------TCAGTTA-------------------------------------AGAAA---------AAGGATT-----------ACAGTGCTTTTGATGTTTGGTATT-----------CCTTAA--------------------CTTAAGGCA--------CTATTCAATCAATAATGA--------------------------ATGATTTCCCATATA-----ATCTCT-----TATTTTCCATT--CCCCAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droBia1	scf7180000302193:6029347-6029595 +		ACC--ATCC------TTAGCAGCACCAACAGGAATCCAATTTTGACAACATGGTGTCCGTAAGTATTCTGCACCTGGGATATAA------------------ACT-G-ATAAGGGACTTAC------------CCAGCTG-------------------------------------AAAAACAAATAT-----------------------------TTAAAG---ACACTTTCTATATATATTACTGAGTTAG--------------------GATA--------GT------------------GCTAG-GACTAAGACAGCATCTT-C------------------TGA---T-----AGCTTTGTGTT--TCCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCTACCGA
droTak1	scf7180000415773:571884-572160 -		TCC--AACT------CCAGCATTACCAACAAGAATCCAATTCTGACAACATGGTGTCCGTAAGTATTTTACACGATGGATATATTA------------------A-A-CTAAGAAACTATC------------CTAACGG-------------------------------------AAAAACACAAAAACAAGGATAAACCTATTTTGATAATGAATTTAAAG---AGTTTT-----------CTTTGAGTTAG--------------------GATA--------GTCTTAAAGTAATGACGA--------------------------TAGATTCATTTAACT-----AACTGG-----GCTTTCCCATT--GTCCTGCAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droEle1	scf7180000491255:314993-315250 -		TCC--TACA------TCAGCATTACCAACAAGAATCCAATTTTGACAACATGGTCTCCGTAAGTATTCTGCACTTTGGATATAGTG------------TTAAATT-G-CTGAAAGACTGTCAAACTCAATTTTT--------------------------------------------------------------------------------G----------------------------------AGTTGGAATAAAAA----GATTTTAAAGTGTCACATCAGTCTTAAAGTAATGATTTTG------------------------GAGAGTAATTTAATT-----ATCTTA-----AATTTCCCATT--GCCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droRho1	scf7180000779994:15821-16085 +		TCT--GTTTCTTACGTCAGCATTACCAACAAGAATCCAAATCTATCAACGTGGTCTCCGTAAGTATTCTGCACTTTGGATATAACA------------ACTAGTT-A-CTGAAAGACTGACAAACTTGG---------------------------------------------------------------------------------TATTG----------------------------------AGTTGGAGTCAAAACCTTGAACTCAAAGAACTATGACAGTTCTAAAGAAATAGCTA--------------------------TTGGATCCTTAAATA-----ATCTTA-----AACTTTCCCTT--GTCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droFic1	scf7180000453839:1104682-1104790 +		GTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATA--------------------AT------TTATAATATATTCCTTACTTA-----ACCTAT-----TGTTTCCCATT--ACCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droKik1	scf7180000302391:118178-118438 -		CTT--ATCT------GCAGCATTACCAACAAGAATCCAGATCAAACAACATGGTGTCCGTAAGTATTAAACCTTCAGGATAG--CGGCTATAGTTACATCACGTTTGCTTGAAAGTTAAACAAACCT------CAACAAGAAAATAATGAGGCTTAGGTTTTGTTAATAAACGATATAAAATTCT----------------------------------------------------------------------------------------------------------TATAAA----A-------------------------------------TTTAATA-----ATCTCT-----AATTTCCCTTTTCTCCCAACAGTTCGAAGAAGCTACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droAna3	scaffold_13337:1655159-1655329 +		TTA--ACTTC--AATATAGCGTTAAAAAGAAGAATCCAAATCTTACAAAATGGTGTCTGTAAGTATTCTAGA----------------------------------------------------------------------------------------------------------AAAATAATTCT-----------------------------GT------------------------------------------------------------------------ATA-G----AATTCG---------------------------------TTTACAATTT-----TT-----CG--CTTAATT--TATAAACAGTTTGAGGAAGCTACTGAACTCGCCAAGAAGTTCTCCAAGAAGCCCACCGA
droBip1	scf7180000396544:439632-439797 -		GAA-----T------ATAGCGTTAAAAAGAAGAATCTAAAACTTACAAAATGGTGTCTGTAAGTATTTTAAA-----------------------------------------AGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGTTTTAAAGG----ATTTTG---------------------------------TTAAGAATTT-----T------TTCTTATATTT--TTCTTATAGTTTGAGGAAGCTACTGAACTCGCCAAGAAGTTCTCCAAGAAGCCCACCGA
dp5	XR_group6:2312268-2312435 -		GAATTACTT------GCAGCACTACTAGCAAAACCACAGAACTAACAACATGGTGTCCGTAAGTA------------------------------------AATA-A-GTCATAGA--------------------------------------------------------------TAAATAT----------------------------------------------------------------------------------------------------------TACAAG----AT--------------------------------------TGATA-----AGTTAT-----GGATCTCGATG--TTTAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droPer2	scaffold_9:602175-602347 -		GAATTACTT------GCAGCACTACTAGCAAAACCACAGAACTAACAACATGGTGTCCGTAAGTA------------------------------------AATA-A-ATCATAGA--------------------------------------------------------------TAAATAT----------------------------------------------------------------------------------------------------------TACAAG----AT---------------------------------TCGGTTGATC-----AGTTAT-----GGATCTCGATG--TTTAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA
droWil2	scf2_1100000004511:9435986-9436052 -		T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTT--TTTGCGCAGTTTGAAGAAATCGTTGAGAAGGCCAAGAACTTCAGCAAGGTTCCCAGCAA
droVir3	scaffold_13049:6460216-6460307 -		ATA--ATAT------TCCTAAT-------CATATTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTATTG--CCTTTGCAGTTCGATGCAATTTGCGAAAAGTCCAAGGCCTTCAGCAGCAAGCCGCCAAA
droMoj3	scaffold_6680:10949947-10949996 -		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGTAAGGTTTTGAACTCGCCAAGAAGTTCTCTAAGAAGCCCAAAGA
droGri2	scaffold_9452:5271-5362 -		AAT--ACAA------TATGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGATTCGCATTTATTG--ACTTTACAGTTCGAGGCAATTTGCGAAAAGTCCAAGGCCTTCAGCACCAAGCCACCAAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CAA--ATTT------CCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTGCACTTTGGATATAACG------------TCAAATT-A-GTGAAAGATTGCA------------TAAGAGG----------------------------------------------------------------------------------------AAATTCCCATTCATTTCTCACTGTTAT--------------------GGT-----------------------------GTTTTATATAAGTACAATATTCC-C------------------TGACTCC-----GACTTCCCTTT--GCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAACT..............................	21	1	3.00	3	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCCACTGAACT..............................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCCACTGAACTC.............................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CACTGAACTCGCCAAGAAGTT..................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGAAGCCACTGAACT..............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CTAGCAACATGGTGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CCACTGAACTCGCCAAGA......................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AACAAGAATCCTATACTAGCAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAACG..............................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACTCGCCAAGAAGTT..................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AGGAAGCCACTGAACTCGCCAAGA......................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAACTC.............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAACTCGCCAA........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGAAGTTCACCAAGAAGCCCACC..	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAACT..............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAACTCGC...........................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................TACCAACAAGAATCCTATACTAGC....................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCACTGAACTCGCCAA........................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCCACTGAAC...............................	17	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCACTGAACTCGCCAAGAAGT...................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAAC...............................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGAAGCCACTGAACTCGCC..........................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGT...................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CACTGAACTCGCCAAGAAGT...................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGAACTCGCCAAGAAGT...................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCACCAA............	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TT------CCAGCATTACCAACAAG..................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCCACTGAACC..............................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CAA--ATTT------CCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTGCACTTTGGATATAACG------------TCAAATT-A-GTGAAAGATTGCA------------TAAGAGG----------------------------------------------------------------------------------------AAATTCCCATTCATTTCTCACTGTTAT--------------------GGT-----------------------------GTTTTATATAAGTACCAAATTCC-C------------------TGACTCC-----GACTTTCCTTT--GCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.................................ATCCTATACTAGCAACATGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	2	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAAC...............................	20	1	2.00	2	0	1	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCACTGAACTCGCCAAGAAG....................	23	1	1.00	1	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAACT..............................	19	1	1.00	1	1	0	0	0
........................................ACTAGCAACATGGTGTCG........................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.........................CAACAAGAATCCTATACTAGCAACATGG.............................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAACT..............................	21	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCACCAAGAAGCCCACC..	28	1	1.00	1	0	0	1	0
....................................CTATACTAGCAACATGGTGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGTTCGAGGAAGCCACTGA.................................	19	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCACCAAGAAGCCCACC..	21	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGAAGTTCACCAAG...........	20	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGAAGCCACTGAAC...............................	19	1	1.00	1	0	0	1	0
..........................AACAAGAATCCTATACTAG.....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCAAGAAGCCCACCGA	21	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGA.................................	18	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAAC...............................	18	1	1.00	1	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCCACTGAACTCGCCAAGA......................	23	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCCACTGAACTCGC...........................	21	1	1.00	1	0	0	1	0
..............................AGAATCCTATACTAGCAACATGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0
.............................AAGAATCCTATACTAGCAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCACCAAG...........	21	1	1.00	1	0	1	0	0

dm3

CAA--ATTT------TCAGCATTACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTGAGTATTCTACACTTTGGATATAACG------------TCAATTT-A-GTGAAAGATTGCA------------TAAGAGG----------------------------------------------------------------------------------------AAATTCCCAT--TTTTCACACTTTTAT--------------------GGT-----------------------------GT--TATATAAGTACAAAGTTTC-C------------------TGACTGC-----GACTTTCCTTT--GCTGAACAGTTCGAGGAAGCCACTGAACTCGCCAACAAGTTCACCAAGAAGCCCACGGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAAGCCACTGAACT..............................	19	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAACTCGCC..........................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCAAGAAGCCCACGGA	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAACT..............................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCACTGAA................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGAAGCCACTGAACT..............................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGAACTCGCCAACA......................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAGGAAGCCACTGAACTCGCCA.........................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGCCACTGAACATC............................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CCA--ATTT------TCAGCACTACCAACCAGAATCCTATACTAACAACATGGTCTCGGTAAGTATTCTGCACCTTGGATATATCA------------TCAAATA-A-GTGAAAGATTGCC------------CAAAAGG----------------------------------------------------------------------------------------AATCTCCCAT--ATTATTCACTTATAT--------------------GAT-------------------------TA--------------------------CTGATTCCCATAATA-----ATCGCT-----TACCTCGCTCC--ACTGCACAGTTCGAGGAAGCCAGTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCCAAGAAGTTCACCAAGA..........	23	1	1.00	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCAGTGAACTCGCC..........................	18	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCACCA.............	19	1	1.00	1	0	0	0	0	0	1	0
..................................TCCTATACTAACAACATGGTCT..........................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGGAAGCCAGTGAACT..............................	21	1	1.00	1	0	0	0	0	0	1	0

droYak3

CCA--ATTT------TCAGCATAACCAACAAGAATCCTATACTAGCAACATGGTGTCGGTAAGTATTCTCCACCCTGGATATATCG------------TCAAATA-A-GTGAGAGATTGCC------------TAAACGG----------------------------------------------------------------------------------------AATTTGCAAT--ATTTTTCACTTGTTT--------------------GGT-------------------------------TTTATATAAG------ATTCCTTTGATTCCTTTAATA-----AACACT-----GGCTTCGCTTT--ACTAAACAGTTTGAGGAAGCAACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACTCGCCAAGAAGT...................	20	1	7.00	7	0	0	0	1	0	0	6	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCAACTGAACTCGCCAAGAAGT...................	23	1	6.00	6	0	0	0	0	0	0	6	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCACCAAG...........	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAAGCAACTGAAC...............................	19	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTTGAGGAAGCAACTGAACT..............................	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGTT..................	19	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...................................CCTATACTAGCAACATGGTGT..........................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGT...................	18	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
......................................ATACTAGCAACATGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCAAGAAGCCCACCGA	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCAACTGAACTCGCCAAGAAGT...................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAACTGAACTCGCCAAGAAGTT..................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCAACTGAACTCGCCAAG.......................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................A-GTGAGAGATTGCC------------TAAACGG----------------------------------------------------------------------------------------A.............................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACTCGCCAAGAAGTT..................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACTCGCCAAGAAGTT..................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACTCGCCAAGAAGTTCACCAAG...........	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGAAGCAACTGAACTCGCCAAG.......................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCAACTGAACTCGCCAAGAAGT...................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCCAAGAAGTTCACC..............	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................AACTGAACTCGCCAAGAAG....................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCCAAGAAGTTCACCAAG...........	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCACCAAGAAGCCCACC..	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAAGCAACTGAACTCGCCAAGAAGT...................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................ATCCTATACTAGCAACATGGTGT..........................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCAACTGAACTCGCCAAG.......................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAACTGAACTCGCCAAGAAGT...................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................AACAAGAATCCTATACTAGCA...................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCAACTGAACTCGCCAAGAAGTT..................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CAACTGAACTCGCCAAGAAGTTCACC..............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................ATACTAGCAACATGGTGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................AATCCTATACTAGCAACATGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................ATCCTATACTAGCAACATGGTGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCAACTGAACTCGCCAAGAAGTTCACC..............	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGAAGTTCACCAAG...........	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................CATAACCAACAAGAATCCTATA.........................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................ATCCTATACTAGCAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGAAGCAACTGAACTC.............................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGAAGCAACTGAACTCGCCAAGAA.....................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CAACTGAACTCGCCAAGAAGT...................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGCCAAGAAGTTCAC...............	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

C-------T------TTAGCATTACCAACAAGAATCCAAACCTAACAACATGGTGTCTGTAAGTATTAAACTCTATGGATATATCT------------ATAAATT-A-TGGAGA--ATGTT------------TCAGTTA-------------------------------------AGAAA---------AAGGATT-----------ACAGTGCTTTTGATGTTTGGTATT-----------CCTTAA--------------------CTTAAGGCA--------CTATTCAATCAATAATGA--------------------------ATGATTTCCCATATA-----ATCTCT-----TATTTTCCATT--CCCCAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ACC--ATCC------TTAGCAGCACCAACAGGAATCCAATTTTGACAACATGGTGTCCGTAAGTATTCTGCACCTGGGATATAA------------------ACT-G-ATAAGGGACTTAC------------CCAGCTG-------------------------------------AAAAACAAATAT-----------------------------TTAAAG---ACACTTTCTATATATATTACTGAGTTAG--------------------GATA--------GT------------------GCTAG-GACTAAGACAGCATCTT-C------------------TGA---T-----AGCTTTGTGTT--TCCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCTACCGA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCC--AACT------CCAGCATTACCAACAAGAATCCAATTCTGACAACATGGTGTCCGTAAGTATTTTACACGATGGATATATTA------------------A-A-CTAAGAAACTATC------------CTAACGG-------------------------------------AAAAACACAAAAACAAGGATAAACCTATTTTGATAATGAATTTAAAG---AGTTTT-----------CTTTGAGTTAG--------------------GATA--------GTCTTAAAGTAATGACGA--------------------------TAGATTCATTTAACT-----AACTGG-----GCTTTCCCATT--GTCCTGCAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCC--TACA------TCAGCATTACCAACAAGAATCCAATTTTGACAACATGGTCTCCGTAAGTATTCTGCACTTTGGATATAGTG------------TTAAATT-G-CTGAAAGACTGTCAAACTCAATTTTT--------------------------------------------------------------------------------G----------------------------------AGTTGGAATAAAAA----GATTTTAAAGTGTCACATCAGTCTTAAAGTAATGATTTTG------------------------GAGAGTAATTTAATT-----ATCTTA-----AATTTCCCATT--GCCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCT--GTTTCTTACGTCAGCATTACCAACAAGAATCCAAATCTATCAACGTGGTCTCCGTAAGTATTCTGCACTTTGGATATAACA------------ACTAGTT-A-CTGAAAGACTGACAAACTTGG---------------------------------------------------------------------------------TATTG----------------------------------AGTTGGAGTCAAAACCTTGAACTCAAAGAACTATGACAGTTCTAAAGAAATAGCTA--------------------------TTGGATCCTTAAATA-----ATCTTA-----AACTTTCCCTT--GTCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATA--------------------AT------TTATAATATATTCCTTACTTA-----ACCTAT-----TGTTTCCCATT--ACCAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CTT--ATCT------GCAGCATTACCAACAAGAATCCAGATCAAACAACATGGTGTCCGTAAGTATTAAACCTTCAGGATAG--CGGCTATAGTTACATCACGTTTGCTTGAAAGTTAAACAAACCT------CAACAAGAAAATAATGAGGCTTAGGTTTTGTTAATAAACGATATAAAATTCT----------------------------------------------------------------------------------------------------------TATAAA----A-------------------------------------TTTAATA-----ATCTCT-----AATTTCCCTTTTCTCCCAACAGTTCGAAGAAGCTACTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TTA--ACTTC--AATATAGCGTTAAAAAGAAGAATCCAAATCTTACAAAATGGTGTCTGTAAGTATTCTAGA----------------------------------------------------------------------------------------------------------AAAATAATTCT-----------------------------GT------------------------------------------------------------------------ATA-G----AATTCG---------------------------------TTTACAATTT-----TT-----CG--CTTAATT--TATAAACAGTTTGAGGAAGCTACTGAACTCGCCAAGAAGTTCTCCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........................................................................................................................................................................................................................................................................................................................................................................................................CTACTGAACTCGCCAAGAAGT...................	21	1	4.00	4	2	0	0	0	2	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTCTCCAAGAAGCCCAC...	21	1	2.00	2	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACTCGCCAAGAAGT...................	20	1	2.00	2	0	0	0	0	2	0
..A--ACTTC--AATATAGCGTTAAAAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0
................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGCCAAGAAGTTCTCCAAGA..........	24	1	2.00	2	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGCCAAGAAGTTCTCCAAG...........	23	1	1.00	1	1	0	0	0	0	0
......CTTC--AATATAGCGTTAAAAAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACTCGCCAAGAAGTTCTCCAAG...........	28	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCTCCAAGAAGCCCAC...	27	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCCAAGAAGCCCACC..	19	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAAGCTACTGAACT..............................	20	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCTACTGAACTCGCCAAGAAGTT..................	23	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTCCAAGAAGCCCACCGA	22	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGAAGCTACTGAAC...............................	19	1	1.00	1	0	0	0	0	1	0
......CTTC--AATATAGCGTTAAAAAGAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCTACTGAACTCGCCAAGAAGT...................	23	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGAAGCTACTGAACT..............................	19	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCTCCAAG...........	19	1	1.00	1	1	0	0	0	0	0
....................GTTAAAAAGAAGAATCCAAATC........................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
........................................TCTTACAAAATGGTGTCT........................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCTACTGAACTCGCCAAG.......................	18	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGCCAAGAAGTTCTCC..............	20	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCTCCAAGAAGCC......	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTCCAAGAAGCCCAC...	19	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCTCCAAGA..........	20	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGTTCTCCAAGAAGCCCACC..	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCTACTGAACTCGCCAAGAA.....................	21	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCTCCAAGAAGCC......	24	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCTCCAAGAAGCCCACC..	21	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CTACTGAACTCGCCAAGA......................	18	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCTCCAA............	18	1	1.00	1	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACTCGCCAAGAAG....................	19	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACTCGCCAAGAAGTT..................	21	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACTCGCCAAGAAGTTCTCCAAGA..........	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTCCAAGAAGCCCACC..	20	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTTCTCCAAGAAGCCCACC..	23	1	1.00	1	1	0	0	0	0	0
....................GTTAAAAAGAAGAATCCAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAAGTTCTCCAAGAAGCCCACC..	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGTTCTCCAAGAAGCCCA....	22	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGTT..................	19	1	1.00	1	0	0	0	0	1	0

droBip1

GAA-----T------ATAGCGTTAAAAAGAAGAATCTAAAACTTACAAAATGGTGTCTGTAAGTATTTTAAA-----------------------------------------AGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGTTTTAAAGG----ATTTTG---------------------------------TTAAGAATTT-----T------TTCTTATATTT--TTCTTATAGTTTGAGGAAGCTACTGAACTCGCCAAGAAGTTCTCCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total
No Reads

dp5

GAATTACTT------GCAGCACTACTAGCAAAACCACAGAACTAACAACATGGTGTCCGTAAGTA------------------------------------AATA-A-GTCATAGA--------------------------------------------------------------TAAATAT----------------------------------------------------------------------------------------------------------TACAAG----AT--------------------------------------TGATA-----AGTTAT-----GGATCTCGATG--TTTAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTGAACTCGCCAAGAAGTT..................	23	1	6.00	6	0	6	0	0	0	0	0	0	0	0
..........................AGCAAAACCACAGAACTAAC....................................................................................................................................................................................................................................................................................................................................................................................................	20	1	5.00	5	0	5	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAACT..............................	20	1	4.00	4	0	3	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTGAACTCGCCAAGA......................	19	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGAAGCCTCTGAACT..............................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAA........................	20	1	3.00	3	0	2	0	0	1	0	0	0	0	0
..........................AGCAAAACCACAGAACTAA.....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAA.....................	23	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAAGTT..................	26	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAAGTT..................	27	1	3.00	3	0	2	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAAGT...................	25	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................GAACTAACAACATGGTGTCCT.......................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAAGTT..................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CCTCTGAACTCGCCAAGAA.....................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................AGCAAAACCACAGAACTAACAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCCAAGAAGTTCACCAAGA..........	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCACCAAGA..........	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGA......................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAG.......................	20	1	2.00	2	0	1	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCCTCTGAACTCGCCAAGAAGT...................	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CCTCTGAACTCGCCAAGAAGT...................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACT..............................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	2
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGAA.....................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGAAGTT..................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAA.....................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................GCACTACTAGCAAAACCACAGA..........................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAAC...............................	19	1	2.00	2	1	1	0	0	0	0	0	0	0	0
........................CTAGCAAAACCACAGAACTAAC....................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGAAGCCTCTGAACTCGCCAAGAA.....................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................AAAACCACAGAACTAACAACATGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCAAGAAGCCCACC..	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.......................ACTAGCAAAACCACAGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGCCAAGAAGTTCACCAAGAAGCC......	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAAGA......................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGAAGT...................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................AAAACCACAGAACTAACAACATGGTGTCC........................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCCAAGAAGTTCACCAAG...........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................GAACTCGCCAAGAAGTTCACCA.............	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................AACCACAGAACTAACAACATGGTGTCCT.......................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTGAACTCGCCAAGAAGTT..................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................AAACCACAGAACTAACAACATGGTGT..........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTGAACTCGCCAAGAA.....................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGA......................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................GCAAAACCACAGAACTAACAACA................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................CTACTAGCAAAACCACAGAACTA......................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................AGCAAAACCACAGAACTAACAACATGG.............................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAAGT...................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................GCACTACTAGCAAAACCACAGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCA.........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCC..........................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCC..........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................GCACTACTAGCAAAACCAC.............................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................CAGCACTACTAGCAAAACCACAGAAC........................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................AAACCACAGAACTAACAACAT...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................AAACCACAGAACTAACAACATGGTGTCC........................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCAAGAAGCCCACCG.	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................ACCACAGAACTAACAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................AACCACAGAACTAACAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTGAACTCGCCAAG.......................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................CACAGAACTAACAACATGGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAAGTTCACCAAGA..........	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................CTACTAGCAAAACCACAGAACTAAC....................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAAGT...................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTGAACTCGCCAAGAAGT...................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTTCACCAAGAAGCCCACC..	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................GAACTAACAACATGGTGTCC........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAAG.......................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTGAACTCGCCAAGA......................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGAAG....................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTC.............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTGAACTCGCCAAGAA.....................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGAAGTTCACCAAGA..........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTCGCCAAGAAGT...................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................AAACCACAGAACTAACAACATGG.............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCACCAAGAAGCCCAC...	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGAAGTTCACCA.............	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
............................................ACAACATGGTGTCCGTAAGT..................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGT...................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTGAACTCGCCAAGAAGTTCACCA.............	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGA......................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGAAGTTCAC...............	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..................................CACAGAACTAACAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACCAAGAAGCCCAC...	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................AGCAAAACCACAGAACTAACAACAT...............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAG.......................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTGAACTCGCCAAGAAGTTC.................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GAATTACTT------GCAGCACTACTAGCAAAACCACAGAACTAACAACATGGTGTCCGTAAGTA------------------------------------AATA-A-ATCATAGA--------------------------------------------------------------TAAATAT----------------------------------------------------------------------------------------------------------TACAAG----AT---------------------------------TCGGTTGATC-----AGTTAT-----GGATCTCGATG--TTTAAACAGTTCGAAGAAGCCTCTGAACTCGCCAAGAAGTTCACCAAGAAGCCCACCGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACT..............................	18	1	34.00	34	34	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAAGTT..................	26	1	11.00	11	11	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAAGTT..................	27	1	10.00	10	10	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAACT..............................	20	1	9.00	9	9	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAAGAAGT...................	29	1	7.00	7	7	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGTT..................	19	1	7.00	7	6	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAA.....................	23	1	6.00	6	6	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCC..........................	19	1	6.00	6	6	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCC..........................	18	1	6.00	6	6	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAAGT...................	25	1	5.00	5	5	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAAGTT..................	21	1	5.00	5	5	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTCGCCAAGAAGT...................	18	1	5.00	5	5	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAAGAA.....................	27	1	5.00	5	4	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAA........................	24	1	5.00	5	5	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAA.....................	18	1	4.00	4	4	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGC...........................	18	1	4.00	4	4	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAAC...............................	19	1	4.00	4	4	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGA......................	23	1	3.00	3	3	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAA.....................	24	1	3.00	3	2	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGAAGCCTCTGAACTCGCCAAGAA.....................	28	1	3.00	3	3	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAA................................	18	1	3.00	3	3	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAACTCGCCA.........................	25	1	3.00	3	3	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAACTCGCCAAGA......................	28	1	3.00	3	3	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAAG.......................	25	1	3.00	3	3	0	0	0	0	0
.....................CTACTAGCAAAACCACAGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	2	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAAGT...................	26	1	3.00	3	3	0	0	0	0	0
..................................CACAGAACTAACAACATGGT............................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGCCTCTGAACTCGCCAAGAAGTT..................	29	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCA.........................	18	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTCGCCAAGAAGTT..................	20	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGAACTCGCCAAGAAGT...................	19	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAAGT...................	20	1	2.00	2	0	0	0	0	0	2
....................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCCTCTGAACTCGCC..........................	20	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CCTCTGAACTCGCCAAGAAGT...................	21	1	2.00	2	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAACTCGCCAAGAAGTTC.................	22	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCC..........................	22	1	2.00	2	1	1	0	0	0	0
...............GCAGCACTACTAGCAAAACCACAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
....................................CAGAACTAACAACATGGTGTCC........................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
........................CTAGCAAAACCACAGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAACTCGCC..........................	24	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCG............................	20	1	2.00	2	2	0	0	0	0	0
..........................AGCAAAACCACAGAACTAA.....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCACCAA............	18	1	1.00	1	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGG......................	23	1	1.00	1	1	0	0	0	0	0
..................................CACAGAACTAACAACATGGTGTCC........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAAGAAG....................	25	1	1.00	1	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACC..............................	18	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCTGAACTCGCCAAGAAGTTCACC..............	28	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGAAGCCTCTGAACTCGCCAAG.......................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCCTCTGAACTCG............................	18	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGCCTCTGAACTCGCCAAGAAGTT..................	28	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAAGCCTCTGAACTCGCCAAGAAGG...................	29	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAG.......................	21	1	1.00	1	0	1	0	0	0	0
.............................AAAACCACAGAACTAACAACATGG.............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGAAGCCTCTGAACT..............................	19	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCACCAAG...........	19	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTCTGAACTCGCCAAGAAGTT..................	25	1	1.00	1	1	0	0	0	0	0
..........................AGCAAAACCACAGAACTAAC....................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CCTCTGAACTCGCCAAGA......................	18	1	1.00	1	1	0	0	0	0	0
.........................TAGCAAAACCACAGAACT.......................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCCTCTGAACTCGCCAA........................	21	1	1.00	1	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGAAGCCTCTGAACTCGCCAAGAA.....................	29	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGAAGTTC.................	27	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGAAGTTCACCAAGA..........	20	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCTCTGAACTCGCCAAGA......................	22	1	1.00	1	1	0	0	0	0	0

droWil2

T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTT--TTTGCGCAGTTTGAAGAAATCGTTGAGAAGGCCAAGAACTTCAGCAAGGTTCCCAGCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAGAACTTCAGCAAGGTTCCCAGC..	28	1	3.00	3	0	3	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTGAGAAGGCCAAGAACTTCAGC..............	27	1	2.00	2	0	1	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATCGTTGAGAAGGCCAAGAACTT..................	29	1	2.00	2	0	0	2	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAAATCGTTGAGAAGGCC..........................	23	1	2.00	2	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACTTCAGCAAGGT.........	18	1	2.00	2	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAAGGCCAAGAACTT..................	20	1	2.00	2	0	1	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAGAACTTCAGCAAGGT.........	21	1	2.00	2	0	2	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCAAGAACTTCAGCAAGGT.........	23	1	2.00	2	2	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCGTTGAGAAGGCCAAG.......................	22	1	2.00	2	0	0	2	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTGAGAAGGCCAAGA......................	20	1	2.00	2	0	0	1	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAAATCGTTGAGAAGGC...........................	21	1	2.00	2	0	0	2	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGAAGGCCAAGAACTTCAGC..............	25	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAACTTCAGCAAGGTTCCC.....	24	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTGAGAAGGCCAAGAACTTC.................	25	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGCAAGGTTCCCAG...	18	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATCGTTGAGAAGGCCAAGAAC....................	27	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAAATCGTTGAGAAGGCCAA........................	24	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAAATCGTTGAGAAGGCCAA........................	25	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGGCCAAGAACTTCAGCAAGGT.........	26	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTGAGAAGGCCAAGA......................	19	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACTTCAGCAAGGTTCCCAGC..	25	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGGCCAAGAACTTCAGCAAGGT.........	27	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGAGAAGGCCAAGAACTTC.................	23	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAAATCGTTGAGAAGGC...........................	23	1	1.00	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................AAGAAATCGTTGAGAAGGC...........................	19	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................................TTTTT--TTTGCGCAGTTTGAAGAAATCGT....................................	28	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAGAACTTCAGCAAG...........	19	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTGAGAAGGCCAAGAA.....................	20	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGGCCAAGAACTTCAGCAAGG..........	26	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTGAGAAGGCCAAGAACTT..................	24	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAAATCGTTGAGAAGGC...........................	22	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAAGGCCAAGAAC....................	18	1	1.00	1	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAACTTCAGCAAGGTTCCCAGC..	27	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCGTTGAGAAGGCCAAGAAC....................	25	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCAAGAACTTCAGCAAGGTTCCCA....	28	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAAATCGTTGAGAAG.............................	21	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATCGTTGAGAAGGCCAA........................	23	1	1.00	1	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTGAGAAGGCCAAGAAC....................	22	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCAGCAAGGTTCCCA....	18	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACTTCAGCAAGGTTCCC.....	22	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAAGAACTTCAGCAAGGTTCCC.....	25	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTGAGAAGGCCAAG.......................	19	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTTGAGAAGGCCAAGAACT...................	24	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATCGTTGAGAAGGC...........................	20	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTTGAGAAGGCCAAGA......................	21	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGGCCAAGAACTTC.................	19	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAATCGTTGAGAAGGCCAAGAACTT..................	26	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGAAGGCCAAGAACTTCAGCA.............	26	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AAGAAATCGTTGAGAAGGCCA.........................	21	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GAAATCGTTGAGAAGGCCAAGAA.....................	23	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAAATCGTTGAGA...............................	19	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTGAGAAGGCCAAGC......................	19	2	0.50	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAAATCGTTGAGAA..............................	18	3	0.33	1	0	1	0	0	0

droVir3

ATA--ATAT------TCCTAAT-------CATATTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTATTG--CCTTTGCAGTTCGATGCAATTTGCGAAAAGTCCAAGGCCTTCAGCAGCAAGCCGCCAAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................TTCGATGCAATTTGCGAAA...............................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCGAAAAGTCCAAGGC.....................	21	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGCCTTCAGCAGC...........	19	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................CAATTTGCGAAAAGTCCAAGGCC....................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAAGTCCAAGGCCTTCAGC..............	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGAAAAGTCCAAGGCCT...................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGAAAAGTCCAAGGCCTT..................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGCGAAAAGTCCAAGGC.....................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGGCCTTCAGCAGCA..........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGTCCAAGGCCTTC.................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGCCTTCAGCAGCAA.........	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................CAATTTGCGAAAAGTCCAAGGC.....................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGCCTTCAGCAGCAAGC.......	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAAAGTCCAAGGCCTTCAGCAG............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAAAGTCCAAGGCCTTCAGCA.............	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGTAAGGTTTTGAACTCGCCAAGAAGTTCTCTAAGAAGCCCAAAGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

AAT--ACAA------TATGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGATTCGCATTTATTG--ACTTTACAGTTCGAGGCAATTTGCGAAAAGTCCAAGGCCTTCAGCACCAAGCCACCAAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGCCTTCAGCACCA..........	19	2	1.50	3	3	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGCCTTCAGCACC...........	19	2	1.50	3	3	0
...................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGGCCTTCAGCACCAAGC.......	24	2	1.00	2	2	0
......................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGCCTTCAGCACCAA.........	19	2	0.50	1	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCTTCAGCACCAAGC.......	19	2	0.50	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGCGAAAAGTCCAAGGCCTTC.................	22	2	0.50	1	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGAAAAGTCCAAGGCC....................	21	2	0.50	1	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGGCCTTCAGCACCA..........	21	2	0.50	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGCGAAAAGTCCAAGGCC....................	19	2	0.50	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGCGAAAAGTCCAAGGC.....................	18	2	0.50	1	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGCCTTCAGCACCAAGCC......	23	2	0.50	1	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................GCAATTTGCGAAAAGTCCAAGGCC....................	24	2	0.50	1	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGGCCTTCAGCACCAAG........	23	2	0.50	1	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCCAAGGCCTTCAGCACCAAG........	26	2	0.50	1	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGCCTTCAGCACCAA.........	20	2	0.50	1	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGGCCTTCAGCACCAA.........	22	2	0.50	1	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................TGCGAAAAGTCCAAGGCC....................	18	2	0.50	1	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGCACCAAGCCACCAAA	21	2	0.50	1	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGTCCAAGGCCTTCAGCA.............	22	2	0.50	1	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGGCCTTCAGCACCAAGC.......	22	2	0.50	1	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCCAAGGCCTTCAGCAC............	22	2	0.50	1	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGCCTTCAGCACCAAGC.......	23	2	0.50	1	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCGAAAAGTCCAAGGCCTTCAG...............	27	2	0.50	1	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGGCCTTCAGCACCA..........	20	2	0.50	1	1	0

dsi_18671

3l:6990785-6990921 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads