ID:

dsi_18654

 Coordinate:

3r:25834-25983 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.7 -8.6 -8.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
mature
star
  1. dsi_18654  3r:25897-25920 +
  2. node_36225:380-403 -
  3. node_4721:7886-7909 -

Sense Strand Reads

TAAGTGGCAGAATGATCTTGCGGTGATGTGAAATAAACATCAATAGACCAGTGAGTAAACTATTTTTTCCCTTAGTAAATAAGATCTTTTTTAAAACAGAAGAGAATGCTATAGTCGATTTCCCCGAATATCAGATACCCGTTACTCAGCTAGTGGGAATGCGAAGGCGAAACTTAATCATAATTTCTCTGGGATATCGATATATTTATTTTAGTTGCGGAATAAAATAAGAAAAAATTTCAAAAATGTA
*****************************************************************************************************************.(((..(((((............((..(((....)))..)))))))..)))......******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
..................................................................................................................................TCAGATACCCGTTAATCAGCTAGTTGG............................................................................................. 27 2 20 1.15 23 0 0 0 1 18 0 0 4 0
.............................................................................................................................................................................................................TTATTTTAGTTGCGGAATAAAATAAGA.................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................TTAGTTGCGGAATAAAATAAGAAAAAA............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TCAGCTAGTGGGAATGCGAAGGCTA................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0
.....GGCAGAATGATCTTGCGGTGAT............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................TATTTTTTGCCTTAGTAAATGAGATCA................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TACTCAGCTAGTGGGAATGCGAAGGCGA................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................GTTACTCAGCTAGTGGGAATGCGAAGG................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................CGTTACTCAGCTAGTGGGAATGCG....................................................................................... 24 0 6 1.00 6 0 0 0 0 0 6 0 0 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGAATGCG....................................................................................... 25 0 6 0.83 5 4 0 1 0 0 0 0 0 0
......................................................................................................................................................TAGTGTGAATGCGAAGGCGAAACT............................................................................ 24 1 6 0.50 3 0 0 0 3 0 0 0 0 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGAATGCGAA..................................................................................... 27 0 6 0.33 2 0 0 2 0 0 0 0 0 0
.................................................................................................................GTCGATTTCCCCGAATATCAGATA................................................................................................................. 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGAATG......................................................................................... 23 0 9 0.33 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGAATGC........................................................................................ 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TACTCAGCTAGTGGGAATGCGAA..................................................................................... 23 0 8 0.25 2 0 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TGGGATATCGATATAT............................................. 16 0 14 0.21 3 3 0 0 0 0 0 0 0 0
TAAGTGGCAGAGTGGCCTTG...................................................................................................................................................................................................................................... 20 3 10 0.20 2 0 0 0 1 0 0 0 1 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGAATGCGA...................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................TCAGATACCCGTTACTCAGCTAGTGG.............................................................................................. 26 0 20 0.15 3 0 0 0 0 3 0 0 0 0
..............................................................................................................................................TACTCAGCTAGTGGGAATGCGA...................................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................TCAGATACCCGTTACTCAGCTAGTG............................................................................................... 25 0 20 0.10 2 0 0 0 0 1 0 0 1 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGAA........................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TGCTATAGTCGATTTCCCC............................................................................................................................. 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TCAGCTAGTGGGAATG......................................................................................... 16 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................ATTTCCCCCAAGATCAGGTA................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 0 0 1 0
.......................................................................................................GAATGCTATAGTCGATT.................................................................................................................................. 17 0 11 0.09 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CCGTTACTCAGCTAGTGGGA............................................................................................ 20 0 13 0.08 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................ATATCAGATACCCGTTACTCAGCT................................................................................................... 24 0 14 0.07 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GGCGAAACCTGATCAGAAT.................................................................. 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0
............................................AGACGAGTGAGTAACCT............................................................................................................................................................................................. 17 2 16 0.06 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTTAGTTTCGGAAAAAAAT...................... 19 2 16 0.06 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................TAGTTGTGGAATAAAAAAA.................... 19 2 19 0.05 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................TCAGATACCCGTTACTCAG..................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................TGCGGTGATCTGAAGAAAA..................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................TGCGGAATAGAATAAAAAAAAAA............ 23 3 20 0.05 1 0 0 0 0 0 0 0 0 1
..................................................................................................................................TCAGATACCCGTTACTCAGCT................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................TAGTGGGAATGCGAA..................................................................................... 15 0 20 0.05 1 0 0 0 1 0 0 0 0 0
................................................................................................................................TATCAGATACCCGTTACTCAGC.................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................TCATAATTTCTCTGGGATATCGATAGA.............................................. 27 1 20 0.05 1 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................GATACGGATATATTTATT........................................ 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATTCACCGTCTTACTAGAACGCCACTACACTTTATTTGTAGTTATCTGGTCACTCATTTGATAAAAAAGGGAATCATTTATTCTAGAAAAAATTTTGTCTTCTCTTACGATATCAGCTAAAGGGGCTTATAGTCTATGGGCAATGAGTCGATCACCCTTACGCTTCCGCTTTGAATTAGTATTAAAGAGACCCTATAGCTATATAAATAAAATCAACGCCTTATTTTATTCTTTTTTAAAGTTTTTACAT
********************************************************************************.(((..(((((............((..(((....)))..)))))))..)))......***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 M025
embryo
 SRR902009
testis
 SRR902008
ovaries
.................................................................................................................................TAGTCTATGGGCAATGAGTCGAT.................................................................................................. 23 0 20 8.10 162 162 0 0 0 0 0 0 0 0 0
........................................................................................................................AGGGGCTTATAGTCTATGGGCAATGAGT...................................................................................................... 28 0 5 1.20 6 0 0 2 0 3 0 1 0 0 0
.....................................................................................................CTCTTACGATATCAGCTAAAGGGGC............................................................................................................................ 25 0 5 1.20 6 0 0 0 1 0 1 1 3 0 0
...............................................................................................................................TATAGTCTATGGGCAATGAGT...................................................................................................... 21 0 20 1.05 21 15 1 0 0 1 0 0 0 3 1
...................................TTGTAGTTATCTGGTCACTCATTTGAT............................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................CTCTTACGATATCAGCTAAAGGGGCT........................................................................................................................... 26 0 5 0.80 4 0 0 1 1 1 0 1 0 0 0
...........................................................................................ATTTTGTCTTCTCTTA............................................................................................................................................... 16 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................AGCTAAAGGGGCTTATAGTCTATGGG.............................................................................................................. 26 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................AGTCTATGGGCAATGAGTCGATCAC............................................................................................... 25 0 20 0.50 10 0 10 0 0 0 0 0 0 0 0
.........................................TCAACTGGTCACTCATTT............................................................................................................................................................................................... 18 2 4 0.50 2 0 0 0 0 0 2 0 0 0 0
....................................................CTCATTTGATAAAAAAGGGAAT................................................................................................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................ATATCAGCTAAAGGGGCTTATAGTCT................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................GGCAATGAGTCGATCACCCTTACG........................................................................................ 24 0 7 0.43 3 0 0 2 0 1 0 0 0 0 0
..........................................................................................................................GGGCTTATAGTCTATGGGCAATGAGT...................................................................................................... 26 0 7 0.43 3 0 3 0 0 0 0 0 0 0 0
................................................................................................................TCAGCTAAAGGGGCTTATAGTCT................................................................................................................... 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
........................................................................................AAACTTTTGTCTTCTCT................................................................................................................................................. 17 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................CTCTTACGATATCAGCTAAAGGCGCT........................................................................................................................... 26 1 6 0.33 2 0 0 0 1 0 1 0 0 0 0
.......................................................................................................CTTATGATATCAGCTAAAGGGGCTT.......................................................................................................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................CTAAAGGGGCTTATAGT..................................................................................................................... 17 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................TCTGCTCTTACGATATCAG...................................................................................................................................... 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TTATAGTCTATGGGCAATGAGT...................................................................................................... 22 0 14 0.29 4 0 1 0 0 2 0 0 0 0 1
..............................................................................................................................................................................ATATGTATTAAATAGACCCTATAGC................................................... 25 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................TTATAGTCTATGGGCAATGAGTCGAT.................................................................................................. 26 0 10 0.20 2 0 0 0 0 0 0 0 0 0 2
.................AACGCCACTACACTGAAT....................................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................CTTATAGTCTATGGGCAATGAGT...................................................................................................... 23 0 11 0.18 2 0 1 0 0 0 0 0 0 0 1
......................................................................................................................AAAGGGGCTAATAGTCTATGGGCAA........................................................................................................... 25 1 17 0.18 3 0 0 0 0 3 0 0 0 0 0
......................................................................................................TCTTACGATATCAGCTAAAGGGGC............................................................................................................................ 24 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................TCTTACGATATCAGCTAAAGGGGCT........................................................................................................................... 25 0 6 0.17 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................AAGGGGCTTATAGTCTATGGG.............................................................................................................. 21 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................CTTACGATATCAGCTAAAGGGGC............................................................................................................................ 23 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................AGGGCTTATAGTCTATGGGCAATGAGT...................................................................................................... 27 1 20 0.15 3 0 0 2 1 0 0 0 0 0 0
........................................................................................................TTACGATATCAGCTAAAGGGG............................................................................................................................. 21 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0
....................................................................................AGAGAAAATTTTGTCT...................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................CTCTTACGATTTCAGCTAAAGGCGC............................................................................................................................ 25 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................GGCTTATAGTCTATGGGCAATGAGT...................................................................................................... 25 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................GGGCTTATAGTCTATGGGCAATGA........................................................................................................ 24 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................GGGCTTATAGTCTATGGGCAATG......................................................................................................... 23 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................GGGCAATGAGTCGATCACCCTTA.......................................................................................... 23 0 9 0.11 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................CTATAGGCGCTTCTAGTCTAT................................................................................................................. 21 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................GCTTATAGTCTATGGGCAATGAGT...................................................................................................... 24 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................TCTTACGATATCAGCTAACGG............................................................................................................................... 21 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................CTATGGGCAATGAGT...................................................................................................... 15 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0
........................................................................................................................CGGGGCTTATAGTCTATGGG.............................................................................................................. 20 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................TATAGTCTATGGGAAATGAGTCGAT.................................................................................................. 25 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0
...............................................................................................................................TACAGTCTATGGGCAATGAGTCGATC................................................................................................. 26 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................ATTGGCAATGAGTCGATCACCCTTACG........................................................................................ 27 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................TTATAGTCTATGGGCAATGAGTCGA................................................................................................... 25 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0
...............................................................AAAAAGGGAATCGTTGAT......................................................................................................................................................................... 18 2 13 0.08 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TTATAGTCTATGGGCAATGAG....................................................................................................... 21 0 14 0.07 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TTATAGTCTATGGTCAATGAGTCGAT.................................................................................................. 26 1 16 0.06 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ATGAGTATTATAGAGAC........................................................... 17 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................TATAGTCTATGGGCAATGAGTCG.................................................................................................... 23 0 18 0.06 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................GGGCTTATAGTCTATGGACAATGAGT...................................................................................................... 26 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TTATAGTCTATGGGCA............................................................................................................ 16 0 19 0.05 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................GTCTATGGGCAATGAGTCGATCA................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................TAGTCTATGGGCAATGAGTCGATCAC............................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................TATAGTCTATGGGTAATGAGTCGAT.................................................................................................. 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................CTATGGGCAATGAGTCGAT.................................................................................................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................GTCTATGGGCAATGAGTCGATCAC............................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................TATAGTCTATGGGCAATGAG....................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:25784-26033 + dsi_18654 TAAGTGGCAGAATGATCTTGCGGTGATGTGAAATAAACATCAATAGACCAGTGAGTAAACTATTTTT--T--CCCTTAGTA------AATAAGA----------------------TCT---------TTT-----TTAAAACAGAAGA----GAATGCTATAGTCGAT----TTCCCCGAATATCAGATACCCGTTACTCAGC---------------------------TAGTGGGAATGCGAAGGCGAAAC-----------T---TAA----TCAT-----------------------------------------------------------------------AATTTC-------TCTGGGATATCGATATATTTATTTTA-GTTGCGGA-----------------------------ATAAAATAAGAAAAAATTT-------------CAAAAATGTA
droSec2 scaffold_6:159948-160194 + TAAGTGGCAGAATGATCTTGCGGTGATGTGAAATAAACATCAATAGACCAGTGAGTAAACTATTTTT--T--CCCTTAGTA------AATAAGA----------------------TCT---------TAT-----TTAAAACAGAAGA----GAATGCTATAGTCGAT----TTCCCCGAATATCAGATACCCGTTACTCAGC---------------------------TAGTGGGAATGCGAACGCGAAGT-----------T---T-------CAT-----------------------------------------------------------------------AATTTC-------TCTGGGATATCGATATATTTATTTTA-GTTGCGGA-----------------------------ATAAAATAAGAAAAAATTT-------------CAAAAATGTC
dm3 chrU:1345548-1345787 + TAAGTGGGAGAATGATCTTGTGGAGATGTAGAACAAACATCAATAGACCACTGAGTAAACTATTTGTT-T--TCCTTAGTA------AATATGA----------------------TCT---------GATTTGATATAAAACAAAAGAAGAACAATGCTATAGTCGAA----TTACGTGACTATCAG--TCCCGTTACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATCGATAGAC--ATCG-GT------GA-----------------------------ATAAAATGAGAAAAAATGTAACAA-A---TTATTTAAAAGTA
droEre2 scaffold_4845:4306776-4307027 - TGAATTG-AAACTAAACTTTTGGTCCGCTGATATGTGCATTTA--TACAAGCGTGTTATCAATTTTTT-ATTACCACAGTACCA---AAAAAAA----------------------TAAAACGTGCTA-----CAGAAAAAACAAGATA----GAAGGCTATAGTCGAG----TTCCCCGACTATCATATACCCGTTACTCAGC---------------------------TGGTGGATGTGCAAACGAGAAAT-----------A---T-------CAA-----------------------------------------------------------------------AA-TTT-------TCTGGAATATCTGTAGAA--ATTT-GGGAAAAATA-----------------------------ATAAAATGAAAAGAAACTT-------------GAAAAA----
droYak3 v2_chr2L_random_028:933984-934296 - TAAGTGGCAAAATGATTTTTTGGTGATAAGGAAGTAACATCAATAGACCTCTGAGTAAACAATTTTTT-T--CCCTTACTA------TCTACTATTCCATTACTAACTATTTTTTCCTT---------GATTTGATATAAAACAAGAGA----GAACGCT-TAGTCAAG----TTCCCCGACTATCTGATACCTGTTACTCAGC---------------------------TAGTGGAAGTGCGAAGGAGAGTC-----------T---TCA----GCAC-----------------------------------------TGACAGTTTTTGGCGGTTTGTGAG--CAAAAAGTTT-------TTTGGCAAATCGATACAA--ATTT-AC-AAGACTAATA--------------------------C--AAAAATGAAAATATAT--CAA-AACATTTTTCAAAAGTG
droEug1 scf7180000409762:7916-8133 + AAT---------------------------------------------------------TATTTTT--T--CCCA----------------------------------------TCT---------AGTCCGAAATAAAACAAGAGA----GAACGCTATAGTCGAG----TTCCACCACTATAAGATACCTGTTACTGTTTTACGCAATTTTAAAACATTCATTTTGCTAGTGGAAATTCACAAGGT---------------T---T--------------------------CTCCG------------------------------------------ATT---AAAAGATC-------TTTTGTAAATCGATATAT--ATTT-AC-----GGA-----------------------------AATAAGTTATACAAGGTCAAACAAAAGCATT-CATAATAATA
droBia1 scf7180000301511:39670-39858 + ATTTT-------------------------------------------------------------C--A--CAATTATTA------AATAATT----------------------A----------------CAAGATGAACAAGGAA----GAACGCTATAGTCGAG----TGCCTCGACTATCAGATACCCGTTACACAGC---------------------------TTGAGGGAGAAAAATGTAAACGGAAAGAAAAAATA---TTCTAAAGCGCTAC---CTACCGGATATTTTGGTATATGTCATGAGGGCGGCAAACAGTT---------------------------------------------------------------------------------------------------------------------T--------------TAAGCGTTT
droTak1 scf7180000415401:1136855-1137076 - TGAGA--------------------------TAGTAGCAACAATTAATTAATGTTTTTACTAA--------------AATATTT--TACAA--C---TAATAATAA----------ATATGTTTTTTG-----TATAATAAACAAGAGA----GAACGCTATAGTCGGGTGGATGTCCCGACTATGCAATACCCGTCACTCGGC---------------------------TAAAGAGAGTGCGAGGGAGATGGATACATAACGTTTTTTGATTGCACATAACTTTTTAATG----------------------------------------------------------------------------------------------------------------------------------------------AATGATCCGATTT-------------GAAAAATGTA
droEle1 scf7180000491217:197032-197161 - AAGCA--------------------------------------------------------------------------------------AAA----------------------TCT--------------CAAGTGAAACAAGAGA----GAACGCCGAAGTTGAG----TTCCCCGACAATTAGATACCCGTTACTCAGC---------------------------TAACA---------------AAT-----------T---TCA----TCAC-----------------------------------------AA----------------------------ATTTTC-------CCCCAGAAAAAAATAGCCTGTTT--------------------------------------------------------------------------TTGGTGGCG
droRho1 scf7180000779406:11579-11842 - TTCGCAGCAGAATAATAC-----------------------AATAAATAAATAC------AATCA------------AATATTTTTGGCAA--A----------------------TGA--------------TAATAAAAACAAGAGA----GAACGCTATAGTCGGG----TGCCCCGACTATCAGATACCCGTTACTCAGG---------------------------TAAAGGGAGTGCGAGGGAGATGGAGATAGAAACTT---TGATCACGCATAACTTTTTAACGAATGGTCCG------------------------------------------ATTTGAAAAATTTC-------TTCTACATTTCGATAGGT--ATTG-AT-AAACACAATAAAACTGCAAAAATTTTAACTT-----------------------T-------------TAAAATCGTA
droFic1 scf7180000451927:3448-3679 + TACGAATTAGATTGACCTACTGATGATGTGAAATGAACATCAATAGACCAAGGAGTCAACTATTTTT--T--TCCTTTGCA------TTTAAGA----------------------ACC---------GATTTAATGTAGAAAAAG--------GCATTTACTTTTCAT----TTCGACAAAAAAAACTTGCCCGTTTTTGAAA---------------------------ACGA-------------------------------------------------------------------------------------------------------------------AAAAGTCTTGTGAA-AGTGAAAACGGGAGCACCAATTT-----------------------------TCGTTTTCGAAAACGAAAACGAGAGAATCT-------------TGTGAAAGTG
droKik1 scf7180000301881:26744-26962 - TACCTGCTAG----ATCTTATGGTGGTGTGGAATAAACATCAATAGACCACTGAGTAAACAATTTTTT-T--CCTTTTGTA------AATAAGA----------------------TCT---------CATTTCATATA-----AAAAA----GCCATTTACATTTTAT----TCCGGACAGAAAAAGGTGCCCGTTTTTCAAA---------------------------TCGA--------------------------------------------------------------------------------------------------------------------AAAATCTT-TCATTTTCGGAAACCGGAGCATCGATTTCGTGTTTTCAA-----------------------------ATACGAAAACAAAAAATCT---------------------TA
droBip1 scf7180000394785:16612-16760 - TACAAGCCTAATTGATCTTCTAGAGGTCTTAAAAGAACGACAATAAACCAATGAGTCAACTACTTTTTTT--CCTTTTGCA------AATAAGA----------------------TCC---------GATTTAATATAGAACAAGAAAG---GAAAGCTAACTTCGGG----CGG------------------------------------------------------------------------------------------------------------------------------------------------AGCCGAAGT---------------------------------------------------------------------------------------------------------------------T--------------TATATACCC
droWil2 scf2_1100000004914:12084-12121 + AGCTG--C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGA-----------------------------ATCAAATAATAAAGAATTA-------------AAAAAATGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAAGTGGCAGAATGATCTTGCGGTGATGTGAAATAAACATCAATAGACCAGTGAGTAAACTATTTTT--T--CCCTTAGTA------AATAAGA----------------------TCT---------TTT-----TTAAAACAGAAGA----GAATGCTATAGTCGAT----TTCCCCGAATATCAGATACCCGTTACTCAGC---------------------------TAGTGGGAATGCGAAGGCGAAAC-----------T---TAA----TCAT-----------------------------------------------------------------------AATTTC-------TCTGGGATATCGATATATTTATTTTA-GTTGCGGA-----------------------------ATAAAATAAGAAAAAATTT-------------CAAAAATGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................TTATTTTA-GTTGCGGA-----------------------------ATAAAATAAGA...............................2711.00100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTA-GTTGCGGA-----------------------------ATAAAATAAGAAAAAA..........................2711.00100000010000000000
.....GGCAGAATGATCTTGCGGTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGAAGGCGA...........................................................................................................................................................................................................................2811.00100010000000000000
..................................................................................................................................................................................................GTTACTCAGC---------------------------TAGTGGGAATGCGAAGG..............................................................................................................................................................................................................................2711.00100010000000000000
.................................................................................................................................................................................................CGTTACTCAGC---------------------------TAGTGGGAATGCG..................................................................................................................................................................................................................................2461.00600006000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCG..................................................................................................................................................................................................................................2560.83500000010004000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCGAA................................................................................................................................................................................................................................2760.33200000020000000000
...................................................................................................................................................................GTCGAT----TTCCCCGAATATCAGATA.......................................................................................................................................................................................................................................................................................2430.33100000010000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................2390.33300000000003000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................2470.29200000000002000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGAA................................................................................................................................................................................................................................2380.25200010010000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGGGATATCGATATAT........................................................................................16140.21300000000003000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCGA.................................................................................................................................................................................................................................2660.17100000000001000000
........................................................................................................................................................................................TCAGATACCCGTTACTCAGC---------------------------TAGTGG.........................................................................................................................................................................................................................................26200.15300000003000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGA.................................................................................................................................................................................................................................2280.13100000000001000000
........................................................................................................................................................................................TCAGATACCCGTTACTCAGC---------------------------TAGTG..........................................................................................................................................................................................................................................25200.10200000001010000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAA......................................................................................................................................................................................................................................21100.10100000000001000000
............................................................................................................................................................TGCTATAGTCGAT----TTCCCC...................................................................................................................................................................................................................................................................................................19100.10100000000001000000
.......................................................................................................................................................................................................TCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................16200.10200000000002000000
.........................................................................................................................................................GAATGCTATAGTCGAT----T........................................................................................................................................................................................................................................................................................................17110.09100000000001000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGA.......................................................................................................................................................................................................................................20130.08100000000100000000
.....................................................................................................................................................................................ATATCAGATACCCGTTACTCAGC---------------------------T..............................................................................................................................................................................................................................................24140.07100000010000000000
........................................................................................................................................................................................TCAGATACCCGTTACTCAG...........................................................................................................................................................................................................................................................................19200.05100000000001000000
........................................................................................................................................................................................TCAGATACCCGTTACTCAGC---------------------------T..............................................................................................................................................................................................................................................21200.05100000010000000000
.......................................................................................................................................................................................................................................TAGTGGGAATGCGAA................................................................................................................................................................................................................................15200.05100000000100000000
......................................................................................................................................................................................TATCAGATACCCGTTACTCAGC---------------------------...............................................................................................................................................................................................................................................22200.05100010000000000000
droSec2
TAAGTGGCAGAATGATCTTGCGGTGATGTGAAATAAACATCAATAGACCAGTGAGTAAACTATTTTT--T--CCCTTAGTA------AATAAGA----------------------TCT---------TAT-----TTAAAACAGAAGA----GAATGCTATAGTCGAT----TTCCCCGAATATCAGATACCCGTTACTCAGC---------------------------TAGTGGGAATGCGAACGCGAAGT-----------T---T-------CAT-----------------------------------------------------------------------AATTTC-------TCTGGGATATCGATATATTTATTTTA-GTTGCGGA-----------------------------ATAAAATAAGAAAAAATTT-------------CAAAAATGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................CTCAGC---------------------------TAGTGGGAATGCGAACGC.............................................................................................................................................................................................................................2440.2511000
.........................................................................................................................................................GAATGCTATAGTCGAT----TTCCCC...................................................................................................................................................................................................................................................................................................2240.2510010
.......................................................................................................................................................................................ATCAGATACCCGTTACTCAGC---------------------------TAG............................................................................................................................................................................................................................................24200.1022000
dm3
TAAGTGGGAGAATGATCTTGTGGAGATGTAGAACAAACATCAATAGACCACTGAGTAAACTATTTGTT-T--TCCTTAGTA------AATATGA----------------------TCT---------GATTTGATATAAAACAAAAGAAGAACAATGCTATAGTCGAA----TTACGTGACTATCAG--TCCCGTTACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATCGATAGAC--ATCG-GT------GA-----------------------------ATAAAATGAGAAAAAATGTAACAA-A---TTATTTAAAAGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................241124.552700000000000000000000000000000000000001010001030101030500005300000000000000000000000000030000000101000000000000010000000000000000000100000000285800477616222200000000000000000000000000000000002010200500000000900000500021203305004400000000001000000000000000000000000000000000000000000000000021000162815000000161313000000000000005802000000
..................................................................................................................................................................................................................................................................................................................................................................TTT-------GCTGGGATATCGATAGAC--ATCG-GT------.........................................................................27115.00150000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000100000000000000000000000000000000000000030100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010100000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCG..................................................................................................................................................................................................................................2599.67870000000000000000000000000000000000000020300010102010120000100000000000000000000000000010000000000000000000000000000000000000000000000000000001300511310100000000000000000000000000000000000010000001000000004002000000100250403320000000000000000000000000000000000000000000000000000000000000000002601010000824000000000000002200000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................23148.07113000000000000000000000000000000000000000022100000100030000010000000000000000000000000001000000000000000000000000000010000000000000000000000005140051044004220000000000000000000000000000000000000000516000000600000000015014002000000000000000000000000000000000000000000000000000000000000000001000011201000000330000000000000001511000000
...............................................................................................................................................................................................................................................ATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATA.................................................................................................1916.0060000000000000000000000000000000000000000000000000000000004020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------.....................................................................................................................2684.00320000000000000000000000000000000000000000000010000000000000230000000000000000000000000000000000000000000000000000000100000000000000000000000110300210020000100000000000000000000000000000000000000000000000002000000000000100100030000000000000000000000000000000000000000000000000000000000000000003101000000001000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................TTTT-------GCTGGGATATCGATAGAC--ATC...................................................................................2513.0030000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGA...................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................T-------GCTGGGATATCGATAGAC--ATCG-GT------.........................................................................2513.0030000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................GTTACTCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................21142.793900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000200000000000000000000000002000000000000000000000000300000000000020000100000000000000010000000000000000000001010000210000002000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGA.......................................................................................................................................................................................................................................20202.605200000000000000000000000000000000000100000000001000200000011000000000000000000000000000000000000000000000000000000000000000000000000000100000100000111001000000000000000000000000000000100100100000010200000000000000002010000000000000000000100000000000010000000000000000000000000000000000000000121010000010623000000000000000021000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAA......................................................................................................................................................................................................................................21182.17390000000000000000000000200000000000000000000010000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000100100011000000000000000000000001000000000000010000002000000006000000201200300000000000000000000000000000000000000000000000000000000000000000000000011311000010001000000000000000110000000
..................TGTGGAGATGTAGAACAAACATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGA...................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.......................................................................................................................................................AACAATGCTATAGTCGAA----TTA......................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
.........................................................................................TATGA----------------------TCT---------GATTTGATATAAAACAAAA...................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------T....................................................................................................................2332.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
.................................CAAACATCAATAGACCACTGA................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATCG..............................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTT-------GCTGGGATATCGATAGAC--A.....................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCG..................................................................................................................................................................................................................................21121.33160000000000000000000000000000000000000000000000001010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000100000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100130000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................TTACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................21151.20180000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000700000000000000200000000000000000000000000000000000000000000000000000020000000000100000000000000100003000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAAT.....................................................................................................................................................................................................................................22161.13180000000000000000000000000000000000000000010000001000000001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000110200100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000200000000
...........................................................................................................................................................................................................C---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GA........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGG.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACAATGCTATAGTCGAA----TTACGTGAC................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AAAGAAGAACAATGCTATAGT.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATGAGAAAAAATGTAACAA-A---T............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGAT..................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATCTTGTGGAGATGTAGAACAAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTT-------GCTGGGATATCGATAGAC--ATCG-GT------.........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGATCTTGTGGAGATGTAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AAGAAGAACAATGCTATAGTC................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................ATGTAGAACAAACATCAATAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................CTATCAG--TCCCGTTACTCAGC---------------------------TAG............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TT-------GCTGGGATATCGATAGAC--AT....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................GAACAATGCTATAGTCGAA----TTACGTGAC................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAAAAATGTAACAA-A---TT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........AGAATGATCTTGTGGAGATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AAAGAAGAACAATGCTATAGTCGAA----T........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATA.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAAGTGGGAGAATGATCTTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTT-------GCTGGGATATCGATAGAC--ATCG-G................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATAAAACAAAAGAAGAAC............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTGTGGAGATGTAGAACAAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATC...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................TATAAAACAAAAGAAGAACAATGC.......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GTA------AATATGA----------------------TCT---------GATTTG................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GC........................................................................................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TAGACCACTGAGTAAACTATTTGTT-.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTT-------GCTGGGATATCGATAGAC--AT....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATAGACCACTGAGTAAACTATTTGT...................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................C---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------G.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATC...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CCTTAGTA------AATATGA----------------------TCT---------GATTTG................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTTGTGGAGATGTAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTTGTGGAGATGTAGAACAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
TAAGTGGGAGAATGATCTTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T--TCCTTAGTA------AATATGA----------------------TCT---------GATTTGA...............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGG....................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGA...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGCGA------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATCGATAGAC--A.....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGTGGGAGAATGATCTTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTT-------GCTGGGATATCGATAGAC--A.....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATCG-GT------GA-----------------------------ATAAAATGAGAAAAAAT.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTTT-------GC........................................................................................................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TATCAG--TCCCGTTACTCAGC---------------------------TAGT...........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AATATGA----------------------TCT---------GATTTGATATA...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------T....................................................................................................................2730.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGG........................................................................................................................................................................................................................................19200.65130000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------.....................................................................................................................22110.6470000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
.....................................................................................................................................................................................................ACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------.....................................................................................................................21110.6470000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCGT------------------------------------------------------------------------------------------------------------.....................................................................................................................26170.59100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100410000000000000000000000000000000000000000000000000000000000000000210000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAAGTGGGAGAATGATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TTG..................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGG.........................................................................................................................................................................................................................................18200.4590000000000000000000000000000000000000000100010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000100100001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................19190.4280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000030000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000010000000000000000000000000000
...................................................................................................................................................................................................TTACTCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................20180.3970000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000001000000020000000000000000000000000000
.................................................................................................................................................................................................CGTTACTCAGC---------------------------TAGTGGGAAT.....................................................................................................................................................................................................................................21160.3860000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000020000000000000000020000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------TC...................................................................................................................24190.3770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000010000000000001000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
.................................................................................................................................................................................................CGTTACTCAGC---------------------------TAGTGGGAA......................................................................................................................................................................................................................................20180.3360000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.....................................................................................................................................................................................................ACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------T....................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGT...................................................................................................................................................................................................................................24200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000001000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................CGTTACTCAGC---------------------------TAGTGGGAATG....................................................................................................................................................................................................................................22140.2940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000
....................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATCGA.............................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...........................................TAGACCACTGAGTAAACTATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------T....................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTT-------GCTGGGATATCGATAGA.........................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------TTTT-------GCTGGGATATCGATAGT.........................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCT..................................................................................................................................................................................................................................25150.2030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................AAACATCAATAGACCACTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................AACATCAATAGACCACTGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGGGATATCGATAGAC--AT....................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGGGATATCGATAGAC--ATCG-GG------.........................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTACTCAGC---------------------------TAGTGGGAATGCG..................................................................................................................................................................................................................................22120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGCGT------------------------------------------------------------------------------------------------------------.....................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATT....................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCAATAGACCACTGAGTAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................TAGACCACTGAGTAAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCGTTACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------C....................................................................................................................2780.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................20160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGTTACTCAGC---------------------------TAGTGGGAATGCG..................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CCCGTTACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................25100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AATAGACCACTGAGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................16100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACTCAGC---------------------------TAGTGGGAAT.....................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TTACTCAGC---------------------------TAGTGGGAATGCGA------------------------------------------------------------------------------------------------------------.....................................................................................................................23110.0910000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGTTACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTTACTCAGC---------------------------TAGTGGGAATGC...................................................................................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGAATTG-AAACTAAACTTTTGGTCCGCTGATATGTGCATTTA--TACAAGCGTGTTATCAATTTTTT-ATTACCACAGTACCA---AAAAAAA----------------------TAAAACGTGCTA-----CAGAAAAAACAAGATA----GAAGGCTATAGTCGAG----TTCCCCGACTATCATATACCCGTTACTCAGC---------------------------TGGTGGATGTGCAAACGAGAAAT-----------A---T-------CAA-----------------------------------------------------------------------AA-TTT-------TCTGGAATATCTGTAGAA--ATTT-GGGAAAAATA-----------------------------ATAAAATGAAAAGAAACTT-------------GAAAAA----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TAAGTGGCAAAATGATTTTTTGGTGATAAGGAAGTAACATCAATAGACCTCTGAGTAAACAATTTTTT-T--CCCTTACTA------TCTACTATTCCATTACTAACTATTTTTTCCTT---------GATTTGATATAAAACAAGAGA----GAACGCT-TAGTCAAG----TTCCCCGACTATCTGATACCTGTTACTCAGC---------------------------TAGTGGAAGTGCGAAGGAGAGTC-----------T---TCA----GCAC-----------------------------------------TGACAGTTTTTGGCGGTTTGTGAG--CAAAAAGTTT-------TTTGGCAAATCGATACAA--ATTT-AC-AAGACTAATA--------------------------C--AAAAATGAAAATATAT--CAA-AACATTTTTCAAAAGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................TCAGC---------------------------TAGTGGAAGTGCGAAGGAGA...........................................................................................................................................................................................................................25201.0020000000000020
....................................................................................................................................................................................................................................................AAGGAGAGTC-----------T---TCA----GCAC-----------------------------------------TGACAGT..............................................................................................................................................25200.05100100000000
............................................................................................................................................................................................................................................................TC-----------T---TCA----GCAC-----------------------------------------TGACAGTTTTTGGC.......................................................................................................................................24200.05100100000000
.......................................................................................................................................................................................................................................TAGTGGAAGTGCGAAGGAGAGTC-----------T---TC.......................................................................................................................................................................................................26200.05100100000000
.............................................................................................................................................................................................................................................................................TCA----GCAC-----------------------------------------TGACAGTTTTTGGCGG.....................................................................................................................................23200.05100100000000
................................................................................................................................................................................................CTGTTACTCAGC---------------------------TAGTGGAA.......................................................................................................................................................................................................................................20200.05100100000000
................................................................................................................................................................................CCCGACTATCTGATACCTG...................................................................................................................................................................................................................................................................................19200.05110000000000
...........................................................................................................................................................................................................................................GGAAGTGCGAAGGAGAGTC-----------T---TC.......................................................................................................................................................................................................22200.05100100000000
..........................................................................................................................................................................................................................................................AGTC-----------T---TCA----GCAC-----------------------------------------TGACAGTTTTTGG........................................................................................................................................25200.05101000000000
.............................................................................................................................................................................................................................................AAGTGCGAAGGAGAGTC-----------T---T........................................................................................................................................................................................................19200.05100000010000
...........................................................................................................................................................................................................................................................GTC-----------T---TCA----GCAC-----------------------------------------TGACAGTTTTTGGCG......................................................................................................................................26200.05101000000000
..........................................................................................................................................................................................................................................................AGTC-----------T---TCA----GCAC-----------------------------------------TGACAGTTTTTGGC.......................................................................................................................................26200.05100100000000
droEug1
AAT---------------------------------------------------------TATTTTT--T--CCCA----------------------------------------TCT---------AGTCCGAAATAAAACAAGAGA----GAACGCTATAGTCGAG----TTCCACCACTATAAGATACCTGTTACTGTTTTACGCAATTTTAAAACATTCATTTTGCTAGTGGAAATTCACAAGGT---------------T---T--------------------------CTCCG------------------------------------------ATT---AAAAGATC-------TTTTGTAAATCGATATAT--ATTT-AC-----GGA-----------------------------AATAAGTTATACAAGGTCAAACAAAAGCATT-CATAATAATASizeHit CountTotal NormTotal
No Reads
droBia1
ATTTT-------------------------------------------------------------C--A--CAATTATTA------AATAATT----------------------A----------------CAAGATGAACAAGGAA----GAACGCTATAGTCGAG----TGCCTCGACTATCAGATACCCGTTACACAGC---------------------------TTGAGGGAGAAAAATGTAAACGGAAAGAAAAAATA---TTCTAAAGCGCTAC---CTACCGGATATTTTGGTATATGTCATGAGGGCGGCAAACAGTT---------------------------------------------------------------------------------------------------------------------T--------------TAAGCGTTTSizeHit CountTotal NormTotal
No Reads
droTak1
TGAGA--------------------------TAGTAGCAACAATTAATTAATGTTTTTACTAA--------------AATATTT--TACAA--C---TAATAATAA----------ATATGTTTTTTG-----TATAATAAACAAGAGA----GAACGCTATAGTCGGGTGGATGTCCCGACTATGCAATACCCGTCACTCGGC---------------------------TAAAGAGAGTGCGAGGGAGATGGATACATAACGTTTTTTGATTGCACATAACTTTTTAATG----------------------------------------------------------------------------------------------------------------------------------------------AATGATCCGATTT-------------GAAAAATGTASizeHit CountTotal NormTotal
No Reads
droEle1
AAGCA--------------------------------------------------------------------------------------AAA----------------------TCT--------------CAAGTGAAACAAGAGA----GAACGCCGAAGTTGAG----TTCCCCGACAATTAGATACCCGTTACTCAGC---------------------------TAACA---------------AAT-----------T---TCA----TCAC-----------------------------------------AA----------------------------ATTTTC-------CCCCAGAAAAAAATAGCCTGTTT--------------------------------------------------------------------------TTGGTGGCGSizeHit CountTotal NormTotal
No Reads
droRho1
TTCGCAGCAGAATAATAC-----------------------AATAAATAAATAC------AATCA------------AATATTTTTGGCAA--A----------------------TGA--------------TAATAAAAACAAGAGA----GAACGCTATAGTCGGG----TGCCCCGACTATCAGATACCCGTTACTCAGG---------------------------TAAAGGGAGTGCGAGGGAGATGGAGATAGAAACTT---TGATCACGCATAACTTTTTAACGAATGGTCCG------------------------------------------ATTTGAAAAATTTC-------TTCTACATTTCGATAGGT--ATTG-AT-AAACACAATAAAACTGCAAAAATTTTAACTT-----------------------T-------------TAAAATCGTASizeHit CountTotal NormTotal
No Reads
droFic1
TACGAATTAGATTGACCTACTGATGATGTGAAATGAACATCAATAGACCAAGGAGTCAACTATTTTT--T--TCCTTTGCA------TTTAAGA----------------------ACC---------GATTTAATGTAGAAAAAG--------GCATTTACTTTTCAT----TTCGACAAAAAAAACTTGCCCGTTTTTGAAA---------------------------ACGA-------------------------------------------------------------------------------------------------------------------AAAAGTCTTGTGAA-AGTGAAAACGGGAGCACCAATTT-----------------------------TCGTTTTCGAAAACGAAAACGAGAGAATCT-------------TGTGAAAGTGSizeHit CountTotal NormTotal
No Reads
droKik1
TACCTGCTAG----ATCTTATGGTGGTGTGGAATAAACATCAATAGACCACTGAGTAAACAATTTTTT-T--CCTTTTGTA------AATAAGA----------------------TCT---------CATTTCATATA-----AAAAA----GCCATTTACATTTTAT----TCCGGACAGAAAAAGGTGCCCGTTTTTCAAA---------------------------TCGA--------------------------------------------------------------------------------------------------------------------AAAATCTT-TCATTTTCGGAAACCGGAGCATCGATTTCGTGTTTTCAA-----------------------------ATACGAAAACAAAAAATCT---------------------TASizeHit CountTotal NormTotal
No Reads
droBip1
TACAAGCCTAATTGATCTTCTAGAGGTCTTAAAAGAACGACAATAAACCAATGAGTCAACTACTTTTTTT--CCTTTTGCA------AATAAGA----------------------TCC---------GATTTAATATAGAACAAGAAAG---GAAAGCTAACTTCGGG----CGG------------------------------------------------------------------------------------------------------------------------------------------------AGCCGAAGT---------------------------------------------------------------------------------------------------------------------T--------------TATATACCCSizeHit CountTotal NormTotal
No Reads
droWil2
AGCTG--C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGA-----------------------------ATCAAATAATAAAGAATTA-------------AAAAAATGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 03:35 PM