ID:

dsi_18586

 Coordinate:

2l:5009778-5009927 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATCTATAGAAATTGATTTTAAGTTTTTGATTCTCACCATGCATCGTAGTTGAAAACTATTTATTTATTTGAACAACTTGTGCACTTTATAGTTGAAACTGAAAAGAGCACGTAGCTTGTACCCAATTAGTTGCATGATTTGCATAGTGATTTCAAACATATTGAACATAAACTAATGAACTTATTATTATTATTTATTAGCAACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGG
**************************************************.....................(((((((((((.((((.((((....)))).)))).))))).)).)))).....((((..((((.....))))...))))(((((.....))))).(((((.((((((........)))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...........................................................................................................................................................................................................................GCTGTCGATGGCGATGTCATCA......... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACCGATGGCGGCGATGCTGTCG........................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCAT........... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACCGATGGCGGCG................................. 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCTGTCGATGGCGATGTC............. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................ACAACACCGATGGCGGCGATGCTGTCG........................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAACAACACCGATGGCGGCGATGC............................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGCGATGCTGTCGATGGC................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................GCGATGCTGTCGATGGCGATGTC............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACACCGATGGCGGCGATGCTGTCGATGG.................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................TATAGTTGAAACTGAAAAGAGCAGG........................................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................AACAACACCGATGGCGGC.................................. 18 1 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGGAACACCGATGGCG.................................... 16 1 2 0.50 1 0 0 0 0 1 0 0 0 0
......AGAAGTTGATTTTAAGTT.................................................................................................................................................................................................................................. 18 1 3 0.33 1 0 0 0 0 1 0 0 0 0
..........................................................TTTATTTATCTGAACTACGTG........................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................AGGAACACCGATGGCGA................................... 17 2 20 0.25 5 0 0 0 0 4 0 0 0 1
...........................................................................................................................................................................................................................................ACATCAATACCACGG 15 1 10 0.10 1 0 0 0 0 0 0 0 0 1
.TCTATAGACAGCGATTTTAA..................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................GTAGGAACACCGATGGCGA................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................GAGGAACACCGATGGC..................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TAGATATCTTTAACTAAAATTCAAAAACTAAGAGTGGTACGTAGCATCAACTTTTGATAAATAAATAAACTTGTTGAACACGTGAAATATCAACTTTGACTTTTCTCGTGCATCGAACATGGGTTAATCAACGTACTAAACGTATCACTAAAGTTTGTATAACTTGTATTTGATTACTTGAATAATAATAATAAATAATCGTTGTGGCTACCGCCGCTACGACAGCTACCGCTACAGTAGTTATGGTGCC
**************************************************.....................(((((((((((.((((.((((....)))).)))).))))).)).)))).....((((..((((.....))))...))))(((((.....))))).(((((.((((((........)))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
...........................................................................................................................................................................................................GTGGCTACCGCCGCTACGACA.......................... 21 0 1 3.00 3 3 0 0 0 0 0
........................................................................GTTGAACACGTGAAATATCAA............................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
...................TTCAAAACCTAAGAGT....................................................................................................................................................................................................................... 16 1 16 0.31 5 0 0 5 0 0 0
...............AAAATTCAAAACCTAAGAGC....................................................................................................................................................................................................................... 20 2 6 0.17 1 0 0 0 1 0 0
.........................................................................................................................................AGACGTACCACTAAAGTT............................................................................................... 18 2 8 0.13 1 0 0 0 1 0 0
.........................................................................................................................................................................................GAATAATAAATAATCCTTG.............................................. 19 2 8 0.13 1 0 0 0 0 1 0
.......................................................................................................................................................AGTTTGTACAACTTG.................................................................................... 15 1 16 0.06 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:5009728-5009977 + dsi_18586 ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGA---TTCTCACCATGCA--TCGTAGT--TGAAAAC---------------TATTT----------A----T-------TTATTTGAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGCTTGT--ACCCAATTAGTTGCAT------------------GATT----------------------------------------------------------------TGCATA----GTGAT-----TTCAAA--CATATTGAACATAAACTAA---TGA---A------CTTATTATTAT----------------------------------------TA-----------TTTATTAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGG
droSec2 scaffold_5:3286034-3286282 + ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGA---TTCTCACCATGCA--TCGTAGT--TGAAAAC---------------TATTT---------------A-------TTGTTTGAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGTTTGT--ACCCAATTAGTTGCAT------------------GATT----------------------------------------------------------------TGCATA----GTGTT-----TTCAAA--CATTTTGAACATAAACTAA---TGG---A------CTTATTATTAT----------------------------------------TA-----------TTTATTAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGG
dm3 chr2L:5204910-5205153 + ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGAGTTTTCTCA-CATGCA--TCGTAGT--TGAAAAG---------------TATTT---------------A-------TTGTTTGAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGTTTGT--ACTCAATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----GTGCT-----TTAAAA--CATATTGAACATAAACTAA---TGG---A------CTTATAAT-------------------------------------T----CGA-----------ATCTTTAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGG
droEre2 scaffold_4929:5282886-5283128 + ATCTA--TAGAA-ATT-GATTTTAAG-----TTCTTGA---TCCTCA-CATGCA--TCGTAGT--TTAAAAC--------------GTATTT-----------------------TTCTTTGA---ACA-------------------------TGT--GCACTTTAT------------------------------------A----GTTGA-AC------------------------------------------T---GAA-AAGAGCACAT-------AGTTTGT--AACCCATTAGTTGCAT------------------GACT----------------------------------------------------------------TGCATT----GTGTT-----TTCAAT--CATACTAAGCATTAGCTAA---TGA---A------TCTGCATC-------------------------------------T----CCA-----------ACCCATAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGG
droYak3 2L:10322451-10322703 - ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGA---TTCTCA-CATGCA--TCGTAGTCTTGAAACC---------------TTTTT--TC----T-T----T-------TTGTTTAAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCATGT-------AGTTTGT--AACCCATTAGTTGCAT------------------GATT----------------------------------------------------------------TGCATA----GCCTT-----TTCAAT--CATATTTAACATTAGCTAA---TGG---A------CTTATATC-------------------------------------C----CGA-----------ATCTATAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGG
droEug1 scf7180000409005:1091751-1091989 + ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTCGT---TTCACA-AATGCA--TCGTAGT--TTTATAT------------------TC-----------------------ATTTTCGAGCAACC-------------------------TGT--GCACTTTCT------------------------------------A----GTCTTAAA------------------------------------------C---GAA-AAGAGCACAT-------AGCTTTT--CCCTGAGTAGTTGCAT------------------GATT----------------------------------------------------------------TTCATA----GTTAT-----TTTC---CTATCTGTCACATTTATTAA---TAG---A------TTTATTTT-------------------------------------T----CGA-----------ATCTATAGC------AACATCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droBia1 scf7180000302261:644162-644404 + ATCTA--TAGAA-ATT-GATTTTAAG-----TTT-TGT---TACACC-CATGCA--ACGTAGT--TA------GTTTG---------CCTT------------------------TGTTTTAAGCAACT-------------------------TAA--GCACTTTAT------------------------------------A----GTGGTAAA------------------------------------------A----CA-AGGAGCACGT-----GTAGTGTAT--CCCCCAGTAGATGCAT------------------GATT----------------------------------------------------------------TGTGTA----GATAC-----TGAAGTGCTATTTGATATATGAACTAA---TGG---A------TTTCT-TT-------------------------------------T----CCA-----------ACCCATAGC------CACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droTak1 scf7180000415704:325071-325300 - ATATT--TAGAA-ATTTGATTTTAAG-----TTCTTGT---TTCACA-CATGCA--TCGTAGA--TTAATAT----------------------------------------------------------------------------------TAT--GCACTTTAT------------------------------------A----TTTGTAAA------------------------------------------TGAAAAA-AAGAGCACAT-------TGTTTTT--CCCTCAGTAGTTGCAT------------------GATT----------------------------------------------------------------TACAAA----CAGAT-----CTCATTGCTATTTTTGACCTTTACTAA---TAG---A------TTTATCTT-------------------------------------T----CGA-----------ACCCATAGC------AACAGCGACGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droEle1 scf7180000491273:12384-12535 - ATCTA--TAGAA-GTT-GATTTTAAG-----TTTGTGT---T--ACA-CATGCA--TTGTAGT--TTTATAT--------------GAAGTT----------T----T-------TAGTTAAAGCAACT-------------------------TGT--GCACTTTAT------------------------------------G----GTTGTAAA------------------------------------------T---GAA-AAGAGCACAT-------AGTTATGACCCCTTAGTAGTTGCAT------------------GATT----------------------------------------------------------------TTTATA----GTGAT-----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779577:10709-10959 - ATCTA--TAGAA-ATT-GATTTTAAG-----TTTGTGT---T--ACA-CATGCA--TTGTAGT--TTTACAT--------------ACCTTT---------TT-----TT-----GGTTTTGAGCAACT-------------------------TGT--GCACTTTAA------------------------------------A----GTTGTAAA------------------------------------------C---GAA-AAGAGCACAT-------AGTCTTG--CCCCCAGTAGTTGCAT------------------GATT----------------------------------------------------------------TTCATA----GTAAT-----TTCCTTACTATGTGGCACTTTAACTAA---TTGGTGT------TTTATTTC-------------------------------------T----CGA-----------AACCATAGC------AATACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droFic1 scf7180000453842:1043159-1043404 - ATCTA--TAGAA-ATT-G-TTTTAAG-----TTTGTGT---TTTGCA-CATGCA--ACGTAGT--TTTAATCTG-------------AATTT----------T----T-------TCGTTTGAGCAACT-------------------------TGT--GCACTT-GT------------------------------------A----GATTCCAA------------------------------------------C---GAG-AAGTGCACAT-------AGTTTTG--CCCTCAGTAGATGCAT------------------GATT----------------------------------------------------------------TTTATA----GTTAT-----TTCAGTGTTATTTTTACCCAAAACTAA---CGA----------TTTTCTTT-------------------------------------T----CGA-----------TTTCATAGC------ATCATCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droKik1 scf7180000302643:663926-664159 - ATCTAAATAGAA-ATT-AA-TTTAAG-----TTT---------AACA-CAAGCAAAAAGTAGT--TT------GTTTA---------CCTT-----------T----T-------TTGTTAGAGCAACT-------------------------TGTGTGCACTTTAT------------------------------------A----GTAA--AA------------------------------------------A---GAG-AAGAGCACAT-------AGTTAG---CCCTCTGTAGTTGCAT------------------GTTATTTTC-------------------------------------------------------------CATT----TT-AT-----TTCT-----------TTCT-----------TGG---ATTAATTTTTACTCT-------------------------------------T----CAC-----------TTCCTTAGC------AACACCGATGGCGTCGATGCTGTCGATGGCGATGTCATCAATACCACGG
droAna3 scaffold_12916:9960701-9960902 - ATCCA--TAGAT-T-----------------------------------------------------------GTTTA---------AT-------------T----T-------TAGTTCGAGCATCT-------------------------TGT--GCACTTTAA------------------------------------A----GTTATGAT------------------------------------------T---CAA-ACGAGCACAT-------AGATTGC--CCCTCTGTAGCTGTAG------------------CATT----------------------------------------------------------------TT-GTTAATTA---TGAGAT-ACATTGT---TTTTTCCCAAAACTAA---TTG---A------CT----TT-------------------------------------T----TGT-----------GTCCACAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droBip1 scf7180000396580:1067578-1067777 + ATCCG--TAGAT-T-----------------------------------------------------------GTTTA---------AT-------------T----T-------TAGTTTGAGCATCT-------------------------AGT--GCACATTAA------------------------------------A----GTTATGAT------------------------------------------T---CTA-ACGAGCACAT-------AGATTG---CCCTTTGTAGCTGTAG------------------CATT----------------------------------------------------------------TT-GTTCATATTGAG---ATTCCTTTGT-TT---TGTCCCAAACTAA---TTG---A------TTT------------------------------------------T----TGT-----------GTCCACAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
dp5 4_group3:2687036-2687296 - ATCGA--TAGAA-GTA------TAAT-----TTTTCGG---TTCAG--AATGCA--TCGTAGA--TTAAATTAGA--------------TC---------AAT-----TT-----GATTTTGAGCAACA-------------------------TGT--GCACCTCTT------------------------------------ACATTGTCCCCAC------------------------------------------T---GTATATGGGCACAT-------GCTTAGT--CAGTCCATTCTTGCAT------------------GATTTTTGTCATTGTTAAATGTGTGTGTGATTTG-------------------------------------------------------------T-AT---GGGCCATAACTAA---TGT---A----------TATC-------------------------------------T----CGA---CTACCCCCTATTATAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droPer2 scaffold_1:4177859-4178119 - ATCGA--TAGAA-GTA------TAAT-----TTTTCGG---TTCAG--AATGCA--TCGTAGA--TTAAATTAGA--------------TC---------AAT-----TT-----GATTTTGAGCAACA-------------------------TGT--GCACCTCTT------------------------------------ACATTGTCCCCAC------------------------------------------T---GTATATGGGCACAT-------GCTTAGT--CAGTCCATTCTTGCAT------------------GATTTTTGTCATTGTTAAATGTGTTTGTGATTTG-------------------------------------------------------------T-AT---GGGCCATAACTAA---TGT---A----------TATC-------------------------------------T----CGA---CTACCCCCTATTATAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGG
droWil2 scf2_1100000004585:1075445-1075784 - ATTGA--TAGAACAAT-TTGTTGAATTTAGTTTTTGGT---TTCA-------------------------------------------ATT-----------TTTAGT-------TAGTTCATGCAACT-------------------------TAA--GCACACTCAACTGGAATTCATATATATTCTTGCTAATTTGTTGTTA----GTTGAAATTCATCCAACTATCTGTCCTAAAGCACTCGGATGAAATTCTTCT---AAC-AAGGGCAACTCTTCT----TTCAT--TCATTTATCGCTGTAGTGTTTAGTAGTAATGCATGTTGTTGTT----------------------CT-----------------------------------TT-ATTGATCA---TCCGAT---------CCATTGAATATATACTAA---TA------------------------------------------------CTAATTTATGGCCTTT-----------TTTCCCAAA---AACAGCAACGAAGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGG
droVir3 scaffold_12963:6393810-6394070 - ATTCA--TAGAA-AAT-TTGTTTAAT-----TTT-TAA---TTC----AACGTA--TCGTAGT--CTAGTTTAGT-TAACTTACATCTATTT---------TT-----TT-----GTTCTT--------TAATTACTAAGCAAATATTTGCACAAGT--ACAAACTCT------------------------------------A----GTTGCACT------------------------------------------T---GAT-CTAACTATGT-------AGCAT--------------------------------------ATT----------------------------------------------------------------TTTTCTA----TAAAC-----CCAA--------------------------T------------------------------ATGCATATAAAT-TTTTTTCTAATCC-T----CGAACTCTA-----CTCCATAGCCGCACCAACACCGATGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGG
droMoj3 scaffold_6500:25538295-25538587 - ATTCAA-TAGAA-AAT-TTGTTTAAT-----TTTGTCAA--TTTT---CAA-------GTAGT--TTAGTTT---------------CTTTTTTTCGTACGAT-----TTGATTTATGTTCGAGCAAAA---------------AACATGCACA--------------------------------------------------------------------------------------------------------------------AGTACAA-----------ATA--CTCTCAGTAGTTG--G------------------CAC--TTGACATAAATAAATATGTACATA---TATATATAGTATATCCTAGATATGTCTAGCATGCTTTCTATA----TATAT-----ATAG---CTCT------------------ATGA---T------CATTTC---------------------AATATTTTTACTAATCTATTT--GCT-----------ATTCACAGT------CGCAGCGATGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGG
droGri2 scaffold_15252:9621906-9622158 - ATTCA--TAGAA-CAG-TTGTTTAAT-----TTT-TAA---TTCA------ACG--TCGTAGT--TTAGTTT---------------TTT-------------------------GTTTTT---CATT-TAATTTCAAAGCAAATATTTGCACAAGT--ACAAACTGT------------------------------------A----GTTGCACT------------------------------------------T---GAT-CTCAAGAT------------CA---------AGTAA------------------------------------------ACA------------------------------------GTAGCATGCTTTGTATA----TTAAC-----TTAA------------------GCCAGTGATGG---T------CATCTTACTAATATTTATATGTATA--------------------T----CTG---CTGC----ATCCACAG---------TCCCGATGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGA---TTCTCACCATGCA--TCGTAGT--TGAAAAC---------------TATTT----------A----T-------TTATTTGAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGCTTGT--ACCCAATTAGTTGCAT------------------GATT----------------------------------------------------------------TGCATA----GTGAT-----TTCAAA--CATATTGAACATAAACTAA---TGA---A------CTTATTATTAT----------------------------------------TA-----------TTTATTAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCGATGGCGATGTCATCA.........2212.00200000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCGATGCTGTCG........................2411.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCAT...........2311.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCG.................................1511.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCGATGGCGATGTC.............1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGC...................1811.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGCTGTCGATGGCGATGTC.............2311.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCGATGCTGTCGATGG....................2811.00100010000000000000
droSec2
ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGA---TTCTCACCATGCA--TCGTAGT--TGAAAAC---------------TATTT---------------A-------TTGTTTGAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGTTTGT--ACCCAATTAGTTGCAT------------------GATT----------------------------------------------------------------TGCATA----GTGTT-----TTCAAA--CATTTTGAACATAAACTAA---TGG---A------CTTATTATTAT----------------------------------------TA-----------TTTATTAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCAT...........2311.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCGATGCTGTC.........................2311.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCGATGCT............................2011.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGGCGGCGATGCTGT..........................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGATGGCGATGTCAT...........1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGCGATGTC.............2411.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGGCGGCGATGCTGTCGATGGCG..................2911.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGATGGCGATGTCATCA.........2411.0010010
dm3
ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGAGTTTTCTCA-CATGCA--TCGTAGT--TGAAAAG---------------TATTT---------------A-------TTGTTTGAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGTTTGT--ACTCAATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----GTGCT-----TTAAAA--CATATTGAACATAAACTAA---TGG---A------CTTATAAT-------------------------------------T----CGA-----------ATCTTTAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGC...................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TCA-CATGCA--TCGTAGT--TGAAAAG---------------TATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTC.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGCGATGCTGTCGAT......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGCGATGCTGTCGATGGCGT.................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGATGGCGATGTCAT...........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
......................................................................................................................................................................AT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCA........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................AT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACGT-------AGT...........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGATGGCGATGTCAT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTGT--ACTCAATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----GTGC.................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGAGTTTTCTCA-CATGCA--TCGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGATGCTGTCGATGGCGAT................2211.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGATGCTGTCGATGGCG..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATAAACTAA---TGG---A------CTTATAAT-------------------------------------T----CGA-----------ATCTTT..........................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----GTGCT-----T..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGCGATGCTGTCGAT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCGATG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGGCGGCGATGCTGTC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................AAG-----TTTTTGAGTTTTCTCA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GCA--TCGTAGT--TGAAAAG---------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGGCGATGTCATCA.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACG......................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACG......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGCGATGT..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGG....................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGC------AACACCGATGGCGGCGAT...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................CAATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----GTGC.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACACCGATGGCGGCGATGCTGTC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGATGGCGATGTCATC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGGCGGCGAT...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGTTTTCTCA-CATGCA--TCGTAGT--T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----CGA-----------ATCTTTAGC------AACACCGATGGCGGC..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGCGATGCTGTCGATGGCG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGTCATCAATACCAC..1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGCGATGTC.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAT-------------------------------------T----CGA-----------ATCTTTAGC------AACACCGATGGC.....................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGATGGCGATGT..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGAAAC------------------------------------------T---GAA-AAGAGCACGT-------A.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGCGAT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAAG-----TTTTTGAGTTTTCTCA-CATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCGATGGCGATGTCATCA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGGCGGCGATGCTGTCGATGGC...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAT-------------------------------------T----CGA-----------ATCTTTAGC------AACACCGA.........................................2711.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGC------AACACCGATGGCGGCGATG..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTCGATGGCGATGTC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTGT--ACTCAATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----GTG..................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCA............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCGATGGCGATGTCATCA.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTTGT--ACTCAATTAGTTGCAT------------------GAT----------------------------------------------------------------------A----G....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCACG......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................TGAGTTTTCTCA-CATGCA--TCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCGATGGCGATGTC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAAACTAA---TGG---A------CTTATAAT-------------------------------------T----CGA-----------................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTTTCTCA-CATGCA--TCGTAGT--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AACATAAACTAA---TGG---A------CTTATAAT-------------------------------------T----CGA-----------A...............................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GTTTTCTCA-CATGCA--TCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGGCGGCGATGCTGTCGA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGGCGGCGATGCT............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGTCGATGGCGATGTC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................TTTCTCA-CATGCA--TCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCTA--TAGAA-ATT-GATTTTAAG-----TTCTTGA---TCCTCA-CATGCA--TCGTAGT--TTAAAAC--------------GTATTT-----------------------TTCTTTGA---ACA-------------------------TGT--GCACTTTAT------------------------------------A----GTTGA-AC------------------------------------------T---GAA-AAGAGCACAT-------AGTTTGT--AACCCATTAGTTGCAT------------------GACT----------------------------------------------------------------TGCATT----GTGTT-----TTCAAT--CATACTAAGCATTAGCTAA---TGA---A------TCTGCATC-------------------------------------T----CCA-----------ACCCATAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGT..............2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGGCGGCGATGCTGTCG........................2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGCGATGCTGTC.........................1811.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGC...................1811.0010000010
droYak3
ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTTGA---TTCTCA-CATGCA--TCGTAGTCTTGAAACC---------------TTTTT--TC----T-T----T-------TTGTTTAAACAACT-------------------------TGT--GCACTTTAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCATGT-------AGTTTGT--AACCCATTAGTTGCAT------------------GATT----------------------------------------------------------------TGCATA----GCCTT-----TTCAAT--CATATTTAACATTAGCTAA---TGG---A------CTTATATC-------------------------------------C----CGA-----------ATCTATAGC------AACACCGATGGCGGCGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTC.............2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCATC..........2411.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGATGCTGTCGATGGC...................1811.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGGCGGCGATGCTGTCG........................2311.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGCGATGCTGTCGATG.....................2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACACCGATGGCGGCGATGCTGTCGA.......................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGGCGGCGATG..............................1911.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCGATGGCGATGTC.............1811.00100001000000
.....................................................................................................................................................................TAT------------------------------------A----GTTGAAAC------------------------------------------T---GAA-AAGAGCAT.......................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGGCGGCGATGC.............................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGCGATGCTGTCGATGGCGA.................2611.00100100000000
..................................................................................................................................................................................................................................................................................TGT-------AGTTTGT--AACCCATTAGTTGC.......................................................................................................................................................................................................................................................................................2411.00100010000000
droEug1
ATCTA--TAGAA-ATT-GATTTTAAG-----TTTTCGT---TTCACA-AATGCA--TCGTAGT--TTTATAT------------------TC-----------------------ATTTTCGAGCAACC-------------------------TGT--GCACTTTCT------------------------------------A----GTCTTAAA------------------------------------------C---GAA-AAGAGCACAT-------AGCTTTT--CCCTGAGTAGTTGCAT------------------GATT----------------------------------------------------------------TTCATA----GTTAT-----TTTC---CTATCTGTCACATTTATTAA---TAG---A------TTTATTTT-------------------------------------T----CGA-----------ATCTATAGC------AACATCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
droBia1
ATCTA--TAGAA-ATT-GATTTTAAG-----TTT-TGT---TACACC-CATGCA--ACGTAGT--TA------GTTTG---------CCTT------------------------TGTTTTAAGCAACT-------------------------TAA--GCACTTTAT------------------------------------A----GTGGTAAA------------------------------------------A----CA-AGGAGCACGT-----GTAGTGTAT--CCCCCAGTAGATGCAT------------------GATT----------------------------------------------------------------TGTGTA----GATAC-----TGAAGTGCTATTTGATATATGAACTAA---TGG---A------TTTCT-TT-------------------------------------T----CCA-----------ACCCATAGC------CACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
droTak1
ATATT--TAGAA-ATTTGATTTTAAG-----TTCTTGT---TTCACA-CATGCA--TCGTAGA--TTAATAT----------------------------------------------------------------------------------TAT--GCACTTTAT------------------------------------A----TTTGTAAA------------------------------------------TGAAAAA-AAGAGCACAT-------TGTTTTT--CCCTCAGTAGTTGCAT------------------GATT----------------------------------------------------------------TACAAA----CAGAT-----CTCATTGCTATTTTTGACCTTTACTAA---TAG---A------TTTATCTT-------------------------------------T----CGA-----------ACCCATAGC------AACAGCGACGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
droEle1
ATCTA--TAGAA-GTT-GATTTTAAG-----TTTGTGT---T--ACA-CATGCA--TTGTAGT--TTTATAT--------------GAAGTT----------T----T-------TAGTTAAAGCAACT-------------------------TGT--GCACTTTAT------------------------------------G----GTTGTAAA------------------------------------------T---GAA-AAGAGCACAT-------AGTTATGACCCCTTAGTAGTTGCAT------------------GATT----------------------------------------------------------------TTTATA----GTGAT-----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATCTA--TAGAA-ATT-GATTTTAAG-----TTTGTGT---T--ACA-CATGCA--TTGTAGT--TTTACAT--------------ACCTTT---------TT-----TT-----GGTTTTGAGCAACT-------------------------TGT--GCACTTTAA------------------------------------A----GTTGTAAA------------------------------------------C---GAA-AAGAGCACAT-------AGTCTTG--CCCCCAGTAGTTGCAT------------------GATT----------------------------------------------------------------TTCATA----GTAAT-----TTCCTTACTATGTGGCACTTTAACTAA---TTGGTGT------TTTATTTC-------------------------------------T----CGA-----------AACCATAGC------AATACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
droFic1
ATCTA--TAGAA-ATT-G-TTTTAAG-----TTTGTGT---TTTGCA-CATGCA--ACGTAGT--TTTAATCTG-------------AATTT----------T----T-------TCGTTTGAGCAACT-------------------------TGT--GCACTT-GT------------------------------------A----GATTCCAA------------------------------------------C---GAG-AAGTGCACAT-------AGTTTTG--CCCTCAGTAGATGCAT------------------GATT----------------------------------------------------------------TTTATA----GTTAT-----TTCAGTGTTATTTTTACCCAAAACTAA---CGA----------TTTTCTTT-------------------------------------T----CGA-----------TTTCATAGC------ATCATCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
droKik1
ATCTAAATAGAA-ATT-AA-TTTAAG-----TTT---------AACA-CAAGCAAAAAGTAGT--TT------GTTTA---------CCTT-----------T----T-------TTGTTAGAGCAACT-------------------------TGTGTGCACTTTAT------------------------------------A----GTAA--AA------------------------------------------A---GAG-AAGAGCACAT-------AGTTAG---CCCTCTGTAGTTGCAT------------------GTTATTTTC-------------------------------------------------------------CATT----TT-AT-----TTCT-----------TTCT-----------TGG---ATTAATTTTTACTCT-------------------------------------T----CAC-----------TTCCTTAGC------AACACCGATGGCGTCGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
droAna3
ATCCA--TAGAT-T-----------------------------------------------------------GTTTA---------AT-------------T----T-------TAGTTCGAGCATCT-------------------------TGT--GCACTTTAA------------------------------------A----GTTATGAT------------------------------------------T---CAA-ACGAGCACAT-------AGATTGC--CCCTCTGTAGCTGTAG------------------CATT----------------------------------------------------------------TT-GTTAATTA---TGAGAT-ACATTGT---TTTTTCCCAAAACTAA---TTG---A------CT----TT-------------------------------------T----TGT-----------GTCCACAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGG---CGATGCTGTC.........................2012.002010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGG---CGATGCTGTCGATGGC...................2112.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGATGCTGTCGATGGC...................1812.002011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGATGCTGTCGATGGCGATGTC.............2412.002020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGG---CGATGCTGT..........................1912.002010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGC..............2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---CGATGCTGTCGATGGC...................1911.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACACCGATGG---CGATGCTGTC.........................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGG---CGATGCTGTCG........................2211.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CGATGCTGTCGATGGCGATGTCA............2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGG---CGATGCTGTCGATGGCGATGTC.............2711.001010000
droBip1
ATCCG--TAGAT-T-----------------------------------------------------------GTTTA---------AT-------------T----T-------TAGTTTGAGCATCT-------------------------AGT--GCACATTAA------------------------------------A----GTTATGAT------------------------------------------T---CTA-ACGAGCACAT-------AGATTG---CCCTTTGTAGCTGTAG------------------CATT----------------------------------------------------------------TT-GTTCATATTGAG---ATTCCTTTGT-TT---TGTCCCAAACTAA---TTG---A------TTT------------------------------------------T----TGT-----------GTCCACAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotal
No Reads
dp5
ATCGA--TAGAA-GTA------TAAT-----TTTTCGG---TTCAG--AATGCA--TCGTAGA--TTAAATTAGA--------------TC---------AAT-----TT-----GATTTTGAGCAACA-------------------------TGT--GCACCTCTT------------------------------------ACATTGTCCCCAC------------------------------------------T---GTATATGGGCACAT-------GCTTAGT--CAGTCCATTCTTGCAT------------------GATTTTTGTCATTGTTAAATGTGTGTGTGATTTG-------------------------------------------------------------T-AT---GGGCCATAACTAA---TGT---A----------TATC-------------------------------------T----CGA---CTACCCCCTATTATAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCAT...........2311.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGG---CGATGCTGTCGATGGCGATGT..............2511.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGG---CGATGCTGTCGATGG....................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTC.............2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGATGCTGTCGATGGCGATGTC.............2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---CGATGCTGTCGATGGCGA.................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---CGATGCTGTCGATGGC...................1911.0010100000000
........................................................................................................................................................................................................................C------------------------------------------T---GTATATGGGCACAT-------GCTT..........................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATGGCGATGTCATCAAT.......2111.0010100000000
......................................................................................................T-----TT-----GATTTTGAGCAACA-------------------------TGT--G..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---CGATGCTGTCGATGGCGAT................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGT..............2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGG---CGATGCTGTC.........................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGG---CGATGCTGTCGAT......................2211.0010000010000
droPer2
ATCGA--TAGAA-GTA------TAAT-----TTTTCGG---TTCAG--AATGCA--TCGTAGA--TTAAATTAGA--------------TC---------AAT-----TT-----GATTTTGAGCAACA-------------------------TGT--GCACCTCTT------------------------------------ACATTGTCCCCAC------------------------------------------T---GTATATGGGCACAT-------GCTTAGT--CAGTCCATTCTTGCAT------------------GATTTTTGTCATTGTTAAATGTGTTTGTGATTTG-------------------------------------------------------------T-AT---GGGCCATAACTAA---TGT---A----------TATC-------------------------------------T----CGA---CTACCCCCTATTATAGC------AACACCGATGG---CGATGCTGTCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTAA---TGT---A----------TATC-------------------------------------T----CGA---CT......................................................................2212.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTCAT...........2311.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCTGTCGATGGCGATGT..............2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGTCGATGGCGATGTC.............2111.001001000
.................................................ATGCA--TCGTAGA--TTAAATTAGA--------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---CGATGCTGTCGATGGCGATGTC.............2511.001010000
droWil2
ATTGA--TAGAACAAT-TTGTTGAATTTAGTTTTTGGT---TTCA-------------------------------------------ATT-----------TTTAGT-------TAGTTCATGCAACT-------------------------TAA--GCACACTCAACTGGAATTCATATATATTCTTGCTAATTTGTTGTTA----GTTGAAATTCATCCAACTATCTGTCCTAAAGCACTCGGATGAAATTCTTCT---AAC-AAGGGCAACTCTTCT----TTCAT--TCATTTATCGCTGTAGTGTTTAGTAGTAATGCATGTTGTTGTT----------------------CT-----------------------------------TT-ATTGATCA---TCCGAT---------CCATTGAATATATACTAA---TA------------------------------------------------CTAATTTATGGCCTTT-----------TTTCCCAAA---AACAGCAACGAAGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGG---CGATGCTGCCGATGGCGA.................2512.00200020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAGG---CGATGCTGCCGATGGCGAT................2812.00200200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAAGG---CGATGCTGCCGATGGC...................2412.00200020
.........................................................................................................................................................................................................................................................GAAATTCTTCT---AAC-AAGGGC.........................................................................................................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................ATGAAATTCTTCT---AAC-AAGGGC.........................................................................................................................................................................................................................................................................................................................2211.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCAAA---AACAGCAACGAAGG---C..................................2311.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAGG---CGATGCTGCCGATGGC...................2511.00100010
droVir3
ATTCA--TAGAA-AAT-TTGTTTAAT-----TTT-TAA---TTC----AACGTA--TCGTAGT--CTAGTTTAGT-TAACTTACATCTATTT---------TT-----TT-----GTTCTT--------TAATTACTAAGCAAATATTTGCACAAGT--ACAAACTCT------------------------------------A----GTTGCACT------------------------------------------T---GAT-CTAACTATGT-------AGCAT--------------------------------------ATT----------------------------------------------------------------TTTTCTA----TAAAC-----CCAA--------------------------T------------------------------ATGCATATAAAT-TTTTTTCTAATCC-T----CGAACTCTA-----CTCCATAGCCGCACCAACACCGATGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCGATGGCGATGTCAT...........2012.002000100000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TTTTTTCTAATCC-T----CGAAC.........................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCGATGG---CGATGCTGCCGATG.....................2511.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGG---CGATGCTGCCG........................2111.001000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TTGCACT------------------------------------------T---GAT-CTAACTATGT-------AGCA..........................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................TATTTGCACAAGT--ACAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGG---CGATGCTGCCGATGGC...................2511.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCCGATGGCGATGTCATCAATA......2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCGATGG---CGATGCTGCC.........................2011.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGG---CGATGCTGCCGATGGCGATGT..............2711.001000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCATCAATACCACGG1911.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATGG---CGATGCTGCCGATGGCGA.................2711.001000000000000000000000000000000100000000000000000000000000000000
...........................................................TAGT--CTAGTTTAGT-TAACTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................CAAGT--ACAAACTCT------------------------------------A----GTTGCA...................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-T----CGAACTCTA-----CTCCATAG........................................................1911.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCACCAACACCGATGG---CGA................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCTGCCGATGGCGATGT..............2111.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
ATTCAA-TAGAA-AAT-TTGTTTAAT-----TTTGTCAA--TTTT---CAA-------GTAGT--TTAGTTT---------------CTTTTTTTCGTACGAT-----TTGATTTATGTTCGAGCAAAA---------------AACATGCACA--------------------------------------------------------------------------------------------------------------------AGTACAA-----------ATA--CTCTCAGTAGTTG--G------------------CAC--TTGACATAAATAAATATGTACATA---TATATATAGTATATCCTAGATATGTCTAGCATGCTTTCTATA----TATAT-----ATAG---CTCT------------------ATGA---T------CATTTC---------------------AATATTTTTACTAATCTATTT--GCT-----------ATTCACAGT------CGCAGCGATGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGCCGATGGCGATGTCAT...........2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGT------CGCAGCGATGG---CG.................................2111.001000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG---CGATGCTGCCGATGGCGATGTC.............2511.001100000
droGri2
ATTCA--TAGAA-CAG-TTGTTTAAT-----TTT-TAA---TTCA------ACG--TCGTAGT--TTAGTTT---------------TTT-------------------------GTTTTT---CATT-TAATTTCAAAGCAAATATTTGCACAAGT--ACAAACTGT------------------------------------A----GTTGCACT------------------------------------------T---GAT-CTCAAGAT------------CA---------AGTAA------------------------------------------ACA------------------------------------GTAGCATGCTTTGTATA----TTAAC-----TTAA------------------GCCAGTGATGG---T------CATCTTACTAATATTTATATGTATA--------------------T----CTG---CTGC----ATCCACAG---------TCCCGATGG---CGATGCTGCCGATGGCGATGTCATCAATACCACGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 11:07 AM