ID:dsi_18585 |
Coordinate:3r:10174146-10174209 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -4.3 | -4.1 | -3.9 |
 |
 |
 |
CDS [3r_10174124_10174145_+]; five_prime_UTR [3r_10173966_10174123_+]; exon [3r_10173966_10174145_+]; exon [3r_10174210_10175768_+]; CDS [3r_10174210_10175738_+]; intron [3r_10174146_10174209_+]
No Repeatable elements found
| ##################################################----------------------------------------------------------------################################################## GCAGGCCTATAGGACAAACAAATACATCATGAAAGACACCCAAGTCAAAGGTGCGAGGCCGTCAAAGCTTTTATTTCCTGGTAATGATTACTTATTTATCCCATCTCAAGTTAGACAACACCACAGAGGAGGAGCCCGTGAAGGAGGCAGCTGAGGTGCCGGCC **************************************************.(((.(((..................))).)))...............................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR553485 Chicharo_3 day-old ovaries |
O001 Testis |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
M024 male body |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................AGTCAAAGGTGCGAGGCCGTCAAAGC................................................................................................ | 26 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................AAATAGATCATGAAAGACACCGAAGT....................................................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................CTTTTATTTCCTGGTAATGAT............................................................................ | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........TAGGACAAACAAATACATCATGAAAGA................................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................CCACAGAGGAGGAGCCC........................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..................................................................................................................................GGAGCCCGTGAAGGA................... | 15 | 0 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................TTTATACGAACTCAAGTTAG.................................................. | 20 | 3 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................GAAGGAGGCTGCTGAGAT....... | 18 | 2 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................................................................................CCCGTGATGGAGGCGGCCG........... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
|
CGTCCGGATATCCTGTTTGTTTATGTAGTACTTTCTGTGGGTTCAGTTTCCACGCTCCGGCAGTTTCGAAAATAAAGGACCATTACTAATGAATAAATAGGGTAGAGTTCAATCTGTTGTGGTGTCTCCTCCTCGGGCACTTCCTCCGTCGACTCCACGGCCGG
**************************************************.(((.(((..................))).)))...............................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
M023 head |
M053 female body |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................CTGTGGGTTCAGTCTCCA................................................................................................................ | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................................AAAAAAGGACCACTACTAATA......................................................................... | 21 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................AATAGGGTAGAGTTAA..................................................... | 16 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................TAGTACTTTCTCAGGCTTC........................................................................................................................ | 19 | 3 | 19 | 0.11 | 2 | 0 | 0 | 2 | 0 | 0 |
| ...........................................................................................CATAAATTGGGTTGAGTTCA..................................................... | 20 | 3 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 |
| ....................TTAAGTAGTACTTCCTG............................................................................................................................... | 17 | 2 | 17 | 0.06 | 1 | 0 | 0 | 0 | 0 | 1 |
| ...............................................................................................AATAGGGTCGAGTGCAA.................................................... | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:35 AM