ID:

dsi_18579

 Coordinate:

3l:9234966-9235240 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [3l_9235241_9235365_+]; three_prime_UTR [3l_9234348_9234965_+]; exon [3l_9233515_9234965_+]; exon [3l_9235241_9235995_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCCAGAAAATATATATACACAACTAGCAAGAAGCGATTGAGAGAAAATCGATTTGAATGTTGTTTTTACTTGAGATTTATTGCCTGCGTCGCGCCTCTGCATTTGCGCTAAACCAATTAATACAGAGGAGAACTTTCATTTTCTTGAAGCTTCCAATTGAAAATTGAAAAGAGAACGCAATGTTGCACCTAATGGTCATAGTTCTCCTTCACCTTGGGGCAATATAATTAATCAAATCATGCAGCGCCAAGGAAAACATGCGATTCAAGTAAAAAATCGCCTTTGATTTTCAGCCTTAATCTGTATTTTATCTTATCCTAATATAGATTTTTATTTATTCTTTAAACATTGTATAAATATTATTTTACTTTTTGA
*************************************************************************************************************************************************************************************************************************************************.((.((...(((((.((.((((((.........))))))...)).))))).)))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 GSM343915
embryo
 M024
male body
.........................................................................................................................................................................TGAGAACACAATGCTGCACCT......................................................................................................................................................................................... 21 3 4 32.75 131 117 11 0 0 3 0 0 0 0
..........................................................................................................................................................................GAGAACACAATGCTGCACCT......................................................................................................................................................................................... 20 2 2 3.00 6 6 0 0 0 0 0 0 0 0
....................................................................................................ATTTGGGCTAAACCAATT................................................................................................................................................................................................................................................................. 18 1 2 2.50 5 0 0 5 0 0 0 0 0 0
....................AACTAGCAAGAAGCGATTGAGAGA........................................................................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CCTTTGATTTTCAGCCTT.............................................................................. 18 0 1 2.00 2 0 0 0 0 0 0 2 0 0
..CAGAAAATATATATACAC................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0
.............TATACACAACTAGCAAGAAGCGATTGAGA............................................................................................................................................................................................................................................................................................................................................. 29 0 1 2.00 2 1 0 0 0 0 1 0 0 0
.....AAAATATATATACACAACTAGCAAGA........................................................................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CAGCGCCAAGGAAAACA..................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................ACAACTAGCAAGAAGCGATTGAGAGA........................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................TAGCAAGAAGCGATTGAGAGAAAATC...................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...............TACACAACTAGCAAGAAGCGATTGAGAGA........................................................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.......................TAGCAAGAAGCGATTGAGAGAAAA........................................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
........................AGCAAGAAGCGATTGAGAGAAAATCGAA................................................................................................................................................................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................GTAGCGCCTCTGCATT................................................................................................................................................................................................................................................................................ 16 1 1 1.00 1 0 0 0 0 1 0 0 0 0
..............ATACACAACTAGCAAGAAGC..................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.............TATACACAACTAGCAAGAAGCGAT.................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GAGAACACAATGCTGCACCTC........................................................................................................................................................................................ 21 3 3 0.67 2 2 0 0 0 0 0 0 0 0
....................................................................................................ATTTGGGCTAAACCAATTA................................................................................................................................................................................................................................................................ 19 1 2 0.50 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CCTTGGGGCTATATGATCAA................................................................................................................................................ 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0
.............................................................................................GCGCTGGATTTGCGCTAAAC...................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0 0 0 0
....................................................................................................ATTTGGGCTACACCAATT................................................................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TTTTTATTTTATCTTATCCTA....................................................... 21 2 7 0.14 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................CCTGCGATCCGAGTAAAAAA................................................................................................... 20 3 15 0.07 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................CTTTTCTTGATGCTTCCA............................................................................................................................................................................................................................ 18 2 16 0.06 1 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................ATTGAAACGAGAACGAAAT.................................................................................................................................................................................................. 19 2 17 0.06 1 0 1 0 0 0 0 0 0 0
.................................CGATTGAGAGTAACTCGC.................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................TAGCAAATCGCCTTTGATT....................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0 0 0 0
.....................................................TGGATGTTGTTTTTAATTGG.............................................................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGGTCTTTTATATATATGTGTTGATCGTTCTTCGCTAACTCTCTTTTAGCTAAACTTACAACAAAAATGAACTCTAAATAACGGACGCAGCGCGGAGACGTAAACGCGATTTGGTTAATTATGTCTCCTCTTGAAAGTAAAAGAACTTCGAAGGTTAACTTTTAACTTTTCTCTTGCGTTACAACGTGGATTACCAGTATCAAGAGGAAGTGGAACCCCGTTATATTAATTAGTTTAGTACGTCGCGGTTCCTTTTGTACGCTAAGTTCATTTTTTAGCGGAAACTAAAAGTCGGAATTAGACATAAAATAGAATAGGATTATATCTAAAAATAAATAAGAAATTTGTAACATATTTATAATAAAATGAAAAACT
******************************************************************************.((.((...(((((.((.((((((.........))))))...)).))))).)))).************************************************************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M053
female body
 M025
embryo
 GSM343915
embryo
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAGTCGGAA.............................................................................. 18 1 3 69.33 208 158 48 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................GGAAATTCAAAGTCGGAA.............................................................................. 18 2 13 9.69 126 75 29 1 4 3 9 0 4 1 0
........................................................................................................................................................................................................................................................................................GAAACTCAAAGTCGGAAT............................................................................. 18 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGGAAACTCAAAGTCGGAA.............................................................................. 19 2 5 2.40 12 10 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GAAACTCAAAGTCGGA............................................................................... 16 1 6 1.67 10 0 0 7 2 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GAAACTCAAAGTCGGAA.............................................................................. 17 1 4 1.50 6 0 0 5 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGGAAACTCAAAGTCGGA............................................................................... 18 2 10 1.40 14 14 0 0 0 0 0 0 0 0 0
.............................CTTCGCTGACTCTCT........................................................................................................................................................................................................................................................................................................................................... 15 1 15 1.07 16 0 0 1 4 7 0 4 0 0 0
.........................................................................................................................................................................................................................................................................................AAACTCAAAGTCGGAAT............................................................................. 17 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................ATAAATTAGAAATTTGTAACATAAT................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GAAACTCAAAGTCGGAATTT........................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAGTCGGA............................................................................... 17 1 4 0.50 2 0 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................AAACTCAAAGTCGGAA.............................................................................. 16 1 16 0.44 7 0 0 5 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAGTCAGAA.............................................................................. 18 2 15 0.40 6 0 0 0 4 0 2 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAGTCGG................................................................................ 16 1 9 0.33 3 0 0 1 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAGTCGGAACT............................................................................ 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAATCGGAA.............................................................................. 18 2 17 0.29 5 0 0 1 4 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGGAAACTCAAAGTCGGAATC............................................................................ 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAAGTCG................................................................................. 15 1 20 0.25 5 0 0 1 4 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TTTTAGCGGAAACTAAG...................................................................................... 17 1 11 0.18 2 0 0 0 0 0 0 2 0 0 0
........................................................................................................................................................................................................................................................................................GAAACTCAAAGTCGGAACT............................................................................ 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGGAAATTCAAAGTCGGAA.............................................................................. 19 3 20 0.15 3 2 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................GGAAGCTCAAAGTCGGAA.............................................................................. 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................AGAAACTCAAAGTCGGAA.............................................................................. 18 2 15 0.13 2 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................ACTCAAAGTCGGAAT............................................................................. 15 1 15 0.13 2 0 0 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................GAAACTCAAAGTCGG................................................................................ 15 1 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GGAAACTCAAATTCGGAA.............................................................................. 18 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................TCATTGTTTAGCGGAAACT......................................................................................... 19 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................AATTTGTTTAGTAGGTGGCG................................................................................................................................ 20 3 13 0.08 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................CAAAAAATAGATTAGGAT....................................................... 18 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0
...............................TCGCTGACTCTCTTATATC..................................................................................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................GAAACTTAAAGTCGGAAC............................................................................. 18 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................CGATTTGGTTAATGTTGT........................................................................................................................................................................................................................................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................CTCTTGTGTTACGACGT............................................................................................................................................................................................ 17 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................CATTGTTTAGCGGAAA........................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9234916-9235290 + dsi_18579 CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GAA------GC-TTCCAATTGAAAATTGAA--AAGAGAACGCA-ATGTTG-----CACCTAATGGTCATA---GTTC-TCCTTCACCTTGGGG----CAA--------TATAATTAA---TCAAA-------TCATGCAGCGCCAAGGAAAACA--------TGCGATTCA-AG------TAAAAAATCGCCTTTGATTTT-------------------CAGCCT-----TAATCTGTATTTTATC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTAATATAGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TT------ATTTAT------------------------------------------------------TCTTTAAACATTGTATAAATAT-TATTTTAC-T--TTTTG----------------------------A
droSec2 scaffold_0:1706829-1707207 + CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-T-AGAGGAGAACT-----TTCATTTTCTT---TAA------GC-TTCCAATTGAAAATTGAA--AAGAGAACGCA-ATGTTG-----CACCTAATGGTCATA---GTTC-TCCTTCACCTTGGGG----CAA--------TATAATTAA---TCAAA-------TCATGCAGCGCCAAGGAAAACA--------TGCGATTCA-AG------TAAAAAATCGCATTTGATTTT-------------------CAGCCAA-GCACAATCGGTATTTTATC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTAATATAGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TT------ATATAT------------------------------------------------------TCTTTAAACATTGTATAAATAT-TATTTTAC-T--TTTTG----------------------------A
dm3 chr3L:9465648-9466080 + CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GGG------AC-TACCAATTGAAAATGGAA--AAGAGAATGCA-ATGTTAATGGTCACTTAATGGTCATA---GTTCCTCCTTCACCTTGGTG----CAA--------TATAATTAA---TCAAA-------TCATACAGCGCCAAGGAAAACA--------TGCGATTCA-AG------TAAAAAATCGCCTTTGATTTT-------------------CAGCCAA-GCACAATCGATATTTTATC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTACTATAAATTACTTAACAGA-A--TTTATTGATTCAT--------------------------------------------------------------------------------------------------------------------------------ATTT---------------TT------ATTTAT----------------------T------TTTAAATGTAA-TGAACTTTAGTTA----TAAATATAGTAGAAATGT-TATTTTAC-T--TTGTG----------------------------A
droEre2 scaffold_4784:9457402-9457872 + CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTCGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GGG------AC-TTCCAATTGA-------A--AAGCGAATGCG-ATGTTG-----CACTAAATGGTTATAGTAGTTC-TCCTTCACCTTGGGC----CAA--------TATAATTAACGT------------TCATTCAGCGCCAAGAAAAACA--------TGCGATTCA-AC------TAAAATATCGCCTTTGATTTT-------------------CAGCCAA-GCACAATCGGTATTTTATT--TAACTTTTCCAAATC----TGCAAAAATAGTAC--GAACC-------------------------------AAGAACCACA---------------------------------------------------------------ATCCTACTATATATTTCTTTACAGA-A--TTTATTGATTTATA-----------------------------------------------------------------------------------------------------------------------------ATATTT---------------TT------ATTAA-----------------------T------TTCAAATGTAG-CGAAC----------------------ACAAATG-----TTTAC-T--TTTTGTGTTGTACAAAAACTGAAGAATATTTGTA
droYak3 3L:2458052-2458454 - CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAGGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GGG------GC-TTCCAATTGA-------A--AAGCGAATGCA-ATGTTG-----CACTAAATGGTTATA---GTTC-TTCCTCACCTTGGTG----CAA--------TATAATTAACGA------------TCATTCAGCGCCAAGGAAAACA--------TGCGATTCA-AA------TAAAAAATCGCCTTTGATTTT-------------------CAGCCAA-GCACAATCGGTATTTTATC--TAACTTTTCCGA---------------CAGTATAACAACC-------------------------------AAGAACTACA---------------------------------------------------------------ATCCTTCTATTAAATTATTTACAGA-C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAAAATTTAAAAAAATTC-TATA-TAA-T--TTGTG----------------------------A
droEug1 scf7180000409711:1329321-1329707 + CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAGC---TAGCAAGA--AGCGATTGAGAA-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGA-------CAATTAACA-A-AGAGGA-AACT-----TTCCATTTCGT---CGG------TT-TTCCAATTGA-------A--AAGTCATTGT---TGTTG-----CATTGTTTGGTTATA---GTTT-TCCTTTACCTGGGGG----CAA--------TTTAATCACCGA------------TCATTTCCAGCCAAGAACAAC---------------------------TTTAAAATCGCATTTGAT-------------------------------------CGGAATTTAAAA--TAACTTTACTAA---------------A--------------------------------------GATAT-----------------------------------------------AGAAAATGCTTTGGTAACGATTGAA--------------------------AATACA----------------------------------------------------------------------------------------TTTTGATTTTA---------------GTCTTTTCCAAAGTCT---TCTAATTTTT---------------TT------TGTAA-----------------------T------TTC----GTTA-CC-------AA----------------------------------CAA--TTA----------------------------A
droBia1 scf7180000302428:8310634-8310974 - CCCA--------------------GAA--AATAT----------------------------------A----TATA------AC--ACACC---TAGCAAGA--AGCGATTGGAAG-AA-AATCGATTCG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGT-------CAATTAACGAA-AGAGGAAAACT-----TTC-----CCT---CGG------GT-TTCCAATTAA-------A--AAGCGATTGCA-ATGTAG-----CAATAAAT-------------------TCGCCCCAAGGTGAACTA--------TGTAAACATCGA------------TCATCCCGAGCCAAGAACATCA--------AGAGATGCA-AA------TGAAAGA----------------------------------------------------------------------------------------------------------------------------------CAT-----------------------------------------------GGAATATGTATCTGAAGCATTTGAA--------------------------A----------------------------------------------------------------------------------------------------------TCCCA------------------AA--CT---TGCGGTT--T---------------TT------CC------------------------------------------------------AACTTATTTTAATAT----TAAGTTGGTGTTTTAT-TGG--CTG----------------------------A
droTak1 scf7180000415664:165890-166312 - CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGT-------CAATTAATA-A-AGTGGAAAACT-----TTCCTTCTCTG---CGG------GT-TTCCAATTAA-------A--AAGCGATTGCAAATGTTG-----CAATGAATGGTTATA---GATT-TCTTTCACCTTGGGG----CCAT-------TTTTATCATCTA------------TCATCCCGAGCCAAGAACACCA--------TGCGATGAA-AG------CTCAAA------------------------------------------------TTGGTATTTTATT--CAAGTTTTAAAAAA------------------------------------------------------CA---------------------------------------------ATCGGAAAATGTATTTTAAACTATTGAA--------------------------A----------------------------------------------------------------------------------------------------------ACCTACAACTTTTGTCTTACTTACAGCGCAGTTGAA--ATTTTTATTTAATTATTATTTAG--------------------------------TAAAAGGTAATAATGGAA-TGTATATTAGTT-------------------------------A-T--TTTCA----------------------------A
droEle1 scf7180000490564:233994-234254 + CCCA--------------------GAA--AATAT----------------------------------A----T---------AC--ACACC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTAAG---ATTTATTG--CCTGCGTC---GCGACTCTGCATTTGCGCTAAGC-------CAATTAATA-A-AGAGGAAAAGT-----TTCCTTTTCTA---TGG------TC-TTGCAATTGA-------A--GAGCGATTGCA-ATATTG-----CAATAAATGCTTTTA---GTTT-TCCTTCACCTCGGGG----ACA--------TTTAATCATCGA------------TCAGTGCGAG-------------------------------C------TTAAAAATCGCCTTTGACTTT-------------------CAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780168:52604-52948 - CCCA--------------------GAA--AATAT----------------------------------A----T---------AC--ACACC---TAGCGAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTAAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGC-------C-------------------------------TTTTCTT---CGG------TC-TTGCAATTGA-------A--AAGCGATTGCA-ATATTG-----CAATAAATGGTTATT---ATTT-TCCTTAACCTCGGGG----CAC--------TTCAATCATCGA------------TCATTCCGTGCCAAGAAAAACA--------TACGGTGCGAAT------TAAAAAATCGCCTTTGATTTT-------------------CAACGGA-GCAGATTTGATACCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTAATTT------TGTTGAAACATTTTTCTAAGACACATACAAAATATTAAAGGTAATA--------------------------------------------------T-T--TCTAA----------------------------A
droFic1 scf7180000453807:609831-610312 + CCCA--------------------TAA--AATAT----------------------------------A----TAT-------AC--ACATC---TAGCAAGA--AGAGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGT-------CAATTAACG-A-AGAGCTGAACT-----TTCCTTTTCTT-----------------GCAATTGA-------A--AAGCGA-TGCA-GTATTG-----CATTGCGCGGTTATA---GTTT-TCCTTCACCATGGGG----CAA--------TTTTATCATTGA------------TTT----AAGCCAG---ACAGA--------TGCGA-----AC------TAAAAAATCGCCTTTGAATTT-------------------CAGCAAAAATGGATTCGGAATTTTATATTTAA-TTTTCCAAAACGTTTTGCT-------------------------------------TAGAAT-----------TGTAG---------------AAAAATTCTAAATAGAAAATTGGAAAATTCT--GGGA------------------------------------A--TGTATTGATTTTTAGTTTTTGTAAAATTAAATTATAAACTTGTTTCTAGCGACAAATTCCATTTAGTGCTAGTATTTCCTTGGGGAAACATTTTGGTTTTAAAACCTTTACCTT------------------------------T-------------------------------------------------------------------------------------------------------------------TTA--TTG----------------------------A
droKik1 scf7180000302486:2227047-2227504 - CCCA--------------------GAA--AATAT----------------------------------A----TAC-------AA--A---------AAAAAA--CTAGATTGAGAG-AA-AATCGAATCG-A-------------TTTGAGATTTTTTATTG--CCTGCGTCGTCGTGCCTCTGCATTTGCGCTCAGTTCAAGTTCAATTAATTAATGGAGAAAAACGCACGCTCCCTTCTCCT---GGGGTTAGGTT-TTCAAATTCA-------AAGAAGCAATTGCC-ATATTG-----CAATGATTGGTAATA---ACTCTTTCCTCACCTTGTGA----TTGGTTGGTTATA------C---GCAAGCCGTGGAGTAGTCAGAGCCAAGGATTACAGGGAATAATGCAGTGCATACTTTATTAAAAAAATCGCCTTTGTTTTT-------------------AAGCTT-----------------------------TTTTAA---------------CAATGT-----CAATAAACTTTACTGCATTATTTAAAATGAAATGAAAATTGCATGGTAATTAGTGAAGT----------------------------------------------TTTTAA--------------------AATATA----------------------------------------------------------------------------------------AATTAATATTA---------------TTTTATTT----------------------------------------------------------------------------------AAACGTAGGTTAT------------------------TATATAT-GACA---A-T--CTTTT----------------------------A
droAna3 scaffold_13337:3718617-3718881 + GCCA--------------------GAA--AATAT----------------------------------A----TAT-------ACACACACCT--TAGCATGAAAAGCGATTGAAAG-AA-AATCGATTCCTGTT-CTTTTTCTTACTTGTG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGC-------TAAT-ATCG----AAGGATACCA-----TTAGTTATCCT---TGT------GCAT--------------------AGCAATT---------G-----CAATGATTGGCAACC---ATTT-CC--CAACCTCCTTC----TGT--------TTCAATCATCGT------------TGTCTCCGAGTCATG------------------------------------AAAATCGCCTTTGATTTTTTTAAAAAAGAGGGTAATCCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395954:118910-119052 + TCTG--------------------AAA--AATAT----------------------------------A----T---------AC--ACACCT--TAGCGTCG--TGCGATTGAAAG-AA-AATCGATTCG-------TGTTCTGACTTGTG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGC-------TAAT-ATCG----AAGGAAAACT-----CACCTAGTTTTCCTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
dp5 XR_group8:2358951-2359108 + CACACACACACACACACACACACAGAA--AATAT----------------------------------A----TATA-----TAT--ATACA---TAGCGGAA--AGCGATTGAGAACAA-AATCGATTGGAAAT-GTTGTTTCTTCTTGAG---ATTTATTG--CCTGCCATTGGGCGCCTCTGCATTTGCGCTAAGC-------CA-TTAATA-A-TGGGACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_24:696657-696792 - CACA--------------------GAA--AATAT----------------------------------A----TAT-------AT--ATACA---TAGCGGAA--AGCGATTGAGAACAA-AATCGATTGGAAAT-GTTGTTTCTTCTTGAG---ATTTATTG--CCTGCCATTGGGCGCCTCTGCATTTGCGCTAAGC-------CA-TTAATA-A-TGGGACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004768:2265684-2265929 + CACAC-CACACAAACAAAAAC-CATAATAGATATGTATATATGTATGTATATTAATATATATATATATAAATACAT-ACATGCAT--ATATA---AAGCAGAA--AACAATTGAGAACAAAAAGTTGTTAA-AATTTTGTTTATTATTCTAA---ATGAATTG--CCTGCTTTACGCCGCCTCTGCATTTGTGCTCGGT-------CATTATGTA-T-GTGGGTGGG------------------------------------------------GAG--GGGAGAGTGGG-ATTTTT-----ATGTTAATGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------A-AGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAA---------A
droVir3 scaffold_13049:8286482-8286601 - AACAAATAT-----------------A--CATAT------------------------------ATCTA----TAT-------AC--ATACA---TAGCAAAAA-AAAAAACAACAA-AA-AAAAGGTTTA-T----TTATTTTGAATGAGT---ATTTATTGAGCCTGTTCTCGCGTAACCCTGCATTTGTGCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:20371842-20371941 + AATT--------------------AAA--AAACT------------------------------------------------------------------------------------------TGAATTA-ACA-GTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----TACTA--TTTTTTATA--T----------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAAAC--------------------TATATT------------------------------------------------------------------------------------------------------------------------------------------T---------------AT------CTTTCT------------------------------------------------------TTTTTATAATTTATATAAATAT-GTTA---T-TAT--TTT----------------------------T
droGri2 scaffold_15252:6800547-6800703 - CTTCATCTTGAGG-----------TAA--AATAG----------------------------------T----T---------GC--AGCATTAACAAAGAAA--ACCTGTTGGAAT-AA-CATGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGAATTTACTCCG-------------------CAGTCA-----TGATTAATATTGTCTA--T----------------------------------------------------------------------------------------------------------------------------------------------TGTTATACTACAAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TT------A-------------------------------------------------------ATTATATTT----ATAGACAAAATGC-ACTTTTGCTTGC--TTG----------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GAA------GC-TTCCAATTGAAAATTGAA--AAGAGAACGCA-ATGTTG-----CACCTAATGGTCATA---GTTC-TCCTTCACCTTGGGG----CAA--------TATAATTAA---TCAAA-------TCATGCAGCGCCAAGGAAAACA--------TGCGATTCA-AG------TAAAAAATCGCCTTTGATTTT-------------------CAGCCT-----TAATCTGTATTTTATC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTAATATAGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TT------ATTTAT------------------------------------------------------TCTTTAAACATTGTATAAATAT-TATTTTAC-T--TTTTG----------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................AAC---TAGCAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTGATTTT-------------------CAGCCT-----T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200002000000000000
..CA--------------------GAA--AATAT----------------------------------A----TAT-------AC--AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200000000002000000
.........................................................................TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000001100000000
.........................AA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCCAAGGAAAACA--------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.......................................................................................ACAAC---TAGCAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................TAGCAAGA--AGCGATTGAGAG-AA-AATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...........................................................................T-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
...............................................................................................TAGCAAGA--AGCGATTGAGAG-AA-AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
................................................................................................AGCAAGA--AGCGATTGAGAG-AA-AATCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..........................................................................AT-------AC--ACAAC---TAGCAAGA--AGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.........................................................................TAT-------AC--ACAAC---TAGCAAGA--AGCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
droSec2
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-T-AGAGGAGAACT-----TTCATTTTCTT---TAA------GC-TTCCAATTGAAAATTGAA--AAGAGAACGCA-ATGTTG-----CACCTAATGGTCATA---GTTC-TCCTTCACCTTGGGG----CAA--------TATAATTAA---TCAAA-------TCATGCAGCGCCAAGGAAAACA--------TGCGATTCA-AG------TAAAAAATCGCATTTGATTTT-------------------CAGCCAA-GCACAATCGGTATTTTATC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTAATATAGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TT------ATATAT------------------------------------------------------TCTTTAAACATTGTATAAATAT-TATTTTAC-T--TTTTG----------------------------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................T----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
dm3
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GGG------AC-TACCAATTGAAAATGGAA--AAGAGAATGCA-ATGTTAATGGTCACTTAATGGTCATA---GTTCCTCCTTCACCTTGGTG----CAA--------TATAATTAA---TCAAA-------TCATACAGCGCCAAGGAAAACA--------TGCGATTCA-AG------TAAAAAATCGCCTTTGATTTT-------------------CAGCCAA-GCACAATCGATATTTTATC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTACTATAAATTACTTAACAGA-A--TTTATTGATTCAT--------------------------------------------------------------------------------------------------------------------------------ATTT---------------TT------ATTTAT----------------------T------TTTAAATGTAA-TGAACTTTAGTTA----TAAATATAGTAGAAATGT-TATTTTAC-T--TTGTG----------------------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................T-------AC--ACAAC---TAGCAAGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TAT-------AC--ACAAC---TAGCAAGA--AGCGATTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................C--ACAAC---TAGCAAGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAGCAAGA--AGCGATTGAGAG-AA-AAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
..........................................................................................AC---TAGCAAGA--AGCGATTGAGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000010000000000000000
....................................................................................................AGA--AGCGATTGAGAG-AA-AAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAGCAAGA--AGCGATTGAGAG-AA-AAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AC--ACAAC---TAGCAAGA--AGCGATTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................C---TAGCAAGA--AGCGATTGAGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................AC---TAGCAAGA--AGCGATTGAGAG-AA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
.......................................................................................ACAAC---TAGCAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................T----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................AC--ACAAC---TAGCAAGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................C---TAGCAAGA--AGCGATTGAGAG-AA-AATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................A--AGCGATTGAGAG-AA-AATCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AAC---TAGCAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCATACAGCGCCAAGGAAAACA--------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................TAT-------AC--ACAAC---TAGCAAGA--AGCGATTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GATTTG-ATT-GTTGTTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AGCGATTGAGAG-AA-AATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TAGCAAGA--AGCGATTGAGAG-AA-AATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AAC---TAGCAAGA--AGCGATTGAGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................ATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACTATAAATTACTTAAC................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AC--ACAAC---TAGCAAGA--AGCGATTGAGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................AGCGATTGAGAG-AA-AATCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TTTATTG--CCTGCGTC---GCGCCTCTGCATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................A----TAT-------AC--ACAAC---TAGCAAGA--AGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................GCCTCTGCATTTGCGCTAAAC-------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GGG------AC-TACCAATTGAACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................C---TAGCAAGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................TAT-------AC--ACAAC---TAGCAAGA--AGCGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................TAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................A--AGCGATTGAGAG-AA-AATCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................CAAGA--AGCGATTGAGAG-AA-AATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................ACAAC---TAGCAAGA--AGCGATTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTACTATAAATTACTTAACA...............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AATGGAA--AAGAGAATGCA-ATGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CAAC---TAGCAAGA--AGCGATTGAGAG-AA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------TATCCTACTATAAATTACTTAACA...............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................GCAAGA--AGCGATTGAGAG-AA-A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AT-------AC--ACAAC---TAGCAAGA--AGCGATTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGTCACTTAATGGTCATA---GTTCCTCCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CTTGAG---ATTTATTG--CCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATAT----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AAGA--AGCGATTGAGAG-AA-AATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................AGCAAGA--AGCGATTGAGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................TATTG--CCTGCGTC---GCGCCTCTGCATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCAAGA--AGCGATTGAGAG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................C--ACAAC---TAGCAAGA--AGCGATTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................TTG--CCTGCGTC---GCGCCTCTGCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCAAGA--AGCGATTGAGAG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................T----------------------------------A----TAT-------AC--ACAAC---TAGCAAGA--AGCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ACAAC---TAGCAAGA--AGCGATTGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AGA--AGCGATTGAGAG-AA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................C---TAGCAAGA--AGCGATTGAGAG-AA-AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--------------------------------------------------------------------------------------------------------------------------------ATTT---------------TT------ATTTAT----------------------T------TTTAAAG.......................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droEre2
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTCGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GGG------AC-TTCCAATTGA-------A--AAGCGAATGCG-ATGTTG-----CACTAAATGGTTATAGTAGTTC-TCCTTCACCTTGGGC----CAA--------TATAATTAACGT------------TCATTCAGCGCCAAGAAAAACA--------TGCGATTCA-AC------TAAAATATCGCCTTTGATTTT-------------------CAGCCAA-GCACAATCGGTATTTTATT--TAACTTTTCCAAATC----TGCAAAAATAGTAC--GAACC-------------------------------AAGAACCACA---------------------------------------------------------------ATCCTACTATATATTTCTTTACAGA-A--TTTATTGATTTATA-----------------------------------------------------------------------------------------------------------------------------ATATTT---------------TT------ATTAA-----------------------T------TTCAAATGTAG-CGAAC----------------------ACAAATG-----TTTAC-T--TTTTGTGTTGTACAAAAACTGAAGAATATTTGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................TAGCAAGA--AGCGATTGAGAG-AA-AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
...........................................................................T-------AC--ACACC---TAGCAAGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................................................................TAT-------AC--ACACC---TAGCAAGA--AGCGATTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.............................AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAAGA--AG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
droYak3
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAGGA--AGCGATTGAGAG-AA-AATCGATTTG-AAT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAAC-------CAATTAATA-C-AGAGGAGAACT-----TTCATTTTCTT---GGG------GC-TTCCAATTGA-------A--AAGCGAATGCA-ATGTTG-----CACTAAATGGTTATA---GTTC-TTCCTCACCTTGGTG----CAA--------TATAATTAACGA------------TCATTCAGCGCCAAGGAAAACA--------TGCGATTCA-AA------TAAAAAATCGCCTTTGATTTT-------------------CAGCCAA-GCACAATCGGTATTTTATC--TAACTTTTCCGA---------------CAGTATAACAACC-------------------------------AAGAACTACA---------------------------------------------------------------ATCCTTCTATTAAATTATTTACAGA-C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAAAATTTAAAAAAATTC-TATA-TAA-T--TTGTG----------------------------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................T-------AC--ACACC---TAGCAGGA--AGCGATTGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.................................T----------------------------------A----TAT-------AC--ACACC---TAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEug1
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACAGC---TAGCAAGA--AGCGATTGAGAA-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGA-------CAATTAACA-A-AGAGGA-AACT-----TTCCATTTCGT---CGG------TT-TTCCAATTGA-------A--AAGTCATTGT---TGTTG-----CATTGTTTGGTTATA---GTTT-TCCTTTACCTGGGGG----CAA--------TTTAATCACCGA------------TCATTTCCAGCCAAGAACAAC---------------------------TTTAAAATCGCATTTGAT-------------------------------------CGGAATTTAAAA--TAACTTTACTAA---------------A--------------------------------------GATAT-----------------------------------------------AGAAAATGCTTTGGTAACGATTGAA--------------------------AATACA----------------------------------------------------------------------------------------TTTTGATTTTA---------------GTCTTTTCCAAAGTCT---TCTAATTTTT---------------TT------TGTAA-----------------------T------TTC----GTTA-CC-------AA----------------------------------CAA--TTA----------------------------ASizeHit CountTotal NormTotal
No Reads
droBia1
CCCA--------------------GAA--AATAT----------------------------------A----TATA------AC--ACACC---TAGCAAGA--AGCGATTGGAAG-AA-AATCGATTCG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGT-------CAATTAACGAA-AGAGGAAAACT-----TTC-----CCT---CGG------GT-TTCCAATTAA-------A--AAGCGATTGCA-ATGTAG-----CAATAAAT-------------------TCGCCCCAAGGTGAACTA--------TGTAAACATCGA------------TCATCCCGAGCCAAGAACATCA--------AGAGATGCA-AA------TGAAAGA----------------------------------------------------------------------------------------------------------------------------------CAT-----------------------------------------------GGAATATGTATCTGAAGCATTTGAA--------------------------A----------------------------------------------------------------------------------------------------------TCCCA------------------AA--CT---TGCGGTT--T---------------TT------CC------------------------------------------------------AACTTATTTTAATAT----TAAGTTGGTGTTTTAT-TGG--CTG----------------------------ASizeHit CountTotal NormTotal
No Reads
droTak1
CCCA--------------------GAA--AATAT----------------------------------A----TAT-------AC--ACACC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGT-------CAATTAATA-A-AGTGGAAAACT-----TTCCTTCTCTG---CGG------GT-TTCCAATTAA-------A--AAGCGATTGCAAATGTTG-----CAATGAATGGTTATA---GATT-TCTTTCACCTTGGGG----CCAT-------TTTTATCATCTA------------TCATCCCGAGCCAAGAACACCA--------TGCGATGAA-AG------CTCAAA------------------------------------------------TTGGTATTTTATT--CAAGTTTTAAAAAA------------------------------------------------------CA---------------------------------------------ATCGGAAAATGTATTTTAAACTATTGAA--------------------------A----------------------------------------------------------------------------------------------------------ACCTACAACTTTTGTCTTACTTACAGCGCAGTTGAA--ATTTTTATTTAATTATTATTTAG--------------------------------TAAAAGGTAATAATGGAA-TGTATATTAGTT-------------------------------A-T--TTTCA----------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
CCCA--------------------GAA--AATAT----------------------------------A----T---------AC--ACACC---TAGCAAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTAAG---ATTTATTG--CCTGCGTC---GCGACTCTGCATTTGCGCTAAGC-------CAATTAATA-A-AGAGGAAAAGT-----TTCCTTTTCTA---TGG------TC-TTGCAATTGA-------A--GAGCGATTGCA-ATATTG-----CAATAAATGCTTTTA---GTTT-TCCTTCACCTCGGGG----ACA--------TTTAATCATCGA------------TCAGTGCGAG-------------------------------C------TTAAAAATCGCCTTTGACTTT-------------------CAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCCA--------------------GAA--AATAT----------------------------------A----T---------AC--ACACC---TAGCGAGA--AGCGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTAAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGC-------C-------------------------------TTTTCTT---CGG------TC-TTGCAATTGA-------A--AAGCGATTGCA-ATATTG-----CAATAAATGGTTATT---ATTT-TCCTTAACCTCGGGG----CAC--------TTCAATCATCGA------------TCATTCCGTGCCAAGAAAAACA--------TACGGTGCGAAT------TAAAAAATCGCCTTTGATTTT-------------------CAACGGA-GCAGATTTGATACCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTAATTT------TGTTGAAACATTTTTCTAAGACACATACAAAATATTAAAGGTAATA--------------------------------------------------T-T--TCTAA----------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CCCA--------------------TAA--AATAT----------------------------------A----TAT-------AC--ACATC---TAGCAAGA--AGAGATTGAGAG-AA-AATCGATTTG-ATT-GTTGTTTTTACTTGAG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGT-------CAATTAACG-A-AGAGCTGAACT-----TTCCTTTTCTT-----------------GCAATTGA-------A--AAGCGA-TGCA-GTATTG-----CATTGCGCGGTTATA---GTTT-TCCTTCACCATGGGG----CAA--------TTTTATCATTGA------------TTT----AAGCCAG---ACAGA--------TGCGA-----AC------TAAAAAATCGCCTTTGAATTT-------------------CAGCAAAAATGGATTCGGAATTTTATATTTAA-TTTTCCAAAACGTTTTGCT-------------------------------------TAGAAT-----------TGTAG---------------AAAAATTCTAAATAGAAAATTGGAAAATTCT--GGGA------------------------------------A--TGTATTGATTTTTAGTTTTTGTAAAATTAAATTATAAACTTGTTTCTAGCGACAAATTCCATTTAGTGCTAGTATTTCCTTGGGGAAACATTTTGGTTTTAAAACCTTTACCTT------------------------------T-------------------------------------------------------------------------------------------------------------------TTA--TTG----------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
CCCA--------------------GAA--AATAT----------------------------------A----TAC-------AA--A---------AAAAAA--CTAGATTGAGAG-AA-AATCGAATCG-A-------------TTTGAGATTTTTTATTG--CCTGCGTCGTCGTGCCTCTGCATTTGCGCTCAGTTCAAGTTCAATTAATTAATGGAGAAAAACGCACGCTCCCTTCTCCT---GGGGTTAGGTT-TTCAAATTCA-------AAGAAGCAATTGCC-ATATTG-----CAATGATTGGTAATA---ACTCTTTCCTCACCTTGTGA----TTGGTTGGTTATA------C---GCAAGCCGTGGAGTAGTCAGAGCCAAGGATTACAGGGAATAATGCAGTGCATACTTTATTAAAAAAATCGCCTTTGTTTTT-------------------AAGCTT-----------------------------TTTTAA---------------CAATGT-----CAATAAACTTTACTGCATTATTTAAAATGAAATGAAAATTGCATGGTAATTAGTGAAGT----------------------------------------------TTTTAA--------------------AATATA----------------------------------------------------------------------------------------AATTAATATTA---------------TTTTATTT----------------------------------------------------------------------------------AAACGTAGGTTAT------------------------TATATAT-GACA---A-T--CTTTT----------------------------ASizeHit CountTotal NormTotal
No Reads
droAna3
GCCA--------------------GAA--AATAT----------------------------------A----TAT-------ACACACACCT--TAGCATGAAAAGCGATTGAAAG-AA-AATCGATTCCTGTT-CTTTTTCTTACTTGTG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGC-------TAAT-ATCG----AAGGATACCA-----TTAGTTATCCT---TGT------GCAT--------------------AGCAATT---------G-----CAATGATTGGCAACC---ATTT-CC--CAACCTCCTTC----TGT--------TTCAATCATCGT------------TGTCTCCGAGTCATG------------------------------------AAAATCGCCTTTGATTTTTTTAAAAAAGAGGGTAATCCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TCTG--------------------AAA--AATAT----------------------------------A----T---------AC--ACACCT--TAGCGTCG--TGCGATTGAAAG-AA-AATCGATTCG-------TGTTCTGACTTGTG---ATTTATTG--CCTGCGTC---GCGCCTCTGCATTTGCGCTAAGC-------TAAT-ATCG----AAGGAAAACT-----CACCTAGTTTTCCTTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dp5
CACACACACACACACACACACACAGAA--AATAT----------------------------------A----TATA-----TAT--ATACA---TAGCGGAA--AGCGATTGAGAACAA-AATCGATTGGAAAT-GTTGTTTCTTCTTGAG---ATTTATTG--CCTGCCATTGGGCGCCTCTGCATTTGCGCTAAGC-------CA-TTAATA-A-TGGGACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................T----------------------------------A----TATA-----TAT--ATACA---TAGCGGAA--AGCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.........................AA--AATAT----------------------------------A----TATA-----TAT--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.0510000000100
droPer2
CACA--------------------GAA--AATAT----------------------------------A----TAT-------AT--ATACA---TAGCGGAA--AGCGATTGAGAACAA-AATCGATTGGAAAT-GTTGTTTCTTCTTGAG---ATTTATTG--CCTGCCATTGGGCGCCTCTGCATTTGCGCTAAGC-------CA-TTAATA-A-TGGGACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CACAC-CACACAAACAAAAAC-CATAATAGATATGTATATATGTATGTATATTAATATATATATATATAAATACAT-ACATGCAT--ATATA---AAGCAGAA--AACAATTGAGAACAAAAAGTTGTTAA-AATTTTGTTTATTATTCTAA---ATGAATTG--CCTGCTTTACGCCGCCTCTGCATTTGTGCTCGGT-------CATTATGTA-T-GTGGGTGGG------------------------------------------------GAG--GGGAGAGTGGG-ATTTTT-----ATGTTAATGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------A-AGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAAA---------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................ATTTGTGCTCGGT-------CATTATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........CACAAACAAAAAC-CATAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17100010
droVir3
AACAAATAT-----------------A--CATAT------------------------------ATCTA----TAT-------AC--ATACA---TAGCAAAAA-AAAAAACAACAA-AA-AAAAGGTTTA-T----TTATTTTGAATGAGT---ATTTATTGAGCCTGTTCTCGCGTAACCCTGCATTTGTGCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AATT--------------------AAA--AAACT------------------------------------------------------------------------------------------TGAATTA-ACA-GTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----TACTA--TTTTTTATA--T----------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAAAC--------------------TATATT------------------------------------------------------------------------------------------------------------------------------------------T---------------AT------CTTTCT------------------------------------------------------TTTTTATAATTTATATAAATAT-GTTA---T-TAT--TTT----------------------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTTCATCTTGAGG-----------TAA--AATAG----------------------------------T----T---------GC--AGCATTAACAAAGAAA--ACCTGTTGGAAT-AA-CATGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGAATTTACTCCG-------------------CAGTCA-----TGATTAATATTGTCTA--T----------------------------------------------------------------------------------------------------------------------------------------------TGTTATACTACAAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TT------A-------------------------------------------------------ATTATATTT----ATAGACAAAATGC-ACTTTTGCTTGC--TTG----------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:13 PM