ID:

dsi_18509

 Coordinate:

x:3538957-3539026 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.6 -9.6 -9.2 -9.1

Flybase annnotation

five_prime_UTR [x_3539027_3539200_+]; exon [x_3539027_3539264_+]; five_prime_UTR [x_3538565_3538956_+]; exon [x_3538565_3538956_+]; intron [x_3538957_3539026_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------##################################################
CATAAAAACAGCAGCAGTTTTCTTAATATATTGGGCTAAAAAACGCAAACGTAAGCGAAAAATTTGAAATCCCTCTTATAATTTACTTGTGTGCCTGTGTCTCGTATCTATGCGTGACAGCAAACAGCGAGCAAGAACAACAAATAGCTGGGCAAAAACAGGACGCACAA
**************************************************...................................((...........(((.((((....)))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
................................................................................ATTTACTTGTGTGCCTGTGTCTC................................................................... 23 0 1 7.00 7 0 5 2 0 0 0 0 0 0 0 0
..................................................................................TTACTTGTGTGCCTGTGTCTC................................................................... 21 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AACAACAAATAGCTGGGC................. 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
................GTTTTCTTAATATATTGGGCT..................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
...................................................................................TACTTGTGTGCCTGTGTCTC................................................................... 20 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.............................................................................ATAATTTACTTGTGTGCCTGTGTCTC................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CTATGCGTGACAGCAAACAGCGAGC...................................... 25 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
...........CAGCAGTTTTCTTAATATATTGGGC...................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................TTTCTTAATATATTGGGC...................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................TGTGTGCCTGTGTCTCGTATC.............................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................ATCTATGCGTGACAGCAAACAG........................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
................GTTTTCTTAATATATTGGGC...................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................TGCCTGTGTCTCGTATCTATG.......................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................GTTTTCTTAATATATTGGGCC..................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AAATAGCTGGGCAAAAACAGGACGCA... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................ATATGTTGGGCTAAAAAA............................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............AGTTTTCTTAATATATTGGGCC..................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCGAGCAAGAACAAC............................. 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................AATATATTGGGCTAAAAAACGC............................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................ATATTGGGCTAAAAAACGC............................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................TTTCTTAATATATTGGGCC..................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................GTATCTATGCGTGACAGCAAACAGCGAGC...................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................GTGCCTGTGTCTCGTATCTATGCGTGA..................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................TGGGCTAAAAAACGCAAACGTAAGCGA................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................AATACCTGGGCAAAAACAGGACGCAC.. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................CTCGTATCTATGCGTGACAGC................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCGAGCAAGAACAACAAATAGCTG.................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................GGGCAAAAACAGGACGCA... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GCAAGAACAACAAATAGCTGGGCAAAAA............ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................TATTGGGCTAAAAAACGCAAACGTAAGC.................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................AAACGTAAGCGAAAAA............................................................................................................ 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................AAGAACAACAAATAGCTGGAC................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................AATTTACTTGTGTGCCTGTGTCTC................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................TATAATTTACTTGTGTGCCTGTGTCTC................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................GAGCAAGAACAACAAATAGCG..................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TAATTTACTTGTGTGCCTGTGTCTC................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............AGCAGTTTTCTTAATATATTGGGC...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCGAGCAAGAACAACAAATAGCTGG................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................AATATGTTGGGCTAAAAAAA.............................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
.......................GAATATGTTGGGCTAAAAAA............................................................................................................................... 20 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................GCTCTGTCTCGCATCTATGCGTG...................................................... 23 3 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
.......................GAATATGTTGGGCTAAAAAAA.............................................................................................................................. 21 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0
........................AATATATTGCGCTGAAAA................................................................................................................................ 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
..........................TATGTTGGGCTAAAAAAA.............................................................................................................................. 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTATTTTTGTCGTCGTCAAAAGAATTATATAACCCGATTTTTTGCGTTTGCATTCGCTTTTTAAACTTTAGGGAGAATATTAAATGAACACACGGACACAGAGCATAGATACGCACTGTCGTTTGTCGCTCGTTCTTGTTGTTTATCGACCCGTTTTTGTCCTGCGTGTT
**************************************************...................................((...........(((.((((....)))).)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 GSM343915
embryo
......................................................................................................................................................CCGTTTTTGTGCTGCGTGTT 20 1 1 1.00 1 0 0 0 1 0 0 0
......TTGTCGTCGTCAAAAGA................................................................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................CACGGACACAGAGCATAGATA........................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
.....................................................................AGGGAGAATATTAAATGAACA................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0
......ATGTCGTTGTCAAAAGAAGTAT.............................................................................................................................................. 22 3 3 0.67 2 2 0 0 0 0 0 0
.......TGTCGTTGTCAAAAGAAGTAT.............................................................................................................................................. 21 2 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................CACGGCCACAGAGAATAG.............................................................. 18 2 3 0.33 1 0 1 0 0 0 0 0
.......TGTCGTTGTCAAAAGAAGTAAAT............................................................................................................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................TTTGTCGATCGTCCTTGTGGT............................ 21 3 7 0.29 2 0 0 0 0 0 2 0
.........................................................TTTTTTAATTTTAGGGACAATA........................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 1
...........................................................................................................................TGTCGCTCGTGCTTGT............................... 16 1 7 0.14 1 1 0 0 0 0 0 0
.......................................................................................ACATACGGCCACAGAGAATA............................................................... 20 3 8 0.13 1 0 1 0 0 0 0 0
.......................................................................................ACATACGGCCACAGAGAAT................................................................ 19 3 17 0.12 2 0 2 0 0 0 0 0
..........................................................................................TACGGCCACAGAGAATAGA............................................................. 19 3 16 0.06 1 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:3538907-3539076 + dsi_18509 CATA--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTA---AT------------------------ATATTGGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-TT------GAAATCCCTCTTAT----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGCAAG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACAA----
droSec2 scaffold_4:2874120-2874289 - CATA--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTA---AT------------------------ATATTGGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-TT------GAAATCCCTCTTTT----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGCAAG---------------AACAACA-AATAGCTGGTC-AAA-------------------------------------AACAGGA-------CGCACAA----
dm3 chrX:3843356-3843563 + CATA--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTG---AT------------------------ATATTTGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-TT------GAAATCCCTCTTTT----AA---T------TTA--------------------------------------------GTTG----------TG--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------GCGTC------TGCA----TTTTAATATAATTTTGTGTGCATTTTCTTAACAG-------------------------------------------CAAACAGCC--AGCAAG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACAA----
droEre2 scaffold_4690:1218718-1218928 + CAGA--AAAA----------------------------C-AGCAGCAGT----------------TTTTTTG---AA------------------------ATATTGGTAA------A----------------------------------------AAAAACGCAAACGTAGGCAA-AAAA----------------A-TT------AAAATCCCTATTTT----AT---T------GTA--------------------------------------------CTTGTGTGTGCTTGTG--TGCCTGTG-----T-------CTGGTATC-----TCTGCGT------GCGTG------AAAA----TTCTAATACAATTTGGTGTGCATTTTCTTGACAG-------------------------------------------CTA---------CCAGG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACAA----
droYak3 X:4579380-4579582 - CAGA--AAAA----------------------------C-AGGAGCAGT----------------TTTGTTG---AA------------------------ATATTGGTAT------A----------------------------------------AAAAACGCAAACGTAAGCAA-AAAA----------------A-AT------TAAATCCCCCGTTT----AT---T------GTA--------------------------------------------CTTG----------TGTGTGCCTGTG-----T-------CTTATATC-----TCTGCGT------GCGTG------TGAA----TTCTAATACAATTTCGTGTGAATTTTCTTGACAG-------------------------------------------CAA---------ACAGG---------------AACAACA-AATAGCTAGGC-AAA-------------------------------------AACAGGA-------CGCACAA----
droEug1 scf7180000409553:90423-90644 + CAGA--AAAA----------------------------C-AG---CAGT----------------TTCGTTG---AA------------------------ATATTGGGC------------------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-TA------AAAATCCCTTTTAT----AT---T------GTACAACTGTG--------------------------------TGT----------GAGTGTG--TGTCTGTG-----T-------TTCGCATCGTCTCTCTGTATGAGTGTTTTTG------TGCA----TTTTAATACAATTTCGTGTGCATTTCCTTAACAG-------------------------------------------CAA---------CCAAGA----AC--------AACAACA-AATAACTGGGT-AAA-------------------------------------AACAGGA-------CGCACAA----
droBia1 scf7180000302421:2626811-2627072 + A--------A----------------------------C-AGCAGCACT----------------TTCGTTG---AA------------------------ATATTGGGC-------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-CA--AGAGCAAGTCCCTGTTTT-----T---TACACCAGTACAACTGTGTTTTTGTGCGTTGCGTATGTGGGTGGGCGGTGTGTGT------------GTG--TGTCTGTGTGCGTTCGCTTGTCCCATCTC-----CTTGT------GTTTGTG------TGCA----TTTTTATAAAATTTCGTGTGCATTTCCCTAACAG-------------------------------------------CAA---------GCAAG---------------AACAACAAAATAGCTGGGC-GAA-------------------------------------AACAGGA-------CGCACAACCGA
droTak1 scf7180000414393:239147-239379 + AGGCGAAAAA----------------------------C-AGCAGCAGT----------------TTCGTTG---AA------------------------ATATTGGGC-------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-ATAAAAACCAAATCCCTCTTTT----ATGCTTATA-CAGTAGA--TGTGTG----------------------------------CTTGTGCGT----GTGTGTGTGTGTG-----T-------CTCGTCCC-----TCTGT------GTTTGCG------TGCA----TTTTAATACAATTTCGTGTGCATTTCCTTAACAG-------------------------------------------CCA---------ACGAG---------------AACAACAGAAAAGCTGGGC-GAA-------------------------------------AACAGGA-------CGCACAA----
droEle1 scf7180000491006:2687826-2687982 + AA-----AAA----------------------------C-AGCG--AAT----------------TTCGTTG---AA------------------------ATATTGGGC-------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A--------------CCCTCTTTG----AT---T--------------------------------------------------------G----------------------------------------------------------------TG------TGCAAGTTTTTTAACACAATTTCGTGTGCATTTCCTCAACAG-------------------------------------------CAA---------A-AAC---------------AACAACA-AATAGCTAAGCGAAA-------------------------------------AACAGGA-------CGCACAA----
droRho1 scf7180000779334:881666-881827 - TGAA--AAAA----------------------------C-AGCG--AAT----------------TTCGTTC---AA------------------------ATATTGGGCT-----------------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-------------TCACTCTTAT----AT---A------------------------------------------------GTGT--------------------------------------------------------------------GTG------AGTT----TTTTAATAAAATTCCGTGTGCATTTCCCTAACAG-------------------------------------------CAA---------ACAAA---------------AACAACA-AAAAGCTAAGCGAAA-------------------------------------AACAGGA-------CGCACAA----
droFic1 scf7180000453901:623607-623785 - AA-----AAA----------------------------C-AGCAGCAGT----------------TTCGTTG---AA------------------------ACATTGGGC------------------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-------------CCACTCT--T----AT---T------TTA--------------------------------------------CATG----------TG----TTTGTG-----T-------TTC--------------------------AGTGTATGTGCC----TTATAATACAATTTCGCGTGCATTTCCCTAACAG-------------------------------------------CAA---------CCAACA----TC--------AACAACA-AATA-TTGGCC-AAA-------------------------------------AGCAGGA-------CGCACAA----
droKik1 scf7180000302544:630707-630830 - CAAA--ATTTG------------CTTCAGAAATAAAAAC-AACAGCAGG--------CATTTAGTTCTGTTCGGAGA------------------------GTATTGGCGA------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-CA------AGCATCCGTGT---------------------------------------------------------------------------------------------------------CTCACCTC-----TCTCCCT------GTCTC------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:4145908-4146066 + TTTT--CAAATGTATCTGCTTTGCTT-ACACAAACAAAC-ACCAACAAA--------CATATG------------------------------C--ATATT---------------------------------------------------------ACTATAGCTTTTTTAGTTTA-TTGT----------------T------------------TTTGC----AA----------TT-----------------------------------------------------------------ACTTTG-----G-------CTGATTT-------------------------------------------------------------GTTTTTGTAAA-------------------------------------------AAA---------AAAAA---------------TACAAAA-AAAACTAAAGC-AGA-------------------------------------AGAAGCA-------AGTCAAG----
droBip1 scf7180000391693:32749-32979 + CGTAAAAAAA----------------------------A-GGCAGCAAATAGCCCAGCAATAAGTTCAGTTC---AG------------------------A---------------AAGAAAAAAGCGAAAGCGAAAGCACGAAAACTGAATAACGCAAAAGCAGAAACGTAAGCGA-AAAA----------------T-CA------AGCTGCCCTG----------------------------------------------------------CCGTGTGTACATA----------TG--TGTG---------------------------------------------------------------TGTAATTCAATTCCGTGTGCATTTCCTCAACAGCGCCACCGTCACAACATAGCACCAACAA----------------CA---------ACAAG-AAC-----------AACAA-------------C-AAA-------------------------------------AACA-------------ACAG----
dp5 XL_group1e:11843432-11843669 - TATCTTAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------ATATTTGCAGACCGGAAAGAAA----CGCAAG---AAGAACGAA---------------------AACCGTAAGCGA-AAAT----------------C-AG------CAAAT------------------T------TTA--------------CGTGCTGCGTGTCTC----TGCTGAGTGTAT------------GCG--TGTTTGTG----------------------------TGT------GTTTGAGTGAATG---------TGTAATACAATTCCGTGTGCATTTCCTTAACAG-------------------------------------------CCA---------CCAC---------------------------------------TACAACTACAACGACAACAAGGTGAAGGCAAA-----ACCAGGACAAGCAGCGCGCAA----
droPer2 scaffold_14:1771037-1771264 + TATCTTAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------ATATTTGCAGACCGGAAAGAAA----CGCAAG---AAGAACGAA---------------------AACCGTAAGCGA-AAAT----------------C-AG------CAAAT------------------T------TTA--------------CGTGCTGCGTGTCTC----TGCTGAGTGT-----------------------------------------------A-----TGTGT------GTTTGAGTGAATG---------TGTAATACAATTCCGTGTGCATTTCCTTAACAG-------------------------------------------CCA---------CCAC---------------------------------------TACAACTACAACGACAACAAGGTGAAGGCAAA-----ACCAGGACAAGCAGCGCGCAA----
droWil2 scf2_1100000004511:3167431-3167622 + AATG--TTGA----------------------------T-AGAAGCATT----------------GT-CTTG---GT------------------------ATGGTTAACT---G--T----------------------------------------TAAGATATAGAT-TGGGCTATGAAA----------------T-TT------AATATTTCTCACTCTCTTACTCACAT----TTT------------------C-------------------------TCCT----------TG--TCTCTTTT-----T-------CTCTCTT-------------------------------CCA----TTTTTA-------------------------CTA--------------CAGATTATTGGCCT----------------CA---------ACATG-ATTTCCAGCAAGGAAACGACA-AAGAAT------GTG-------------------------------------GGCAA---------GGCGCAA----
droVir3 scaffold_12963:1479904-1480095 - AACA--ACAA----------------------------CAAGCAGCGGT---------TGTCAGTTTCAATT---AA----------------AAT-----CAATTGAGCT------C----------------------------------------AAT--------------------TATTTGATACGCAGATGAAATA------AAAAACCC------------------------G--------------CGCGCCACAAGTTTC----TGTTT-----------------------------------------------------------------------TCATA------C----------------GACGTT------------TGTGTGC----------------------------GTGTGTGTGTGTGGGTTT----GGCTGGTATG-TGGC------------CCTCG-----------------------AAAATGTTAAGAATATGGG-----------GGCGTGG-------CTAGCAA----
droMoj3 scaffold_6680:21869619-21869768 + CAAG--AAAAAG---------------------AAGAAC-ACCAGCA---------------------------------------------------------------G------C----------------------------------------AAAAACAACAACACAAACAA-CAAC----------------T--T------GAAGTCACA-----------------------------------------------------------------------G----------TC--GGCCCACG-----C-------CTCAT-TC-----TGGGCGC------------------------------------------------------AGAAG-------------------------------------------CTG----CCTTGACATG-GGCAATAAA-----GAGAATT---------------------------------------TAAAGCGCC-----ATAGAAGCTGACGACGCAAGC----
droGri2 scaffold_15203:11915625-11915790 - AATA--AACAG---------------------------C-AGCAGCAGC----------------AGCAGC-----CACAGCAGCAGCAACAGCAGCCATT---------------------------------------------------------AAAATTGCCAACATGATTGA-CGCC----------------A------------------CCTGC----AA----------TTA--------------------------------------------TTT------------------------------------------------------------------------------------------GAATCCCTATGCACTGTCTCAGCCA-------------------------------------------ACA---------GCAA---------------------------------------TACAGCAGCAGCAACAGCAGC-------AGCAGCAACAACAACA-----ACAACATCA----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATA--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTA---AT------------------------ATATTGGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-TT------GAAATCCCTCTTAT----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGCAAG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................A---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2317.00705020000000000000
...............................................................................................................................................................................................................................................TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2114.00402200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA-AATAGCTGGGC-.................................................................1814.00400400000000000000
...............................................GT----------------TTTCTTA---AT------------------------ATATTGGGCT------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300300000000000000
................................................................................................................................................................................................................................................TA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2013.00302100000000000000
.............................................................................................................................................................................................................................AT----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2612.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................C-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGC.......................................................................................................2512.00200000020000000000
..........................................CAGCAGT----------------TTTCTTA---AT------------------------ATATTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
.................................................................TTTCTTA---AT------------------------ATATTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................................................................................................................................................................................................................................................................................TG----------TG--TGCCTGTG-----T-------CTCGTATC-----..................................................................................................................................................................................................................................2111.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................ATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAG..............................................................................................................2211.00100000000000100000
...............................................GT----------------TTTCTTA---AT------------------------ATATTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
................................................................................................................................................................................................................................................................................................................TGCCTGTG-----T-------CTCGTATC-----TATG..............................................................................................................................................................................................................................2111.00100000001000000000
...............................................GT----------------TTTCTTA---AT------------------------ATATTGGGCC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCA.......2611.00100010000000000000
..............................................AGT----------------TTTCTTA---AT------------------------ATATTGGGCC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG--AGCAAG---------------AACAAC...............................................................................1611.00100000001000000000
.......................................................................A---AT------------------------ATATTGGGCT------A----------------------------------------AAAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.....................................................................................................ATATTGGGCT------A----------------------------------------AAAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................TTTCTTA---AT------------------------ATATTGGGCC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................GTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGC.......................................................................................................2911.00100010000000000000
.............................................................................................................................................................................................................................................................................................................G--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------GA...................................................................................................................................................................2711.00101000000000000000
.........................................................................................................TGGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-.................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................CTCGTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------C....................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG--AGCAAG---------------AACAACA-AATAGCTG.....................................................................2511.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGC-AAA-------------------------------------AACAGGA-------CGCA.......1811.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AA.......................2811.00100010000000000000
......................................................................................................TATTGGGCT------A----------------------------------------AAAAACGCAAACGTAAGC....................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
......................................................................................................................................................................AAACGTAAGCGA-AAAA----------------.............................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
...................................................................................................................................................................................................................................AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2411.00101000000000000000
............................................................................................................................................................................................................................TAT----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2711.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--AGCAAG---------------AACAACA-AATAGCG......................................................................2111.00101000000000000000
..............................................................................................................................................................................................................................T----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTC............................................................................................................................................................................................................................................2511.00101000000000000000
...........................................AGCAGT----------------TTTCTTA---AT------------------------ATATTGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--AGCAAG---------------AACAACA-AATAGCTGG....................................................................2511.00100010000000000000
droSec2
CATA--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTA---AT------------------------ATATTGGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-TT------GAAATCCCTCTTTT----AA---T------TTA--------------------------------------------CTTG----------TG--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGCAAG---------------AACAACA-AATAGCTGGTC-AAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------CAAACAGCG--AGCAAG---------------AACA.................................................................................2112.0020020
....................................................................................................................................................................................................................................................................................................................TGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------GA...................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCG--AGCAAG---------------AACAACA-.............................................................................2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................ACAG-------------------------------------------CAAACAGCG--AGCAA.....................................................................................................1811.0011000
.......................................................................................................................................................................................................................................................................................................................................................GT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--AGC.......................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................ATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGC.............................................................................................................2311.0010010
.............................................................................................................................................................................................................................................................................................................G--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------------------------------------------------------.....................................................................................................................................................................2511.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................CAG-------------------------------------------CAAACAGCG--AGCAAG---------------AAC..................................................................................2111.0010010
.........................................................................................................................................................................................................TT------GAAATCCCTCTTTT----AA---T------.....................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------CAAACAGCG--AGCAAG---------------AA...................................................................................1911.0010010
.ATA--AAAA----------------------------C-AGCAGCAGT----------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................................................................................................................................................................................................................GTATC-----TATGCGT------------------------------------------------------GACAG-------------------------------------------CAAACAGCG--A.........................................................................................................2711.0010010
dm3
CATA--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTG---AT------------------------ATATTTGGCT------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-TT------GAAATCCCTCTTTT----AA---T------TTA--------------------------------------------GTTG----------TG--TGCCTGTG-----T-------CTCGTATC-----TATGCGT------GCGTC------TGCA----TTTTAATATAATTTTGTGTGCATTTTCTTAACAG-------------------------------------------CAAACAGCC--AGCAAG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCC--AGCAAG---------------AACAACA-.............................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGC........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCAC......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCC--AGCAAG---------------AACAA................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAG---------------AACAACA-AATAGCTGGGC-.................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...A--AAAA----------------------------C-AGCAGCAGT----------------TTTCTTG---AT------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................T------TTA--------------------------------------------GTTG----------TG--TGCCTGTG-----T-------CT.............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAG---------------AACAACA-AATAGCTGG....................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC--AGCAAG---------------AACAACA-AATAGCT......................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCAGT----------------TTTCTTG---AT------------------------ATATTTGGCT------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000
.................................................................................................................................................................................................................GAAATCCCTCTTTT----AA---T------TTA--------------------------------------------G.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TA--AAAA----------------------------C-AGCAGCAGT----------------TTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAACGTAAGCGA-AAAA----------------T-T..........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACA.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGCAGT----------------TTTCTTG---AT------------------------ATAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA-AATAGCTGGGC-A................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................G-----T-------CTCGTATC-----TATGCGT------GCGTC------TGCA----..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGC-AAA-------------------------------------AACAGGA-------CGCAC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA-AATAGCTGGGC-AAA-------------------------------------A........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TG----------TG--TGCCTGTG-----T-------CTCGTATC-----..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAG---------------AACAACA-AATAGC.......................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------C..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTG-----T-------CTCGTATC-----TATGC.............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATA--AAAA----------------------------C-AGCAGCAGT----------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGTATC-----TATGCGT------GCGTC------TG........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA-AATAGCTGGGC-AAA-------------------------------------.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CG.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--AGCAAG---------------AACAACA-AAT..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GCAGCAGT----------------TTTCTTG---AT------------------------ATATTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACA.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GT----------------TTTCTTG---AT------------------------ATATTTGGCT------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................G-----T-------CTCGTATC-----TATGCGT------GCGTC------TG........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GCCTGTG-----T-------CTCGTATC-----TA................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-AATAGCTGGGC-AAA-------------------------------------A........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG---------------AACAACA-AATAGCTGGGC-.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTTG---AT------------------------ATATTTGGCT------A----------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CAGT----------------TTTCTTG---AT------------------------ATATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCA.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AT------------------------ATATTTGGCT------A----------------------------------------AAAAACGC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CG.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCC--AGCAAG---------------AACAACA-AAT..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTG-----T-------CTCGTATC-----TATGCGT------GCGTC------TGC.......................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TG---AT------------------------ATATTTGGCT------A----------------------------------------AAAAACGCA.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CAAACGTAAGCGA-AAAA----------------T-TT------G..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CAGT----------------TTTCTTG---AT------------------------ATATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGCAGCAGT----------------TTTCTTG---AT------------------------ATATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG---------------AACAACA-AATAGCTGG....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG---------------AACAACA-AATAGCTGGG...................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGC-AAA-------------------------------------AACAGGA-------CGCA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...A--AAAA----------------------------C-AGCAGCAGT----------------TTTCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTG-----T-------CTCGTATC-----TATGCG............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTGGCT------A----------------------------------------AAAAACGCAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GT----------------TTTCTTG---AT------------------------ATATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGCAGT----------------TTTCTTG---AT------------------------ATATTTGGCT------A----------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTTCTTG---AT------------------------ATATTTGGCT------A----------------------------------------AAAAAC................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------AACAACA-AATAGCTGGGC-.................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------CAAACAGCC--AGCAAG---------------AACAACA-AATAGCT......................................................................3011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCC--AGCAAG---------------AACAACA-AATAGC.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................T----AA---T------TTA--------------------------------------------GTTG----------TG--TGCCTGTG-----.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGGGC-AAA-------------------------------------AACAGGA-------CG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG---------------AACAACA-AATAGCTG.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................TATTTGGCT------A----------------------------------------AAAAACGGTG............................................................................................................................................................................................................................................................................................................................................................................................................20170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droEre2
CAGA--AAAA----------------------------C-AGCAGCAGT----------------TTTTTTG---AA------------------------ATATTGGTAA------A----------------------------------------AAAAACGCAAACGTAGGCAA-AAAA----------------A-TT------AAAATCCCTATTTT----AT---T------GTA--------------------------------------------CTTGTGTGTGCTTGTG--TGCCTGTG-----T-------CTGGTATC-----TCTGCGT------GCGTG------AAAA----TTCTAATACAATTTGGTGTGCATTTTCTTGACAG-------------------------------------------CTA---------CCAGG---------------AACAACA-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AATAGCTGGGC-AAA-------------------------------------AACAGGA-------CGCA.......2611.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGG---------------AACAACA-AATAGCTGGGC-A................................................................2311.0011000000
droYak3
CAGA--AAAA----------------------------C-AGGAGCAGT----------------TTTGTTG---AA------------------------ATATTGGTAT------A----------------------------------------AAAAACGCAAACGTAAGCAA-AAAA----------------A-AT------TAAATCCCCCGTTT----AT---T------GTA--------------------------------------------CTTG----------TGTGTGCCTGTG-----T-------CTTATATC-----TCTGCGT------GCGTG------TGAA----TTCTAATACAATTTCGTGTGAATTTTCTTGACAG-------------------------------------------CAA---------ACAGG---------------AACAACA-AATAGCTAGGC-AAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-AATAGCTAGGC-AAA-------------------------------------AACAGGA-------CGCACA.....3116.00600000000006
......................................C-AGGAGCAGT----------------TTTGTTG---AA------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................GAA----TTCTAATACAATTTCGTGTG..............................................................................................................................................................................2311.00101000000000
..........................................GAGCAGT----------------TTTGTTG---AA------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-AATAGCTAGGC-AAA-------------------------------------AACAGGA-------CG.........2711.00101000000000
........................................AGGAGCAGT----------------TTTGTTG---AA------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGC-AAA-------------------------------------AACAGGA-------CGCA.......2011.00101000000000
CAGA--AAAA----------------------------C-AGGAGCAGT----------------TTTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................................................................TG---AA------------------------ATATTGGTAT------A----------------------------------------AAAAACGCAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
........AA----------------------------C-AGGAGCAGT----------------TTTGTTG---AA------------------------ATATTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..GA--AAAA----------------------------C-AGGAGCAGT----------------TTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................CTGCGT------GCGTG------TGAA----TTCTAA............................................................................................................................................................................................2111.00100100000000
droEug1
CAGA--AAAA----------------------------C-AG---CAGT----------------TTCGTTG---AA------------------------ATATTGGGC------------------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-TA------AAAATCCCTTTTAT----AT---T------GTACAACTGTG--------------------------------TGT----------GAGTGTG--TGTCTGTG-----T-------TTCGCATCGTCTCTCTGTATGAGTGTTTTTG------TGCA----TTTTAATACAATTTCGTGTGCATTTCCTTAACAG-------------------------------------------CAA---------CCAAGA----AC--------AACAACA-AATAACTGGGT-AAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotal
No Reads
droBia1
A--------A----------------------------C-AGCAGCACT----------------TTCGTTG---AA------------------------ATATTGGGC-------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-CA--AGAGCAAGTCCCTGTTTT-----T---TACACCAGTACAACTGTGTTTTTGTGCGTTGCGTATGTGGGTGGGCGGTGTGTGT------------GTG--TGTCTGTGTGCGTTCGCTTGTCCCATCTC-----CTTGT------GTTTGTG------TGCA----TTTTTATAAAATTTCGTGTGCATTTCCCTAACAG-------------------------------------------CAA---------GCAAG---------------AACAACAAAATAGCTGGGC-GAA-------------------------------------AACAGGA-------CGCACAACCGASizeHit CountTotal NormTotal
No Reads
droTak1
AGGCGAAAAA----------------------------C-AGCAGCAGT----------------TTCGTTG---AA------------------------ATATTGGGC-------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-ATAAAAACCAAATCCCTCTTTT----ATGCTTATA-CAGTAGA--TGTGTG----------------------------------CTTGTGCGT----GTGTGTGTGTGTG-----T-------CTCGTCCC-----TCTGT------GTTTGCG------TGCA----TTTTAATACAATTTCGTGTGCATTTCCTTAACAG-------------------------------------------CCA---------ACGAG---------------AACAACAGAAAAGCTGGGC-GAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotal
No Reads
droEle1
AA-----AAA----------------------------C-AGCG--AAT----------------TTCGTTG---AA------------------------ATATTGGGC-------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A--------------CCCTCTTTG----AT---T--------------------------------------------------------G----------------------------------------------------------------TG------TGCAAGTTTTTTAACACAATTTCGTGTGCATTTCCTCAACAG-------------------------------------------CAA---------A-AAC---------------AACAACA-AATAGCTAAGCGAAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotal
No Reads
droRho1
TGAA--AAAA----------------------------C-AGCG--AAT----------------TTCGTTC---AA------------------------ATATTGGGCT-----------------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-------------TCACTCTTAT----AT---A------------------------------------------------GTGT--------------------------------------------------------------------GTG------AGTT----TTTTAATAAAATTCCGTGTGCATTTCCCTAACAG-------------------------------------------CAA---------ACAAA---------------AACAACA-AAAAGCTAAGCGAAA-------------------------------------AACAGGA-------CGCACAA----SizeHit CountTotal NormTotal
No Reads
droFic1
AA-----AAA----------------------------C-AGCAGCAGT----------------TTCGTTG---AA------------------------ACATTGGGC------------------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------A-------------CCACTCT--T----AT---T------TTA--------------------------------------------CATG----------TG----TTTGTG-----T-------TTC--------------------------AGTGTATGTGCC----TTATAATACAATTTCGCGTGCATTTCCCTAACAG-------------------------------------------CAA---------CCAACA----TC--------AACAACA-AATA-TTGGCC-AAA-------------------------------------AGCAGGA-------CGCACAA----SizeHit CountTotal NormTotal
No Reads
droKik1
CAAA--ATTTG------------CTTCAGAAATAAAAAC-AACAGCAGG--------CATTTAGTTCTGTTCGGAGA------------------------GTATTGGCGA------A----------------------------------------AAAAACGCAAACGTAAGCGA-AAAA----------------T-CA------AGCATCCGTGT---------------------------------------------------------------------------------------------------------CTCACCTC-----TCTCCCT------GTCTC------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTTT--CAAATGTATCTGCTTTGCTT-ACACAAACAAAC-ACCAACAAA--------CATATG------------------------------C--ATATT---------------------------------------------------------ACTATAGCTTTTTTAGTTTA-TTGT----------------T------------------TTTGC----AA----------TT-----------------------------------------------------------------ACTTTG-----G-------CTGATTT-------------------------------------------------------------GTTTTTGTAAA-------------------------------------------AAA---------AAAAA---------------TACAAAA-AAAACTAAAGC-AGA-------------------------------------AGAAGCA-------AGTCAAG----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................TTTGCTT-ACACAAACAAAC-ACCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA-AAAACTAAAGC-AGA-------------------------------------AA.......................2050.201010000
droBip1
CGTAAAAAAA----------------------------A-GGCAGCAAATAGCCCAGCAATAAGTTCAGTTC---AG------------------------A---------------AAGAAAAAAGCGAAAGCGAAAGCACGAAAACTGAATAACGCAAAAGCAGAAACGTAAGCGA-AAAA----------------T-CA------AGCTGCCCTG----------------------------------------------------------CCGTGTGTACATA----------TG--TGTG---------------------------------------------------------------TGTAATTCAATTCCGTGTGCATTTCCTCAACAGCGCCACCGTCACAACATAGCACCAACAA----------------CA---------ACAAG-AAC-----------AACAA-------------C-AAA-------------------------------------AACA-------------ACAG----SizeHit CountTotal NormTotal
No Reads
dp5
TATCTTAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------ATATTTGCAGACCGGAAAGAAA----CGCAAG---AAGAACGAA---------------------AACCGTAAGCGA-AAAT----------------C-AG------CAAAT------------------T------TTA--------------CGTGCTGCGTGTCTC----TGCTGAGTGTAT------------GCG--TGTTTGTG----------------------------TGT------GTTTGAGTGAATG---------TGTAATACAATTCCGTGTGCATTTCCTTAACAG-------------------------------------------CCA---------CCAC---------------------------------------TACAACTACAACGACAACAAGGTGAAGGCAAA-----ACCAGGACAAGCAGCGCGCAA----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA-----ACCAGGACAAGCAGCGCGC......2312.0020200000000
........................................................................................................TTTGCAGACCGGAAAGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.............................................................................................................................................................................................................................................................................................................G--TGTTTGTG----------------------------TGT------GTTTGAGTG..............................................................................................................................................................................................................2111.0010100000000
.....................................................................................................ATATTTGCAGACCGGAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...............................................GT----------------TTAGCTCGGAAG------------------------ATATTTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......AAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACAACAAGGTGAAGGC.................................2111.0010000001000
...........................................................................................................GCAGACCGGAAAGAAA----CGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAGGTGAAGGCAAA-----AC.......................2011.0010000100000
.................................................................................................................CGGAAAGAAA----CGCAAG---AAGAACGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----ACCAGGACAAGCAGCGCGCAA----2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACAACAAGGTGAAGGCAAA-----ACC......................2611.0010001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAAGGTGAAGGCAAA-----ACCAGGAC.................2811.0010010000000
.....TAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGCAAA-----ACCAGGACAAGC.............2311.0010010000000
.....................................................................................................................AAGAAA----CGCAAG---AAGAACGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.ATCTTAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA-----ACCAGGACAAGCAGCGC........2111.0010100000000
...................................................................................................................................................................................................................................................................................................................TTGTG----------------------------TGT------GTTTGAGTGAATG---------A................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----ACCAGGACAAGCAGCGCGC......2111.0010100000000
droPer2
TATCTTAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------ATATTTGCAGACCGGAAAGAAA----CGCAAG---AAGAACGAA---------------------AACCGTAAGCGA-AAAT----------------C-AG------CAAAT------------------T------TTA--------------CGTGCTGCGTGTCTC----TGCTGAGTGT-----------------------------------------------A-----TGTGT------GTTTGAGTGAATG---------TGTAATACAATTCCGTGTGCATTTCCTTAACAG-------------------------------------------CCA---------CCAC---------------------------------------TACAACTACAACGACAACAAGGTGAAGGCAAA-----ACCAGGACAAGCAGCGCGCAA----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................GT----------------TTAGCTCGGAAG------------------------ATATTTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAGGTGAAGGCAAA-----ACCAGGAA.................2611.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACAACAAGGTGAAGGCAAA-----A........................2411.001010000
.ATCTTAAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACGACAACAAGGTGAAGGCAAA-----A........................2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACGACAACAAGGTGAAGGCAAA-----.........................2611.001010000
.......................................................................................................ATTTGCAGACCGGAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGGTGAAGGCAAA-----ACCAGGACA................2611.001010000
......AAAA------------------------------AG-----GT----------------TTAGCTCGGAAG------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
AATG--TTGA----------------------------T-AGAAGCATT----------------GT-CTTG---GT------------------------ATGGTTAACT---G--T----------------------------------------TAAGATATAGAT-TGGGCTATGAAA----------------T-TT------AATATTTCTCACTCTCTTACTCACAT----TTT------------------C-------------------------TCCT----------TG--TCTCTTTT-----T-------CTCTCTT-------------------------------CCA----TTTTTA-------------------------CTA--------------CAGATTATTGGCCT----------------CA---------ACATG-ATTTCCAGCAAGGAAACGACA-AAGAAT------GTG-------------------------------------GGCAA---------GGCGCAA----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAAT------GTG-------------------------------------GGCAA---------GGCG.......1911.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAAT------GTG-------------------------------------GGCAA---------GGCGC......2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACA-AAGAAT------GTG-------------------------------------GGCAA---------GGCG.......2511.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGACA-AAGAAT------GTG-------------------------------------GGCAA---------GGC........2511.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACA-AAGAAT------GTG-------------------------------------GGCAA---------GGCGCAA----2811.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACA-AAGAAT------GTG-------------------------------------GGCAA---------GGC........2411.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAGAAT------GTG-------------------------------------GGCAA---------GGCGTT.....2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA-AAGAAT------GTG-------------------------------------GGCAA---------GGCG.......2211.00100100
droVir3
AACA--ACAA----------------------------CAAGCAGCGGT---------TGTCAGTTTCAATT---AA----------------AAT-----CAATTGAGCT------C----------------------------------------AAT--------------------TATTTGATACGCAGATGAAATA------AAAAACCC------------------------G--------------CGCGCCACAAGTTTC----TGTTT-----------------------------------------------------------------------TCATA------C----------------GACGTT------------TGTGTGC----------------------------GTGTGTGTGTGTGGGTTT----GGCTGGTATG-TGGC------------CCTCG-----------------------AAAATGTTAAGAATATGGG-----------GGCGTGG-------CTAGCAA----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGGGTTT----GGCTGGTATG-...................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT----GGCTGGTATG-TGGC------------CCT................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT----GGCTGGTATG-TGGC------------CCTCG-----------------------AA.....................................................2511.001000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTT------------TGTGTGC----------------------------GTGTGTGTGT..........................................................................................................................20200.051000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTT------------TGTGTGC----------------------------GTGTGTGTG...........................................................................................................................19200.051000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT------------TGTGTGC----------------------------GTGTGTGTG...........................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
CAAG--AAAAAG---------------------AAGAAC-ACCAGCA---------------------------------------------------------------G------C----------------------------------------AAAAACAACAACACAAACAA-CAAC----------------T--T------GAAGTCACA-----------------------------------------------------------------------G----------TC--GGCCCACG-----C-------CTCAT-TC-----TGGGCGC------------------------------------------------------AGAAG-------------------------------------------CTG----CCTTGACATG-GGCAATAAA-----GAGAATT---------------------------------------TAAAGCGCC-----ATAGAAGCTGACGACGCAAGC----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........AAG---------------------AAGAAC-ACCAGCA---------------------------------------------------------------G------C----------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
.......AAAAG---------------------AAGAAC-ACCAGCA---------------------------------------------------------------G------C----------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................2040.251000010
droGri2
AATA--AACAG---------------------------C-AGCAGCAGC----------------AGCAGC-----CACAGCAGCAGCAACAGCAGCCATT---------------------------------------------------------AAAATTGCCAACATGATTGA-CGCC----------------A------------------CCTGC----AA----------TTA--------------------------------------------TTT------------------------------------------------------------------------------------------GAATCCCTATGCACTGTCTCAGCCA-------------------------------------------ACA---------GCAA---------------------------------------TACAGCAGCAGCAACAGCAGC-------AGCAGCAACAACAACA-----ACAACATCA----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:28 PM