ID:dsi_18499 |
Coordinate:3l:7922411-7922471 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7921613_7922410_+]; CDS [3l_7921613_7922410_+]; CDS [3l_7922472_7922695_+]; exon [3l_7922472_7922695_+]; intron [3l_7922411_7922471_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------################################################## CCCGATCGTCATTAATGTTGTCGGACACATTTTCCAGCACAACATCACTGGTGAGTTGGGTGTGCCCTCAATCGTTGATATCGTTTTAAAAATATCTGGTCATTTCTTCAGACTTCTATGAGGAAACCTTCTCCCTGGTCTACGACCTGACAGCCAAGGCC **************************************************((((.((((((((.........((.......))........))))))))))))........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
M025 embryo |
M053 female body |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................CTACGACCTGACAGCCAAGGC. | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................CTACGACCTGACAGCCAAGGCC | 22 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 |
| ................................................................................................................................TTCTCCCTGGTCTACGACCTGACAGCCA..... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................CTACGACCTGACAGCCAAGG.. | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............TGTTGTCGGACACATTTTCC.............................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ........................................................................................................................................GGTCTACGACCTGACAGCCAAGGCC | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ................GTTGTCGGACACATTTTCCAGCACA........................................................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................................................................................TGGTCTGCGACGTGACTGCCA..... | 21 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| .............AATGTTGTCGGACACATTTTCCAGCACA........................................................................................................................ | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................................................................ATGAGGAAACCTTCTCCCTGGTCTACGAC............... | 29 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..........................................................................TTGGTATCGTTCTAAAAA..................................................................... | 18 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 |
|
GGGCTAGCAGTAATTACAACAGCCTGTGTAAAAGGTCGTGTTGTAGTGACCACTCAACCCACACGGGAGTTAGCAACTATAGCAAAATTTTTATAGACCAGTAAAGAAGTCTGAAGATACTCCTTTGGAAGAGGGACCAGATGCTGGACTGTCGGTTCCGG
**************************************************((((.((((((((.........((.......))........))))))))))))........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
O002 Head |
M024 male body |
SRR902008 ovaries |
M023 head |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................CCAGATGCTGGACTGTCGG...... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................TGTAGTGACCACTCAACC...................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............TACAACAGGCTATTTAAAAGG.............................................................................................................................. | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................TGCGGGAGTTAGCAACTTT................................................................................. | 19 | 3 | 20 | 0.20 | 4 | 0 | 0 | 2 | 0 | 2 | 0 |
| .............................................................TGCGGGAGTTAGCAACTT.................................................................................. | 18 | 3 | 20 | 0.15 | 3 | 0 | 0 | 2 | 0 | 1 | 0 |
| ..............................................................GCGGGAGTTAGCAACTTT................................................................................. | 18 | 2 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................................................AGAGTGACCAGAGGCTG............... | 17 | 2 | 16 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .....................................................................................................................TACTTGTTAGGAAGAGGGA......................... | 19 | 3 | 18 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:33 AM