ID:

dsi_18472

 Coordinate:

2r:6160458-6160607 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.0 -16.8 -16.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AACACCAATGCGAGCAACAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTCAACTGAGTGAATTTTAAACATAGGAACAAGCTGCACGGTTCCATAAGAATTTATGAATAGCTTTAACAACCGAGTGAAACTTTCTACTTTCGTATTTGGTCCGATTAGGAAAAACAATCCCAAGCACCTCTGTAGTGAAACTTTGTTTCAAACTCTCTTTTACACAGACAACAAACGTTCTAAATTAGTAG
************************************************************************....(((.(((...((((((((.(((((.....)))))..))..))))))......((((((((((........))))..))))))(((.....)))................))).)))...******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902009
testis
............................................................................................................................................................................................CTGTAGTGACACTCTGTTTGA......................................... 21 3 2 11.00 22 18 0 2 0 0 0 2 0 0
...........................................CCAATCAGTGAGGGTCAACTGAGTG...................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 0 0 0 0 2 0
..............................................................................................................................................................................AATCCCAAGCACCTCTGTAGT....................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................TCCCAAGCACCTCTGTAGTGAAACTT................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................ATCCCAAGCACCTCTGTAGTGAAAC.................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................TCCCAAGCACCTCTGTAGTGAAACT................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................CTGTAGTGACACTCTGTTTGAA........................................ 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................AACAATCCCAAGCACCTCTGTAGTGAA.................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................CTGTAGTGATACTCTGTTTGAAA....................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GCACCTCTGTAGTGAAACT................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TTTTACACAGACAACAAACGTTCTAAA....... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................CACCTCTGTAGTGAAACTTTGTTTCAAAC...................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................GCACCTCTGTAGTGAAACTT................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................CTGTAGTGACACTCTGTTTGAAA....................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTTACACAGACAACAAACGTTCTAAA....... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................TTAAACATAGGAACAAGCTGCACGG......................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1
......................................................................................AAGCTGCACGGTTCCATAAG................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................TTTGTTTCCAACTCTCTTTTACACAGAC...................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................TAAACATAGGAACAAGCTGCACGGTT....................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................ACAATCCCAAGCACCTCTGTAGTGAAAC.................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................ACCTCTGTAGTGAAACTTTGTTTCCAAC...................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................ACCTCTGTAGTGAAACTTTGTTTCAAAC...................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................CTGTAGTGACACTCTGTTT........................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................TGAATGTTAAATATAGGAA..................................................................................................................................................................... 19 2 9 0.33 3 0 3 0 0 0 0 0 0 0
......................................................................................................................................................................................GCACCTCTGTCGTTATACT................................................. 19 3 4 0.25 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................TACAGAGACAACAACCGT............. 18 2 6 0.17 1 0 0 0 0 0 1 0 0 0
.............................................................................................ACGGTACCGTAAGAAT............................................................................................................................................. 16 2 13 0.15 2 0 0 0 0 0 0 2 0 0
...............................................TCAGTGAGGGTCCCC............................................................................................................................................................................................ 15 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TTGTGGTTACGCTCGTTGTTGTTGTTAGATGTGGTTTATGTTAGGTTAGTCACTCCCAGTTGACTCACTTAAAATTTGTATCCTTGTTCGACGTGCCAAGGTATTCTTAAATACTTATCGAAATTGTTGGCTCACTTTGAAAGATGAAAGCATAAACCAGGCTAATCCTTTTTGTTAGGGTTCGTGGAGACATCACTTTGAAACAAAGTTTGAGAGAAAATGTGTCTGTTGTTTGCAAGATTTAATCATC
*******************************************************....(((.(((...((((((((.(((((.....)))))..))..))))))......((((((((((........))))..))))))(((.....)))................))).)))...************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 GSM343915
embryo
 M023
head
 SRR618934
dsim w501 ovaries
............................ATGTGGTTTATGTTAGGTTAG......................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................................................................................TTTTGTTAGGGTTCGTGGAGAC........................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..........................AGATGTGGTTTATGTTTGGTT........................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAGAAAAAGTGTCTGTTGT.................. 19 1 2 0.50 1 0 1 0 0 0 0 0
......................................................................................TTTGACGAGCCAAGGTGTTCT............................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0
................................................................................TCCTAGTTCGGCGTGCC......................................................................................................................................................... 17 2 6 0.17 1 0 1 0 0 0 0 0
...............................................................................ATCCTAGTTCGGCGTGCCC........................................................................................................................................................ 19 3 6 0.17 1 0 0 1 0 0 0 0
..........................AGAAGGGGTTTATGATAGGTT........................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 1 0 0 0
....................................TGTGTTAGGTTATTCAC..................................................................................................................................................................................................... 17 2 20 0.10 2 0 0 2 0 0 0 0
..............GTTGTCGTTGTTAGATGGAGT....................................................................................................................................................................................................................... 21 3 13 0.08 1 0 1 0 0 0 0 0
......................................TGTTAGGTTATTCAC..................................................................................................................................................................................................... 15 1 14 0.07 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................AAACAAAGCATGAGAGAAA............................... 19 2 14 0.07 1 0 1 0 0 0 0 0
..............................GTGGTATATTTTAGGTGAGT........................................................................................................................................................................................................ 20 3 18 0.06 1 0 0 0 0 1 0 0
................................................................................TCCCTGTTCGGCGTGCCC........................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 1 0
..............................................................................................................................................................................ATAGGGTACGTGGAGACT.......................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6160408-6160657 + dsi_18472 AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---GT-CCG-ATT----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---TTAGTAG--------------------------
droSec2 scaffold_1:2990235-2990484 + AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCG-ATT----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---TTAGTAG--------------------------
dm3 chr2R:5365070-5365319 + AAT---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCG-ATT----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACTGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---TTAGTAG--------------------------
droEre2 scaffold_4929:8987203-8987455 - AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACGGAA-----CAAGCTGC---------------------------------GGTTCCTTAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCG-ACT----------------------AGGAA-----ACA-TAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACAACAG---------------------------------A---------AGAT-----------------------------CTAAA---TTAGTAG--------------------------
droYak3 2L:18021704-18021953 + AAC---ACCAATGCGAGCA---A---------CAGCAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCA-ATT----------------------AGGAA-----AAA-TAATCCCAAGCACCTCT-----GTAGTGAAACTAT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACTACAA---------------------------------A---------AAAT-----------------------------CTAAA---TTAGTAG--------------------------
droEug1 scf7180000409183:995156-995409 + AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACGAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACA----------GGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCA-ATT----------------------TGGAA-----AAA-CAATACCCAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---ACCC--CC----CTC-----TCTCTCTATATCTTTGA--------------------------------------CA---------CACT-----------------------------CTGAA---TTAGTAG--------------------------
droBia1 scf7180000301506:1350333-1350603 - AACATCACCAATGCAGGCA---ACAACAACAACCACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAACATAGGAACGC---------GGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-AAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCAAATT----------------------TGGAA-----AAA-CAATCCCATGCACCTCT-----GTAGTGGAACTTT--GTTTC---AAA--AC------------------TCTCTCTACAACACAGACAACAC--------------------------ACC---CA---------CACT-----------------------------CTGAA---TTAGTAG--------------------------
droTak1 scf7180000415401:415807-416071 + AAC---ACCAATGCGGGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACC--------CAGGCTGC-------------------------------GCGGTTCCATAAGAATTTATGAATAGCTTTAA-CAATCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-ATT----------------------TGGAATTCCAAAA-CAATCCCAAGCACCTCT-----GTAGTGGAACTTT--GTTTC---AAA--AC------------------TCTCTCT--AACACAGATAACAC--------------------------AGTCAACA---------CACT-----------------------------CTGAA---TTAGTAG--------------------------
droEle1 scf7180000491107:1743320-1743581 - AAC---ACCAGTGCGAGCAGAAA---------CAACAACAATCTATACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACAT---------GGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTAATTG---TT-CCG-ATT----------------------TGGAA-----AAA-CAATCCCGAGCACCTCT-----GTAGTGGAACTTT--GTTTC---AAAC-AC------------------TCTCTCT--AACACAGACAACAA------CA------------------AC---ACA---------CACT-----------------------------CTGTA---TTAGTAG--------------------------
droRho1 scf7180000777217:255710-255959 + AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACTTAGGAACA----------AGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTAATCT---TT-CCG-ATT----------------------TGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AA------------------TCTCTCT--GACACAGACATCAC---------------------------------A---------CACT-----------------------------CTGAA---TTAGTAG--------------------------
droFic1 scf7180000453858:1331042-1331291 - ATC---AACAATGCGAACA---A---------CAACAACAATCTACACCAAATGCAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAAGATAGGAACA----------CGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-ATT----------------------TGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGGAACTTT--GTTTC---AA---AC------------------TCTCTAT--AACACAAACCACAC---------------------------------A---------CAAT-----------------------------CTGAA---TTAGTAG--------------------------
droKik1 scf7180000302476:750823-751090 + AAC---ACCAGTGCCAGCA---A---------CATCAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC----GCCAACTGAGTGAAGAA------CTTTTAACATAGGAACG----------AGCTGC-------------------------------A-TGTTCCATAAGAATTTATGAATAGCTTTAA-CAATCGAGTGAAAC-----------------TTTCTACTTTCGTATTCGTTGTT-CCC-CTT----------------------AGGAC----AAAACCAATCCCAAGCACCTCTA---TATAGTGGAACTTT--GTTTCTCTAAA--AC------------------TCTCTAG--AACATACACCACAC----A---------------------------CA---------TACA-----------------------------CTGAA---TTAGTAG--------------------------
droAna3 scaffold_13266:253664-253930 - ACT---ACCAATGCAAACA---A---------CATCAACAATCTACACCAAATGCAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAACATAGGAACG----------AGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAAAAAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-ATT----------------------TGGAA----AAAA-CAATCCCCAGCACCTCC-----GTAGTGAAACTTT--GTTTC---AAATAAC------------------TCTCTAA--AAAACACAC---------ACGTA------------------------------------CACGTACT----ATATAATGAATT-TT------------TTAGTAG--------------------------
droBip1 scf7180000396730:1273319-1273592 - AAT---ACCAATGCAAACA---C---------CATCAACAATCTACACCAAATGCAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAACATAGGAACG----------AGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAAACAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-CTT----------------------TGGAA----AAAA-CAATCCCCAGCACCTCC-----GTAGTGAAACTTT--GTTTC---AAAAAAC------------------TCTCTAA--AAAA------ACACACACACGTA------------------------------------CACGTACTAAGTATATAATGAATT-TT------------TTAGTAG--------------------------
dp5 3:13952711-13952977 - AAC---ACCTATACGAACA---G---------CATCAACAATCTA---------CAATCCAATCAGTGAGGGTA-------AACTGAGTG---AA------TTTTTAACATAGGAACG----------GGCCACAACAG---------------------GCCACCGCGTTCCATAAGAATTTATGAATAGCTTTAA-CAACTGAGTGAAAC----------------GTTTCTACTTTCGTATTTA---TTTTCG-ATT----------------------AGA-------CTA-CAATCCCGAGCACCTCT-----GTAGTAGAACTCT--GCTTC---CA---GCTC--AA----CTCTCTCT-CTCT-------------------------TTCTCTCTCTAT-----------------CTAAGAC---T-----------------------CTATCACTGAA---TTATTAG--------------------------
droPer2 scaffold_4:1367041-1367308 + AAC---ACCTATACGAACA---G---------CATCAACAATCTA---------CAATCCAATCAGTGAGGGTA-------AACTGAGTG---AA------TTTTTAACATAGGAACG----------GGCTACAACAG---------------------GCCACCGCGTTCCATAAGAATTTATGAATAGCTTTAA-CAACTGAGTGAAAC----------------GTTTCTACTTTCGTATTTA---TTTTCG-ATT----------------------AGA-------CTA-CAATCCCGAGCACCTCT-----GTAGTAGAACTCT--GCTTC---CA---GCTC--AA----CTCTCTCT-CTCT-------------------------TTCTCTCTCTAT-----------------CTATGAC---T-------------------------ATCACTCAATTATTAGAAA--------------------------
droWil2 scf2_1100000004514:744418-744714 - TAT-----TACTCAGAGCAACAA---------CGTCAACAATCTACACCAAATGCAATCCAATCAGTGA---TA-------AACTGATCTATGAAACTTTACTTATTTTATAGGAACGATTAAATTC-AGTTTC--------------------------AAAATATTGTTCAATAAGAATTTATGAATAGCTTTAA-CAACTGAGTGAAAAAAAATACAAACAAACAATTTCTACTTTCGTATTTG---TT-TAA-ACAAAAAAAAAAAACAAAAAAGTATAAGAA-------------TT---GCACCCTAACAAAGTAGTTTAACAAT-TCTTTC---------------------------------------------------------------------------------------------------------------------------------------TTAGTAGCAAAAAGAAAAAAAGAAATCAGAGAA
droVir3 scaffold_10324:138935-139208 + A-------------------------------CAGCAACAATGTGCAGCACATGCAACCCAATCAATGAGCGCAGCTTC-CAACTAAGTG---AA------TTTTAAGCTTGGAAGAG----------AGAAACGATCGATAAGCGATATAT--------AAAACTATGTTCAATAAGAATTTATTAATAGCTTTAA-CAACTGAGTGAAAC-----------------TTTCTACTTTCATAATTG---TT-T---ATT----------------------AAGAC-------------ACGCAGCACCTCT----TGTAGTGGAACTTT-CGTTTC---TT---ACTT--TATATGATATATCT-ATAT-------------------------CTATATATATATATA--T-------ATCTATATAAA---T------------------------T------------GTAGTAG--------------------------
droMoj3 scaffold_6496:1954839-1955099 + AGC---AACAAT------A---A---------CATCAACAATCTGCAACATATGCAATCCAATCAATGAGAGAG-------AAGCGAAA---------------------------AG----------AGAAGCAAAAA------AATATATATGGAATAAAAACTATGTTCAATAAGAATTTATTAATAGCTTTAA-CAACTGAGTGAAAC-----------------TTTCTACTTTCATAATTG---TT-T---ATT----------------------AAGAC-------------ACGCAGCACCTCT----TGTAGTGGAACTTTTCGTTTT---TG---ACTT--GA----------------T----AATACTTAT---------ATATA-------TATATACCTATATATATA---------AATT------------------A-TATAT------------GTAATAG--------------------------
droGri2 scaffold_15245:15487269-15487536 - AAC---AACAA------CA---A---------TAACAACAATCTGCAACACATGCAACCCAATCAATGAGCGCAACTTGCAAACTGAGTG---AA------TTTTAATCATAAGAATATCA-----CAAGAAGAAAGAA---------------------AAAACTATGTTCAATAAGAATTTATTAATAGCTTTAA-CAACTGAGTGAAAC-----------------TTTCTACTTTCATAATTG---TT-T---ATT----------------------AAGAC-------------ACGCAGCACCTCT----TGTAGTCGAACTTT-CGTTTC---TT---ACTCCTAA----------------TAT--TATATATAC------------TTATATATATGT-----------------ATACAAA---T-----------------------AT------------GTAGTAG--------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---GT-CCG-ATT----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---TTAGTAG--------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................CCAATCAGTGAGGGTC-------AACTGAGTG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2512.00202000000000000000
.........................................................................................................................................................................................................................................................................................................AATCCCAAGCACCTCT-----GTAGT.......................................................................................................................................................................................2111.00100010000000000000
...........................................................................................................................................................................................................................................................................................................TCCCAAGCACCTCT-----GTAGTGAAACTT................................................................................................................................................................................2611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................ATCCCAAGCACCTCT-----GTAGTGAAAC..................................................................................................................................................................................2511.00100000000000001000
...........................................................................................................................................................................................................................................................................................................TCCCAAGCACCTCT-----GTAGTGAAACT.................................................................................................................................................................................2511.00100000000001000000
.....................................................................................................................................................................................................................................................................................................AA-CAATCCCAAGCACCTCT-----GTAGTGAA....................................................................................................................................................................................2711.00100000000000010000
.................................................................................................................................................................................................................................................................................................................GCACCTCT-----GTAGTGAAACT.................................................................................................................................................................................1911.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTT--TACACAGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---.................................2711.00100000001000000000
..................................................................................................................................................................................................................................................................................................................CACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------............................................................................................................................................2911.00100000010000000000
.................................................................................................................................................................................................................................................................................................................GCACCTCT-----GTAGTGAAACTT................................................................................................................................................................................2011.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................TT--TACACAGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---.................................2611.00100000001000000000
.......................................................................................................TTAAACATAGGAACA----------AGCTGC-------------------------------ACGG.................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
.....................................................................................................................A----------AGCTGC-------------------------------ACGGTTCCATAAG........................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
........................................................................................................TAAACATAGGAACA----------AGCTGC-------------------------------ACGGTT...............................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
......................................................................................................................................................................................................................................................................................................A-CAATCCCAAGCACCTCT-----GTAGTGAAAC..................................................................................................................................................................................2811.00100000000000010000
...................................................................................................................................................................................................................................................................................................................ACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------............................................................................................................................................2811.00100000010000000000
droSec2
AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCG-ATT----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---TTAGTAG--------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................ATAGGAACA----------AGCTGC-------------------------------ACGGTT...............................................................................................................................................................................................................................................................................................................................................2111.0010100
.........................................................................................................................................................................................................................................................................................................AATCCCAAGCACCTCT-----GTAGTGA.....................................................................................................................................................................................2311.0010100
.............................................................................................................................................................................................................................................................................................................................................GTTTC---AA---AC------------------TCTCTTT--TACACA.............................................................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................................AA-CAATCCCAAGCACCTCT-----GTAGTGA.....................................................................................................................................................................................2611.0010010
dm3
AAT---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCG-ATT----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACTGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---TTAGTAG--------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................TTTCTACTTTCGTATTTG---CT-CCG-A........................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................A-CAATCCCAAGCACCTCT-----GTAGTGAAAC..................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CTACTTTCGTATTTG---CT-CCG-A........................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AGCTGC-------------------------------ACGGTTCCATAAG........................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTC........................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AC-----------------TTTCTACTTTCGTATTTG---CT-CCG-AT.......................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................ACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------............................................................................................................................................2812.0020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................CTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------............................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCAATGCGAGCA---A---------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................C---AA---AC------------------TCTCTTT--TACACTGA...........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CCAAATACAATCCAATCAGTGAGGGTC-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTT--TACACTGACAACAA---------------------------------A---------CGT.......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................TC-------AACTGAGTG---AA------TTTTAAACATA..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAGTG---AA------TTTTAAACATAGGAACA----------AGC.......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AAGAATTTATGAATAGCTTTAA-CAACCGAG............................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TCTTT--TACACTGACAACAA---------------------------------A---------CGTT-----------------------------CTAAA---.................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAAATACAATCCAATCAGTGAGGGTC-------AAC......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCAGTGAGGGTC-------AACTGAGTG---AA------TTT..................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGAGGGTC-------AACTGAGTG---AA------TTTTA................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TCGTATTTG---CT-CCG-ATT----------------------AGGAA-----AAA-C.................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................TTTAAACATAGGAACA----------AGCTGC-------------------------------ACGG.................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TTCTACTTTCGTATTTG---CT-CCG-AT.......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TC---AA---AC------------------TCTCTTT--TACACTGACAACAA---------------------------------....................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CTACTTTCGTATTTG---CT-CCG-T........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................A------TTTTAAACATAGGAACA----------AGCTGC-------------------------------ACG..................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCTCTTT--TACACTGACAA........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GC-------------------------------ACGGTTCCATAAGAATTT...................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TAA-CAACCGAGTGAAAC-----------------TTTCT................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TC---AA---AC------------------TCTCTTT--TACACTGACAACAA---------------------------------A---------..........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTC---AA---AC------------------TCTCTTT--TACACTGACAACA......................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCCCAAGCACCTCT-----GTAGTGAAAC..................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CGGTTCCATAAGAATTTATGAA..............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TTCTACTTTCGTATTTG---C...............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TTTATGAATAGCTTTAA-CAACC...............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAAGAATTTATGAATAGCT.........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................C------------------TCTCTTT--TACACTGACAACAA---------------------------------A---------CGT.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................A-----AAA-CAATCCCAAGCACCTCT-----GTAGT.......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................CAAATACAATCCAATCAGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------T...........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................GAGGGTC-------AACTGAGTG---AA------TTTTAAACA............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................CTACACCAAATACAATCCAATCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TGC-------------------------------ACGGTTCCATAAGAATTT...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGAGGGTC-------AACTGAGTG---AA------TTTTAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................................................................................................................................................................................................................................................................................................................................................TC---AA---AC------------------TCTCTTT--TACACTGACAACAA---------------------------------A---------CG........................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTAAACATAGGAACA----------AGCTGC-------------------------------ACGGT................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................A-CAATCCCAAGCACCTCT-----GTAGTGA.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................................................................TCCCAAGCACCTCT-----GTAGTGAAACTT................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AC------------------TCTCTTT--TACACTGACAACAA---------------------------------A---------CGTT-----------------------------.........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................TAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAA.........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATTTG---CT-CCG-ATT----------------------AGGAA-----AAA-C.................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AAGCACCTCT-----GTAGTGAA....................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CCAAGCACCTCT-----GTAGTGAAACTTT--GT...........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................G---AA------TTTTAAACATAGGAACA----------AGCTGC-------------------------------A....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TAAACATAGGAACA----------AGCTGC-------------------------------ACGGTT...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................T----------------------AGGAA-----AAA-CAATCCCAAGCACCTCT-----GT..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCCCAAGCACCTCT-----GTAGTGAAACT.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CAAGCACCTCT-----GTAGTGAAACTTT--GTT..........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ACATAGGAACA----------AGCTGC-------------------------------ACGG.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........TGCGAGCA---A---------CAACAACAATCTACACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACGGAA-----CAAGCTGC---------------------------------GGTTCCTTAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCG-ACT----------------------AGGAA-----ACA-TAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACAACAG---------------------------------A---------AGAT-----------------------------CTAAA---TTAGTAG--------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................CCTTAAGAATTTATGAATAGC..........................................................................................................................................................................................................................................................................................................................2111.0011000000
............GCGAGCA---A---------CAACAACAATCTACACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.............................................................ATCAGTGAGGGTC-------AACTGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
............................................................................................................CATAGGAACGGAA-----CAAGCTGC---------------------------------GGTT...............................................................................................................................................................................................................................................................................................................................................2511.0010100000
..................................................................................................................................................................................................................................................ATTTG---CT-CCG-ACT----------------------AGGAA-----ACA-..................................................................................................................................................................................................................2111.0010000100
.....................................................................................................................................................................................................................................................................................................................................AACTTT--GTTTC---AA---AC------------------TCTCTTT--TACACA.............................................................................................................................2811.0011000000
droYak3
AAC---ACCAATGCGAGCA---A---------CAGCAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACA----------AGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---CT-CCA-ATT----------------------AGGAA-----AAA-TAATCCCAAGCACCTCT-----GTAGTGAAACTAT--GTTTC---AA---AC------------------TCTCTTT--TACACAGACTACAA---------------------------------A---------AAAT-----------------------------CTAAA---TTAGTAG--------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................TACAATCCAATCAGTGAGGGTC-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...................................................................GAGGGTC-------AACTGAGTG---AA------T....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..................................................................................ACTGAGTG---AA------TTTTTAACATAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............................................................................................A------TTTTTAACATAGGAACA----------AGCTGC-------------------------------ACG..................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.........................................................................................................................................................................................................................................................................................................AATCCCAAGCACCTCT-----GT..........................................................................................................................................................................................1811.00100001000000
...................................................ATACAATCCAATCAGTGAGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACGAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACA----------GGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCA-ATT----------------------TGGAA-----AAA-CAATACCCAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---ACCC--CC----CTC-----TCTCTCTATATCTTTGA--------------------------------------CA---------CACT-----------------------------CTGAA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AACATCACCAATGCAGGCA---ACAACAACAACCACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAACATAGGAACGC---------GGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-AAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCAAATT----------------------TGGAA-----AAA-CAATCCCATGCACCTCT-----GTAGTGGAACTTT--GTTTC---AAA--AC------------------TCTCTCTACAACACAGACAACAC--------------------------ACC---CA---------CACT-----------------------------CTGAA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAC---ACCAATGCGGGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACC--------CAGGCTGC-------------------------------GCGGTTCCATAAGAATTTATGAATAGCTTTAA-CAATCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-ATT----------------------TGGAATTCCAAAA-CAATCCCAAGCACCTCT-----GTAGTGGAACTTT--GTTTC---AAA--AC------------------TCTCTCT--AACACAGATAACAC--------------------------AGTCAACA---------CACT-----------------------------CTGAA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAC---ACCAGTGCGAGCAGAAA---------CAACAACAATCTATACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACATAGGAACAT---------GGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTAATTG---TT-CCG-ATT----------------------TGGAA-----AAA-CAATCCCGAGCACCTCT-----GTAGTGGAACTTT--GTTTC---AAAC-AC------------------TCTCTCT--AACACAGACAACAA------CA------------------AC---ACA---------CACT-----------------------------CTGTA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAC---ACCAATGCGAGCA---A---------CAACAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------TTTTTAACTTAGGAACA----------AGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTAATCT---TT-CCG-ATT----------------------TGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGAAACTTT--GTTTC---AA---AA------------------TCTCTCT--GACACAGACATCAC---------------------------------A---------CACT-----------------------------CTGAA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATC---AACAATGCGAACA---A---------CAACAACAATCTACACCAAATGCAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAAGATAGGAACA----------CGCTGC-------------------------------ACGGTTCCATAAGAATTTATGAATAGCTTTAA-CAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-ATT----------------------TGGAA-----AAA-CAATCCCAAGCACCTCT-----GTAGTGGAACTTT--GTTTC---AA---AC------------------TCTCTAT--AACACAAACCACAC---------------------------------A---------CAAT-----------------------------CTGAA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAC---ACCAGTGCCAGCA---A---------CATCAACAATCTACACCAAATACAATCCAATCAGTGAGGGTC----GCCAACTGAGTGAAGAA------CTTTTAACATAGGAACG----------AGCTGC-------------------------------A-TGTTCCATAAGAATTTATGAATAGCTTTAA-CAATCGAGTGAAAC-----------------TTTCTACTTTCGTATTCGTTGTT-CCC-CTT----------------------AGGAC----AAAACCAATCCCAAGCACCTCTA---TATAGTGGAACTTT--GTTTCTCTAAA--AC------------------TCTCTAG--AACATACACCACAC----A---------------------------CA---------TACA-----------------------------CTGAA---TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ACT---ACCAATGCAAACA---A---------CATCAACAATCTACACCAAATGCAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAACATAGGAACG----------AGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAAAAAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-ATT----------------------TGGAA----AAAA-CAATCCCCAGCACCTCC-----GTAGTGAAACTTT--GTTTC---AAATAAC------------------TCTCTAA--AAAACACAC---------ACGTA------------------------------------CACGTACT----ATATAATGAATT-TT------------TTAGTAG--------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................GAATAGCTTTAAAAAACCGAGT...........................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................AAA-CAATCCCCAGCACCTCC-----GTAGC.......................................................................................................................................................................................2511.001010000
.........................................................................C-------AACTGAGTG---AA------CTTTTAACATAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................................................................................................................................ATCCCCAGCACCTCC-----GTAGTG......................................................................................................................................................................................2111.001010000
.........................................................................................G---AA------CTTTTAACATAGGAACG----------AGC.......................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
.........................................................................................................TAACATAGGAACG----------AGCTGC-------------------------------.....................................................................................................................................................................................................................................................................................................................................................1911.001000010
droBip1
AAT---ACCAATGCAAACA---C---------CATCAACAATCTACACCAAATGCAATCCAATCAGTGAGGGTC-------AACTGAGTG---AA------CTTTTAACATAGGAACG----------AGCTGC-------------------------------ACTGTTCCATAAGAATTTATGAATAGCTTTAAACAACCGAGTGAAAC-----------------TTTCTACTTTCGTATTTG---TT-CCG-CTT----------------------TGGAA----AAAA-CAATCCCCAGCACCTCC-----GTAGTGAAACTTT--GTTTC---AAAAAAC------------------TCTCTAA--AAAA------ACACACACACGTA------------------------------------CACGTACTAAGTATATAATGAATT-TT------------TTAGTAG--------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAC---ACCTATACGAACA---G---------CATCAACAATCTA---------CAATCCAATCAGTGAGGGTA-------AACTGAGTG---AA------TTTTTAACATAGGAACG----------GGCCACAACAG---------------------GCCACCGCGTTCCATAAGAATTTATGAATAGCTTTAA-CAACTGAGTGAAAC----------------GTTTCTACTTTCGTATTTA---TTTTCG-ATT----------------------AGA-------CTA-CAATCCCGAGCACCTCT-----GTAGTAGAACTCT--GCTTC---CA---GCTC--AA----CTCTCTCT-CTCT-------------------------TTCTCTCTCTAT-----------------CTAAGAC---T-----------------------CTATCACTGAA---TTATTAG--------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCTAT-----------------CTAAGAC---T-----------------------CTATCAC........................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................AGCACCTCT-----GTAGTAGAACTCT--G............................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTAT-----------------CTAAGAC---T-----------------------CTATC..........................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTCTCTAT-----------------CTAAGAC---T-----------------------CTATCAC........................................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCTCTCTCTAT-----------------CTAAGAC---T-----------------------CTATCAC........................................2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................GTAGAACTCT--GCTTC---CA---GCTC--AA----CT..................................................................................................................................................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................TCCCGAGCACCTCT-----GTAGTAGAACTC................................................................................................................................................................................2611.0010100000000
......................................................................................................TTTTAACATAGGAACG----------GGCCACAACAG---------------------GC........................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
droPer2
AAC---ACCTATACGAACA---G---------CATCAACAATCTA---------CAATCCAATCAGTGAGGGTA-------AACTGAGTG---AA------TTTTTAACATAGGAACG----------GGCTACAACAG---------------------GCCACCGCGTTCCATAAGAATTTATGAATAGCTTTAA-CAACTGAGTGAAAC----------------GTTTCTACTTTCGTATTTA---TTTTCG-ATT----------------------AGA-------CTA-CAATCCCGAGCACCTCT-----GTAGTAGAACTCT--GCTTC---CA---GCTC--AA----CTCTCTCT-CTCT-------------------------TTCTCTCTCTAT-----------------CTATGAC---T-------------------------ATCACTCAATTATTAGAAA--------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................GTAGAACTCT--GCTTC---CA---GCT.............................................................................................................................................................2013.003300000
.................................................................................................................................................................................................................................................................................................................GCACCTCT-----GTAGTAGAACTCT--GCTTC---.....................................................................................................................................................................2612.002200000
.................................................................................................................................................................................................................................................................................................................................GTAGAACTCT--GCTTC---CA---GCTC--AA----CT..................................................................................................................................................2512.002200000
...................................................................................................................................................................................................................................................TTTA---TTTTCG-ATT----------------------AGA-------CTA-CAATCCCGA.........................................................................................................................................................................................................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................GCTC--AA----CTCTCTCT-CTCT-------------------------TTCTCTCT......................................................................................................2611.001100000
.................................................................................................................................................................................................TTAA-CAACTGAGTGAAAC----------------GTTT..................................................................................................................................................................................................................................................................................2211.001010000
.................................................................GTGAGGGTA-------AACTGAGTG---AA------T....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................................A-------AACTGAGTG---AA------TTTTTAAC.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................A-------AACTGAGTG---AA------TTTTTAACATAGG........................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.................................................................................................................................................................................................................................................................................................................GCACCTCT-----GTAGTAGAACTCT--G............................................................................................................................................................................2211.001001000
droWil2
TAT-----TACTCAGAGCAACAA---------CGTCAACAATCTACACCAAATGCAATCCAATCAGTGA---TA-------AACTGATCTATGAAACTTTACTTATTTTATAGGAACGATTAAATTC-AGTTTC--------------------------AAAATATTGTTCAATAAGAATTTATGAATAGCTTTAA-CAACTGAGTGAAAAAAAATACAAACAAACAATTTCTACTTTCGTATTTG---TT-TAA-ACAAAAAAAAAAAACAAAAAAGTATAAGAA-------------TT---GCACCCTAACAAAGTAGTTTAACAAT-TCTTTC---------------------------------------------------------------------------------------------------------------------------------------TTAGTAGCAAAAAGAAAAAAAGAAATCAGAGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................TACAAACAAACAATTTCTACTTTCGT........................................................................................................................................................................................................................................................................2611.00110000
TAT-----TACTCAGAGCAACAA---------CGTCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......................................................................................................................................................................................................................................................................................GTATAAGAA-------------TT---GCACCCTAACAAAGT..........................................................................................................................................................................................2611.00101000
.............................................................................................................................TC-AGTTTC--------------------------AAAATATTGTT...............................................................................................................................................................................................................................................................................................................................................1911.00100010
TAT-----TACTCAGAGCAACAA---------CGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
A-------------------------------CAGCAACAATGTGCAGCACATGCAACCCAATCAATGAGCGCAGCTTC-CAACTAAGTG---AA------TTTTAAGCTTGGAAGAG----------AGAAACGATCGATAAGCGATATAT--------AAAACTATGTTCAATAAGAATTTATTAATAGCTTTAA-CAACTGAGTGAAAC-----------------TTTCTACTTTCATAATTG---TT-T---ATT----------------------AAGAC-------------ACGCAGCACCTCT----TGTAGTGGAACTTT-CGTTTC---TT---ACTT--TATATGATATATCT-ATAT-------------------------CTATATATATATATA--T-------ATCTATATAAA---T------------------------T------------GTAGTAG--------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................ATGTGCAGCACATGCAACCCAATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CCTCT----TGTAGTGGAACTTT-CGTTTC---T....................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................TTAATAGCTTTAA-CAACTGA.............................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TAGCTTTAA-CAACTGAGTGAAA.......................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................GTG---AA------TTTTAAGCTTGGA........................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AAAC-----------------TTTCTACTTTCATAATTG---T...............................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................TGTGCAGCACATGCAACCCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................CCAATCAATGAGCGCAGCTTC-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AACTTT-CGTTTC---TT---ACTT--TATATGATA.................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................CAACCCAATCAATGAGCGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................TAAGCTTGGAAGAG----------AGAAACGATCGAT.............................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TAT-------------------------CTATATATATATATA--T-------AT...................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGC---AACAAT------A---A---------CATCAACAATCTGCAACATATGCAATCCAATCAATGAGAGAG-------AAGCGAAA---------------------------AG----------AGAAGCAAAAA------AATATATATGGAATAAAAACTATGTTCAATAAGAATTTATTAATAGCTTTAA-CAACTGAGTGAAAC-----------------TTTCTACTTTCATAATTG---TT-T---ATT----------------------AAGAC-------------ACGCAGCACCTCT----TGTAGTGGAACTTTTCGTTTT---TG---ACTT--GA----------------T----AATACTTAT---------ATATA-------TATATACCTATATATATA---------AATT------------------A-TATAT------------GTAATAG--------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................ATATATATGGAATAAAAAC.....................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................................AATCCAATCAATGAGAGAG-------AAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................................................................................................................................CGCAGCACCTCT----TGTAGTG......................................................................................................................................................................................1911.001000010
.........AAT------A---A---------CATCAACAATCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................ATAGCTTTAA-CAACTGAGTGA.........................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................AAAAACTATGTTCAATAAGAATTTATT................................................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................TTT---TG---ACTT--GA----------------T----AATACTTAT---------.................................................................................................................2111.001100000
................................................................................................................................................................................................................AAAC-----------------TTTCTACTTTCATAATTG---T...............................................................................................................................................................................................................................................................2311.001100000
.............................................................ATCAATGAGAGAG-------AAGCGAAA---------------------------AG----------AGA.......................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....................................................................................CGAAA---------------------------AG----------AGAAGCAAAAA------AAT......................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
AAC---AACAA------CA---A---------TAACAACAATCTGCAACACATGCAACCCAATCAATGAGCGCAACTTGCAAACTGAGTG---AA------TTTTAATCATAAGAATATCA-----CAAGAAGAAAGAA---------------------AAAACTATGTTCAATAAGAATTTATTAATAGCTTTAA-CAACTGAGTGAAAC-----------------TTTCTACTTTCATAATTG---TT-T---ATT----------------------AAGAC-------------ACGCAGCACCTCT----TGTAGTCGAACTTT-CGTTTC---TT---ACTCCTAA----------------TAT--TATATATAC------------TTATATATATGT-----------------ATACAAA---T-----------------------AT------------GTAGTAG--------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
AAC---AACAA------CA---A---------TAACAACAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110

Generated: 05/18/2015 at 01:38 PM