ID:

dsi_18461

 Coordinate:

2r:10105393-10105588 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.2 -36.1 -36.0

Flybase annnotation

exon [2r_10105589_10106162_+]; CDS [2r_10105589_10105849_+]; exon [2r_10105098_10105392_+]; CDS [2r_10105098_10105392_+]; intron [2r_10105393_10105588_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACGAACTACATGCTAGGTGCCGTGCTTTCAGGCTCGAAATGAAGTTCAACTTGAAGATCTATTATGGCATTACAATCATCTAGATTTCTTGGGGTATTTTAAATTGAGATATGTGAATAACTCTAGGGATTTCCTCTATTGTTTATCTTTTGCATTTTTAAAGCTACCCTTTCTAATGATCTTAATTATTGCAGCTCAGCGGCAATGCTGATTTAAAGAACCTGTACGAGGGCCTCACCATGAC
**************************************************************......((((((((.(((((((...(((......)))..)))))))......))))))))..((((.((..(((((....(((((((((((((.((.((...((((((((...(((((.....)))))))))))))...)).))..))))))).)))))).......)))))..)).))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M023
head
...............................................................................................................................................................................................................................................................AATGCTGATTTAAAGAACCTG.................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0
..............................................................TGCTAGGTGCCGTGCTTTCA...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................AATGCTGATTTAAAGAA........................ 17 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................TGATTTGAAGAACCTGTACGAGGGCC.......... 26 1 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................CCTTTCTAATGATCTTAATTATTGCAG.................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................ATCTAGGTTTCTTGGGG...................................................................................................................................................... 17 1 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................AAAGAACCTGTACGAGGGC........... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TGCTGATTTAAAGAACCTGTACGAGGGC........... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................TATTATCGCCCTACAATCAT..................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0
..................................................................................................................................................................GTGTGAATAACTGTAGTGATT................................................................................................................. 21 3 4 0.25 1 0 0 0 1 0 0 0 0
.............................................................................................AAGTTCGACTTGAAGAGC......................................................................................................................................................................................... 18 2 8 0.13 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................AATAACTCTAGCGACTTCAT............................................................................................................. 20 3 9 0.11 1 0 0 1 0 0 0 0 0
........................................................................CGTGCTTTTAGGTTCGGAAT............................................................................................................................................................................................................ 20 3 9 0.11 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................AAGATGATTTAAAGAACC...................... 18 2 13 0.08 1 0 0 0 0 0 0 0 1
............................ACAGTAGGTGCCCAAGG........................................................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 1 0 0 0 0 0
...............................................................................TCAAGCTCGAAATGA.......................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

TCCACCGCCTGTGGGACCCTGTACGGTGTGTCCGCCACGGGTTCCTATTCCATGCTTGATGTACGATCCACGGCACGAAAGTCCGAGCTTTACTTCAAGTTGAACTTCTAGATAATACCGTAATGTTAGTAGATCTAAAGAACCCCATAAAATTTAACTCTATACACTTATTGAGATCCCTAAAGGAGATAACAAATAGAAAACGTAAAAATTTCGATGGGAAAGATTACTAGAATTAATAACGTCGAGTCGCCGTTACGACTAAATTTCTTGGACATGCTCCCGGAGTGGTACTG
**************************************************......((((((((.(((((((...(((......)))..)))))))......))))))))..((((.((..(((((....(((((((((((((.((.((...((((((((...(((((.....)))))))))))))...)).))..))))))).)))))).......)))))..)).))))...************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
...ACCGCTTGTTGGACCCTG................................................................................................................................................................................................................................................................................... 18 2 3 0.67 2 1 1 0 0 0 0
...ACCGCTTGTTGGACCCT.................................................................................................................................................................................................................................................................................... 17 2 16 0.56 9 8 1 0 0 0 0
.............................................................................................................................TTAGGAGATGTAAAGTACCCCAT.................................................................................................................................................... 23 3 2 0.50 1 0 0 1 0 0 0
...ACCGCTTGTTGGACCCTGA.................................................................................................................................................................................................................................................................................. 19 3 20 0.25 5 0 5 0 0 0 0
..............................................................................................................................................................................................................AAAAATTTCGTTGGGAATG....................................................................... 19 2 8 0.25 2 0 1 0 0 0 1
...........................................................................................AGTTCAGGTTGCACTTCTAGA........................................................................................................................................................................................ 21 3 5 0.20 1 0 0 0 1 0 0
...............................................................................................CGAGTTGCACTTCTAGAT....................................................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 1 0
...........................................................................CGAAAGGCCGAGCTTCAC........................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 1 0 0 0
...........................................................................................................................................................................................................................CGAAAGATTACTAGAGT............................................................ 17 2 19 0.11 2 0 0 1 0 1 0
............................................................................................TTTCAGGTTGCACTTCTAGA........................................................................................................................................................................................ 20 3 20 0.10 2 0 0 0 2 0 0
..................................................................................................................................................................................................................TTTTCGTTGGGAAAGTTTACT................................................................. 21 3 10 0.10 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................AAAGAATACTAGAAGCAATAA...................................................... 21 3 18 0.06 1 0 0 1 0 0 0
..........................AGTGTGCGCCACCGGTTCC........................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10105343-10105638 + dsi_18461 AGGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACGAACTAC-----------ATGCTAGGTGCCGTGC------------------T--------------------------TTCAGGCT------CGAAATGA------AGTTCAA----------------------------------------CTTGAAGATCT-------------------ATT-----------------------------------------ATG-------GC-----ATTACAATCATC------------TAGATTTCTTGGGGTATTTTAAATTGAGA---------TATGTGAATAACTCTAGGGATTTCCTCTATT--------------------GTTTAT------------------------------------------------------------------------------------------CTTTTGCATTTTTAAA--GCTA---------------CCCTT-TCTAATGATCTT---AATT-ATTGCAGCTCAGCGGCAATGCTGATTTAAAGAACCTGTACGAGGGCCTCACCATGAC
droSec2 scaffold_1:6960578-6960953 + AGGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACGAACTAC-----------ATGCTAGGTGCCGTGCTTTTGGGTATCTT-AAGGT--------------------------TTCGGGCT------CGAAAAGA------AGTTCAACAGGTTGAGATAGGAGTTTCGTAATTATTTGTTGCCAATACTTGAAGAT-------------------------------------------------------------------G-------AC-----ATTACAATCTTC------------TAGATTTCTTCGGGTATTTTAAATTGAGA---------TATGTGGATAACTCTAGGGAATTCTTCGATTCAAAGT-----------TTTATTAGCTATTTTA--------------------------------------------------------GACTTTATAGACAG-------------CATTAAGATTTTTAAA--GCTA---------------CCCTT-ACTAATGATCTT---AATT-ATTGCAGCTCAGCGGCAATGCTGATTTGAAGAACCTGTACGATGGCCTCACCATGAC
dm3 chr2R:9442137-9442581 + AGGTGGCGGACACACTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACAAACTATCTTATCTTAAGATTTAAG--------GTTTAAGGTATCTT-AAGGA--------------------------TTCAGACT------CGCAATGA------AGTTGCATATGTTGAGATAAGAATTTCGTAATTATTTGTTGCCAATACTTGAAAATCTTCATAGCATTTTAAGGTGTATTTTCCCGATCTTTCCATTTCTATCTGAGAGATAACAAACCCGATT-------GC-----ATTACATACATCTAATTGTACATATAGATTTGTTGGGGTATTTTAAATTGAGA---------TATTTGGATAACT-------------------------------------TGTTAGCCATTTTA--------------------------------------------------------GACTTAATAGATAGTTTAATCGTTTTGCATTAACATTCTTAAA--GCTA---------------CCCTT-ACTAATGATCTT---AATT-ATTGCAGCTCAGCGGCAATGCTGATTTGAAGAACCTGTACGAGGGCCTCACCATGAC
droEre2 scaffold_4845:16374089-16374508 - AAGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGACAAGGTACAAACTAC--------------------------------------TG-AAGGT--------------------------TTCGGTTT------CGAAATGA------AGTTCAACAGGTCGATATAAGACTTTCGTAATTATTAGTTGCCAATACTTAGAGGTCTTCATCATATTTTGAGGTGTATTTTCCCGAGGTTTCCTTTTCA-----------------------------------------------------------------------------GTTTTGAATTGAGAATAGCTTCATATTAGTATAACTTTAGGGATTTCTTCTATTCAAAGATATCTGTCCTGTTTGTTAGCTATCTTAACCTTATGGCCGATTTTTGTAGAAAATGTATGAAATTTATGGCGTTACATTTTGACGACTTTA-----------------------------TTTTAAG--G------------------CCCTC-ACTAAAGATCTT---ATTT-ATTGCAGCTGAGCGGCAACGCTGATTTGAAGAACCTGTACGAGGGCCTCAGCATGAC
droYak3 2R:7509957-7510048 - C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTAAA--GCTA---------------CCCCT-ACTAAAGATCTT---AATT-ATTACAGCTCAGCGGCAACGCTGATTTGAAGAACCTGTACGAGGGACTCAGCATGAC
droEug1 scf7180000409758:279606-279823 - AGGTGGCGGACACTCTAGGACATGCCACGCAGGCGGTGCCCAAAGATAAGGTAC--------------------------------------------------------------------------TTTGTTTTTGTATAGGATTCAAATTAGAATTCGAATTGGT----------------------------------------CCAG--TTTAG-------------------ATG-----------------------------------------TAGTTAGCATGCCAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGTTCAAGGGGATA---------------CAGGGGATTA---ATCTT-AAATTT-ATTACAGTTAAGCGGCAATGCTGATTTGAAGAATTTGTACGAGGGTCTTACCATGAC
droBia1 scf7180000302291:727126-727184 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTTACAGCTCAACGGCAACGCTGATTTGAAGAACCTGTACGAGGGCCTAACCATGAC
droTak1 scf7180000415379:623341-623435 + TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTTTCAAA--GATA---------------CCCTTTATTA---ATCTC-CAACTTGTTTACAGCTCAGCGGCAACGCTGACTTGAAGAACCTATACGAGGGCCTTACCATGAC
droEle1 scf7180000487585:676-765 + TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAA--TATA---------------CCCTT-ACTCAATTTCTC---AAAT-ATTTCAGCTTAGCGGCAATGCTGATTTAAAGAACCTGTACGAGGGCCTCACCATGAC
droRho1 scf7180000762048:171-259 - ATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAA--AATA---------------CCC-A-ACTAACCAT----TAATTT-ATTACAGCTTAGCGGGAATGCTGATTTGAAGAACCTTTACGAGGGCCTCACCATGAC
droFic1 scf7180000454039:258018-258234 + AGGTGGCCGACACACTGGGACACGCCACGCAGGCGGTGCCCAAGGATAAGGTGGG----------------------------------------TAACCAAAAGGATTAACAGCT------GCTGACACAGTTTCATTAT------CAAACCAA------AATTGTT----------------------------------------CCTGAATTTAT-------------------ATC-----------------------------------------AAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAT--TGCA---------------CACTTTATTGATTTTCTT--CATTA-ATTACAGCTCAGTGGAAATGCCGATCTGAAGAATCTATACGAGGGACTCACCATGAC
droKik1 scf7180000302638:237996-238196 - AGGTGGCGGACACCCTGGGCCATGCCACGCAAGCGGTGCCCAAGGATAAGGTGGGAATAAA--------------------------------------GAGCAAAATCAACAGCTTAGTTATCTGAGACCATTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CTTCAA--TTTATTTACATATAAACAACCT-A-ATTTATTTG----CAATTC-TTTACAGCTAAGCGGCAACGCTGACCTGAAGAATTTGTACGAGGGCCTCAGCATGAC
droAna3 scaffold_13266:16737868-16737969 + TCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTTAA--ATTACTTATAATTA-----------AATAATAATCGCAATACCT-TTTACAGCTCAGTGGCAATGCTGATTTGAAGAACCTTTACGAGGGTCTCAGCATGAC
droBip1 scf7180000396384:845471-845533 + TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-ATTGCAGCTCACTGGAAATGCTGACCTGAAGAACCTCTACGAGGGTCTGAGCATGAC
dp5 3:8280517-8280572 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGCTGAGTGACAATGCTGATCTGAAGAGCCTGTACGAGGGTCTCACCATGAC
droPer2 scaffold_4:2162585-2162640 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGCTGGGTGACAATGCTGATCTGAAGAGCCTGTACGAGGGTCTCACCATGAC
droWil2 scf2_1100000004514:3787701-3787793 + CAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAA--ATCT-----------TGAACAC-G-TCTAATCTG----TATAAT-TTTCTAGCTCGCTGATAATCCTGATCTGAAGAACCTCTTTGAAGGACTCTCGATGAC
droVir3 scaffold_13324:2636608-2636659 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAAACGGCAATGCCGATCTGAAGAACTTATACGAGGGACTAACAATGAC
droMoj3 scaffold_6496:26235776-26235841 - TGGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-CTCTTAGCTCAACGACAATTCCGATCTGAAGAATCTGTTTGAAGGCTTAAGTATGAC
droGri2 scaffold_15112:4889457-4889526 + AGGTGGCCGATACACTAGGCCACGCAACGCAAGCAGTCCCCAAGGATAAGGTATGCCATAC-----------ATATTGTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACGAACTAC-----------ATGCTAGGTGCCGTGC------------------T--------------------------TTCAGGCT------CGAAATGA------AGTTCAA----------------------------------------CTTGAAGATCT-------------------ATT-----------------------------------------ATG-------GC-----ATTACAATCATC------------TAGATTTCTTGGGGTATTTTAAATTGAGA---------TATGTGAATAACTCTAGGGATTTCCTCTATT--------------------GTTTAT------------------------------------------------------------------------------------------CTTTTGCATTTTTAAA--GCTA---------------CCCTT-TCTAATGATCTT---AATT-ATTGCAGCTCAGCGGCAATGCTGATTTAAAGAACCTGTACGAGGGCCTCACCATGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTGATTTAAAGAACCTG....................2111.00100000000100000000
.........................................................................TGCTAGGTGCCGTGC------------------T--------------------------TTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTGATTTAAAGAA........................1711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTT-TCTAATGATCTT---AATT-ATTGCAG..................................................2711.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAACCTGTACGAGGGC...........1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGATTTAAAGAACCTGTACGAGGGC...........2811.00100000010000000000
droSec2
AGGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACGAACTAC-----------ATGCTAGGTGCCGTGCTTTTGGGTATCTT-AAGGT--------------------------TTCGGGCT------CGAAAAGA------AGTTCAACAGGTTGAGATAGGAGTTTCGTAATTATTTGTTGCCAATACTTGAAGAT-------------------------------------------------------------------G-------AC-----ATTACAATCTTC------------TAGATTTCTTCGGGTATTTTAAATTGAGA---------TATGTGGATAACTCTAGGGAATTCTTCGATTCAAAGT-----------TTTATTAGCTATTTTA--------------------------------------------------------GACTTTATAGACAG-------------CATTAAGATTTTTAAA--GCTA---------------CCCTT-ACTAATGATCTT---AATT-ATTGCAGCTCAGCGGCAATGCTGATTTGAAGAACCTGTACGATGGCCTCACCATGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....GGCGGACACCCTGGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAAGAACCTGTACGA...............1911.0011000
......................................................................................................................................................................................................GTTGCCAATACTTGAAGAT-------------------------------------------------------------------G-------AC-----ATT......................................................................................................................................................................................................................................................................................................................................2511.0011000
.......GGACACCCTGGGACATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAACCTGTACGATGGC...........2111.0010100
dm3
AGGTGGCGGACACACTGGGACATGCCACACAGGCGGTGCCCAAGGATAAGGTACAAACTATCTTATCTTAAGATTTAAG--------GTTTAAGGTATCTT-AAGGA--------------------------TTCAGACT------CGCAATGA------AGTTGCATATGTTGAGATAAGAATTTCGTAATTATTTGTTGCCAATACTTGAAAATCTTCATAGCATTTTAAGGTGTATTTTCCCGATCTTTCCATTTCTATCTGAGAGATAACAAACCCGATT-------GC-----ATTACATACATCTAATTGTACATATAGATTTGTTGGGGTATTTTAAATTGAGA---------TATTTGGATAACT-------------------------------------TGTTAGCCATTTTA--------------------------------------------------------GACTTAATAGATAGTTTAATCGTTTTGCATTAACATTCTTAAA--GCTA---------------CCCTT-ACTAATGATCTT---AATT-ATTGCAGCTCAGCGGCAATGCTGATTTGAAGAACCTGTACGAGGGCCTCACCATGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........CACACTGGGACATGCCACACAGGCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000001000200000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................TGCCACACAGGCGGTGCCCAAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAAGAACCTGTACGAGG.............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGGTGGCGGACACACTGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
.........................................................................................................................................................................................................................................................................................................................................................ATTGAGA---------TATTTGGATAACT-------------------------------------T........................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAAGAACCTGTACGAGGG............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACCTGTACGAGGGC...........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAACCTGTACGAGGGCCTCAC......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGATAGTTTAATCGTTTGT........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTGGGACATGCCACACAGGCGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGATCTT---AATT-ATTGCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAAGAACCTGTACGAGGGCC..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACACAGGCGGTGCCCAAGGATAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAACCTGTACGAGGGC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....GGCGGACACACTGGGACATGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGTGCCCAAGGATAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGGATAACT-------------------------------------TGTTAGCCAT...............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACCTGTACGAGGGCCT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGGTGGCGGACACACTGGGACATGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTGAAGAACCTGTACGA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTGATTTGAAGAACC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACACAGGCGGTGCCCAAGGATAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CACACTGGGACATGCCACACAGGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACTGGGACATGCCACACAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTTGAAGAACCTG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACTGGGACATGCCACACAGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACCTGTACGAGGGCCTC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTGGGACATGCCACACAGGCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...TGGCGGACACACTGGGACATGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAAGAACCTGTACGA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAATGCTGATTTGAAGAACC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......CGGACACACTGGGACATGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGGTGGCGGACACACTGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAATAGATAGTTTAATCGTTA..........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTGAAGAACCTGTACGAGGGC...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAACCTGTACGAGGGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTTGAAGAACCTGT...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGCGGACACACTGGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACTGGGACATGCCACACAGGCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAACCTGTACGAGGGCC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TCAGACT------CGCAATGA------AGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGTGGCGGACACACTGGGACATGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCACACAGGCGGTGCCCAAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......CGGACACACTGGGACATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACTGGGACATGCCACACAGGCGGTGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................C-----ATTACATACATCTAATTGT......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............CACTGGGACATGCCACACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACACAGGCGGTGCCCAAGGATAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................CACACAGGCGGTGCCCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGTACGAGGGCCTCACCATGA.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCTT---AATT-ATTGCAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGTGGCGGACACCCTGGGACATGCCACACAGGCGGTGCCCAAGGACAAGGTACAAACTAC--------------------------------------TG-AAGGT--------------------------TTCGGTTT------CGAAATGA------AGTTCAACAGGTCGATATAAGACTTTCGTAATTATTAGTTGCCAATACTTAGAGGTCTTCATCATATTTTGAGGTGTATTTTCCCGAGGTTTCCTTTTCA-----------------------------------------------------------------------------GTTTTGAATTGAGAATAGCTTCATATTAGTATAACTTTAGGGATTTCTTCTATTCAAAGATATCTGTCCTGTTTGTTAGCTATCTTAACCTTATGGCCGATTTTTGTAGAAAATGTATGAAATTTATGGCGTTACATTTTGACGACTTTA-----------------------------TTTTAAG--G------------------CCCTC-ACTAAAGATCTT---ATTT-ATTGCAGCTGAGCGGCAACGCTGATTTGAAGAACCTGTACGAGGGCCTCAGCATGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................TACTTAGAGGTCTTCATCAT..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACCTGTACGAGGGCCT.........2011.0011000000
........................................CAAGGACAAGGTACAAACTAC--------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAACCTGTACGAGGGCCT.........2411.0010001000
droYak3
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTAAA--GCTA---------------CCCCT-ACTAAAGATCTT---AATT-ATTACAGCTCAGCGGCAACGCTGATTTGAAGAACCTGTACGAGGGACTCAGCATGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAAGAACCTGTACGAGGGA...........2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCT-ACTAAAGATCTT---AATT-ATTACAG..................................................2711.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGGGACTCAGCATGA.2011.00101000000000
droEug1
AGGTGGCGGACACTCTAGGACATGCCACGCAGGCGGTGCCCAAAGATAAGGTAC--------------------------------------------------------------------------TTTGTTTTTGTATAGGATTCAAATTAGAATTCGAATTGGT----------------------------------------CCAG--TTTAG-------------------ATG-----------------------------------------TAGTTAGCATGCCAAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAGTTCAAGGGGATA---------------CAGGGGATTA---ATCTT-AAATTT-ATTACAGTTAAGCGGCAATGCTGATTTGAAGAATTTGTACGAGGGTCTTACCATGACSizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTTACAGCTCAACGGCAACGCTGATTTGAAGAACCTGTACGAGGGCCTAACCATGACSizeHit CountTotal NormTotal
No Reads
droTak1
TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTTTCAAA--GATA---------------CCCTTTATTA---ATCTC-CAACTTGTTTACAGCTCAGCGGCAACGCTGACTTGAAGAACCTATACGAGGGCCTTACCATGACSizeHit CountTotal NormTotal
No Reads
droEle1
TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAA--TATA---------------CCCTT-ACTCAATTTCTC---AAAT-ATTTCAGCTTAGCGGCAATGCTGATTTAAAGAACCTGTACGAGGGCCTCACCATGACSizeHit CountTotal NormTotal
No Reads
droRho1
ATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGAA--AATA---------------CCC-A-ACTAACCAT----TAATTT-ATTACAGCTTAGCGGGAATGCTGATTTGAAGAACCTTTACGAGGGCCTCACCATGACSizeHit CountTotal NormTotal
No Reads
droFic1
AGGTGGCCGACACACTGGGACACGCCACGCAGGCGGTGCCCAAGGATAAGGTGGG----------------------------------------TAACCAAAAGGATTAACAGCT------GCTGACACAGTTTCATTAT------CAAACCAA------AATTGTT----------------------------------------CCTGAATTTAT-------------------ATC-----------------------------------------AAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAT--TGCA---------------CACTTTATTGATTTTCTT--CATTA-ATTACAGCTCAGTGGAAATGCCGATCTGAAGAATCTATACGAGGGACTCACCATGACSizeHit CountTotal NormTotal
No Reads
droKik1
AGGTGGCGGACACCCTGGGCCATGCCACGCAAGCGGTGCCCAAGGATAAGGTGGGAATAAA--------------------------------------GAGCAAAATCAACAGCTTAGTTATCTGAGACCATTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-CTTCAA--TTTATTTACATATAAACAACCT-A-ATTTATTTG----CAATTC-TTTACAGCTAAGCGGCAACGCTGACCTGAAGAATTTGTACGAGGGCCTCAGCATGACSizeHit CountTotal NormTotal
No Reads
droAna3
TCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTTAA--ATTACTTATAATTA-----------AATAATAATCGCAATACCT-TTTACAGCTCAGTGGCAATGCTGATTTGAAGAACCTTTACGAGGGTCTCAGCATGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAAGAACCTTTACGAGGGT...........2311.001000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGATTTGAAGAACCTT....................2011.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAAGAACCTTTACGAGGGTCTC........2611.001010000
droBip1
TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT-ATTGCAGCTCACTGGAAATGCTGACCTGAAGAACCTCTACGAGGGTCTGAGCATGACSizeHit CountTotal NormTotal
No Reads
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGCTGAGTGACAATGCTGATCTGAAGAGCCTGTACGAGGGTCTCACCATGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGCTGATCTGAAGAGC.......................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGCTGATCTGAAGAGCCT.....................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGGGTCTCACCATGA.1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAATGCTGATCTGAAGAGCCT.....................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGCTGATCTGAAGAGCCT.....................2311.0010100000000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGCTGGGTGACAATGCTGATCTGAAGAGCCTGTACGAGGGTCTCACCATGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTGATCTGAAGAGCCT.....................2014.004400000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGCTGATCTGAAGAGC.......................2112.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCTGATCTGAAGAGCCT.....................2112.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGCTGATCTGAAGAGCCTGTA..................2611.001100000
droWil2
CAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAA--ATCT-----------TGAACAC-G-TCTAATCTG----TATAAT-TTTCTAGCTCGCTGATAATCCTGATCTGAAGAACCTCTTTGAAGGACTCTCGATGACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGAACCTCTTTGAAGG............2121.50320100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAATCCTGATCTGAAGA.........................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTGATAATCCTGATCTG.............................2111.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCCTGATCTGAAGAACCT.....................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGATAATCCTGATCTGAAGAAC.......................2511.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAGGACTCTCGATGAC2120.50100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAACCTCTTTGAAGGA...........2020.50100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCTTTGAAGGACTCTCGA....2120.50100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGAAGGACTCTCGATGA.2120.50100100
droVir3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAAACGGCAATGCCGATCTGAAGAACTTATACGAGGGACTAACAATGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAATGCCGATCTGAAGAACT......................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTTATACGAGGGACTAACAAT...2611.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGAACTTATACGAGGGAC..........2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTATACGAGGGACT.........1811.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACGAGGGACTAACA.....1811.001010000000000000000000000000000000000000000000000000000000000000
droMoj3
TGGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-CTCTTAGCTCAACGACAATTCCGATCTGAAGAATCTGTTTGAAGGCTTAAGTATGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGGTGGCCGATACACTAGGCCACGCAACGCAAGCAGTCCCCAAGGATAAGGTATGCCATAC-----------ATATTGTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:42 PM