ID:dsi_18380 |
Coordinate:3r:10172235-10172300 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10171994_10172234_-]; CDS [3r_10171994_10172234_-]; CDS [3r_10172301_10172495_-]; exon [3r_10172301_10172495_-]; intron [3r_10172235_10172300_-]
No Repeatable elements found
| ##################################################------------------------------------------------------------------################################################## AAAGGATCCTTGGCCTATATCCTCAACTTGGCCGGTGATGGCAATGCCGAGTAAGGCCATATTCATTCGAATTTAAGCATTGAACAAAAATGTCTATTTATTTACTTCTCTTTTAGAACCTCCATTACAAACTTTTCAATCCTCATTTCGTTTCGATTGAGATCCG **************************************************(((((...(((..((((....(((((...)))))....))))..)))...)))))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
M025 embryo |
M053 female body |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................TTAGAACCTCCATTACAAAC.................................. | 20 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 |
| .................TCACCTCAACTTGGCCCGTGAT............................................................................................................................... | 22 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ................ATATCCTCAACTTGGCCGGTGATGG............................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................CTCATTTCGTTTCGATTGA...... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............CTATATCCTCAACTTGGACGGTGATGGC............................................................................................................................ | 28 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................................................................CTCCATTACAAACTTTTCAATCCTCA..................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| .................TGTCCTCACCTTGGCCGCTGA................................................................................................................................ | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 |
|
TTTCCTAGGAACCGGATATAGGAGTTGAACCGGCCACTACCGTTACGGCTCATTCCGGTATAAGTAAGCTTAAATTCGTAACTTGTTTTTACAGATAAATAAATGAAGAGAAAATCTTGGAGGTAATGTTTGAAAAGTTAGGAGTAAAGCAAAGCTAACTCTAGGC
**************************************************(((((...(((..((((....(((((...)))))....))))..)))...)))))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M023 head |
M025 embryo |
SRR618934 dsim w501 ovaries |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................AAAAGTTAGGAGTAAATC................ | 18 | 1 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................GGAGGTGATGTTTGAAAAGTTAGGAGT..................... | 27 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................TGAACAGTTAGGAATAATGC................ | 20 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................................................................................TAGTTAGGAGTAAAGC................ | 16 | 1 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................................................................................................AGTTAGGAGTAATGC................ | 15 | 1 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................TTTTTTGAAAAGTTAGGAG...................... | 19 | 2 | 8 | 0.13 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................GGTAATGTTTGCAATGTT........................... | 18 | 2 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................AATAGTTAGGAGTAAATC................ | 18 | 2 | 15 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................GAGTAGTTAGGAGTAAATC................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ......AGTAAGCGGATATAGAAGT............................................................................................................................................. | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:35 AM