ID:

dsi_18374

 Coordinate:

3r:27054185-27054376 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTCCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCCAATCTCACATTACATTAAACATGCCGGCAATATTCTCTCGTCCGCACTTCCTGCTTTCCTTTCCATTTCCTTTGCCTTCCGGGGACCTCTACTTAAACATTTGTATGCTTTCCATTAATAAATAGTAAATTAAGCGCATAAATGCGAAAATCATGCAAATCTGCTGGAACTCTATTGCAGAAAGTCAACAAGTGGGGCAAAATGCTAAAATGTAAATGTAGCCAACGAAC
**************************************************(((.(((((..................))))).)))..((((((........((((((.....(((.....((((....(((((........)))))............(((((((.(((((.....................))))).))))))).)))).....)))....))).)))....))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 GSM343915
embryo
.............................................................................................................................................................................................................................TCTGCTGGAACTCTATTGCAGAAAGTCAA.......................................... 29 0 1 3.00 3 3 0 0 0 0 0
.........TACACAAATCAGAATTTGAACCGGTT................................................................................................................................................................................................................................................................. 26 0 1 2.00 2 0 2 0 0 0 0
.............................................................................................................................................................................................................................TCTGCTGGAACTCTATTGCAGAAAGT............................................. 26 0 1 1.00 1 1 0 0 0 0 0
.....................................TATTGAAGTTAAGGT................................................................................................................................................................................................................................................ 15 1 16 1.00 16 0 16 0 0 0 0
.............................................................................................................................................................................................................................................TGCAGAAAGTCAACAAGTGGGGCAAA............................. 26 0 1 1.00 1 1 0 0 0 0 0
...........CACAAATCAGAATTTGAACCGGTT................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0
.....TCATTACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................TCTGCTGGAACTCTATTGCAGAAAGTC............................................ 27 0 1 1.00 1 1 0 0 0 0 0
................ATCAGAATTTGAACCGGTTAATATTGGAGT...................................................................................................................................................................................................................................................... 30 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................................TCGATTGCAGAAACTCAACAA....................................... 21 2 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................................................................................................TGCAGAAAGTCAACAAGTGGGGCAAAA............................ 27 0 1 1.00 1 1 0 0 0 0 0
.......................TTTGAACCGGTTAATATTGGAGTTAA................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................TGGAACTCTATTGCAGAAAGTCAAC......................................... 25 0 1 1.00 1 0 1 0 0 0 0
................ATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0
....TTCATTACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................. 30 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................CGGGGACCTGTACGTAAGC.................................................................................................................................... 19 3 3 0.33 1 0 0 0 0 1 0
....................................ATATTGTAGGTAGGGTAAGTT........................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1
..........................AAACCGGTTAATATT........................................................................................................................................................................................................................................................... 15 1 18 0.06 1 0 0 0 1 0 0
.........................TGAACCGTTTAATGTTG.......................................................................................................................................................................................................................................................... 17 2 19 0.05 1 0 0 0 1 0 0
.....................................................................................................................................................................................AAAAAGTAAATTAGGCGGAT........................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

AAGGAAGTAATGTGTTTAGTCTTAAACTTGGCCAATTATAACCTCAATTCCATTCAAATAGGTTAGAGTGTAATGTAATTTGTACGGCCGTTATAAGAGAGCAGGCGTGAAGGACGAAAGGAAAGGTAAAGGAAACGGAAGGCCCCTGGAGATGAATTTGTAAACATACGAAAGGTAATTATTTATCATTTAATTCGCGTATTTACGCTTTTAGTACGTTTAGACGACCTTGAGATAACGTCTTTCAGTTGTTCACCCCGTTTTACGATTTTACATTTACATCGGTTGCTTG
**************************************************(((.(((((..................))))).)))..((((((........((((((.....(((.....((((....(((((........)))))............(((((((.(((((.....................))))).))))))).)))).....)))....))).)))....))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
..................GTCTTAAACTTGGCCACT................................................................................................................................................................................................................................................................ 18 1 1 1.00 1 1 0 0 0
...........GTGTTTAGTCTTAAACCGGGC.................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0
............................................................................................................................................GGCCCCTGGAGATCAC........................................................................................................................................ 16 2 11 0.27 3 1 0 2 0
....AAAGAATGTGTTTAGACTTAAA.......................................................................................................................................................................................................................................................................... 22 3 6 0.17 1 0 0 1 0
..........................................................................................................................................AAGGCCCCTGGAGAG........................................................................................................................................... 15 1 7 0.14 1 0 0 0 1
........................................................................................................................................CCAAGGCCCCTGGAGA............................................................................................................................................ 16 2 16 0.06 1 0 0 0 1
...........................................................................................................................................TGGCCCCTGGAGATCA......................................................................................................................................... 16 2 20 0.05 1 1 0 0 0
.................................................................................................................................AGGAACCGGAATGCCC................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0
...........................................................................................................................................AGGCCTCTGGAGTAGAAT....................................................................................................................................... 18 3 20 0.05 1 0 1 0 0
.............................................................................................CAATAGAGCAGGCGT........................................................................................................................................................................................ 15 2 20 0.05 1 1 0 0 0
....................................................................................................................AAAGGAAAGGTAAAGCAT.............................................................................................................................................................. 18 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:27054135-27054426 - dsi_18374 TTCCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AAC
droSec2 scaffold_31:440878-441169 - TTCCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATATTCTC-TCG-----------TGCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-C-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AAC
dm3 chr3R:27784515-27784806 - TTTCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ATTT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGT--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCTCTTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATACTA-AAATGTAAATGTAGCCGA---CG-AAG
droEre2 scaffold_4820:168289-168580 + TTCCTTCAATACACAAATCAGAATTTGCACCGGTTCACATCGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAACATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCGATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AAG
droYak3 3R:28717143-28717434 - TTCCTTCAATACACAAATCAGAATTTGCACCGGTTCACATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAACATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-A-A--------------ACA-----TTGGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCGATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AAG
droEug1 scf7180000409488:117769-118066 + TTCCTTCACTACACAAATCAGAGTTTCAACCGATTCATATTGGAGTCAAGGTAAGTTAATCC-AATCTACC--------------------G---------TTACA-----TTATCCATTCCAGCAATTTACTC-TCG-----------ACCTGACTTCCTGCTT------------C------------CC-TTCCCTTCCCTTCCTTCACTTCCG----TTCTCTGTCC---------------CTCC------------------------GCTT-T-G--------------AAA-----TTTGTTTGCTT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTCC---------TGGA-------------ACCCGATGG-CA---G---TAAGTCAACAAGTAGG-------------------GCA------AAATGCT--AAATGTAAATGTTTCCAG---CC-AAC
droBia1 scf7180000301591:125382-125678 + TTCCTTCAATACACAAGTCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AACTCCTC--------------------A---------TTACA-----TTATCCATTCCAGGCTGCTTCCG-TCG-----------ACCGCACTTCCTGCTT------------T------------CC-CATCCTCTCCCCCTTTCCGTTCCC----TTGCCAGTCT---------------CTCC------------------------ACTT-A-A--------------ACA-----TTTGTTTGCAT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------T-GA-------------ACCCGATGG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCAA---CC-AAC
droTak1 scf7180000415712:901951-902261 - TTCCTTCAATACACAAACCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AATCTCTCA--TT---------------ATTA----CATTACA-----TTATCCATCCCAGCCATTTT--C-TCG-----------ACCGCACTTCCCGATA------------T------------CC-CTTCCACTTCC-ATTTCCTTTTCC----ATCCTCAGTCTCTCGT-CT------CTCG------------------------ACTT-G-A--------------ACA-----TTTGTTTGCTT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACCCGATGG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCAA---CG-AAC
droEle1 scf7180000491196:143442-143724 - TACCTTCAATACACAAAACAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTAATCC-AATCTTTC--------------------A---------TTACA-----TCATCCCCTCCAGCCATCTACTCTTCG-----------GAAGTACTTCCTGCTA------------T------------CC-CTTTG-------CTATCCTTCTCT----ATTC-----C---------------CTCC------------------------ACTT-G-A--------------ACA-----TTTGTTTGCTT--ACCATTATTAAATAGTAAA-TTAAGCCC--TTAAATGTGAAAATCATCCAAATCTGC---------TGGA-------------ACCCGATGG-CA---A---AATGTCAACAAGTGAG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCA--------AC
droRho1 scf7180000778323:115725-116006 - TTCCTTCTATACACAAATCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AATCTTTC--------------------A---------TTACA-----TTATCCATTCCAGCCATATACTGTTCG-----------ACCGTTCTTCCTGCTT------------T------------CC-TTTTG-------CTTTCCGTTTCA----CTC------C---------------CGCC------------------------ACTT-A-A--------------ACA-----TGTGTTTGCTT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATTCGC---------TGGA-------------ACCCGATGG-CA---A---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCA--------AC
droFic1 scf7180000454097:224915-225183 - TTTCTTCAATACACAAGTCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AACCACTC--------------------A---------TTACA-----TTTTCCATTTCATCAGTCTACTCCCCG-----------ACATAACTTCCTGTTT------------A------------CCCTTTCC-------CTGTCCTTT-----------------------------------C------------------------AATT-G-C--------------ACA-----TTTGTTTGCTT--GTCAT-GTTAAATAGTAAA-TTAAGAAC--ACTAATGAGAAAATCATGCAAATCTGC---------TCGA-------------AACCGATAA-CA---A---AAAGTCAACAAGTCTG-------------------GCT---------------AAATGTAAATGTAGCTTG---CC-AAC
droKik1 scf7180000302475:2062939-2063238 + TTCCTTCAATACACAAAACAGAATTTGCACCGGTTCACATTGGAGTAAAGGTAAGTTGATACTGAACGCTT--------------------A---------TTACA-----TTTAAC----------CATTATC-CAT-----------TATGCCTTGCCTGCTAAATGTACATATATCCTTTTTATAAACCCA---------------------------C-C-------TACAGTCCT------CCCC------------------------ATTT-A-A--------------ACA-----TTTGTTTGCTT--CCTATTATTTAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCGACGGGATG---TGGA-------------ACCCGCTGG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCAGTC-AA-AAC
droAna3 scaffold_13340:149088-149315 + TTCCGTCAATACACAAACCAGAATTCGCATCGGTTCACATTGGAGTTAAGGTGAGT-GATCC-AATCTCGTT--GTAAGACGTGGGTG-----------------------------CCTC----------C------------------------------------------------------------------------------------------------------------------------------------ACATGCCCCAG-CCCCTTCATCGGC-------A-A-----TAAGTCTGC----TTTATTATCT--------ATTGTGCCGC--ATTAATGCGGAAATAATGCAAATTCAC---------T------------------CCAATGC-CA---G---GACGATCAAAATTGGG-------------------GCA------AACTTGT---AATGTAAATTCAACCGA------AAG
droBip1 scf7180000394085:804327-804550 - TACCGTCAATACACAAACCAGAGTTCTCATCGGTGCACATTGGAGTTAAGGTGAGT-GATCC-AATCTCTCTCGGGGGGACATGGGTG------------------------------------TAGTG----------------------------------------------------------------------------------------------------------------------------------------------CCAG-CC-CTTCGTCGGCAATAAGAACG-------------C----TTTATTATCT--------GTTGTGGCGC--ATTAATGCGGAAATAATGCAAATCCAT---------TCCA-------------AGGCCA---------GCCTGA----AGAAATTGGG-------------------GCG------AGATTGTATAAATGTAAATCCAAGCG-----A-AAG
droPer2 scaffold_0:5292469-5292768 + TTCCTTCACTACACAAAACAGAATTTGCATCGGTTCATATTGGAGTTAAGGTAAGTCTCTAT-CATGTCAC--------------------A---------CCCC----------CCCT----------------CCC-----------TTCGCTTCCC-------------TTCCTTCCCTTTCCTAACT--------------CTTACTCT----GAAAT-C-------TATCATCCTGTGATCCTTT------------------------ATTC-G-A--------------ACTCTTTTTCTGTTTGCTCGCTCGATTATTAAATAGTAAA-TTAAGCGAAAACAAATGCGAAAATCATGCAAAT-------------------------------------GG-CA---A---AAAGTCAACAAGTGGGGGGGGGCGTGGGTGATGGGGCA-----CAAATGCT--AAATGTAAATGTTGCCAGCAACA-AAC
droWil2 scf2_1100000004902:10360297-10360603 - TATCTTCAATACATAAATCAGAATTCACACCGGTTCACATTGGAGTTAAGGTAAGGTAA-CA-AAGCTG-------------------------------------TAAATCTAAAGAGG----CAAACTTTAC-AAACGCGCCGCTCCTC----TGTGCTGTGT------------A------------GC-----T-------ATTACTTAAGC-------------------------------GGT-----------ATTT-------AAG-GGGC-A--------------ACA-----TTTGTG----T--TCTATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGTAAATCGGCAA-ATCTGCTCAACGACAACCATCCGACCCAATGG-CAAGAG---AAAGTCAACAAGTGTT-------------------GCAAGCGTCAAATGCT--AAATGTAAATGTTGCCAA---CAAAAC
droVir3 scaffold_13047:15001273-15001513 - dvi_16985 TACCTTCAATACATAAAACTGAATTCACACCGGTTCACATTGGAGTCAAGGTGAGTTCTACT-AAGCTCT-------------------------------TTAAATAATCCTAATGATGC----------T------------------------------------------------------------------------------------------------------------------------------------ACGAGCGCAAA-GCGC-AAATCGG-------GACA-----CTCGT-TGC----CCCATTATGAAATAGTAAA-TTAAGCGT--ATAAATGCGAATATCATGCAAATCG------------CGA-------------CCTCCGTGGCCA---A---AAAGTCAACAAGTGGG-------------------GCA------AAATGTT--ATATGTAAATGTTGCCGC---TA-AAC
droMoj3 scaffold_6540:18452923-18453195 - TACCTTCAATACATAAAACTGAATTCACACCGGTTCACATTGGAGTCAAGGTGAGTCTCTT------------------------------ACTAAGCT--C----TATCTC-------------------------T-----------TCTCT---------------------------------------------------CTTACTCA----CACAC-A-------CACACA------CACCTTTATCCCAATAATATTTCGAGTGCGAA-ACAT-AGGCCTT-------TGCG-------CAT-TGC----CTCATTATATAATAGTAAA-TTAAGCTC--ATAAATGCGAATATCATGCAAATCG------------CGA-------------CCTCCGTGGCCA---A---AAAGTCAACAAGTGGA-------------------GCA------AAATGCT--ATATGTAAATGTTGCCGC---TGCCAC
droGri2 scaffold_14830:4988769-4989020 + TAAATTCAATAATAAAAACTGAATTCTCACCGGTTCACATTGGAGTTAAGGTGAGTG-AGAT-GACGACGATGATGACGACGTCGACGTCGACAAAGCTCTCTAAATAAATCTAAT---------------------------------------------------------------------------------------------------------------------------------------------------A-------CAAA-GAGC-A--------------ACA-----CTCGT-TGC----CCCATTATGAAATAGTGAA-TTAAGCGC--ATAAATGCGAATATCATGCAAATCG------------CGA-------------TCCCCATGACCG---A---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCGC---TA-AAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTCCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................TCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGTCAA........................................................................2913.00300000000000003000
.........TACACAAATCAGAATTTGAACCGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGT...........................................................................2611.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AA..................................2611.00100000000000001000
...........CACAAATCAGAATTTGAACCGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.....TCATTACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGTC..........................................................................2711.00100000000000001000
................ATCAGAATTTGAACCGGTTAATATTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAA.................................2711.00100000000000001000
.......................TTTGAACCGGTTAATATTGGAGTTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGA-------------ACTCTATTG-CA---G---AAAGTCAAC.......................................................................2511.00100000010000000000
................ATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
....TTCATTACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
droSec2
TTCCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATATTCTC-TCG-----------TGCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-C-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCTATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................GTTAATATTGGAGTTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
TTTCTTCATTACACAAATCAGAATTTGAACCGGTTAATATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ATTT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGT--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCTCTTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATACTA-AAATGTAAATGTAGCCGA---CG-AAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........TACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000
.........TACACAAATCAGAATTTGAACCGGTTAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000030010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTGAACCGGTTAATATTGGAGTTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TCTTG-CA---G---AAAGTCAACAAGTGGG-------------------GC...........................................2613.0030000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGAACCGGTTAATATTGGAGTTAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCATTACACAAATCAGAATTTGAACCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TGCGAAAATCATGCAAATCTGC---------TGGA-------------...................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGC---------TGGA-------------ACTCTCTTG-CA---G---AAAGTCAACA......................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGAATTTGAACCGGTTAATATTGGAGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTGC---------TGGA-------------ACTCTCTTG-CA---G---AAAGTCAAC.......................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ATATTGGAGTTAAGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCAGAATTTGAACCGGTTAATATTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGAACCGGTTAATATTGGAGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAATCAGAATTTGAACCGGTTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TCTC-TCG-----------TCCGCACTTCCTGC................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTGAACCGGTTAATATTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAA..............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TACACAAATCAGAATTTGAACCGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCAC--------------------A---------TTACA-----TTAAACATGCCGGCAATA..................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TAAA-TTAAGCGT--ATAAATGCG...............................................................................................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TAGTAAA-TTAAGCGT--ATAAATGCGAAAA...........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TCTTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTGC---------TGGA-------------ACTCTCTTG-CA---G---AAAGTC..........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGAACCGGTTAATATTGGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGTTAATATTGGAGTTAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGC---------TGGA-------------ACTCTCTTG-CA---G---AAAGTC..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TATTCTC-TCG-----------TCCGCACTTCCTGCT...............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AACATGCCGGCAATATTCTC-TCG-----------TCCGCAC.......................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTTAATATTGGAGTTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CA---G---AAAGTCAACAAGTGGG-------------------GC...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......ATTACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGAACCGGTTAATATTGGAGTTAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CATGCAAATCTGC---------TGGA-------------ACTCTCTTG-.........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TACA-----TTAAACATGCCGGCAATATTC...............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCTTCATTACACAAATCAGAATTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACCGGTTAATATTGGAGTTAAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCATTACACAAATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCTTCATTACACAAATCAGAATTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATCAGAATTTGAACCGGTTAATATTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATTT-A-A--------------ACA-----TTTGTATGCTT--TCC...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAA.................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTACA-----TTAAACATGCCGGCA.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCATTACACAAATCAGAATTTGAACCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTACA-----TTAAACATGCCGGCAATATTC...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AATCAGAATTTGAACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTAATATTGGAGTTAAGGTAAGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TAATATTGGAGTTAAGGTAAGTTTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TAAGCGT--ATAAATGCGAAAATCATGCA....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........ACACAAATCAGAATTTGAACCGGTTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTACACAAATCAGAATTTGAACCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATAGTAAA-TTAAGCGT--ATAAATGCGAAAA...........................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAA....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ATATTGGAGTTAAGGTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGG.......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TACA-----TTAAACATGCCGGCAAT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TACA-----TTAAACATGCCGGCAATATT................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CATGCAAATCTGC---------TGGA-------------A..................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCAGAATTTGAACCGGTTAATATTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TGCGAAAATCATGCAAATCTGC---------TGGA-------------AC.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAAATCAGAATTTGAACCGGTTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TACA-----TTAAACATGCCGGCAATATTCTC-............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AAATACTA-AAATGTAAATGTAGCCG..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GGA-------------ACTCTCTTG-CA---G---AAAGTCAAC.......................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................TTGGAGTTAAGGTAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
droEre2
TTCCTTCAATACACAAATCAGAATTTGCACCGGTTCACATCGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAACATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-A-A--------------ACA-----TTTGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCGATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGG-------------------GCA------AAATGCT.............................1811.0011000000
.......AATACACAAATCAGAATTTGCACCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
droYak3
TTCCTTCAATACACAAATCAGAATTTGCACCGGTTCACATTGGAGTTAAGGTAAGTTTATCC-AATCTCAC--------------------A---------TTACA-----TTAAACATGCCGGCAACATTCTC-TCG-----------TCCGCACTTCCTGCTT------------T------------CC-TTTCC-------ATTTCCTTTGCC----TTCCGGGGAC---------------CTCT------------------------ACTT-A-A--------------ACA-----TTGGTATGCTT--TCCATTAATAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACTCGATTG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCTA-AAATGTAAATGTAGCCAA---CG-AAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TTCCTTCACTACACAAATCAGAGTTTCAACCGATTCATATTGGAGTCAAGGTAAGTTAATCC-AATCTACC--------------------G---------TTACA-----TTATCCATTCCAGCAATTTACTC-TCG-----------ACCTGACTTCCTGCTT------------C------------CC-TTCCCTTCCCTTCCTTCACTTCCG----TTCTCTGTCC---------------CTCC------------------------GCTT-T-G--------------AAA-----TTTGTTTGCTT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTCC---------TGGA-------------ACCCGATGG-CA---G---TAAGTCAACAAGTAGG-------------------GCA------AAATGCT--AAATGTAAATGTTTCCAG---CC-AACSizeHit CountTotal NormTotal
No Reads
droBia1
TTCCTTCAATACACAAGTCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AACTCCTC--------------------A---------TTACA-----TTATCCATTCCAGGCTGCTTCCG-TCG-----------ACCGCACTTCCTGCTT------------T------------CC-CATCCTCTCCCCCTTTCCGTTCCC----TTGCCAGTCT---------------CTCC------------------------ACTT-A-A--------------ACA-----TTTGTTTGCAT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------T-GA-------------ACCCGATGG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCAA---CC-AACSizeHit CountTotal NormTotal
No Reads
droTak1
TTCCTTCAATACACAAACCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AATCTCTCA--TT---------------ATTA----CATTACA-----TTATCCATCCCAGCCATTTT--C-TCG-----------ACCGCACTTCCCGATA------------T------------CC-CTTCCACTTCC-ATTTCCTTTTCC----ATCCTCAGTCTCTCGT-CT------CTCG------------------------ACTT-G-A--------------ACA-----TTTGTTTGCTT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCTGC---------TGGA-------------ACCCGATGG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCAA---CG-AACSizeHit CountTotal NormTotal
No Reads
droEle1
TACCTTCAATACACAAAACAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTAATCC-AATCTTTC--------------------A---------TTACA-----TCATCCCCTCCAGCCATCTACTCTTCG-----------GAAGTACTTCCTGCTA------------T------------CC-CTTTG-------CTATCCTTCTCT----ATTC-----C---------------CTCC------------------------ACTT-G-A--------------ACA-----TTTGTTTGCTT--ACCATTATTAAATAGTAAA-TTAAGCCC--TTAAATGTGAAAATCATCCAAATCTGC---------TGGA-------------ACCCGATGG-CA---A---AATGTCAACAAGTGAG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCA--------ACSizeHit CountTotal NormTotal
No Reads
droRho1
TTCCTTCTATACACAAATCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AATCTTTC--------------------A---------TTACA-----TTATCCATTCCAGCCATATACTGTTCG-----------ACCGTTCTTCCTGCTT------------T------------CC-TTTTG-------CTTTCCGTTTCA----CTC------C---------------CGCC------------------------ACTT-A-A--------------ACA-----TGTGTTTGCTT--GCCATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATTCGC---------TGGA-------------ACCCGATGG-CA---A---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCA--------ACSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCTTCAATACACAAGTCAGAATTTGCACCGGTTCACATTGGAGTCAAGGTAAGTTGATCC-AACCACTC--------------------A---------TTACA-----TTTTCCATTTCATCAGTCTACTCCCCG-----------ACATAACTTCCTGTTT------------A------------CCCTTTCC-------CTGTCCTTT-----------------------------------C------------------------AATT-G-C--------------ACA-----TTTGTTTGCTT--GTCAT-GTTAAATAGTAAA-TTAAGAAC--ACTAATGAGAAAATCATGCAAATCTGC---------TCGA-------------AACCGATAA-CA---A---AAAGTCAACAAGTCTG-------------------GCT---------------AAATGTAAATGTAGCTTG---CC-AACSizeHit CountTotal NormTotal
No Reads
droKik1
TTCCTTCAATACACAAAACAGAATTTGCACCGGTTCACATTGGAGTAAAGGTAAGTTGATACTGAACGCTT--------------------A---------TTACA-----TTTAAC----------CATTATC-CAT-----------TATGCCTTGCCTGCTAAATGTACATATATCCTTTTTATAAACCCA---------------------------C-C-------TACAGTCCT------CCCC------------------------ATTT-A-A--------------ACA-----TTTGTTTGCTT--CCTATTATTTAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGCAAATCGACGGGATG---TGGA-------------ACCCGCTGG-CA---G---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCAGTC-AA-AACSizeHit CountTotal NormTotal
No Reads
droAna3
TTCCGTCAATACACAAACCAGAATTCGCATCGGTTCACATTGGAGTTAAGGTGAGT-GATCC-AATCTCGTT--GTAAGACGTGGGTG-----------------------------CCTC----------C------------------------------------------------------------------------------------------------------------------------------------ACATGCCCCAG-CCCCTTCATCGGC-------A-A-----TAAGTCTGC----TTTATTATCT--------ATTGTGCCGC--ATTAATGCGGAAATAATGCAAATTCAC---------T------------------CCAATGC-CA---G---GACGATCAAAATTGGG-------------------GCA------AACTTGT---AATGTAAATTCAACCGA------AAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................TAATGCAAATTCAC---------T------------------CCAATGC-CA---G---GA..............................................................................2711.001100000
.................................................................TCTCGTT--GTAAGACGTGGGTG-----------------------------CC............................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
TACCGTCAATACACAAACCAGAGTTCTCATCGGTGCACATTGGAGTTAAGGTGAGT-GATCC-AATCTCTCTCGGGGGGACATGGGTG------------------------------------TAGTG----------------------------------------------------------------------------------------------------------------------------------------------CCAG-CC-CTTCGTCGGCAATAAGAACG-------------C----TTTATTATCT--------GTTGTGGCGC--ATTAATGCGGAAATAATGCAAATCCAT---------TCCA-------------AGGCCA---------GCCTGA----AGAAATTGGG-------------------GCG------AGATTGTATAAATGTAAATCCAAGCG-----A-AAGSizeHit CountTotal NormTotal
No Reads
droPer2
TTCCTTCACTACACAAAACAGAATTTGCATCGGTTCATATTGGAGTTAAGGTAAGTCTCTAT-CATGTCAC--------------------A---------CCCC----------CCCT----------------CCC-----------TTCGCTTCCC-------------TTCCTTCCCTTTCCTAACT--------------CTTACTCT----GAAAT-C-------TATCATCCTGTGATCCTTT------------------------ATTC-G-A--------------ACTCTTTTTCTGTTTGCTCGCTCGATTATTAAATAGTAAA-TTAAGCGAAAACAAATGCGAAAATCATGCAAAT-------------------------------------GG-CA---A---AAAGTCAACAAGTGGGGGGGGGCGTGGGTGATGGGGCA-----CAAATGCT--AAATGTAAATGTTGCCAGCAACA-AACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TATCTTCAATACATAAATCAGAATTCACACCGGTTCACATTGGAGTTAAGGTAAGGTAA-CA-AAGCTG-------------------------------------TAAATCTAAAGAGG----CAAACTTTAC-AAACGCGCCGCTCCTC----TGTGCTGTGT------------A------------GC-----T-------ATTACTTAAGC-------------------------------GGT-----------ATTT-------AAG-GGGC-A--------------ACA-----TTTGTG----T--TCTATTATTAAATAGTAAA-TTAAGCGC--ATAAATGCGAAAATCATGTAAATCGGCAA-ATCTGCTCAACGACAACCATCCGACCCAATGG-CAAGAG---AAAGTCAACAAGTGTT-------------------GCAAGCGTCAAATGCT--AAATGTAAATGTTGCCAA---CAAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................TTCACACCGGTTCACATTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.......AATACATAAATCAGAATTCACACCGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
droVir3
TACCTTCAATACATAAAACTGAATTCACACCGGTTCACATTGGAGTCAAGGTGAGTTCTACT-AAGCTCT-------------------------------TTAAATAATCCTAATGATGC----------T------------------------------------------------------------------------------------------------------------------------------------ACGAGCGCAAA-GCGC-AAATCGG-------GACA-----CTCGT-TGC----CCCATTATGAAATAGTAAA-TTAAGCGT--ATAAATGCGAATATCATGCAAATCG------------CGA-------------CCTCCGTGGCCA---A---AAAGTCAACAAGTGGG-------------------GCA------AAATGTT--ATATGTAAATGTTGCCGC---TA-AACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................TGAATTCACACCGGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000000002
..............AAAACTGAATTCACACCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................TAAATAATCCTAATGATGC----------T------------------------------------------------------------------------------------------------------------------------------------ACGAGCGC...................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000001000000000000000000000000
...........................CACCGGTTCACATTGGAGTCAAGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.........................CACACCGGTTCACATTGGAGTCAAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
........................................TGGAGTCAAGGTGAGTTCTACT-AAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................ATTCACACCGGTTCACATTGGAGTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
TACCTTCAATACATAAAACTGAATTCACACCGGTTCACATTGGAGTCAAGGTGAGTCTCTT------------------------------ACTAAGCT--C----TATCTC-------------------------T-----------TCTCT---------------------------------------------------CTTACTCA----CACAC-A-------CACACA------CACCTTTATCCCAATAATATTTCGAGTGCGAA-ACAT-AGGCCTT-------TGCG-------CAT-TGC----CTCATTATATAATAGTAAA-TTAAGCTC--ATAAATGCGAATATCATGCAAATCG------------CGA-------------CCTCCGTGGCCA---A---AAAGTCAACAAGTGGA-------------------GCA------AAATGCT--ATATGTAAATGTTGCCGC---TGCCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TAAATTCAATAATAAAAACTGAATTCTCACCGGTTCACATTGGAGTTAAGGTGAGTG-AGAT-GACGACGATGATGACGACGTCGACGTCGACAAAGCTCTCTAAATAAATCTAAT---------------------------------------------------------------------------------------------------------------------------------------------------A-------CAAA-GAGC-A--------------ACA-----CTCGT-TGC----CCCATTATGAAATAGTGAA-TTAAGCGC--ATAAATGCGAATATCATGCAAATCG------------CGA-------------TCCCCATGACCG---A---AAAGTCAACAAGTGGG-------------------GCA------AAATGCT--AAATGTAAATGTTGCCGC---TA-AACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:47 PM