ID:

dsi_18309

 Coordinate:

3r:19677707-19677856 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.9 -34.8 -34.7

Flybase annnotation

intron [3r_19677553_19677676_+]; CDS [3r_19677677_19677706_+]; exon [3r_19677677_19677706_+]; intron [3r_19677707_19678103_+]

No Repeatable elements found

Sense Strand Reads

--------------------##############################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAAATTCTATCCAACTTTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTAGTGGGGCTGCTGCTGTGTTTTTGGCACAGATATTACCGACTCGAAATGAGGGGGGGCCAAAAAAAAAAAAATAGAAAACCGCGTTTGTTTATACGCTTTGTTTTGGTTTTGTTGTTGTTTCTGCTGCCGGCAGCGAACGACGAAAAACCCACTTGTACGTCCGCTTGTCTCAGAGTTGGGAATCAGACTG
**************************************************..........((...((((((((((((((...)))))))......((..(((.....)))..))((((((((.(((..............((((........))))))).)))))))).....((.((....)).)))))))))..))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR1275487
Male larvae		 M053
female body
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
..................................................................................................................................................................TTGGTTTTGTTGTTGTTTCTGCTGCC.............................................................. 26 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...............................................AAGGTGAGTTTTAGTGGGGCT...................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGTTGTTTCTGCTGCC.............................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTTTGTTGTTGTTTCTGCT................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACCCACTTGTACGTCCGCTTG....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGTTTATACGCTTTGTTTTGG.................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................GTCTTGATCCGGGAACTCGAGTT............................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTACGTCCGCTTGTCTCAG................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTTTGTTTTGGTTTTGTTGTTGTTTC..................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................CTTGATCCGGGAACTCGAGGAGACGAA......................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............TGTAGGTCTTGATCCGGGAAC...................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................CGAGGAGAAGAAGGTGAGTTT................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................GTCTTGATCCGGGAACTCGAG................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGAGTTTTAGTGGGGCTGCTT.................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................ATCCGGGAACTCGAGGAGAAG........................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GACTTGGGAATCCGACTG 18 2 6 0.83 5 2 0 0 2 0 0 0 0 1 0 0 0 0
.............ACTTTTGGTTTTGATCCGG.......................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............ACTTTCGGTTTTGATCCG........................................................................................................................................................................................................................... 18 2 9 0.44 4 1 0 0 2 0 0 0 0 0 0 1 0 0
................................GAACTCGAGGAGAAG........................................................................................................................................................................................................... 15 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................TAGGGCTGCTGCTGTATATTT........................................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................AACACCGCGTTTGTT..................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................AGCTGAGTATTAGTAGGGC....................................................................................................................................................................................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............ACTTTCGGTTTTGATCCGGA......................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................TTTTTGGTTTTGTTGCTGTTTC..................................................................... 22 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................GGAACACCGCGTTTGTT..................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................TTAGGGGGGCTGCTCCT................................................................................................................................................................................ 17 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................TGTATACGCTTTGTTT....................................................................................... 16 1 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................TACGCTTTGATTTGG.................................................................................... 15 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................GGCACTCGAGGAGAA............................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TGTTGTTGTTACTGCTGCC.............................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GCTTTGTATTGGTTTT................................................................................ 16 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ATTTAAGATAGGTTGAAATCCAGAACTAGGCCCTTGAGCTCCTCTTCTTCCACTCAAAATCACCCCGACGACGACACAAAAACCGTGTCTATAATGGCTGAGCTTTACTCCCCCCCGGTTTTTTTTTTTTTATCTTTTGGCGCAAACAAATATGCGAAACAAAACCAAAACAACAACAAAGACGACGGCCGTCGCTTGCTGCTTTTTGGGTGAACATGCAGGCGAACAGAGTCTCAACCCTTAGTCTGAC
**************************************************..........((...((((((((((((((...)))))))......((..(((.....)))..))((((((((.(((..............((((........))))))).)))))))).....((.((....)).)))))))))..))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 M024
male body		 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 O001
Testis
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
...........................................................................................................................................................................................................................AGGCGAACAGAGTCTCAACCC.......... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CCGTGTCTATAATGGCTGAGC................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGCGAACAGAGTCTCAA............. 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGCGAACAGAGTCTCAACCCTTA....... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGCGAACAGAGTCTCAACCCTT........ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GAACAGAGTCTCAACCCTTA....... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGGCGAACAGAGTCTC............... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCGAACAGAGTCTCAACCC.......... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTTGGGTGGACATGCAGGCGA......................... 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.........................CTAGGCCCTTGAGCTCCTCTT............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCTTTTTGGGTGAACATGCAG............................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CAGAGTCTCAACCCTTAG...... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CAGGCGAACAGAGTCTCAACC........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGAACATGCAGGCGAACAG..................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GAACAGAGTCTCAACCCTTAG...... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGGGTGAACATGCAGGCGAACAGAGT.................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGGTGAACATGCAGGCGAACAG..................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCGAACAGAGTCTCAACC........... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCGAACAGAGTCTCAACCCTTAGT..... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGGCGAACAGAGTCTCAACC........... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGCGAACAGAGTCTCAAC............ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTGAACATGCAGGCGAAC....................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................GCGAACAGAGTCTCAACCCTT........ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATGCAGGCGAACAGAGTCTCAACCCTTA....... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........GTTGAAATCCAGAACTAGGCC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TGCAGGCGAACAGAGTCTCAAC............ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAACATGCAGGCGAACAG..................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGCTTTTTGGGTGAACATGCAG............................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................GCGCTTGCTGCTTTTTGGGTGAACATGC............................... 28 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................TTTTGGGTGAACATGCAGGCGA......................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GAACAGAGTCTCAACCCT......... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGGCGAACAGAGTCTCAACCCT......... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGGCGAACAGATTCTCAACCCT......... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GCGAACAGAGTCTCAACCCTTA....... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGACGGCCGTCGCTTGCTGCTT.............................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTGGGTGAACATGCAGGCGAACAGA.................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CAGGCGAACAGAGTCTCA.............. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CGCTTGCTGCTTTTTGGGTG...................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................TTTTGGGTGAACATGCAGG............................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................GCAGGCGAACAGAGTCTCAA............. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................TTGCTGCTTTTTGGGTGAACA.................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................TATAATGGCTGAGCTTTACTC............................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................ACCCCGACGACGACACAAAAA........................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TGCAGGCGAACAGAGTCTCAA............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AAACTGTGTCTATACTGG......................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
..........GGTTGAAATCAAGAAC................................................................................................................................................................................................................................ 16 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................TTATTTTGTTTTATCTTTTGGCA............................................................................................................ 23 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................CCGGCGACGACACAAA.......................................................................................................................................................................... 16 1 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................AGCAGCAACAAAGACGACG............................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19677657-19677906 + dsi_18309 TAAA---TTC----T----------ATCCA------------------A--C--TTTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTAGTG--------------GGGCT-GCT--GCTGTGTTTTTGGCA----CAGATATTACCG---------ACTCGAAAT----GAG-----G--------------------------------------------------------------------------------------------------------------------------------------G--------------------GGGGCCA-AAAA-AA--AAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTG
droSec2 scaffold_0:20483838-20484087 + TAAA---TTC----T----------ATCCA------------------A--C--TGTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTAGTG--------------GGGCT-GCT--GCTGTGTTTTTGGTA----CAGATATTACCG---------ACTCGAAAT----GAG-----G-----------------------------------------------------------------------G--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A---AAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTG
dm3 chr3R:20145294-20145541 + TAAA---TTC----T----------ATCCA------------------A--C--TGTAGGTCTTGATCCGGGAACTCGAAGAGAAGAAGGTGAGTTTTGTTG--------------GTGCT-GCA--GCTGTGTTTTTGGCA----CAGATATTTCGG---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A-----AA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTG
droEre2 scaffold_4820:7915187-7915441 - TATA---TTC----C----------ATCCA------------------A--C--TATAGGTTTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTCGCTG--------------GGGCT-GCT--GCTGTGTTTTGGGCA----CAGACATTACCT---------ACTCGCAAT----GAG-----GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-AAAAAAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTATGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAATA-----CCCA----------CT---TGTACGTCCGC-ATGTCTCAGAGTTGGGAATCT-----------GACTG
droYak3 3R:26360147-26360399 - TAAA---TTCC---C----------ATCCA------------------A--C--TGTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTAAGTTTTGATG--------------GAGCT-GCT--GCAGTGTTTTGGGCA----AAGATATTACCG---------ACTCGAAAT----GAG-----GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A---AAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTG
droEug1 scf7180000409798:235364-235601 - CGAT---TTC------------------CA-----ACTTT-----------TATTTTAGGTCTTGATCCGGGAACTCGAAGAGAAAAAGGTGAGTTTTAAGA--------------GGGTT-TCT--G------TTTTGAGA----TATATATTTCTG----------CTCG----------------GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGC-A-AAAA-------AAATAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGTCGACAAA---AGCCCA----------CA---TATACAACCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTG
droBia1 scf7180000302136:506638-506885 + A--A---TTC----C----------ATCCACTTCCACATCTATTCCTCTGCTCTTACAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTAAGTTTTGGTT-----------------T--TT-----------TTCGGGATA--TTTCTTTCATAGTTCCCCTGGGCTC----CGCC-GGG-----GG---------------------------------------------------------------------TG--------------------------------------------------------------G--------------------GGGGGTA-------------AAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTT-----GTTTTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACG--------------------------------ACGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTG
droTak1 scf7180000415769:2286676-2286914 - CAAA---TCCCCTGTTTATTTCC-CAT--------ACTT---------T--TCCTTTAGGTTTTGATCCGCGAGCTCGAGGAGAAGAAGGTGAGTTTTGGT---------------------------------TTTTGGGA----TTTATACTATAGTTGC----GACTCTATAGGCGGGAG-----GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGT-A-------------AAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTT-----GTTTTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACG--------------------------------ACGTCCGC-TTGTCTCAGAGTTGGAAATCG-----------GACTG
droEle1 scf7180000491008:457508-457741 + TCTA---TTCC-----------CCC----------ACGTCCA------T--T-TTTTAGGTTTTGATTCGGGAACTCGAGGAGAAAAAGGTGAGTTTCGGTG--------------GGGTT-G-T--GCGGGG-------GA--TATATAGATTTTTGACCC----GACTCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------GTGACGACAAA----GCCCA----------CC---AATACGTCCGC-TTGTCTGAGAGTTGGAAATCA-----------AACTG
droRho1 scf7180000779477:248413-248646 + TCCA---TTCC-----------CCC----------ACATCCA------T--T-TCTTAGGTTTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTGATG--------------GGGTT--TT--GCGGTGGATT---------TATATATTTCCGACCC----GACTCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------GTGACGACAAA----GCCCA----------CA---AATACGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTG
droFic1 scf7180000453912:1319972-1320212 + GTTC-AATCCC-----------CCCATCCA------------------T--GCGTTTAGGTCCTAATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTTGTT--------------GGGCATTTTTCG------TTGTGGGA------T-----------------------------------------------------------------------------------------ATGTTCTG----------------------------------------------------------------------------------------------------GACTT-GATT-------AAAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTTTGTCGTTGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------GTGACGACAAA----GCCCA----------CAATATATACGTCCGC-GTGTCTCAGAGTTGAAAATCA-----------GACTG
droKik1 scf7180000302387:35129-35357 + CCAT---TC-------------------------------------------CTTACAGGTGTTAATCCGCGAGCTCGAGGAGAAGAAGGTGAGTGG---TT--------------GGGCT----------------------------------------------------------------------------------------------------------------TGGGCAGGCTCTGGGCTTGATTCCTGTGG-------------------------------------------------------------G--------------------GGGGTCG-CA----------AAAAAG----A-AG-------------------C---------GAATCTCTGCAC----CGC----------------GTTTGTTTATATGCTT--TGTTTTCGTTT------TGTTGTTGTTTTTG---------------CT--------GCCGGCAGCGA--------ACGACGACAAA----GCCTA----------CA-----TACGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTG
droAna3 scaffold_13088:183862-184139 + CAAATAATTG----T----------G-------------------------TCTTACAGGTGTTAATCCGCGAGCTTGAACAGAAAAAGGTAAGTGCA--TGGGTAT--------G--GCG------------------------------------------------------T--G--GGGAGCTGGTGGACCG---TCATCATCCCGGGGGAAT--------------------AGGGTCT---------------------------------------------------------------------------------------------------GAGGCCT-GAAA-A------TATAAG--------------------------------------AA------AACCCCGACC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTGTTTCTGCTACTGCTTCT--------GCCGGCAGAGG--------CCGACGACAAA----GCC-CCATGCTCGTACA-TATGTGCGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTG
droBip1 scf7180000396413:238137-238400 + TATG---TG------------------------------------------TCTTACAGGTGTTAATCCGGGAGCTCGAACAGAAGAAGGTAAGTGCA--TG--------------GGGCC------------------------------------------------------T--G--GGG----GGTGGACCGCAGCCATC-TCCCGGGGG-AT--------------------AGGGTCTG--------------------------------------------------------------------------------------------------GAAGCCTTA----------AAAAAAG--------------------------------------AA------AGCCCCAACC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTGTTTCTGCTACTGCTTCT--------GCCGGCAGAGG--------CCGATGACAAA----GCC-CCATGCTCGTACA-TATGTGCGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------AACTG
dp5 2:18667774-18668038 - TGCA---TCCATCGT----------TTGCA------------------A--CCTTACAGGTGTTAATCCAGGAGCTGCAGCAGAAGAATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------ACAGACCTGACGATTCCTGGGT------------------------------------------------------CGCCGCTACAACTGA-----TTTGGG---GCG--------------------GGGGC----------------------------------ATCTCGGT-ATCACGGTTTATGCAAAAACTCTGCCC----TGC----------------GTTTGTTTATATATTTT-TGTTTGGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAACAGAAGCAGCAGCGACA-CAAA----GCCT-------------------ACGTCGGTTTTATATCACAGTT------CA-----------AGCTA
droPer2 scaffold_3:1397946-1398215 - TGCA---TCCATCGT----------TTGCA------------------A--CCTTACAGGTGTTAATCCAGGAGCTGCAGCAGAAGAATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------ACAGACCTGACGATTCCTGGGT------------------------------------------------------CGCCGCTACAACTGA-----TTTGGG---GCG--------------------GGGGC----------------------------------ATCTCGGT-ATCACGGTTTATGCAAAAACTCTGCCC----TGC----------------GTTTGTTTATATATTTT-TGTTTGGGGTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAAGAGAAGCAGCAGCGACA-CAAA----GCCT-------------------ACGTCGGTTTTATATCACAGTTCAA-GCTA-----------TACTG
droWil2 scf2_1100000004943:7153860-7154118 - dwi_3331 TAAA---TTA---------------A--CA------------------T--TCTCACAGGTCCTAGTGCAGGAATTGGAGCAAAAGAAGGTAAGTCAAG-TG----G---------GAG-C-----------------------------------------------------------------------------------------------AC--------------------AAGATCTG---------------------------------------------------------------------------------------------------CAGTTA-GAAAGA------CGTAGGCAAGGGAGGGTACCCTTCGATTACCACC---------GCG------CGC----TGCCTTTGTTGTGTTATTTTTTTGTTTATATATTTTTCGCTGTTGTT-----ATTGTTGATGTTGTTG---------------TT--------GCCGGCC-CAA--------ACGCTGCCTTCTCCATCCGA----------CG------TCGTCTGT-TTATTCCCGAGTTCAAAACCA-----------TACTG
droVir3 scaffold_13047:3475866-3476130 + dvi_15408 TAT------------------------TCA------------------A--T-TTTCAGGTTCTAGTGCAAGAATTAGAACAAAAGAAGGTAAGCATCAGAG--TATTCGTT---T-------TT--G-----------------------------------------------T--T--GTGAGC-------------------------------------------------------------------------------------------CAACGTATTTCAATTGTC--TGA------TTTTTTTTTGTTTTTTGAGGAATTTTCTCTGGTATGCA-ATTTTTA-------------------------------------------------ATGTAGAAACT------CAACAGC----------------GTTTGTTTATATATTT--TGTTTTGGTT-------TGTCGTCGTCGCTGCTGTT---------GTTGTAGC---GCCGGCAGCAG------------------------CCTG----------CA------CCGTCTGC-TTATTTCAGAGTTCAAAGCTA-----------TACTG
droMoj3 scaffold_6540:20487104-20487380 + TATC-------------------------A------------------A--T-TTTCAGGTTCTGGTGCAAGAATTAGAGAAAAAGAAGGTAAGTGTA--T------TTGTG---T------------------------------------------------------------------------------------------------------------------------------------------------GTGTGGGTCGCAGTGAGGTGACGCATTAAACTAA------C------ATGTTTTT-----TCTGAGGACTTGCCTCTGCTTTGCA-ATTTTTA-------------------------------------------------ATGCAGAAACT------CAGAAAC----------------GTTTGTTTATATATAT--TGTTTTGGTTT------TGTCGTCGTCGTTGTT---GGTGTTGTTTTTGTAGCGCAGCCGGCAGCAG------------------------CCTA----------CA------CCGTCTGC-TTATTTCAGAGTTCAAAGCTATACTGAAATTGAACTG
droGri2 scaffold_14906:134446-134732 + CAAA---TAT----T----------A--CA---------------------T-TTTCAGGTACTGATACAAGAATTGGAGCAAAAGAAGGTAAGCATCCATG--TGTTTGTGTATTGTGT---GT--A-----------------------------------------------T--T--GTGGGG-------------------------------------------------------------------------------------------TGACGCATTGCAATAGACACTCC------ATTTTTTTCGT---GTGAGGACTTTCCTCTTGTTTGCA-ATTTTTA-------------------------------------------------ATGCA-AAACT------TGCCAGC----------------GTTTGTTTATATATTT--TGTTTTGGTTT------TCTCGCCATCGCTGCTGCTGCTGTTGTTGTTGTAGCGCAACCGGCAGCAG------------------------CCTA----------CA------CCGTCTGC-TTATTTCAGAGTTCAAAGCTA-----------TACTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAAA---TTC----T----------ATCCA------------------A--C--TTTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTAGTG--------------GGGCT-GCT--GCTGTGTTTTTGGCA----CAGATATTACCG---------ACTCGAAAT----GAG-----G--------------------------------------------------------------------------------------------------------------------------------------G--------------------GGGGCCA-AAAA-AA--AAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCC....................................................................................................2613.00300300000000000000
......................................................................................AAGGTGAGTTTTAGTG--------------GGGCT-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------TGTTGTTGTTTCTG---------------CT--------GCC....................................................................................................2111.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------TGTTGTTGTTTCTG---------------CT--------.......................................................................................................1911.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----CCCA----------CT---TGTACGTCCGC-TTG..................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTATACGCTT--TGTTTTGG.......................................................................................................................................................2111.00100000001000000000
...........................................................GTCTTGATCCGGGAACTCGAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGTCCGC-TTGTCTCAG............................2011.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT--TGTTTTGGTTT------TGTTGTTGTTTC..................................................................................................................................2611.00100000100000000000
............................................................................CGAGGAGAAGAAGGTGAGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...........................................................GTCTTGATCCGGGAACTCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.........................................................................................GTGAGTTTTAGTG--------------GGGCT-GCT--T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.................................................................ATCCGGGAACTCGAGGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.......................................................................GAACTCGAGGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
droSec2
TAAA---TTC----T----------ATCCA------------------A--C--TGTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTAGTG--------------GGGCT-GCT--GCTGTGTTTTTGGTA----CAGATATTACCG---------ACTCGAAAT----GAG-----G-----------------------------------------------------------------------G--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A---AAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTGGTTT------TGTTGTTGTT....................................................................................................................................2112.0022000
..................................................................................................................................................CAGATATTACCG---------ACTCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
....................................................................................AGAAGGTGAGTTTTAGTG--------------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................CGAGGAGAAGAAGGTGAGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTT--TGTTTTGGTTT------TGTTG.........................................................................................................................................2111.0010100
.......................................................GTAGGTCTTGATCCGGGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCTG---------------CT--------GCCGGCAGCGA--------A...................................................................................2411.0010001
.................................................................ATCCGGGAACTCGAGGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
............................................................................................AGTTTTAGTG--------------GGGCT-GCT--GCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----CCCA----------CT---TGTACGTCCGC-TT...................................2111.0010100
......................................................................................................................................................................................................................................................................................................................................................................................A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTT.........................................................................................................................................................................2111.0010100
dm3
TAAA---TTC----T----------ATCCA------------------A--C--TGTAGGTCTTGATCCGGGAACTCGAAGAGAAGAAGGTGAGTTTTGTTG--------------GTGCT-GCA--GCTGTGTTTTTGGCA----CAGATATTTCGG---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A-----AA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................A----CAGATATTTCGG---------ACTCGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................21115.001500000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................AGGTCTTGATCCGGGAACTCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AAGAAGGTGAGTTTTGTTG--------------GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000
.................................................................ATCCGGGAACTCGAAGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTG---------------CT--------GCCGGCAGCGA--------....................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CAGATATTTCGG---------ACTCGAATT----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------TGTTGTTGTTTCTG---------------CT--------GC.....................................................................................................2112.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTCTG---------------CT--------GCCGGCAGCGA--------....................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGTTTTGGTTT------TGTTGTTGT.....................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------CT--------GCCGGCAGCGA--------ACGACGAAAA..........................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TGGCA----CAGATATTTCGG---------ACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................AGAAGGTGAGTTTTGTTG--------------GTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTTCGG---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------...................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TCCGGGAACTCGAAGAGAAGAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GAACTCGAAGAGAAGAAGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACGCTT--TGTTTTGGTTT------T.............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..............................................................................................TTTTGTTG--------------GTGCT-GCA--GCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGTAGGTCTTGATCCGGGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000
...........................................................GTCTTGATCCGGGAACTCGAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
........................................................................................................................................................................CTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A-----................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CGGGAACTCGAAGAGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAGGTGAGTTTTGTTG--------------GTGCT-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACGCTT--TGTTTTGGTTT------..............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
.......................................................................................................................................TTTGGCA----CAGATATTTCGG---------AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GTTG--------------GTGCT-GCA--GCTGTGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGTTTTGGTTT------TGTTGTTG......................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTTT------TGTTGTTGTTTC..................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTT------TGTTGTTGTTTCTG---------------C................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTTTTGGCA----CAGATATTTCGG---------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.............................................................CTTGATCCGGGAACTCGAAGAGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AACTCGAAGAGAAGAAGGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTTCTG---------------CT--------GCCGGCA................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................CA----CAGATATTTCGG---------ACTCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC-TTGTCTCAGAGTTGGGA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................GAAGAAGGTGAGTTTTGTTG--------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGTTTTGGTTT------TGTTGTTG......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCTT--TGTTTTGGTTT------TG............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AA.........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTT--TGTTTTGGTTT------TGTTGT........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................G---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GG.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCC.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA-----CCCA----------CT---TGTACGTCCG.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TCGG---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GT.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTC..............................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGTTT------TGTTGTTGT.....................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTG---------------CT--------GCCGGCAGCGA--------A...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGATCCGGGAACTCGAAGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................GGTGAGTTTTGTTG--------------GTGCT-GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................GGGAACTCGAAGAGAAGAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGAAAAA-----CCCA----------CT---TGT..............................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCA------------------A--C--TGTAGGTCTTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CGG---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGG................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAAAA-----CCCA----------CT---TGTACG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................A---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTT..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------GCCGGCAGCGA--------ACGACGAA............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A-----................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................CTTGATCCGGGAACTCGAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................TGCT-GCA--GCTGTGTTTTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................GTCTTGATCCGGGAACTCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GAACTCGAAGAGAAGAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GGGAACTCGAAGAGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA-----CCCA----------CT---TGTACGTC.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................GGGAACTCGAAGAGAAGAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTG---------------CT--------GCCGGCAGCGA--------AC..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------ACGACGAAAAA-----CCCA----------CT---TG...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TTGGCA----CAGATATTTCGG---------ACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------ACGACGAAAAA-----CCCA----------CT---TGT..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................TGAGTTTTGTTG--------------GTGCT-GCA--GCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTATACGCTT--TGTTTTGGTT.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................................................GGAACTCGAAGAGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................TCCGGGAACTCGAAGAGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................GTGCT-GCA--GCTGTGTTTTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGTCCGC-TTGTCTCAGA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTT--TGTTTTGGTTT------TGTTG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTT------TGTTGTTGTTTCTG---------------C................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGGTCTTGATCCGGGAACTCGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CTTGATCCGGGAACTCGAAGAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CAGATATTTCGG---------ACTCGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................AAA-A-----AA---------A-AT-------------------A---------GAA------AAC----CGC----------------GT...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTTCGG---------ACTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------G..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---TGTACGTCCGC-TTGTCTCC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------CT---TGTACGTCCGC-TTGTCT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC-TTGTCTCAGAGTTGGGAATCA-----------G....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................G--------------GTGCT-GCA--GCTGTGTTTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTC----T----------ATCCA------------------A--C--TGTAGGTCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................GAACTCGAAGAGAAGAAGGTGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................ATCCGGGAACTCGAAGAGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AGATATTTCGG---------ACTCGAATT----G......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----CCCA----------CT---TGTACGTCCGC-T....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTGTTTCTG---------------CT--------GCCGG..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATACGCTT--TGTTTTGGT......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTT.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT--TGTTTTGGTTT------TGTTGTTG......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGC-TTGTCTCAGAGTTGG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---TGTACGTCCGC-TTGTCTC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------A...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCAGCGA--------ACGACGAA............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CTCGAATT----GA-------G---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGC..............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTTT------TGTTGTTGTTTCG.................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................G--------------------GGGGCCA-AAAA-A-----AA---------A-A..................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TATA---TTC----C----------ATCCA------------------A--C--TATAGGTTTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTCGCTG--------------GGGCT-GCT--GCTGTGTTTTGGGCA----CAGACATTACCT---------ACTCGCAAT----GAG-----GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-AAAAAAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTATGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAATA-----CCCA----------CT---TGTACGTCCGC-ATGTCTCAGAGTTGGGAATCT-----------GACTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................TCCGGGAACTCGAGGAGAAGAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000003
......................................................................GGAACTCGAGGAGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................................................................................................................CT-GCT--GCTGTGTTTTGGGCA----C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGC-ATGTCTCAGAGTTGG......................2111.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------CT---TGTACGTCCGC-ATGTCTC..............................2111.0010000100
.................................................................ATCCGGGAACTCGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
............................................................................................................................................................................................................................................................................................................................................................................A---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTT..........................................................................................................................................................................2111.0010000100
droYak3
TAAA---TTCC---C----------ATCCA------------------A--C--TGTAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTAAGTTTTGATG--------------GAGCT-GCT--GCAGTGTTTTGGGCA----AAGATATTACCG---------ACTCGAAAT----GAG-----GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGCCA-AAAA-A---AAAA---------A-AT-------------------A---------GAA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACGAAAAA-----CCCA----------CT---TGTACGTCCGC-TTGTCTCAGAGTTGGGAATCA-----------GACTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................CA------------------A--C--TGTAGGTCTTGATCCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CGAT---TTC------------------CA-----ACTTT-----------TATTTTAGGTCTTGATCCGGGAACTCGAAGAGAAAAAGGTGAGTTTTAAGA--------------GGGTT-TCT--G------TTTTGAGA----TATATATTTCTG----------CTCG----------------GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGC-A-AAAA-------AAATAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGTCGACAAA---AGCCCA----------CA---TATACAACCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTGSizeHit CountTotal NormTotal
No Reads
droBia1
A--A---TTC----C----------ATCCACTTCCACATCTATTCCTCTGCTCTTACAGGTCTTGATCCGGGAACTCGAGGAGAAGAAGGTAAGTTTTGGTT-----------------T--TT-----------TTCGGGATA--TTTCTTTCATAGTTCCCCTGGGCTC----CGCC-GGG-----GG---------------------------------------------------------------------TG--------------------------------------------------------------G--------------------GGGGGTA-------------AAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTT-----GTTTTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACG--------------------------------ACGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTGSizeHit CountTotal NormTotal
No Reads
droTak1
CAAA---TCCCCTGTTTATTTCC-CAT--------ACTT---------T--TCCTTTAGGTTTTGATCCGCGAGCTCGAGGAGAAGAAGGTGAGTTTTGGT---------------------------------TTTTGGGA----TTTATACTATAGTTGC----GACTCTATAGGCGGGAG-----GG---------------------------------------------------------------------AG--------------------------------------------------------------G--------------------GGGGT-A-------------AAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTT-----GTTTTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------ACGACG--------------------------------ACGTCCGC-TTGTCTCAGAGTTGGAAATCG-----------GACTGSizeHit CountTotal NormTotal
No Reads
droEle1
TCTA---TTCC-----------CCC----------ACGTCCA------T--T-TTTTAGGTTTTGATTCGGGAACTCGAGGAGAAAAAGGTGAGTTTCGGTG--------------GGGTT-G-T--GCGGGG-------GA--TATATAGATTTTTGACCC----GACTCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------GTGACGACAAA----GCCCA----------CC---AATACGTCCGC-TTGTCTGAGAGTTGGAAATCA-----------AACTGSizeHit CountTotal NormTotal
No Reads
droRho1
TCCA---TTCC-----------CCC----------ACATCCA------T--T-TCTTAGGTTTTGATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTGATG--------------GGGTT--TT--GCGGTGGATT---------TATATATTTCCGACCC----GACTCGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------GTGACGACAAA----GCCCA----------CA---AATACGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTGSizeHit CountTotal NormTotal
No Reads
droFic1
GTTC-AATCCC-----------CCCATCCA------------------T--GCGTTTAGGTCCTAATCCGGGAACTCGAGGAGAAGAAGGTGAGTTTTTGTT--------------GGGCATTTTTCG------TTGTGGGA------T-----------------------------------------------------------------------------------------ATGTTCTG----------------------------------------------------------------------------------------------------GACTT-GATT-------AAAAAAG--------------------------------------AA------AAC----CGC----------------GTTTGTTTATACGCTT--TGTTTTGGTTTTGTCGTTGTTGTTGTTTCTG---------------CT--------GCCGGCAGCGA--------GTGACGACAAA----GCCCA----------CAATATATACGTCCGC-GTGTCTCAGAGTTGAAAATCA-----------GACTGSizeHit CountTotal NormTotal
No Reads
droKik1
CCAT---TC-------------------------------------------CTTACAGGTGTTAATCCGCGAGCTCGAGGAGAAGAAGGTGAGTGG---TT--------------GGGCT----------------------------------------------------------------------------------------------------------------TGGGCAGGCTCTGGGCTTGATTCCTGTGG-------------------------------------------------------------G--------------------GGGGTCG-CA----------AAAAAG----A-AG-------------------C---------GAATCTCTGCAC----CGC----------------GTTTGTTTATATGCTT--TGTTTTCGTTT------TGTTGTTGTTTTTG---------------CT--------GCCGGCAGCGA--------ACGACGACAAA----GCCTA----------CA-----TACGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTGSizeHit CountTotal NormTotal
No Reads
droAna3
CAAATAATTG----T----------G-------------------------TCTTACAGGTGTTAATCCGCGAGCTTGAACAGAAAAAGGTAAGTGCA--TGGGTAT--------G--GCG------------------------------------------------------T--G--GGGAGCTGGTGGACCG---TCATCATCCCGGGGGAAT--------------------AGGGTCT---------------------------------------------------------------------------------------------------GAGGCCT-GAAA-A------TATAAG--------------------------------------AA------AACCCCGACC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTGTTTCTGCTACTGCTTCT--------GCCGGCAGAGG--------CCGACGACAAA----GCC-CCATGCTCGTACA-TATGTGCGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------GACTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................AATCCGCGAGCTTGAACAGAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................................................GTTAATCCGCGAGCTTGAACAGAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
TATG---TG------------------------------------------TCTTACAGGTGTTAATCCGGGAGCTCGAACAGAAGAAGGTAAGTGCA--TG--------------GGGCC------------------------------------------------------T--G--GGG----GGTGGACCGCAGCCATC-TCCCGGGGG-AT--------------------AGGGTCTG--------------------------------------------------------------------------------------------------GAAGCCTTA----------AAAAAAG--------------------------------------AA------AGCCCCAACC----------------GTTTGTTTATACGCTT--TGTTTTGGTTT------TGTTGTTGTTTCTGTTTCTGCTACTGCTTCT--------GCCGGCAGAGG--------CCGATGACAAA----GCC-CCATGCTCGTACA-TATGTGCGTCCGC-TTGTCTCAGAGTTGGAAATCA-----------AACTGSizeHit CountTotal NormTotal
No Reads
dp5
TGCA---TCCATCGT----------TTGCA------------------A--CCTTACAGGTGTTAATCCAGGAGCTGCAGCAGAAGAATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------ACAGACCTGACGATTCCTGGGT------------------------------------------------------CGCCGCTACAACTGA-----TTTGGG---GCG--------------------GGGGC----------------------------------ATCTCGGT-ATCACGGTTTATGCAAAAACTCTGCCC----TGC----------------GTTTGTTTATATATTTT-TGTTTGGGTTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAACAGAAGCAGCAGCGACA-CAAA----GCCT-------------------ACGTCGGTTTTATATCACAGTT------CA-----------AGCTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTG---------------CT--------GCCGGCAACAGAAGT........................................................................................2211.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................CGGTTTATGCAAAAACTCTGC..........................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................GACGATTCCTGGGT------------------------------------------------------CGCCGC.................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................ACAGACCTGACGATTCCTGG...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................GTTAATCCAGGAGCTGCAGCAGAAGAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
.......................................................ACAGGTGTTAATCCAGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAACAGAAGCAGCAGCG.................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGTTTGGGTTT------TGTTGTTG......................................................................................................................................2011.0010000001000
..........................................................................................................................................................................................................................AGACCTGACGATTCCTGGGT------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................GAATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------AC.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TGTTTGGGTTT------TGTTGT........................................................................................................................................1911.0010100000000
........................................................CAGGTGTTAATCCAGGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACA-CAAA----GCCT-------------------ACGTCGGT......................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTATATATTTT-TGTTTG.........................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTG---------------CT--------GCCGGCAACAGAT..........................................................................................2011.0010100000000
.....................................................................AGGAGCTGCAGCAGAAGAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000001
.......................................................................................ATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------ACAGA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................GTTAATCCAGGAGCTGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
..........................................................GGTGTTAATCCAGGAGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-CAAA----GCCT-------------------ACGTCGGTTTT...................................2211.0010100000000
droPer2
TGCA---TCCATCGT----------TTGCA------------------A--CCTTACAGGTGTTAATCCAGGAGCTGCAGCAGAAGAATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------ACAGACCTGACGATTCCTGGGT------------------------------------------------------CGCCGCTACAACTGA-----TTTGGG---GCG--------------------GGGGC----------------------------------ATCTCGGT-ATCACGGTTTATGCAAAAACTCTGCCC----TGC----------------GTTTGTTTATATATTTT-TGTTTGGGGTT------TGTTGTTGTTTCTG---------------CT--------GCCGGCAAGAGAAGCAGCAGCGACA-CAAA----GCCT-------------------ACGTCGGTTTTATATCACAGTTCAA-GCTA-----------TACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................AGAATGTAAGAG----TG--------------GGGCC-----------------------------------------------------------------------------------------------AC.................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTT------TGTTGTTGTTTC..................................................................................................................................1911.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TGTTTGGGGTT------TGTTGTT.......................................................................................................................................2011.001000001
droWil2
TAAA---TTA---------------A--CA------------------T--TCTCACAGGTCCTAGTGCAGGAATTGGAGCAAAAGAAGGTAAGTCAAG-TG----G---------GAG-C-----------------------------------------------------------------------------------------------AC--------------------AAGATCTG---------------------------------------------------------------------------------------------------CAGTTA-GAAAGA------CGTAGGCAAGGGAGGGTACCCTTCGATTACCACC---------GCG------CGC----TGCCTTTGTTGTGTTATTTTTTTGTTTATATATTTTTCGCTGTTGTT-----ATTGTTGATGTTGTTG---------------TT--------GCCGGCC-CAA--------ACGCTGCCTTCTCCATCCGA----------CG------TCGTCTGT-TTATTCCCGAGTTCAAAACCA-----------TACTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------GCCGGCC-CAA--------ACGCTGCCT...........................................................................2112.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCATCCGA----------CG------TCGTCTGT-.....................................2112.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCATCCGA----------CG------TCGTCTGG-.....................................2111.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG---------------TT--------GCCGGCC-CAA--------ACGCT...............................................................................2111.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGTTGTTG---------------TT--------GCCGGCC-...............................................................................................2111.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCATCCGA----------CG------TCGTCTG.......................................2111.00110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG---------------TT--------GCCGGCC-CAA--------ACGCTG..............................................................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCATCCGA----------CG------TCGTCTG.......................................2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCCATCCGA----------CG------TCGTCT........................................2111.00101000
..............................................................CTAGTGCAGGAATTGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.....................................................................................GAAGGTAAGTCAAG-TG----G---------GAG-C-----------------------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.........................................................................................GTAAGTCAAG-TG----G---------GAG-C-----------------------------------------------------------------------------------------------AC--------------------AA...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................................................................GCAGGAATTGGAGCAAAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
..................................................................................................................................................................................................................................................................................................................................................................AAGA------CGTAGGCAAGGGAGGGTT.............................................................................................................................................................................................................................................2211.00101000
...........................................................................................AAGTCAAG-TG----G---------GAG-C-----------------------------------------------------------------------------------------------AC--------------------AAGA.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTT-----ATTGTTGATGTTGT..................................................................................................................................1940.25101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTT-----ATTGTTGATGTTGTTG---------------.................................................................................................................2240.25100010
droVir3
TAT------------------------TCA------------------A--T-TTTCAGGTTCTAGTGCAAGAATTAGAACAAAAGAAGGTAAGCATCAGAG--TATTCGTT---T-------TT--G-----------------------------------------------T--T--GTGAGC-------------------------------------------------------------------------------------------CAACGTATTTCAATTGTC--TGA------TTTTTTTTTGTTTTTTGAGGAATTTTCTCTGGTATGCA-ATTTTTA-------------------------------------------------ATGTAGAAACT------CAACAGC----------------GTTTGTTTATATATTT--TGTTTTGGTT-------TGTCGTCGTCGCTGCTGTT---------GTTGTAGC---GCCGGCAGCAG------------------------CCTG----------CA------CCGTCTGC-TTATTTCAGAGTTCAAAGCTA-----------TACTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTAGAAACT------CAACAGC----------------GTTT.............................................................................................................................................................................2113.003000000000120000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACGTATTTCAATTGTC--TGA------TT......................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000010000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGTTTTGGTT-------TGTCGTCGTC....................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................GTGAGC-------------------------------------------------------------------------------------------CAACGTATTTCAATT......................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................T--GTGAGC-------------------------------------------------------------------------------------------CAACGTATTTCAAT.......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................GTAAGCATCAGAG--TATTCGTT---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATTTTCTCTGGTATGCA-ATT..............................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................AAAGAAGGTAAGCATCAGAG--TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
TATC-------------------------A------------------A--T-TTTCAGGTTCTGGTGCAAGAATTAGAGAAAAAGAAGGTAAGTGTA--T------TTGTG---T------------------------------------------------------------------------------------------------------------------------------------------------GTGTGGGTCGCAGTGAGGTGACGCATTAAACTAA------C------ATGTTTTT-----TCTGAGGACTTGCCTCTGCTTTGCA-ATTTTTA-------------------------------------------------ATGCAGAAACT------CAGAAAC----------------GTTTGTTTATATATAT--TGTTTTGGTTT------TGTCGTCGTCGTTGTT---GGTGTTGTTTTTGTAGCGCAGCCGGCAGCAG------------------------CCTA----------CA------CCGTCTGC-TTATTTCAGAGTTCAAAGCTATACTGAAATTGAACTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................TGAGGACTTGCCTCTGCTTTG....................................................................................................................................................................................................................................................................................2111.001100000
droGri2
CAAA---TAT----T----------A--CA---------------------T-TTTCAGGTACTGATACAAGAATTGGAGCAAAAGAAGGTAAGCATCCATG--TGTTTGTGTATTGTGT---GT--A-----------------------------------------------T--T--GTGGGG-------------------------------------------------------------------------------------------TGACGCATTGCAATAGACACTCC------ATTTTTTTCGT---GTGAGGACTTTCCTCTTGTTTGCA-ATTTTTA-------------------------------------------------ATGCA-AAACT------TGCCAGC----------------GTTTGTTTATATATTT--TGTTTTGGTTT------TCTCGCCATCGCTGCTGCTGCTGTTGTTGTTGTAGCGCAACCGGCAGCAG------------------------CCTA----------CA------CCGTCTGC-TTATTTCAGAGTTCAAAGCTA-----------TACTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTAGCGCAACCGGCAG...............................................................................................2111.00110
.......................................................................................................................T---GT--A-----------------------------------------------T--T--GTGGGG-------------------------------------------------------------------------------------------TGACGCAT.............................................................................................................................................................................................................................................................................................................................................2011.00110
...........................................................................................................TTGTGTATTGTGT---GT--A-----------------------------------------------T--T--GTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/18/2015 at 11:41 PM